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ericdill/gist:c75b798e1aef8421fe1d261dac2551f4

Created July 15, 2017 16:57
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gistfile1.txt
{
"cells": [
{
"cell_type": "code",
"execution_count": 45,
"metadata": {},
"outputs": [],
"source": [
"import pandas as pd\n",
"import fnmatch"
]
},
{
"cell_type": "code",
"execution_count": 2,
"metadata": {},
"outputs": [
{
"name": "stdout",
"output_type": "stream",
"text": [
"README.md find_compiled.py osx-64.csv\r\n",
"Untitled.ipynb linux-64.csv win-64.csv\r\n"
]
}
],
"source": [
"ls"
]
},
{
"cell_type": "code",
"execution_count": 83,
"metadata": {
"collapsed": true
},
"outputs": [],
"source": [
"linux = pd.read_csv('linux-64.csv')"
]
},
{
"cell_type": "code",
"execution_count": 84,
"metadata": {
"collapsed": true
},
"outputs": [],
"source": [
"del linux['Unnamed: 0']"
]
},
{
"cell_type": "code",
"execution_count": 85,
"metadata": {},
"outputs": [
{
"data": {
"text/html": [
"<div>\n",
"<style>\n",
" .dataframe thead tr:only-child th {\n",
" text-align: right;\n",
" }\n",
"\n",
" .dataframe thead th {\n",
" text-align: left;\n",
" }\n",
"\n",
" .dataframe tbody tr th {\n",
" vertical-align: top;\n",
" }\n",
"</style>\n",
"<table border=\"1\" class=\"dataframe\">\n",
" <thead>\n",
" <tr style=\"text-align: right;\">\n",
" <th></th>\n",
" <th>ext</th>\n",
" <th>name</th>\n",
" </tr>\n",
" </thead>\n",
" <tbody>\n",
" <tr>\n",
" <th>0</th>\n",
" <td>{'', '.txt', '.py', '.rendered', '.pyc', '.jso...</td>\n",
" <td>pytest-cookies-0.2.0-py34_0.tar.bz2</td>\n",
" </tr>\n",
" <tr>\n",
" <th>1</th>\n",
" <td>{'', '.txt', '.py', '.rendered', '.pyc', '.egg...</td>\n",
" <td>permission-0.4.1-py27_0.tar.bz2</td>\n",
" </tr>\n",
" <tr>\n",
" <th>2</th>\n",
" <td>{'', '.txt', '.py', '.1', '.pyc', '.egg-info',...</td>\n",
" <td>trash-cli-0.17.1.14-py27_0.tar.bz2</td>\n",
" </tr>\n",
" <tr>\n",
" <th>3</th>\n",
" <td>{'', '.txt', '.py', '.pyc', '.json', '.yaml', ...</td>\n",
" <td>pims-0.3.3-py35_1.tar.bz2</td>\n",
" </tr>\n",
" <tr>\n",
" <th>4</th>\n",
" <td>{'', '.txt', '.py', '.pyc', '.json', '.yaml', ...</td>\n",
" <td>extras-1.0.0-py36_0.tar.bz2</td>\n",
" </tr>\n",
" </tbody>\n",
"</table>\n",
"</div>"
],
"text/plain": [
" ext \\\n",
"0 {'', '.txt', '.py', '.rendered', '.pyc', '.jso... \n",
"1 {'', '.txt', '.py', '.rendered', '.pyc', '.egg... \n",
"2 {'', '.txt', '.py', '.1', '.pyc', '.egg-info',... \n",
"3 {'', '.txt', '.py', '.pyc', '.json', '.yaml', ... \n",
"4 {'', '.txt', '.py', '.pyc', '.json', '.yaml', ... \n",
"\n",
" name \n",
"0 pytest-cookies-0.2.0-py34_0.tar.bz2 \n",
"1 permission-0.4.1-py27_0.tar.bz2 \n",
"2 trash-cli-0.17.1.14-py27_0.tar.bz2 \n",
"3 pims-0.3.3-py35_1.tar.bz2 \n",
"4 extras-1.0.0-py36_0.tar.bz2 "
]
},
"execution_count": 85,
"metadata": {},
"output_type": "execute_result"
}
],
"source": [
"linux.head()"
]
},
{
"cell_type": "code",
"execution_count": 86,
"metadata": {
"collapsed": true
},
"outputs": [],
"source": [
"linux['ext'] = linux['ext'].apply(eval)"
]
},
{
"cell_type": "code",
"execution_count": null,
"metadata": {
"collapsed": true
},
"outputs": [],
"source": [
"# Define some common binary extensiosn\n",
"\n",
"bin_extensions = set(['.so', '.pyd', '.dylib', '.exe', '.dll', '.lib', '.a'])"
]
},
{
"cell_type": "code",
"execution_count": 294,
"metadata": {},
"outputs": [],
"source": [
"categorized_extensions = {\n",
" 'numeric': ['.%d' % num for num in range(10)],\n",
" 'web': ['.css', '.css_t', '.html', '.gif', '.js', '.png'],\n",
" 'jupyter': ['.ipynb'],\n",
" 'conda': ['.rendered', '.template', '.yaml', '.bat', '.sh',\n",
" '.tmpl', '.yml'],\n",
" 'other': ['', '.py', '.pyc', '.json', '.json', '.egg-info', \n",
" '.txt', '.pc', '.rst', '.csv', '.ogg', '.test',\n",
" '.conf', '.xsd', '.xml', '.ico', '.map', '.cmd',\n",
" '.svg', '.manifest', '.info', '.bash', '.md',\n",
" '.dat']\n",
"}\n",
"allowed_extensions = set()\n",
"for category, extensions in categorized_extensions.items():\n",
" allowed_extensions.update(extensions)\n"
]
},
{
"cell_type": "code",
"execution_count": 295,
"metadata": {},
"outputs": [],
"source": [
"linux['compiled'] = linux['ext'].apply(lambda extensions: any(ext in extensions for ext in bin_extensions))\n",
"linux['pure'] = linux['ext'].apply(lambda extensions: extensions <= allowed_extensions)\n",
"linux['neither'] = ~linux['pure'] & ~linux['compiled']"
]
},
{
"cell_type": "code",
"execution_count": 296,
"metadata": {},
"outputs": [
{
"name": "stdout",
"output_type": "stream",
"text": [
"compiled: 8886\n",
"pure: 8390\n",
"neither: 3700\n",
"20976 20976\n"
]
}
],
"source": [
"total = 0\n",
"for col in ['compiled', 'pure', 'neither']:\n",
" subset = linux[linux[col] == True]\n",
" print('%s: %s' % (col, len(subset)))\n",
" total += len(subset)\n",
"print(total, len(linux))"
]
},
{
"cell_type": "code",
"execution_count": 297,
"metadata": {},
"outputs": [
{
"name": "stdout",
"output_type": "stream",
"text": [
"jupyterlab-0.13.1-py35_1.tar.bz2\n",
"\t{'.eot', '.woff', '.ttf', '.ts', '.woff2'}\n",
"jupyterlab-0.13.2-py35_1.tar.bz2\n",
"\t{'.eot', '.woff', '.ttf', '.ts', '.woff2'}\n",
"sphinx-1.6.3-py27_0.tar.bz2\n",
"\t{'.opf_t', '.mo', '.js_t', '.sty', '.pot', '.ncx_t', '.po', '.xhtml_t', '.bat_t', '.cls', '.c', '.ist', '.pyx', '.py_t', '.new_t', '.rst_t', '.pickle', '.tex_t'}\n",
"pagmo-2.4-0.tar.bz2\n",
"\t{'.cmake', '.hpp', '.h'}\n",
"graph-1.11-0.tar.bz2\n",
"\t{'.hxx', '.diff'}\n",
"iris-grib-0.10.1-py27_0.tar.bz2\n",
"\t{'.cml'}\n",
"iris-1.12.0-py27_2.tar.bz2\n",
"\t{'.LESSER', '.patch', '.krb', '.cfg'}\n",
"compliance-checker-2.3.1-py34_0.tar.bz2\n",
"\t{'.nc', '.j2', '.cdl'}\n",
"alembic-0.8.10-py35_1.tar.bz2\n",
"\t{'.mako'}\n",
"glymur-0.8.4-py35_0.tar.bz2\n",
"\t{'.tif', '.jpx', '.jp2', '.j2k'}\n"
]
}
],
"source": [
"neither = linux[linux['neither'] == True]\n",
"\n",
"for name, ext in zip(neither['name'].values[:10], neither['ext'].values[:10]):\n",
" print(name)\n",
" print('\\t%s' % ext.difference(allowed_extensions))\n"
]
},
{
"cell_type": "code",
"execution_count": 298,
"metadata": {},
"outputs": [
{
"data": {
"text/plain": [
"{'.eot', '.ts', '.ttf', '.woff', '.woff2'}"
]
},
"execution_count": 298,
"metadata": {},
"output_type": "execute_result"
}
],
"source": [
"neither['ext'].values[1].difference(allowed_extensions)"
]
},
{
"cell_type": "code",
"execution_count": 218,
"metadata": {},
"outputs": [
{
"data": {
"text/plain": [
"'librosa-0.5.0rc0-py34_0.tar.bz2'"
]
},
"execution_count": 218,
"metadata": {},
"output_type": "execute_result"
}
],
"source": [
"neither['name'].values[1]"
]
},
{
"cell_type": "code",
"execution_count": 197,
"metadata": {},
"outputs": [
{
"data": {
"text/plain": [
"{'',\n",
" '.0',\n",
" '.1',\n",
" '.2',\n",
" '.3',\n",
" '.4',\n",
" '.5',\n",
" '.6',\n",
" '.7',\n",
" '.8',\n",
" '.9',\n",
" '.bat',\n",
" '.css',\n",
" '.egg-info',\n",
" '.gif',\n",
" '.html',\n",
" '.ipynb',\n",
" '.js',\n",
" '.json',\n",
" '.png',\n",
" '.py',\n",
" '.pyc',\n",
" '.rendered',\n",
" '.sh',\n",
" '.template',\n",
" '.tmpl',\n",
" '.txt',\n",
" '.yaml',\n",
" '.yml'}"
]
},
"execution_count": 197,
"metadata": {},
"output_type": "execute_result"
}
],
"source": [
"allowed_extensions.difference()"
]
},
{
"cell_type": "code",
"execution_count": 96,
"metadata": {},
"outputs": [
{
"data": {
"text/html": [
"<div>\n",
"<style>\n",
" .dataframe thead tr:only-child th {\n",
" text-align: right;\n",
" }\n",
"\n",
" .dataframe thead th {\n",
" text-align: left;\n",
" }\n",
"\n",
" .dataframe tbody tr th {\n",
" vertical-align: top;\n",
" }\n",
"</style>\n",
"<table border=\"1\" class=\"dataframe\">\n",
" <thead>\n",
" <tr style=\"text-align: right;\">\n",
" <th></th>\n",
" <th>ext</th>\n",
" <th>name</th>\n",
" <th>compiled</th>\n",
" <th>pure</th>\n",
" </tr>\n",
" </thead>\n",
" <tbody>\n",
" <tr>\n",
" <th>0</th>\n",
" <td>{, .rendered, .yaml, .pyc, .py, .txt, .json}</td>\n",
" <td>pytest-cookies-0.2.0-py34_0.tar.bz2</td>\n",
" <td>False</td>\n",
" <td>True</td>\n",
" </tr>\n",
" <tr>\n",
" <th>1</th>\n",
" <td>{, .rendered, .egg-info, .yaml, .pyc, .py, .tx...</td>\n",
" <td>permission-0.4.1-py27_0.tar.bz2</td>\n",
" <td>False</td>\n",
" <td>False</td>\n",
" </tr>\n",
" <tr>\n",
" <th>2</th>\n",
" <td>{, .egg-info, .yaml, .1, .template, .pyc, .py,...</td>\n",
" <td>trash-cli-0.17.1.14-py27_0.tar.bz2</td>\n",
" <td>False</td>\n",
" <td>False</td>\n",
" </tr>\n",
" <tr>\n",
" <th>3</th>\n",
" <td>{, .yaml, .template, .pyc, .py, .json, .txt}</td>\n",
" <td>pims-0.3.3-py35_1.tar.bz2</td>\n",
" <td>False</td>\n",
" <td>False</td>\n",
" </tr>\n",
" <tr>\n",
" <th>4</th>\n",
" <td>{, .yaml, .template, .pyc, .py, .json, .txt}</td>\n",
" <td>extras-1.0.0-py36_0.tar.bz2</td>\n",
" <td>False</td>\n",
" <td>False</td>\n",
" </tr>\n",
" </tbody>\n",
"</table>\n",
"</div>"
],
"text/plain": [
" ext \\\n",
"0 {, .rendered, .yaml, .pyc, .py, .txt, .json} \n",
"1 {, .rendered, .egg-info, .yaml, .pyc, .py, .tx... \n",
"2 {, .egg-info, .yaml, .1, .template, .pyc, .py,... \n",
"3 {, .yaml, .template, .pyc, .py, .json, .txt} \n",
"4 {, .yaml, .template, .pyc, .py, .json, .txt} \n",
"\n",
" name compiled pure \n",
"0 pytest-cookies-0.2.0-py34_0.tar.bz2 False True \n",
"1 permission-0.4.1-py27_0.tar.bz2 False False \n",
"2 trash-cli-0.17.1.14-py27_0.tar.bz2 False False \n",
"3 pims-0.3.3-py35_1.tar.bz2 False False \n",
"4 extras-1.0.0-py36_0.tar.bz2 False False "
]
},
"execution_count": 96,
"metadata": {},
"output_type": "execute_result"
}
],
"source": [
"neither.head()"
]
},
{
"cell_type": "code",
"execution_count": 93,
"metadata": {},
"outputs": [
{
"data": {
"text/plain": [
"20976"
]
},
"execution_count": 93,
"metadata": {},
"output_type": "execute_result"
}
],
"source": [
"len(neither)"
]
},
{
"cell_type": "code",
"execution_count": 73,
"metadata": {},
"outputs": [
{
"data": {
"text/plain": [
"5 True\n",
"27 True\n",
"30 True\n",
"33 True\n",
"34 True\n",
"35 True\n",
"45 True\n",
"46 True\n",
"49 True\n",
"52 True\n",
"56 True\n",
"59 True\n",
"63 True\n",
"66 True\n",
"67 True\n",
"70 True\n",
"71 True\n",
"72 True\n",
"75 True\n",
"77 True\n",
"78 True\n",
"85 True\n",
"86 True\n",
"91 True\n",
"93 True\n",
"94 True\n",
"96 True\n",
"99 True\n",
"100 True\n",
"102 True\n",
" ... \n",
"20916 True\n",
"20920 True\n",
"20921 True\n",
"20922 True\n",
"20927 True\n",
"20929 True\n",
"20930 True\n",
"20931 True\n",
"20932 True\n",
"20934 True\n",
"20936 True\n",
"20937 True\n",
"20939 True\n",
"20941 True\n",
"20942 True\n",
"20947 True\n",
"20957 True\n",
"20958 True\n",
"20961 True\n",
"20963 True\n",
"20964 True\n",
"20965 True\n",
"20967 True\n",
"20968 True\n",
"20969 True\n",
"20970 True\n",
"20972 True\n",
"20973 True\n",
"20974 True\n",
"20975 True\n",
"Name: compiled, Length: 8987, dtype: bool"
]
},
"execution_count": 73,
"metadata": {},
"output_type": "execute_result"
}
],
"source": [
"linux['compiled'][linux['compiled'] == True]"
]
},
{
"cell_type": "code",
"execution_count": 47,
"metadata": {},
"outputs": [
{
"ename": "TypeError",
"evalue": "expected str, bytes or os.PathLike object, not list",
"output_type": "error",
"traceback": [
"\u001b[0;31m---------------------------------------------------------------------------\u001b[0m",
"\u001b[0;31mTypeError\u001b[0m Traceback (most recent call last)",
"\u001b[0;32m<ipython-input-47-bebe7562194d>\u001b[0m in \u001b[0;36m<module>\u001b[0;34m()\u001b[0m\n\u001b[0;32m----> 1\u001b[0;31m \u001b[0mfnmatch\u001b[0m\u001b[0;34m.\u001b[0m\u001b[0mfilter\u001b[0m\u001b[0;34m(\u001b[0m\u001b[0mall_extensions\u001b[0m\u001b[0;34m,\u001b[0m \u001b[0mbin_extensions\u001b[0m\u001b[0;34m)\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[0m",
"\u001b[0;32m~/miniconda/lib/python3.6/fnmatch.py\u001b[0m in \u001b[0;36mfilter\u001b[0;34m(names, pat)\u001b[0m\n\u001b[1;32m 49\u001b[0m \u001b[0;34m\"\"\"Return the subset of the list NAMES that match PAT.\"\"\"\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[1;32m 50\u001b[0m \u001b[0mresult\u001b[0m \u001b[0;34m=\u001b[0m \u001b[0;34m[\u001b[0m\u001b[0;34m]\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[0;32m---> 51\u001b[0;31m \u001b[0mpat\u001b[0m \u001b[0;34m=\u001b[0m \u001b[0mos\u001b[0m\u001b[0;34m.\u001b[0m\u001b[0mpath\u001b[0m\u001b[0;34m.\u001b[0m\u001b[0mnormcase\u001b[0m\u001b[0;34m(\u001b[0m\u001b[0mpat\u001b[0m\u001b[0;34m)\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[0m\u001b[1;32m 52\u001b[0m \u001b[0mmatch\u001b[0m \u001b[0;34m=\u001b[0m \u001b[0m_compile_pattern\u001b[0m\u001b[0;34m(\u001b[0m\u001b[0mpat\u001b[0m\u001b[0;34m)\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[1;32m 53\u001b[0m \u001b[0;32mif\u001b[0m \u001b[0mos\u001b[0m\u001b[0;34m.\u001b[0m\u001b[0mpath\u001b[0m \u001b[0;32mis\u001b[0m \u001b[0mposixpath\u001b[0m\u001b[0;34m:\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n",
"\u001b[0;32m~/miniconda/lib/python3.6/posixpath.py\u001b[0m in \u001b[0;36mnormcase\u001b[0;34m(s)\u001b[0m\n\u001b[1;32m 50\u001b[0m \u001b[0;32mdef\u001b[0m \u001b[0mnormcase\u001b[0m\u001b[0;34m(\u001b[0m\u001b[0ms\u001b[0m\u001b[0;34m)\u001b[0m\u001b[0;34m:\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[1;32m 51\u001b[0m \u001b[0;34m\"\"\"Normalize case of pathname. Has no effect under Posix\"\"\"\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[0;32m---> 52\u001b[0;31m \u001b[0ms\u001b[0m \u001b[0;34m=\u001b[0m \u001b[0mos\u001b[0m\u001b[0;34m.\u001b[0m\u001b[0mfspath\u001b[0m\u001b[0;34m(\u001b[0m\u001b[0ms\u001b[0m\u001b[0;34m)\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[0m\u001b[1;32m 53\u001b[0m \u001b[0;32mif\u001b[0m \u001b[0;32mnot\u001b[0m \u001b[0misinstance\u001b[0m\u001b[0;34m(\u001b[0m\u001b[0ms\u001b[0m\u001b[0;34m,\u001b[0m \u001b[0;34m(\u001b[0m\u001b[0mbytes\u001b[0m\u001b[0;34m,\u001b[0m \u001b[0mstr\u001b[0m\u001b[0;34m)\u001b[0m\u001b[0;34m)\u001b[0m\u001b[0;34m:\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[1;32m 54\u001b[0m raise TypeError(\"normcase() argument must be str or bytes, \"\n",
"\u001b[0;31mTypeError\u001b[0m: expected str, bytes or os.PathLike object, not list"
]
}
],
"source": [
"fnmatch.filter(all_extensions, bin_extensions)"
]
},
{
"cell_type": "code",
"execution_count": 37,
"metadata": {
"scrolled": false
},
"outputs": [
{
"data": {
"text/plain": [
"['',\n",
" '.0',\n",
" '.0-deps',\n",
" '.0-no-ofed',\n",
" '.0-no-ofed-brokenblacs',\n",
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" '.0-rc3',\n",
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" '.rb',\n",
" '.rc',\n",
" '.rd',\n",
" '.rda',\n",
" '.rdata',\n",
" '.rdb',\n",
" '.rdoc',\n",
" '.rds',\n",
" '.rdx',\n",
" '.re',\n",
" '.readme',\n",
" '.rec',\n",
" '.ref',\n",
" '.refresp',\n",
" '.regex',\n",
" '.rel',\n",
" '.remark',\n",
" '.rendered',\n",
" '.repository',\n",
" '.res',\n",
" '.resp',\n",
" '.resu',\n",
" '.rev',\n",
" '.rgb',\n",
" '.rgba',\n",
" '.rhtml',\n",
" '.rle',\n",
" '.rm',\n",
" '.rmd',\n",
" '.rms',\n",
" '.rnc',\n",
" '.rng',\n",
" '.rnw',\n",
" '.ro',\n",
" '.rockspec',\n",
" '.roi',\n",
" ...]"
]
},
"execution_count": 37,
"metadata": {},
"output_type": "execute_result"
}
],
"source": [
"sorted(all_extensions)"
]
},
{
"cell_type": "code",
"execution_count": null,
"metadata": {
"collapsed": true
},
"outputs": [],
"source": []
}
],
"metadata": {
"kernelspec": {
"display_name": "Python 3",
"language": "python",
"name": "python3"
},
"language_info": {
"codemirror_mode": {
"name": "ipython",
"version": 3
},
"file_extension": ".py",
"mimetype": "text/x-python",
"name": "python",
"nbconvert_exporter": "python",
"pygments_lexer": "ipython3",
"version": "3.6.1"
}
},
"nbformat": 4,
"nbformat_minor": 2
}
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