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flashton2003/parse_treebreaker.py

Created August 17, 2019 01:03
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parse_treebreaker.py
import dendropy as dpy
tree = dpy.Tree.get_from_path('/path/to/tree.nxs', 'nexus')
for nd in tree.postorder_node_iter():
if nd.is_internal():
nd_annot = nd.annotations.values_as_dict()
print nd_annot
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