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Philipp A. flying-sheep

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@flying-sheep
flying-sheep / PKGBUILD
Last active Apr 9, 2019
Newest primer3 version 2.4.0
View PKGBUILD
# Maintainer: Michael Schubert <mschu.dev at gmail>
# Contributor: Abhishek Dasgupta <abhidg@gmail.com>
pkgname=primer3
pkgver=2.4.0
pkgrel=1
pkgdesc="Tool to design flanking oligo nucleotides for DNA amplification"
arch=('i686' 'x86_64')
license=('GPL2')
depends=('gcc-libs')
url="http://primer3.sourceforge.net"
View PKGBUILD
# Maintainer: Franklyn Tackitt <franklyn@tackitt.net>
pkgname=v8-3.14-bin
_ver=3.14.5
pkgver=$_ver.8
pkgrel=1
pkgdesc="v8 3.14 binary package from ubuntu xenial"
url="https://github.com/v8/v8"
arch=('i686' 'x86_64')
license=('BSD new')
View un-nb-convertible.html
<!DOCTYPE html>
<html>
<head><meta charset="utf-8" />
<title>un-nb-convertible</title>
<script src="https://cdnjs.cloudflare.com/ajax/libs/require.js/2.1.10/require.min.js"></script>
<script src="https://cdnjs.cloudflare.com/ajax/libs/jquery/2.0.3/jquery.min.js"></script>
View rpy2 anndata.ipynb
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@flying-sheep
flying-sheep / example.md
Last active Feb 3, 2019
Just add some css for `.interactive-block > table`
View example.md

Example

first(code, 'block')

And

View R demo.ipynb
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View breeze-tabs.css
.close-icon {
list-style-image: url(data:image/svg+xml;base64,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
@flying-sheep
flying-sheep / BSdownload.md
Created Dec 13, 2018 — forked from lh3/BSdownload.md
Download files from Illumina's BaseSpace
View BSdownload.md

References:

Steps:

  1. Follow steps 1-5 in the first link above to acquire access_token. This will take a while, but you only need to do this once. Never share this token!!
  2. Find the file you want to download. Copy the link, which looks something like: https://basespace.illumina.com/sample/9804795/files/tree/NA12878-L1_S1_L001_R1_001.fastq.gz?id=515013503. The "id" is the unique file identifier.
  3. Download the file with: wget -O filename 'https://api.basespace.illumina.com/v1pre3/files/{id}/content?access_token={token}', where {token} is from step 1 and {id} from step 2.
View colormap test.ipynb
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View kBET R.ipynb
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