Skip to content

Instantly share code, notes, and snippets.

@gregcaporaso
Last active September 30, 2015 20:25
Show Gist options
  • Star 0 You must be signed in to star a gist
  • Fork 0 You must be signed in to fork a gist
  • Save gregcaporaso/21a01f4a63bf77abe415 to your computer and use it in GitHub Desktop.
Save gregcaporaso/21a01f4a63bf77abe415 to your computer and use it in GitHub Desktop.
This parameters file can be passed to QIIME 1.9.1's pick_open_reference_otus.py command via the ``-p`` parameter to perform OTU picking at 100% identity. This is a computationally inefficient way to do this, so it may not work with very big data sets. We're working on integrating better approaches.
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment