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Last active January 23, 2017 19:00
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bug in RCy3 when combining Rule and Direct commands
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gistfile1.txt
deleteAllWindows(CytoscapeConnection())
cw <- CytoscapeWindow ('setNodeColorDirect.test', graph=makeSimpleGraph(), overwriteWindow=T)
displayGraph (cw)
layoutNetwork (cw, 'force-directed')
setNodeColorDirect (cw, 'A', '#880000')
setNodeColorDirect (cw, c('A', 'C'), c('#88FF00', '#880000'))
setNodeBorderColorDirect(cw, getAllNodes(cw), "#000000")
setNodeBorderColorRule(cw, "type",control.points=as.character(nodeData(cw@graph,attr="type")), colors=c('#FF0000', '#00FF00', '#0000FF'), mode="lookup")
setNodeColorDirect (cw, getAllNodes(cw), '#FFFFFF')
redraw(cw)
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