ggirelli

$argon2id$v=19$m=64,t=512,p=2$lYfb/rF6c+HbRDbF+BZP4g$SzHfCKSNvUulhI80Nk86yw

ggirelli

#! /bin/env bash

sinceDate="2023-02-01"
untilDate=$(date +%Y-%m-%d)
headerPattern='(\w+)(\(\w+\))?!?\: (.*)'
prefixPattern='[a-z0-9]+ [0-9-]+ '
typeGroupPattern='(feat|fix|revert|ci|docs|refactor|style|perf|test|chore)'

if [ ${#@} -gt 0 ]; then sinceDate=$1; fi
if [ ${#@} -gt 1 ]; then untilDate=$2; fi

ggirelli

ggirelli

ggirelli

#!/usr/bin/env bash

# As hic files contain sparse matrices, the matrix size is usually smaller than the expected (especially at high resolutions)
# This needs straw to be installed, see here: https://github.com/aidenlab/straw

hic_file="SRR2184278-93.hic"
resolution=100000
chromosomes=($(seq 1 22) X Y)

if [ -f "$hic_file.chrom_size.tsv" ]; then

ggirelli

Hi-C processing workflow based on 4DN consortium pipeline

0. Dumping
1. Alignment
2. Parsing & sorting
3. Merging
4. Duplicates
5. Filtering
6. Cooler
7. Juicer

ggirelli

from gg.enums import Pronoun
from gg.types.education import EdLevel, Institute, Subject
from gg.types.geography import City, Country, Province
from gg.types.personal import Url
from gg.types.time import FromYear, ToYear
from gg.types.work import Employer, JobTitle

type Location = tuple[City, Province, Country]

ggirelli

Keybase proof

I hereby claim:

• I am ggirelli on github.
• I am gggirelli (https://keybase.io/gggirelli) on keybase.
• I have a public key ASAU6K-iIjJnP-FZZ6_Hzvv5teH4HL24B_r35ePiSGPiXwo

To claim this, I am signing this object:

ggirelli

'''
@author: Gabriele Girelli
@contact: gigi.ga90@gmail.com
'''

import re
from typing import Iterator, List, Optional, Pattern, Tuple


class MultiRange(object):