Built with blockbuilder.org
Created
May 1, 2018 16:29
-
-
Save greenmna/61ca311d6b9324928ba0bc5ae7587da0 to your computer and use it in GitHub Desktop.
Amino Acid calculator
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
license: mit |
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
<!DOCTYPE html> | |
<head> | |
<meta charset="utf-8"> | |
<script src="https://d3js.org/d3.v4.min.js"></script> | |
<style> | |
body { margin:0;position:fixed;top:0;right:0;bottom:0;left:0; } | |
</style> | |
</head> | |
<body> | |
<script> | |
// Feel free to change or delete any of the code you see in this editor! | |
//serine (S), threonine (T), cysteine (C), asparagine (N), glutamine (Q), and tyrosine (W) | |
var aminoAcids = "MPRVVYGLSHSENGWPMVNADECEWTKIPGTSVTLQIAKGQPLAILRAFAADFHAYVEPLRDADSACWTPTNSVPSSNHLSGTAMDLNWNSHPFKVSYAGFDETKITTMRELLAFYEGTVFWGQDWNSPKDPMHAQCGYNTYGNPKTADFIARKIRADGYSTFRRGSAPASAAPILAAATGLSEARAAEILPAVRSGLRESECTNVNRIAMWLAQIGHESGSFQYTEEIAKNGRYAPYIGRTWIQITWDYNYRSFSQWAYAFGMVPTPDYFVVNYRELADLKWAGIGPAWYWTVARPDINELSDRRDLNTVTRRINGGTNGLADRQARYNRALAQGDALLQLLHEEDDFLSALTDAEQRELLDLARQQAKYKRKSRSPLHWPHEGEVDTIAGLSWSTDANVHIQLVEKLAVIYGDPVSIALLYAVSNSDDPTNNPELAKRILKRVKPEDITAAQVQIQKWLAAEQKFHAA" | |
polarAminoAcids = [] | |
totalAminoAcids = [] | |
//console.log(aminoAcids) | |
for (d in aminoAcids){ | |
if (d !== 'S'){totalAminoAcids.push[d]} | |
if (d !== 'T'){totalAminoAcids.push[d]} | |
if (d !== 'C'){totalAminoAcids.push[d]} | |
if (d !== 'N'){totalAminoAcids.push[d]} | |
if (d !== 'Q'){totalAminoAcids.push[d]} | |
if (d !== 'W'){totalAminoAcids.push[d]} | |
} | |
for (i in aminoAcids) { | |
if (i == 'S'){polarAminoAcids.push[i]} | |
else if (i == 'T'){polarAminoAcids.push[i]} | |
else if (i == 'C'){polarAminoAcids.push[i]} | |
else if (i == 'N'){polarAminoAcids.push[i]} | |
else if (i == 'Q'){polarAminoAcids.push[i]} | |
else if (i == 'W'){polarAminoAcids.push[i]} | |
} | |
calculatePolarPercent = (d3.sum(polarAminoAcids)/d3.sum(totalAminoAcids))*100 | |
</script> | |
</body> |
Sign up for free
to join this conversation on GitHub.
Already have an account?
Sign in to comment