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using ggplot2 in python
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from rpy2.robjects.packages import importr | |
import rpy2.robjects.lib.ggplot2 as ggplot2 # don't use importr cause the ggplot2 here has the .plot() function | |
grdevices = importr('grDevices') | |
cowplot = importr('cowplot') #cause i love cowplot | |
rfeather = importr("feather", on_conflict="warn") | |
# Out[57]: | |
# country variable value | |
# 0 H random 15.872105 | |
# 1 J random 24.370636 | |
# 2 M random 1.015055 | |
# 3 P random 11.118215 | |
# 4 S random 0.885525 | |
# 5 T random 0.882241 | |
# 6 T random 1.093211 | |
# 7 H svd 11.544371 | |
# 8 J svd 0.647587 | |
# 9 M svd 0.706966 | |
# 10 P svd 7.971626 | |
# 11 S svd 0.569839 | |
# 12 T svd 0.588953 | |
# 13 T svd 0.802850 | |
write_dataframe(rmseDF, "temp.feather") | |
rmseDF_r = rfeather.read_feather("temp.feather") | |
grdevices.pdf(file="histo.pdf", width=10, height=10) | |
pp = ggplot2.ggplot(rmseDF_r) + \ | |
ggplot2.aes_string(x='variable', y='value', fill='variable') + \ | |
ggplot2.geom_histogram(stat="identity") + \ | |
ggplot2.facet_wrap("country", scale="free") + \ | |
ggplot2.theme_cowplot() | |
pp.plot() | |
grdevices.dev_off() |
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pandas2ri.py2ri
function converts the types weirdly, recommended to usefeather
.dun using importr("ggplot2") the the
pp.plot()
function is in the ggplot2 object. (but its a wrapper written by the rpy2 guys)