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May 4, 2016 16:09
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| digraph graphname { | |
| Primer3; | |
| Java; | |
| RNAz; | |
| HPCBIOS_Bioinfo; | |
| MUMmer; | |
| MrBayes; | |
| libxml2; | |
| expat; | |
| FSL; | |
| Mothur; | |
| Perl; | |
| ant; | |
| PAML; | |
| GLIMMER; | |
| libxslt; | |
| BamTools; | |
| Boost; | |
| Infernal; | |
| BioPerl; | |
| biodeps; | |
| "ALLPATHS-LG"; | |
| BFAST; | |
| hwloc; | |
| tbb; | |
| "FASTX-Toolkit"; | |
| gompi; | |
| libreadline; | |
| ScaLAPACK; | |
| ViennaRNA; | |
| BWA; | |
| EMBOSS; | |
| Trinity; | |
| libpng; | |
| ClustalW2; | |
| numpy; | |
| Velvet; | |
| Bowtie2; | |
| MEME; | |
| SAMtools; | |
| NEURON; | |
| Oases; | |
| GROMACS; | |
| RAxML; | |
| ncurses; | |
| FFTW; | |
| bzip2; | |
| goolf; | |
| SHRiMP; | |
| libharu; | |
| MetaVelvet; | |
| libgtextutils; | |
| SOAPdenovo; | |
| "BLAST+"; | |
| GCC; | |
| AMOS; | |
| Cufflinks; | |
| "HH-suite"; | |
| Pasha; | |
| FASTA; | |
| MCL; | |
| CMake; | |
| Eigen; | |
| Biopython; | |
| OpenBLAS; | |
| zlib; | |
| bam2fastq; | |
| HMMER; | |
| Python; | |
| OpenMPI; | |
| gzip; | |
| mpiBLAST; | |
| JUnit; | |
| Primer3 -> goolf; | |
| RNAz -> goolf; | |
| HPCBIOS_Bioinfo -> "ALLPATHS-LG"; | |
| HPCBIOS_Bioinfo -> AMOS; | |
| HPCBIOS_Bioinfo -> BFAST; | |
| HPCBIOS_Bioinfo -> "BLAST+"; | |
| HPCBIOS_Bioinfo -> BWA; | |
| HPCBIOS_Bioinfo -> BamTools; | |
| HPCBIOS_Bioinfo -> BioPerl; | |
| HPCBIOS_Bioinfo -> Biopython; | |
| HPCBIOS_Bioinfo -> Bowtie2; | |
| HPCBIOS_Bioinfo -> bam2fastq; | |
| HPCBIOS_Bioinfo -> biodeps; | |
| HPCBIOS_Bioinfo -> ClustalW2; | |
| HPCBIOS_Bioinfo -> Cufflinks; | |
| HPCBIOS_Bioinfo -> EMBOSS; | |
| HPCBIOS_Bioinfo -> FASTA; | |
| HPCBIOS_Bioinfo -> "FASTX-Toolkit"; | |
| HPCBIOS_Bioinfo -> FSL; | |
| HPCBIOS_Bioinfo -> GLIMMER; | |
| HPCBIOS_Bioinfo -> GROMACS; | |
| HPCBIOS_Bioinfo -> "HH-suite"; | |
| HPCBIOS_Bioinfo -> HMMER; | |
| HPCBIOS_Bioinfo -> Infernal; | |
| HPCBIOS_Bioinfo -> libgtextutils; | |
| HPCBIOS_Bioinfo -> libharu; | |
| HPCBIOS_Bioinfo -> MCL; | |
| HPCBIOS_Bioinfo -> MEME; | |
| HPCBIOS_Bioinfo -> MUMmer; | |
| HPCBIOS_Bioinfo -> MetaVelvet; | |
| HPCBIOS_Bioinfo -> Mothur; | |
| HPCBIOS_Bioinfo -> MrBayes; | |
| HPCBIOS_Bioinfo -> mpiBLAST; | |
| HPCBIOS_Bioinfo -> NEURON; | |
| HPCBIOS_Bioinfo -> Oases; | |
| HPCBIOS_Bioinfo -> PAML; | |
| HPCBIOS_Bioinfo -> Pasha; | |
| HPCBIOS_Bioinfo -> Primer3; | |
| HPCBIOS_Bioinfo -> RAxML; | |
| HPCBIOS_Bioinfo -> RNAz; | |
| HPCBIOS_Bioinfo -> SAMtools; | |
| HPCBIOS_Bioinfo -> SHRiMP; | |
| HPCBIOS_Bioinfo -> SOAPdenovo; | |
| HPCBIOS_Bioinfo -> Trinity; | |
| HPCBIOS_Bioinfo -> Velvet; | |
| HPCBIOS_Bioinfo -> ViennaRNA; | |
| HPCBIOS_Bioinfo -> goolf; | |
| MUMmer -> goolf; | |
| MrBayes -> libreadline; | |
| MrBayes -> ncurses; | |
| MrBayes -> goolf; | |
| libxml2 -> zlib; | |
| libxml2 -> goolf; | |
| expat -> goolf; | |
| FSL -> goolf; | |
| Mothur -> libreadline; | |
| Mothur -> ncurses; | |
| Mothur -> bzip2; | |
| Mothur -> gzip; | |
| Mothur -> goolf; | |
| Perl -> goolf; | |
| ant -> Java; | |
| ant -> JUnit [color=blue, style=dotted, arrowhead=diamond]; | |
| PAML -> goolf; | |
| GLIMMER -> goolf; | |
| libxslt -> zlib; | |
| libxslt -> libxml2; | |
| libxslt -> goolf; | |
| BamTools -> CMake [color=blue, style=dotted, arrowhead=diamond]; | |
| BamTools -> goolf; | |
| Boost -> bzip2; | |
| Boost -> Python; | |
| Boost -> goolf; | |
| Infernal -> goolf; | |
| BioPerl -> Perl; | |
| BioPerl -> goolf; | |
| biodeps -> bzip2; | |
| biodeps -> zlib; | |
| biodeps -> libreadline; | |
| biodeps -> ncurses; | |
| biodeps -> goolf; | |
| "ALLPATHS-LG" -> goolf; | |
| BFAST -> bzip2; | |
| BFAST -> goolf; | |
| hwloc -> GCC; | |
| "FASTX-Toolkit" -> libgtextutils; | |
| "FASTX-Toolkit" -> goolf; | |
| gompi -> GCC; | |
| gompi -> OpenMPI; | |
| libreadline -> ncurses; | |
| libreadline -> goolf; | |
| ScaLAPACK -> OpenBLAS; | |
| ScaLAPACK -> gompi; | |
| ViennaRNA -> goolf; | |
| BWA -> goolf; | |
| EMBOSS -> libharu; | |
| EMBOSS -> Java; | |
| EMBOSS -> goolf; | |
| Trinity -> Java; | |
| Trinity -> ant; | |
| Trinity -> ncurses; | |
| Trinity -> zlib; | |
| Trinity -> goolf; | |
| libpng -> zlib; | |
| libpng -> goolf; | |
| ClustalW2 -> goolf; | |
| numpy -> Python; | |
| numpy -> goolf; | |
| Velvet -> goolf; | |
| Bowtie2 -> goolf; | |
| MEME -> libxml2; | |
| MEME -> libxslt; | |
| MEME -> zlib; | |
| MEME -> goolf; | |
| SAMtools -> ncurses; | |
| SAMtools -> zlib; | |
| SAMtools -> goolf; | |
| NEURON -> libreadline; | |
| NEURON -> ncurses; | |
| NEURON -> Python; | |
| NEURON -> goolf; | |
| Oases -> goolf; | |
| GROMACS -> CMake [color=blue, style=dotted, arrowhead=diamond]; | |
| GROMACS -> goolf; | |
| RAxML -> goolf; | |
| ncurses -> goolf; | |
| FFTW -> gompi; | |
| bzip2 -> goolf; | |
| goolf -> GCC; | |
| goolf -> OpenMPI; | |
| goolf -> OpenBLAS; | |
| goolf -> FFTW; | |
| goolf -> ScaLAPACK; | |
| SHRiMP -> goolf; | |
| libharu -> libpng; | |
| libharu -> CMake [color=blue, style=dotted, arrowhead=diamond]; | |
| libharu -> goolf; | |
| MetaVelvet -> Velvet; | |
| MetaVelvet -> goolf; | |
| libgtextutils -> goolf; | |
| SOAPdenovo -> goolf; | |
| "BLAST+" -> Boost; | |
| "BLAST+" -> goolf; | |
| AMOS -> expat; | |
| AMOS -> MUMmer; | |
| AMOS -> goolf; | |
| Cufflinks -> Boost; | |
| Cufflinks -> SAMtools; | |
| Cufflinks -> Eigen; | |
| Cufflinks -> zlib; | |
| Cufflinks -> goolf; | |
| "HH-suite" -> goolf; | |
| Pasha -> tbb; | |
| Pasha -> goolf; | |
| FASTA -> goolf; | |
| MCL -> goolf; | |
| CMake -> ncurses; | |
| CMake -> goolf; | |
| Eigen -> goolf; | |
| Biopython -> Python; | |
| Biopython -> numpy; | |
| Biopython -> goolf; | |
| OpenBLAS -> gompi; | |
| zlib -> goolf; | |
| bam2fastq -> zlib; | |
| bam2fastq -> goolf; | |
| HMMER -> goolf; | |
| Python -> bzip2; | |
| Python -> zlib; | |
| Python -> libreadline; | |
| Python -> ncurses; | |
| Python -> goolf; | |
| OpenMPI -> hwloc; | |
| OpenMPI -> GCC; | |
| gzip -> goolf; | |
| mpiBLAST -> goolf; | |
| JUnit -> Java; | |
| } |
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