error log file from CI run PR_BUILD_2982

build_upp.log

++ dirname ./build_upp.sh
+ script_dir=.
+ cd .
+ OPTIND=1
+ _opts=
+ getopts :dj:v option
+ case "${option}" in
+ BUILD_JOBS=1
+ getopts :dj:v option
+ shift 2
+ [[ ! -d ../exec ]]
+ cd ufs_model.fd/FV3/upp/tests
+ BUILD_JOBS=1
+ ./compile_upp.sh
Building for machine hercules, compiler intel

Currently Loaded Modules:
  1) intel-oneapi-compilers/2023.1.0  18) netcdf-c/4.9.2
  2) stack-intel/2021.9.0             19) netcdf-fortran/4.6.1
  3) intel-oneapi-mpi/2021.9.0        20) bacio/2.4.1
  4) stack-intel-oneapi-mpi/2021.9.0  21) crtm-fix/2.4.0.1_emc
  5) nghttp2/1.57.0                   22) git-lfs/3.1.2
  6) curl/8.4.0                       23) crtm/2.4.0.1
  7) cmake/3.23.1                     24) g2/3.5.1
  8) sqlite/3.39.4                    25) g2tmpl/1.13.0
  9) python/3.10.8                    26) ip/4.3.0
 10) libjpeg/2.1.0                    27) sp/2.5.0
 11) jasper/2.0.32                    28) w3emc/2.10.0
 12) zlib/1.2.13                      29) nemsio/2.5.4
 13) libpng/1.6.37                    30) sigio/2.3.2
 14) hdf5/1.14.0                      31) wrf-io/1.2.0
 15) snappy/1.1.10                    32) upp_common
 16) zstd/1.5.2                       33) hercules
 17) c-blosc/1.21.5

 

+ BUILD_DIR=build
+ rm -rf build install
+ mkdir -p build
+ cd build
+ cmake -DCMAKE_INSTALL_PREFIX=../install -DBUILD_WITH_NEMSIO=ON -DBUILD_WITH_WRFIO=ON -DBUILD_WITH_GTG=OFF -DBUILD_WITH_IFI=OFF /work2/noaa/global/CI/HERCULES/2982/gefs/sorc/ufs_model.fd/FV3/upp
-- The Fortran compiler identification is Intel 2021.9.0.20230302
-- The C compiler identification is Intel 2021.9.0.20230302
-- The CXX compiler identification is Intel 2021.9.0.20230302
-- Detecting Fortran compiler ABI info
-- Detecting Fortran compiler ABI info - done
-- Check for working Fortran compiler: /apps/spack-managed/oneapi-2023.1.0/intel-oneapi-mpi-2021.9.0-a66eaipzsnyrdgaqzxmqmqz64qzvhkse/mpi/2021.9.0/bin/mpiifort - skipped
-- Detecting C compiler ABI info
-- Detecting C compiler ABI info - done
-- Check for working C compiler: /apps/spack-managed/oneapi-2023.1.0/intel-oneapi-mpi-2021.9.0-a66eaipzsnyrdgaqzxmqmqz64qzvhkse/mpi/2021.9.0/bin/mpiicc - skipped
-- Detecting C compile features
-- Detecting C compile features - done
-- Detecting CXX compiler ABI info
-- Detecting CXX compiler ABI info - done
-- Check for working CXX compiler: /apps/spack-managed/oneapi-2023.1.0/intel-oneapi-mpi-2021.9.0-a66eaipzsnyrdgaqzxmqmqz64qzvhkse/mpi/2021.9.0/bin/mpiicpc - skipped
-- Detecting CXX compile features
-- Detecting CXX compile features - done
-- Setting build type to 'Release' as none was specified.
-- Found MPI_C: /apps/spack-managed/oneapi-2023.1.0/intel-oneapi-mpi-2021.9.0-a66eaipzsnyrdgaqzxmqmqz64qzvhkse/mpi/2021.9.0/bin/mpiicc (found version "3.1") 
-- Found MPI_CXX: /apps/spack-managed/oneapi-2023.1.0/intel-oneapi-mpi-2021.9.0-a66eaipzsnyrdgaqzxmqmqz64qzvhkse/mpi/2021.9.0/bin/mpiicpc (found version "3.1") 
-- Found MPI_Fortran: /apps/spack-managed/oneapi-2023.1.0/intel-oneapi-mpi-2021.9.0-a66eaipzsnyrdgaqzxmqmqz64qzvhkse/mpi/2021.9.0/bin/mpiifort (found version "3.1") 
-- Found MPI: TRUE (found version "3.1")  
-- Found NetCDF: /work/noaa/epic/role-epic/spack-stack/hercules/spack-stack-1.6.0/envs/unified-env/install/intel/2021.9.0/netcdf-c-4.9.2-tslbcfy/include;/work/noaa/epic/role-epic/spack-stack/hercules/spack-stack-1.6.0/envs/unified-env/install/intel/2021.9.0/netcdf-fortran-4.6.1-ndsugbe/include (found version "4.9.2") found components: Fortran 
-- FindNetCDF defines targets:
--   - NetCDF_VERSION [4.9.2]
--   - NetCDF_PARALLEL [TRUE]
--   - NetCDF_C_CONFIG_EXECUTABLE [/work/noaa/epic/role-epic/spack-stack/hercules/spack-stack-1.6.0/envs/unified-env/install/intel/2021.9.0/netcdf-c-4.9.2-tslbcfy/bin/nc-config]
--   - NetCDF::NetCDF_C [SHARED] [Root: /work/noaa/epic/role-epic/spack-stack/hercules/spack-stack-1.6.0/envs/unified-env/install/intel/2021.9.0/netcdf-c-4.9.2-tslbcfy] Lib: /work/noaa/epic/role-epic/spack-stack/hercules/spack-stack-1.6.0/envs/unified-env/install/intel/2021.9.0/netcdf-c-4.9.2-tslbcfy/lib/libnetcdf.so 
--   - NetCDF_Fortran_CONFIG_EXECUTABLE [/work/noaa/epic/role-epic/spack-stack/hercules/spack-stack-1.6.0/envs/unified-env/install/intel/2021.9.0/netcdf-fortran-4.6.1-ndsugbe/bin/nf-config]
--   - NetCDF::NetCDF_Fortran [SHARED] [Root: /work/noaa/epic/role-epic/spack-stack/hercules/spack-stack-1.6.0/envs/unified-env/install/intel/2021.9.0/netcdf-fortran-4.6.1-ndsugbe] Lib: /work/noaa/epic/role-epic/spack-stack/hercules/spack-stack-1.6.0/envs/unified-env/install/intel/2021.9.0/netcdf-fortran-4.6.1-ndsugbe/lib/libnetcdff.so 
-- Found OpenMP_Fortran: -qopenmp (found version "5.0") 
-- Found OpenMP: TRUE (found version "5.0") found components: Fortran 
-- Found bacio: /work/noaa/epic/role-epic/spack-stack/hercules/spack-stack-1.6.0/envs/unified-env/install/intel/2021.9.0/bacio-2.4.1-kocc5wj/lib/libbacio_4.a (found version "2.4.1")
-- Found crtm: /work/noaa/epic/role-epic/spack-stack/hercules/spack-stack-1.6.0/envs/unified-env/install/intel/2021.9.0/crtm-2.4.0.1-wlgbu5r/lib/libcrtm.a (found version "2.4.0")
-- Found ZLIB: /work/noaa/epic/role-epic/spack-stack/hercules/spack-stack-1.6.0/envs/unified-env/install/intel/2021.9.0/zlib-1.2.13-xsm2i7j/lib/libz.so (found version "1.2.13") 
-- Found PNG: /work/noaa/epic/role-epic/spack-stack/hercules/spack-stack-1.6.0/envs/unified-env/install/intel/2021.9.0/libpng-1.6.37-bnpuvlu/lib64/libpng.so (found version "1.6.37") 
-- Found g2: /work/noaa/epic/role-epic/spack-stack/hercules/spack-stack-1.6.0/envs/upp-addon-env/install/intel/2021.9.0/g2-3.5.1-rve3nlh/lib64/libg2_4.a (found version "3.5.1")
-- Found g2tmpl: /work/noaa/epic/role-epic/spack-stack/hercules/spack-stack-1.6.0/envs/upp-addon-env/install/intel/2021.9.0/g2tmpl-1.13.0-ifdzkel/lib64/libg2tmpl.a (found version "1.13.0")
-- Found bacio: /work/noaa/epic/role-epic/spack-stack/hercules/spack-stack-1.6.0/envs/unified-env/install/intel/2021.9.0/bacio-2.4.1-kocc5wj/lib/libbacio_4.a (found version "2.4.1")
-- Found bacio: /work/noaa/epic/role-epic/spack-stack/hercules/spack-stack-1.6.0/envs/unified-env/install/intel/2021.9.0/bacio-2.4.1-kocc5wj/lib/libbacio_4.a (found version "2.4.1")
-- Found w3emc: /work/noaa/epic/role-epic/spack-stack/hercules/spack-stack-1.6.0/envs/unified-env/install/intel/2021.9.0/w3emc-2.10.0-zc33leo/lib64/libw3emc_4.a (found version "2.10.0")
-- Found MPI: TRUE (found version "3.1") found components: Fortran 
-- Found nemsio: /work/noaa/epic/role-epic/spack-stack/hercules/spack-stack-1.6.0/envs/unified-env/install/intel/2021.9.0/nemsio-2.5.4-nxfp7tp/lib64/libnemsio.a (found version "2.5.4")
-- Found sigio: /work/noaa/epic/role-epic/spack-stack/hercules/spack-stack-1.6.0/envs/unified-env/install/intel/2021.9.0/sigio-2.3.2-kesxayk/lib/libsigio.a (found version "2.3.0")
-- Found sp: /work/noaa/epic/role-epic/spack-stack/hercules/spack-stack-1.6.0/envs/unified-env/install/intel/2021.9.0/sp-2.5.0-hidqzcr/lib64/libsp_4.a (found version "2.5.0")
-- Found bacio: /work/noaa/epic/role-epic/spack-stack/hercules/spack-stack-1.6.0/envs/unified-env/install/intel/2021.9.0/bacio-2.4.1-kocc5wj/lib/libbacio_4.a (found version "2.4.1")
-- Found w3emc: /work/noaa/epic/role-epic/spack-stack/hercules/spack-stack-1.6.0/envs/unified-env/install/intel/2021.9.0/w3emc-2.10.0-zc33leo/lib64/libw3emc_4.a (found version "2.10.0")
-- Found wrf_io: /work/noaa/epic/role-epic/spack-stack/hercules/spack-stack-1.6.0/envs/unified-env/install/intel/2021.9.0/wrf-io-1.2.0-xe4onp6/lib/libwrf_io.a (found version "1.2.0")
-- Configuring done
-- Generating done
-- Build files have been written to: /work2/noaa/global/CI/HERCULES/2982/gefs/sorc/ufs_model.fd/FV3/upp/tests/build
+ make -j1
Scanning dependencies of target upp
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ifort: error #10106: Fatal error in /apps/spack-managed/gcc-11.3.1/intel-oneapi-compilers-2023.1.0-sb753366rvywq75zeg4ml5k5c72xgj72/compiler/2023.1.0/linux/bin/intel64/../../bin/intel64/fortcom, terminated by terminate signal
compilation aborted for /work2/noaa/global/CI/HERCULES/2982/gefs/sorc/ufs_model.fd/FV3/upp/sorc/ncep_post.fd/MDL2THANDPV.f (code 1)
make[2]: *** [sorc/ncep_post.fd/CMakeFiles/upp.dir/build.make:1063: sorc/ncep_post.fd/CMakeFiles/upp.dir/MDL2THANDPV.f.o] Error 1
make[1]: *** [CMakeFiles/Makefile2:115: sorc/ncep_post.fd/CMakeFiles/upp.dir/all] Error 2
make: *** [Makefile:136: all] Error 2