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h5py issue 480 testing
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| 16776885 | |
| Traceback (most recent call last): | |
| File "histest.py", line 9, in <module> | |
| dsid.get_type() | |
| File "_objects.pyx", line 54, in h5py._objects.with_phil.wrapper (/home/garrison/h5py_bug/newtest/testenv2-site/src/h5py/h5py/_objects.c:2508) | |
| File "_objects.pyx", line 55, in h5py._objects.with_phil.wrapper (/home/garrison/h5py_bug/newtest/testenv2-site/src/h5py/h5py/_objects.c:2461) | |
| File "h5d.pyx", line 307, in h5py.h5d.DatasetID.get_type (/home/garrison/h5py_bug/newtest/testenv2-site/src/h5py/h5py/h5d.c:4144) | |
| RuntimeError: Unable to register datatype (Can't insert duplicate key) |
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| import h5py | |
| i = 0 | |
| try: | |
| with h5py.File("test.h5", "w") as f: | |
| sid = h5py.h5s.create(h5py.h5s.SCALAR) | |
| dsid = h5py.h5d.create(f.id, b"test", h5py.h5t.IEEE_F32LE, sid) | |
| while True: | |
| dsid.get_type() | |
| i += 1 | |
| finally: | |
| print(i) |
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| 52101 | |
| Traceback (most recent call last): | |
| File "mytest.py", line 13, in <module> | |
| f["test"][...] | |
| File "_objects.pyx", line 54, in h5py._objects.with_phil.wrapper (/home/garrison/h5py_bug/newtest/testenv2-site/src/h5py/h5py/_objects.c:2508) | |
| File "_objects.pyx", line 55, in h5py._objects.with_phil.wrapper (/home/garrison/h5py_bug/newtest/testenv2-site/src/h5py/h5py/_objects.c:2461) | |
| File "/home/garrison/h5py_bug/newtest/testenv2-site/src/h5py/h5py/_hl/dataset.py", line 467, in __getitem__ | |
| self.id.read(mspace, fspace, arr, mtype) | |
| File "_objects.pyx", line 54, in h5py._objects.with_phil.wrapper (/home/garrison/h5py_bug/newtest/testenv2-site/src/h5py/h5py/_objects.c:2508) | |
| File "_objects.pyx", line 55, in h5py._objects.with_phil.wrapper (/home/garrison/h5py_bug/newtest/testenv2-site/src/h5py/h5py/_objects.c:2461) | |
| File "h5d.pyx", line 175, in h5py.h5d.DatasetID.read (/home/garrison/h5py_bug/newtest/testenv2-site/src/h5py/h5py/h5d.c:2995) | |
| File "_proxy.pyx", line 130, in h5py._proxy.dset_rw (/home/garrison/h5py_bug/newtest/testenv2-site/src/h5py/h5py/_proxy.c:1722) | |
| File "_proxy.pyx", line 84, in h5py._proxy.H5PY_H5Dread (/home/garrison/h5py_bug/newtest/testenv2-site/src/h5py/h5py/_proxy.c:1392) | |
| IOError: Can't read data (Inflate() failed) |
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| import shutil | |
| import tempfile | |
| import h5py | |
| tmpdir = tempfile.mkdtemp() | |
| i = 0 | |
| try: | |
| with h5py.File("test.h5", "w") as f: | |
| f.create_dataset("test", data=[[1,2],[3,4]], compression="gzip", shuffle=True) | |
| with h5py.File("test.h5", "r") as f: | |
| while True: | |
| f["test"][...] | |
| i += 1 | |
| finally: | |
| shutil.rmtree(tmpdir) | |
| print(i) | |
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| 51129 | |
| Traceback (most recent call last): | |
| File "mytest1.py", line 13, in <module> | |
| f["test"][...] | |
| File "_objects.pyx", line 54, in h5py._objects.with_phil.wrapper (/home/garrison/h5py_bug/newtest/testenv2-site/src/h5py/h5py/_objects.c:2508) | |
| File "_objects.pyx", line 55, in h5py._objects.with_phil.wrapper (/home/garrison/h5py_bug/newtest/testenv2-site/src/h5py/h5py/_objects.c:2461) | |
| File "/home/garrison/h5py_bug/newtest/testenv2-site/src/h5py/h5py/_hl/dataset.py", line 467, in __getitem__ | |
| self.id.read(mspace, fspace, arr, mtype) | |
| File "_objects.pyx", line 54, in h5py._objects.with_phil.wrapper (/home/garrison/h5py_bug/newtest/testenv2-site/src/h5py/h5py/_objects.c:2508) | |
| File "_objects.pyx", line 55, in h5py._objects.with_phil.wrapper (/home/garrison/h5py_bug/newtest/testenv2-site/src/h5py/h5py/_objects.c:2461) | |
| File "h5d.pyx", line 175, in h5py.h5d.DatasetID.read (/home/garrison/h5py_bug/newtest/testenv2-site/src/h5py/h5py/h5d.c:2995) | |
| File "_proxy.pyx", line 130, in h5py._proxy.dset_rw (/home/garrison/h5py_bug/newtest/testenv2-site/src/h5py/h5py/_proxy.c:1722) | |
| File "_proxy.pyx", line 84, in h5py._proxy.H5PY_H5Dread (/home/garrison/h5py_bug/newtest/testenv2-site/src/h5py/h5py/_proxy.c:1392) | |
| IOError: Can't read data (Inflate() failed) |
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| import shutil | |
| import tempfile | |
| import h5py | |
| tmpdir = tempfile.mkdtemp() | |
| i = 0 | |
| try: | |
| with h5py.File("test.h5", "w") as f: | |
| f.create_dataset("test", data=[[1,2],[3,4]], compression="gzip") | |
| with h5py.File("test.h5", "r") as f: | |
| while True: | |
| f["test"][...] | |
| i += 1 | |
| finally: | |
| shutil.rmtree(tmpdir) | |
| print(i) | |
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| 4194220 | |
| Traceback (most recent call last): | |
| File "mytest1a.py", line 13, in <module> | |
| f["test"][...] | |
| File "_objects.pyx", line 54, in h5py._objects.with_phil.wrapper (/home/garrison/h5py_bug/newtest/testenv2-site/src/h5py/h5py/_objects.c:2508) | |
| File "_objects.pyx", line 55, in h5py._objects.with_phil.wrapper (/home/garrison/h5py_bug/newtest/testenv2-site/src/h5py/h5py/_objects.c:2461) | |
| File "/home/garrison/h5py_bug/newtest/testenv2-site/src/h5py/h5py/_hl/dataset.py", line 400, in __getitem__ | |
| new_dtype = readtime_dtype(self.id.dtype, names) | |
| File "h5d.pyx", line 114, in h5py.h5d.DatasetID.dtype.__get__ (/home/garrison/h5py_bug/newtest/testenv2-site/src/h5py/h5py/h5d.c:2195) | |
| File "h5d.pyx", line 116, in h5py.h5d.DatasetID.dtype.__get__ (/home/garrison/h5py_bug/newtest/testenv2-site/src/h5py/h5py/h5d.c:2119) | |
| File "_objects.pyx", line 54, in h5py._objects.with_phil.wrapper (/home/garrison/h5py_bug/newtest/testenv2-site/src/h5py/h5py/_objects.c:2508) | |
| File "_objects.pyx", line 55, in h5py._objects.with_phil.wrapper (/home/garrison/h5py_bug/newtest/testenv2-site/src/h5py/h5py/_objects.c:2461) | |
| File "h5d.pyx", line 307, in h5py.h5d.DatasetID.get_type (/home/garrison/h5py_bug/newtest/testenv2-site/src/h5py/h5py/h5d.c:4144) | |
| RuntimeError: Unable to register datatype (Can't insert duplicate key) |
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| import shutil | |
| import tempfile | |
| import h5py | |
| tmpdir = tempfile.mkdtemp() | |
| i = 0 | |
| try: | |
| with h5py.File("test.h5", "w") as f: | |
| f.create_dataset("test", data=[[1,2],[3,4]]) | |
| with h5py.File("test.h5", "r") as f: | |
| while True: | |
| f["test"][...] | |
| i += 1 | |
| finally: | |
| shutil.rmtree(tmpdir) | |
| print(i) | |
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| 58013 | |
| Traceback (most recent call last): | |
| File "mytest2.py", line 12, in <module> | |
| f["test"][...] | |
| File "_objects.pyx", line 54, in h5py._objects.with_phil.wrapper (/home/garrison/h5py_bug/newtest/testenv2-site/src/h5py/h5py/_objects.c:2508) | |
| File "_objects.pyx", line 55, in h5py._objects.with_phil.wrapper (/home/garrison/h5py_bug/newtest/testenv2-site/src/h5py/h5py/_objects.c:2461) | |
| File "/home/garrison/h5py_bug/newtest/testenv2-site/src/h5py/h5py/_hl/dataset.py", line 467, in __getitem__ | |
| self.id.read(mspace, fspace, arr, mtype) | |
| File "_objects.pyx", line 54, in h5py._objects.with_phil.wrapper (/home/garrison/h5py_bug/newtest/testenv2-site/src/h5py/h5py/_objects.c:2508) | |
| File "_objects.pyx", line 55, in h5py._objects.with_phil.wrapper (/home/garrison/h5py_bug/newtest/testenv2-site/src/h5py/h5py/_objects.c:2461) | |
| File "h5d.pyx", line 175, in h5py.h5d.DatasetID.read (/home/garrison/h5py_bug/newtest/testenv2-site/src/h5py/h5py/h5d.c:2995) | |
| File "_proxy.pyx", line 130, in h5py._proxy.dset_rw (/home/garrison/h5py_bug/newtest/testenv2-site/src/h5py/h5py/_proxy.c:1722) | |
| File "_proxy.pyx", line 84, in h5py._proxy.H5PY_H5Dread (/home/garrison/h5py_bug/newtest/testenv2-site/src/h5py/h5py/_proxy.c:1392) | |
| IOError: Can't read data (Inflate() failed) |
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| import shutil | |
| import tempfile | |
| import h5py | |
| tmpdir = tempfile.mkdtemp() | |
| i = 0 | |
| try: | |
| with h5py.File("test.h5", "w") as f: | |
| f.create_dataset("test", data=[[1,2],[3,4]], compression="gzip") | |
| while True: | |
| f["test"][...] | |
| i += 1 | |
| finally: | |
| shutil.rmtree(tmpdir) | |
| print(i) | |
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| 4194220 | |
| Traceback (most recent call last): | |
| File "mytest2a.py", line 12, in <module> | |
| f["test"][...] | |
| File "_objects.pyx", line 54, in h5py._objects.with_phil.wrapper (/home/garrison/h5py_bug/newtest/testenv2-site/src/h5py/h5py/_objects.c:2508) | |
| File "_objects.pyx", line 55, in h5py._objects.with_phil.wrapper (/home/garrison/h5py_bug/newtest/testenv2-site/src/h5py/h5py/_objects.c:2461) | |
| File "/home/garrison/h5py_bug/newtest/testenv2-site/src/h5py/h5py/_hl/dataset.py", line 400, in __getitem__ | |
| new_dtype = readtime_dtype(self.id.dtype, names) | |
| File "h5d.pyx", line 114, in h5py.h5d.DatasetID.dtype.__get__ (/home/garrison/h5py_bug/newtest/testenv2-site/src/h5py/h5py/h5d.c:2195) | |
| File "h5d.pyx", line 116, in h5py.h5d.DatasetID.dtype.__get__ (/home/garrison/h5py_bug/newtest/testenv2-site/src/h5py/h5py/h5d.c:2119) | |
| File "_objects.pyx", line 54, in h5py._objects.with_phil.wrapper (/home/garrison/h5py_bug/newtest/testenv2-site/src/h5py/h5py/_objects.c:2508) | |
| File "_objects.pyx", line 55, in h5py._objects.with_phil.wrapper (/home/garrison/h5py_bug/newtest/testenv2-site/src/h5py/h5py/_objects.c:2461) | |
| File "h5d.pyx", line 307, in h5py.h5d.DatasetID.get_type (/home/garrison/h5py_bug/newtest/testenv2-site/src/h5py/h5py/h5d.c:4144) | |
| RuntimeError: Unable to register datatype (Can't insert duplicate key) |
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| import shutil | |
| import tempfile | |
| import h5py | |
| tmpdir = tempfile.mkdtemp() | |
| i = 0 | |
| try: | |
| with h5py.File("test.h5", "w") as f: | |
| f.create_dataset("test", data=[[1,2],[3,4]]) | |
| while True: | |
| f["test"][...] | |
| i += 1 | |
| finally: | |
| shutil.rmtree(tmpdir) | |
| print(i) | |
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| 8388440 | |
| Traceback (most recent call last): | |
| File "mytest3.py", line 12, in <module> | |
| f["test"].dtype | |
| File "_objects.pyx", line 54, in h5py._objects.with_phil.wrapper (/home/garrison/h5py_bug/newtest/testenv2-site/src/h5py/h5py/_objects.c:2508) | |
| File "_objects.pyx", line 55, in h5py._objects.with_phil.wrapper (/home/garrison/h5py_bug/newtest/testenv2-site/src/h5py/h5py/_objects.c:2461) | |
| File "/home/garrison/h5py_bug/newtest/testenv2-site/src/h5py/h5py/_hl/dataset.py", line 179, in dtype | |
| return self.id.dtype | |
| File "h5d.pyx", line 114, in h5py.h5d.DatasetID.dtype.__get__ (/home/garrison/h5py_bug/newtest/testenv2-site/src/h5py/h5py/h5d.c:2195) | |
| File "h5d.pyx", line 116, in h5py.h5d.DatasetID.dtype.__get__ (/home/garrison/h5py_bug/newtest/testenv2-site/src/h5py/h5py/h5d.c:2119) | |
| File "_objects.pyx", line 54, in h5py._objects.with_phil.wrapper (/home/garrison/h5py_bug/newtest/testenv2-site/src/h5py/h5py/_objects.c:2508) | |
| File "_objects.pyx", line 55, in h5py._objects.with_phil.wrapper (/home/garrison/h5py_bug/newtest/testenv2-site/src/h5py/h5py/_objects.c:2461) | |
| File "h5d.pyx", line 307, in h5py.h5d.DatasetID.get_type (/home/garrison/h5py_bug/newtest/testenv2-site/src/h5py/h5py/h5d.c:4144) | |
| RuntimeError: Unable to register datatype (Can't insert duplicate key) |
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| import shutil | |
| import tempfile | |
| import h5py | |
| tmpdir = tempfile.mkdtemp() | |
| i = 0 | |
| try: | |
| with h5py.File("test.h5", "w") as f: | |
| f.create_dataset("test", data=[[1,2],[3,4]], compression="gzip") | |
| while True: | |
| f["test"].dtype | |
| i += 1 | |
| finally: | |
| shutil.rmtree(tmpdir) | |
| print(i) | |
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| 8388440 | |
| Traceback (most recent call last): | |
| File "mytest3a.py", line 12, in <module> | |
| f["test"].dtype | |
| File "_objects.pyx", line 54, in h5py._objects.with_phil.wrapper (/home/garrison/h5py_bug/newtest/testenv2-site/src/h5py/h5py/_objects.c:2508) | |
| File "_objects.pyx", line 55, in h5py._objects.with_phil.wrapper (/home/garrison/h5py_bug/newtest/testenv2-site/src/h5py/h5py/_objects.c:2461) | |
| File "/home/garrison/h5py_bug/newtest/testenv2-site/src/h5py/h5py/_hl/dataset.py", line 179, in dtype | |
| return self.id.dtype | |
| File "h5d.pyx", line 114, in h5py.h5d.DatasetID.dtype.__get__ (/home/garrison/h5py_bug/newtest/testenv2-site/src/h5py/h5py/h5d.c:2195) | |
| File "h5d.pyx", line 116, in h5py.h5d.DatasetID.dtype.__get__ (/home/garrison/h5py_bug/newtest/testenv2-site/src/h5py/h5py/h5d.c:2119) | |
| File "_objects.pyx", line 54, in h5py._objects.with_phil.wrapper (/home/garrison/h5py_bug/newtest/testenv2-site/src/h5py/h5py/_objects.c:2508) | |
| File "_objects.pyx", line 55, in h5py._objects.with_phil.wrapper (/home/garrison/h5py_bug/newtest/testenv2-site/src/h5py/h5py/_objects.c:2461) | |
| File "h5d.pyx", line 307, in h5py.h5d.DatasetID.get_type (/home/garrison/h5py_bug/newtest/testenv2-site/src/h5py/h5py/h5d.c:4144) | |
| RuntimeError: Unable to register datatype (Can't insert duplicate key) |
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
| import shutil | |
| import tempfile | |
| import h5py | |
| tmpdir = tempfile.mkdtemp() | |
| i = 0 | |
| try: | |
| with h5py.File("test.h5", "w") as f: | |
| f.create_dataset("test", data=[[1,2],[3,4]]) | |
| while True: | |
| f["test"].dtype | |
| i += 1 | |
| finally: | |
| shutil.rmtree(tmpdir) | |
| print(i) | |
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