Created
March 6, 2015 09:44
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ADN image reader, transciptor in python for Belgian CyberSecurity Challenge
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import cv2 | |
img = cv2.imread("image_oversaturated.jpg") | |
permut = [ | |
{"r":"A", "g":"U", "y":"C", "b":"G"}, | |
{"r":"U", "g":"A", "y":"C", "b":"G"}, | |
{"r":"A", "g":"U", "y":"G", "b":"C"}, | |
{"r":"U", "g":"A", "y":"G", "b":"C"} | |
] | |
for permutation in permut: | |
y = 11 #y+=28 | |
sequence = "" | |
while y < 840: | |
x = 10 | |
while x < 570: | |
color = img[y][x] | |
if color[0] > 230: # blue | |
sequence += permutation["b"] | |
elif color[1] > 230: # green, present in green and yellow | |
if color[2] > 230: # yellow | |
sequence += permutation["y"] | |
else: # green | |
sequence += permutation["g"] | |
elif color[2] > 230: | |
sequence += permutation["r"] | |
x+=19 | |
y+=28 | |
print sequence | |
aa = {"UUU":"F", "UUC":"F", "UUA":"L", "UUG":"L", | |
"UCU":"S", "UCC":"s", "UCA":"S", "UCG":"S", | |
"UAU":"Y", "UAC":"Y", "UAA":"STOP", "UAG":"STOP", | |
"UGU":"C", "UGC":"C", "UGA":"STOP", "UGG":"W", | |
"CUU":"L", "CUC":"L", "CUA":"L", "CUG":"L", | |
"CCU":"P", "CCC":"P", "CCA":"P", "CCG":"P", | |
"CAU":"H", "CAC":"H", "CAA":"Q", "CAG":"Q", | |
"CGU":"R", "CGC":"R", "CGA":"R", "CGG":"R", | |
"AUU":"I", "AUC":"I", "AUA":"I", "AUG":"M", | |
"ACU":"T", "ACC":"T", "ACA":"T", "ACG":"T", | |
"AAU":"N", "AAC":"N", "AAA":"K", "AAG":"K", | |
"AGU":"S", "AGC":"S", "AGA":"R", "AGG":"R", | |
"GUU":"V", "GUC":"V", "GUA":"V", "GUG":"V", | |
"GCU":"A", "GCC":"A", "GCA":"A", "GCG":"A", | |
"GAU":"D", "GAC":"D", "GAA":"E", "GAG":"E", | |
"GGU":"G", "GGC":"G", "GGA":"G", "GGG":"G",} | |
i = 0 | |
prot = "" | |
while i<len(sequence)-3: | |
prot+=aa[sequence[i:i+3]] | |
i+=3 | |
print prot |
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