Created
January 25, 2022 09:07
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A workflowatized version of the standup query from NCATSTranslator/testing#169
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{ | |
"workflow": [ | |
{ | |
"id": "lookup" | |
}, | |
{ | |
"id": "overlay_compute_ngd", | |
"parameters": { | |
"virtual_relation_label": "NGD1", | |
"qnode_keys": ["n0", "n1"] | |
} | |
}, | |
{ | |
"id": "overlay_fisher_exact_test", | |
"parameters": { | |
"virtual_relation_label": "FET1", | |
"subject_qnode_key": "n0", | |
"object_qnode_key": "n1" | |
} | |
}, | |
{ | |
"id": "score" | |
}, | |
{ | |
"id": "sort_results_score", | |
"parameters": { | |
"ascending_or_descending": "descending" | |
} | |
} | |
], | |
"message": { | |
"query_graph": { | |
"edges": { | |
"e00": { | |
"subject": "n00", | |
"object": "n01", | |
"predicates": [ | |
"biolink:derives_from" | |
] | |
} | |
}, | |
"nodes": { | |
"n00": { | |
"categories": [ | |
"biolink:ChemicalEntity" | |
] | |
}, | |
"n01": { | |
"categories": [ | |
"biolink:ChemicalEntity" | |
], | |
"ids": [ | |
"PUBCHEM.COMPOUND:6140" | |
] | |
} | |
} | |
} | |
} | |
} |
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