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September 7, 2020 09:28
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Python script to extract blood gluscose values to CSV from an Apple healthkit data export.
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## Place the script in th folder with the healthkit export and make sure the export is named eksport.xml | |
# Rum the script in place and wait for the csv to be generated. | |
from xml.etree import ElementTree | |
import os | |
import csv | |
tree = ElementTree.parse("eksport.xml") | |
# Glucose measurements | |
csv_data = open("eksport_bg.csv", "w", newline="", encoding="utf-8") | |
csvWirter = csv.writer(csv_data) | |
root = tree.getroot() | |
for record in root.iter("Record"): | |
if record.attrib["type"] == "HKQuantityTypeIdentifierBloodGlucose": | |
# CSV Format Time, source, value | |
event_data = [ | |
record.attrib["startDate"], | |
record.attrib["sourceName"], | |
record.attrib["value"], | |
] | |
csvWirter.writerow(event_data) | |
# Insulin | |
csv_data = open("eksport_insulin.csv", "w", newline="", encoding="utf-8") | |
csvWirter = csv.writer(csv_data) | |
root = tree.getroot() | |
for record in root.iter("Record"): | |
if record.attrib["type"] == "HKQuantityTypeIdentifierInsulinDelivery": | |
# CSV Format Time, source, value | |
event_data = [ | |
record.attrib["startDate"], | |
record.attrib["sourceName"], | |
record.attrib["value"], | |
] | |
csvWirter.writerow(event_data) | |
# Carbohydrates | |
csv_data = open("eksport_carbohydrates.csv", "w", newline="", encoding="utf-8") | |
csvWirter = csv.writer(csv_data) | |
root = tree.getroot() | |
for record in root.iter("Record"): | |
if record.attrib["type"] == "HKQuantityTypeIdentifierDietaryCarbohydrates": | |
# CSV Format Time, source, value | |
event_data = [ | |
record.attrib["startDate"], | |
record.attrib["sourceName"], | |
record.attrib["value"], | |
] | |
csvWirter.writerow(event_data) | |
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