Skip to content

Instantly share code, notes, and snippets.

@gregcaporaso

gregcaporaso/uc_fast_params.txt

Created July 8, 2013 21:49
Show Gist options
  • Star 0 You must be signed in to star a gist
  • Fork 0 You must be signed in to fork a gist
  • Save gregcaporaso/5952785 to your computer and use it in GitHub Desktop.
Save gregcaporaso/5952785 to your computer and use it in GitHub Desktop.
Download ZIP
uclust-fast parameter settings (this is a valid QIIME parameters file, and is used in the [Illumina overview tutorial](http://qiime.org/tutorials/illumina_overview_tutorial.html)).
Raw
uc_fast_params.txt
pick_otus:enable_rev_strand_match True
pick_otus:max_accepts 1
pick_otus:max_rejects 8
pick_otus:stepwords 8
pick_otus:word_length 8
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment