Created
January 2, 2018 13:32
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script for loading the pytorch model, and processing incoming image and get the output for the skin cancer detection.
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import torch | |
import torchvision | |
from torchvision import datasets, transforms, models | |
import torch.nn as nn | |
from torch.autograd import Variable | |
from PIL import Image | |
import numpy as np | |
# >>> torch.__version__ | |
# '0.2.0_4' | |
# >>> numpy.__version__ | |
# '1.11.3' | |
# >>> PIL.__version__ | |
# '4.0.0' | |
# have the pytorch model, in the same directory and images in the directory called 'validating', change them according to your convenience. | |
if __name__ == "__main__": | |
model = models.resnet50() | |
model.fc = nn.Linear(2048, 2) | |
model.load_state_dict(torch.load('./best_model.pth', map_location={'cuda:0': 'cpu'})) | |
# Load image | |
real = Image.open('./validating/ISIC_0012151.jpg') | |
preprocess = transforms.Compose([ | |
transforms.Scale(256), | |
transforms.CenterCrop(224), | |
transforms.ToTensor(), | |
transforms.Normalize([0.485, 0.456, 0.406], [0.229, 0.224, 0.225]) | |
]) | |
# Load input | |
input_image = preprocess(real).unsqueeze_(0) | |
# pass it through the model | |
prediction = model(Variable(input_image)) | |
# get the result out and reshape it | |
cpu_pred = prediction.cpu() | |
result = cpu_pred.data.numpy() | |
print(result) | |
if (np.argmax(result) == 1): # there are two cases 0 position for being melanoma and 1 position for keratosis | |
str_label = 'benign' | |
else: | |
str_label = 'malignant' | |
print(str_label) |
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