Created
March 18, 2014 08:30
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testing {spocc}
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| > library(spocc) | |
| > spp <- c("Myricaria germanica") | |
| > dat <- occ(query = spp, from = "gbif", gbifopts = list(georeferenced = TRUE)) | |
| > dat | |
| Summary of results - occurrences found for: | |
| gbif : 25 records across 1 species | |
| bison : 0 records across 1 species | |
| inat : 0 records across 1 species | |
| ebird : 0 records across 1 species | |
| ecoengine : 0 records across 1 species | |
| antweb : 0 records across 1 species | |
| > | |
| > library(dismo) | |
| Lade nötiges Paket: raster | |
| Lade nötiges Paket: sp | |
| Warnmeldung: | |
| Paket ‘dismo’ wurde unter R Version 3.0.2 erstellt | |
| > | |
| > # get GBIF data with function: | |
| > myrger <- gbif("Myricaria", "germanica", geo = T) | |
| Loading required package: XML | |
| Attaching package: ‘XML’ | |
| Das folgende Objekt ist maskiert from ‘package:tools’: | |
| toHTML | |
| Myricaria germanica : 1474 occurrences found | |
| 1-1000-1474 | |
| > | |
| > # check: | |
| > str(myrger) | |
| 'data.frame': 1474 obs. of 25 variables: | |
| $ species : chr "Myricaria germanica" "Myricaria germanica" "Myricaria germanica" "Myricaria germanica" ... | |
| $ continent : chr "EUROPA" "EUROPA" "EUROPA" "EUROPA" ... | |
| $ country : chr "Spain" "Spain" "Spain" "Spain" ... | |
| $ adm1 : chr "Castellon" "Castellon" "Castellon" "Castellon" ... | |
| $ adm2 : chr "El Alto Mijares" "El Alto Mijares" "El Alto Mijares" "El Alto Mijares" ... | |
| $ locality : chr "Ludiente" "Ludiente" "Villahermosa del Río" "Castillo de Villamalefa" ... | |
| $ lat : num 40.1 40.1 40.2 40.1 40.1 ... | |
| $ lon : num -0.36 -0.36 -0.473 -0.36 -0.36 ... | |
| $ coordUncertaintyM : chr "7071" "7071" "7071" "7071" ... | |
| $ alt : num NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN ... | |
| $ institution : chr "BDBCV-General" "BDBCV-General" "BDBCV-General" "BDBCV-General" ... | |
| $ collection : chr "1" "1" "1" "1" ... | |
| $ catalogNumber : chr "282754" "282755" "282750" "282753" ... | |
| $ basisOfRecord : chr "observation" "observation" "observation" "observation" ... | |
| $ collector : chr NA NA NA NA ... | |
| $ earliestDateCollected: chr NA NA NA NA ... | |
| $ latestDateCollected : chr NA NA NA NA ... | |
| $ gbifNotes : chr "Data from GBIF data index - original values." "Data from GBIF data index - original values." "Data from GBIF data index - original values." "Data from GBIF data index - original values." ... | |
| $ downloadDate : Date, format: "2014-03-18" "2014-03-18" ... | |
| $ maxElevationM : chr NA NA NA NA ... | |
| $ minElevationM : chr NA NA NA NA ... | |
| $ maxDepthM : chr NA NA NA NA ... | |
| $ minDepthM : chr NA NA NA NA ... | |
| $ ISO2 : chr "ES" "ES" "ES" "ES" ... | |
| $ cloc : chr "Ludiente, Castellon, El Alto Mijares, Spain, EUROPA" "Ludiente, Castellon, El Alto Mijares, Spain, EUROPA" "Villahermosa del Río, Castellon, El Alto Mijares, Spain, EUROPA" "Castillo de Villamalefa, Castellon, El Alto Mijares, Spain, EUROPA" ... |
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