Created
February 3, 2014 03:51
-
-
Save glesica/8778625 to your computer and use it in GitHub Desktop.
A simple KNN implementation in Julia that allows for a reasonable level of flexibility. Written to practice using Julia.
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
function knn_normalize{T}(D::Array{T, 2}, mx::Array{T, 1}, mn::Array{T, 1}) | |
return mapslices(x -> (x - mn) ./ (mx - mn), D, 2) | |
end | |
function knn_normalize{T}(D::Array{T, 1}, mx::Array{T, 1}, mn::Array{T, 1}) | |
return (D - mn) ./ (mx - mn) | |
end | |
function knn_maxmin{T}(D::Array{T, 2}) | |
mx = vec(mapslices(maximum, D, 1)) | |
mn = vec(mapslices(minimum, D, 1)) | |
return mx, mn | |
end | |
function knn_dists{T}(train::Array{T, 2}, obs::Array{T, 1}) | |
tmx, tmn = knn_maxmin(train) | |
normtrain = knn_normalize(train, tmx, tmn) | |
normobs = knn_normalize(obs, tmx, tmn) | |
return vec(sqrt(sum(broadcast((a, b) -> (a-b)^2, transpose(normobs), normtrain), 2))) | |
end | |
function knn_weights{T}(dists::Array{T, 1}) | |
return 1 ./ dists .^ 2 | |
end | |
function knn_tally{T, J}(votes::Array{T, 1}, classes::Array{J, 1}) | |
tallies = Dict{J, T}() | |
for (c, v) = zip(classes, votes) | |
if ! haskey(tallies, c) | |
tallies[c] = 0 | |
end | |
tallies[c] += v | |
end | |
winner = classes[1] | |
winner_votes = votes[1] | |
for (c, v) = zip(keys(tallies), values(tallies)) | |
if v > winner_votes | |
winner = c | |
winner_votes = v | |
end | |
end | |
return winner | |
end | |
function knn{T, J}(k::Int, train::Array{T, 2}, classes::Array{J, 1}, obs::Array{T, 1}) | |
dists = knn_dists(train, obs) | |
nearest = sortperm(dists)[1:k] | |
return knn_tally(ones(k), classes[nearest]) | |
end | |
function knn{T, J}(train::Array{T, 2}, classes::Array{J, 1}, obs::Array{T, 1}) | |
dists = knn_dists(train, obs) | |
weights = knn_weights(dists) | |
return knn_tally(weights, classes) | |
end |
Sign up for free
to join this conversation on GitHub.
Already have an account?
Sign in to comment