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Created February 14, 2013 18:13
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log file generated by `./configure --disable-tecplot --enable-tecio --with-netcdf=old --with-exodus=old --with-nemesis=old`
This file contains any messages produced by compilers while
running configure, to aid debugging if configure makes a mistake.
It was created by libmesh configure 0.9.1pre, which was
generated by GNU Autoconf 2.69. Invocation command line was
$ ./configure --disable-tecplot --enable-tecio --with-netcdf=old --with-exodus=old --with-nemesis=old
## --------- ##
## Platform. ##
## --------- ##
hostname = some.host.name
uname -m = x86_64
uname -r = 10.8.0
uname -s = Darwin
uname -v = Darwin Kernel Version 10.8.0: Tue Jun 7 16:32:41 PDT 2011; root:xnu-1504.15.3~1/RELEASE_X86_64
/usr/bin/uname -p = i386
/bin/uname -X = unknown
/bin/arch = unknown
/usr/bin/arch -k = unknown
/usr/convex/getsysinfo = unknown
/usr/bin/hostinfo = Mach kernel version:
Darwin Kernel Version 10.8.0: Tue Jun 7 16:32:41 PDT 2011; root:xnu-1504.15.3~1/RELEASE_X86_64
Kernel configured for up to 8 processors.
4 processors are physically available.
8 processors are logically available.
Processor type: i486 (Intel 80486)
Processors active: 0 1 2 3 4 5 6 7
Primary memory available: 16.00 gigabytes
Default processor set: 111 tasks, 532 threads, 8 processors
Load average: 1.21, Mach factor: 6.78
/bin/machine = unknown
/usr/bin/oslevel = unknown
/bin/universe = unknown
PATH: /Users/guyer/.virtualenvs/virtualbrew/bin
PATH: /Users/guyer/.homebrew/share/python
PATH: /Users/guyer/.homebrew/bin
PATH: /Users/guyer/bin
PATH: /usr/local/bin
PATH: /usr/bin
PATH: /bin
PATH: /usr/sbin
PATH: /sbin
PATH: /usr/local/bin
PATH: /usr/local/git/bin
PATH: /usr/texbin
PATH: /usr/X11/bin
## ----------- ##
## Core tests. ##
## ----------- ##
configure:3437: result: ---------------------------------------------
configure:3439: result: ----------- Configuring libMesh -------------
configure:3441: result: ---------------------------------------------
configure:3485: checking build system type
configure:3499: result: x86_64-apple-darwin10.8.0
configure:3519: checking host system type
configure:3532: result: x86_64-apple-darwin10.8.0
configure:3552: checking target system type
configure:3565: result: x86_64-apple-darwin10.8.0
configure:3638: checking for a BSD-compatible install
configure:3706: result: /usr/bin/install -c
configure:3717: checking whether build environment is sane
configure:3772: result: yes
configure:3923: checking for a thread-safe mkdir -p
configure:3962: result: build-aux/install-sh -c -d
configure:3969: checking for gawk
configure:3999: result: no
configure:3969: checking for mawk
configure:3999: result: no
configure:3969: checking for nawk
configure:3999: result: no
configure:3969: checking for awk
configure:3985: found /usr/bin/awk
configure:3996: result: awk
configure:4007: checking whether make sets $(MAKE)
configure:4029: result: yes
configure:4110: checking how to create a ustar tar archive
configure:4123: tar --version
bsdtar 2.6.2 - libarchive 2.6.2
configure:4126: $? = 0
configure:4166: tardir=conftest.dir && eval tar --format=ustar -chf - "$tardir" >conftest.tar
configure:4169: $? = 0
configure:4173: tar -xf - <conftest.tar
configure:4176: $? = 0
configure:4189: result: gnutar
configure:4209: checking whether make supports nested variables
configure:4226: result: yes
configure:4242: checking whether to enable maintainer-specific portions of Makefiles
configure:4251: result: yes
configure:4271: checking for src/base/libmesh.C
configure:4284: result: yes
configure:4331: checking for style of include used by make
configure:4359: result: GNU
configure:4479: checking for mpicxx
configure:4495: found /usr/bin/mpicxx
configure:4506: result: mpicxx
configure:4533: checking for C++ compiler version
configure:4542: mpicxx --version >&5
i686-apple-darwin10-g++-4.2.1 (GCC) 4.2.1 (Apple Inc. build 5666) (dot 3)
Copyright (C) 2007 Free Software Foundation, Inc.
This is free software; see the source for copying conditions. There is NO
warranty; not even for MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.
configure:4553: $? = 0
configure:4542: mpicxx -v >&5
Using built-in specs.
Target: i686-apple-darwin10
Configured with: /var/tmp/gcc/gcc-5666.3~6/src/configure --disable-checking --enable-werror --prefix=/usr --mandir=/share/man --enable-languages=c,objc,c++,obj-c++ --program-transform-name=/^[cg][^.-]*$/s/$/-4.2/ --with-slibdir=/usr/lib --build=i686-apple-darwin10 --program-prefix=i686-apple-darwin10- --host=x86_64-apple-darwin10 --target=i686-apple-darwin10 --with-gxx-include-dir=/include/c++/4.2.1
Thread model: posix
gcc version 4.2.1 (Apple Inc. build 5666) (dot 3)
configure:4553: $? = 0
configure:4542: mpicxx -V >&5
g++-4.2: argument to `-V' is missing
configure:4553: $? = 1
configure:4542: mpicxx -qversion >&5
i686-apple-darwin10-g++-4.2.1: no input files
configure:4553: $? = 1
configure:4573: checking whether the C++ compiler works
configure:4595: mpicxx conftest.cpp >&5
configure:4599: $? = 0
configure:4647: result: yes
configure:4650: checking for C++ compiler default output file name
configure:4652: result: a.out
configure:4658: checking for suffix of executables
configure:4665: mpicxx -o conftest conftest.cpp >&5
configure:4669: $? = 0
configure:4691: result:
configure:4713: checking whether we are cross compiling
configure:4721: mpicxx -o conftest conftest.cpp >&5
configure:4725: $? = 0
configure:4732: ./conftest
configure:4736: $? = 0
configure:4751: result: no
configure:4756: checking for suffix of object files
configure:4778: mpicxx -c conftest.cpp >&5
configure:4782: $? = 0
configure:4803: result: o
configure:4807: checking whether we are using the GNU C++ compiler
configure:4826: mpicxx -c conftest.cpp >&5
configure:4826: $? = 0
configure:4835: result: yes
configure:4844: checking whether mpicxx accepts -g
configure:4864: mpicxx -c -g conftest.cpp >&5
configure:4864: $? = 0
configure:4905: result: yes
configure:4930: checking dependency style of mpicxx
configure:5041: result: gcc3
configure:5114: result: <<< C++ compiler is gcc-4.2 >>>
configure:5199: result: <<< C++ compiler is built by Apple >>>
configure:5507: checking for mpicc
configure:5523: found /usr/bin/mpicc
configure:5534: result: mpicc
configure:5565: checking for C compiler version
configure:5574: mpicc --version >&5
i686-apple-darwin10-gcc-4.2.1 (GCC) 4.2.1 (Apple Inc. build 5666) (dot 3)
Copyright (C) 2007 Free Software Foundation, Inc.
This is free software; see the source for copying conditions. There is NO
warranty; not even for MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.
configure:5585: $? = 0
configure:5574: mpicc -v >&5
Using built-in specs.
Target: i686-apple-darwin10
Configured with: /var/tmp/gcc/gcc-5666.3~6/src/configure --disable-checking --enable-werror --prefix=/usr --mandir=/share/man --enable-languages=c,objc,c++,obj-c++ --program-transform-name=/^[cg][^.-]*$/s/$/-4.2/ --with-slibdir=/usr/lib --build=i686-apple-darwin10 --program-prefix=i686-apple-darwin10- --host=x86_64-apple-darwin10 --target=i686-apple-darwin10 --with-gxx-include-dir=/include/c++/4.2.1
Thread model: posix
gcc version 4.2.1 (Apple Inc. build 5666) (dot 3)
configure:5585: $? = 0
configure:5574: mpicc -V >&5
gcc-4.2: argument to `-V' is missing
configure:5585: $? = 1
configure:5574: mpicc -qversion >&5
i686-apple-darwin10-gcc-4.2.1: no input files
configure:5585: $? = 1
configure:5589: checking whether we are using the GNU C compiler
configure:5608: mpicc -c conftest.c >&5
configure:5608: $? = 0
configure:5617: result: yes
configure:5626: checking whether mpicc accepts -g
configure:5646: mpicc -c -g conftest.c >&5
configure:5646: $? = 0
configure:5687: result: yes
configure:5704: checking for mpicc option to accept ISO C89
configure:5767: mpicc -c conftest.c >&5
configure:5767: $? = 0
configure:5780: result: none needed
configure:5802: checking dependency style of mpicc
configure:5913: result: gcc3
configure:6026: checking for mpif90
configure:6042: found /usr/bin/mpif90
configure:6053: result: mpif90
configure:6079: checking for Fortran compiler version
configure:6088: mpif90 --version >&5
--------------------------------------------------------------------------
Unfortunately, this installation of Open MPI was not compiled with
Fortran 90 support. As such, the mpif90 compiler is non-functional.
--------------------------------------------------------------------------
configure:6099: $? = 1
configure:6088: mpif90 -v >&5
--------------------------------------------------------------------------
Unfortunately, this installation of Open MPI was not compiled with
Fortran 90 support. As such, the mpif90 compiler is non-functional.
--------------------------------------------------------------------------
configure:6099: $? = 1
configure:6088: mpif90 -V >&5
--------------------------------------------------------------------------
Unfortunately, this installation of Open MPI was not compiled with
Fortran 90 support. As such, the mpif90 compiler is non-functional.
--------------------------------------------------------------------------
configure:6099: $? = 1
configure:6088: mpif90 -qversion >&5
--------------------------------------------------------------------------
Unfortunately, this installation of Open MPI was not compiled with
Fortran 90 support. As such, the mpif90 compiler is non-functional.
--------------------------------------------------------------------------
configure:6099: $? = 1
configure:6108: checking whether we are using the GNU Fortran compiler
configure:6121: mpif90 -c conftest.F >&5
--------------------------------------------------------------------------
Unfortunately, this installation of Open MPI was not compiled with
Fortran 90 support. As such, the mpif90 compiler is non-functional.
--------------------------------------------------------------------------
configure:6121: $? = 1
configure: failed program was:
| program main
| #ifndef __GNUC__
| choke me
| #endif
|
| end
configure:6130: result: no
configure:6136: checking whether mpif90 accepts -g
configure:6147: mpif90 -c -g conftest.f >&5
--------------------------------------------------------------------------
Unfortunately, this installation of Open MPI was not compiled with
Fortran 90 support. As such, the mpif90 compiler is non-functional.
--------------------------------------------------------------------------
configure:6147: $? = 1
configure: failed program was:
| program main
|
| end
configure:6155: result: no
configure:6257: checking for mpif77
configure:6273: found /usr/bin/mpif77
configure:6284: result: mpif77
configure:6310: checking for Fortran 77 compiler version
configure:6319: mpif77 --version >&5
--------------------------------------------------------------------------
Unfortunately, this installation of Open MPI was not compiled with
Fortran 77 support. As such, the mpif77 compiler is non-functional.
--------------------------------------------------------------------------
configure:6330: $? = 1
configure:6319: mpif77 -v >&5
--------------------------------------------------------------------------
Unfortunately, this installation of Open MPI was not compiled with
Fortran 77 support. As such, the mpif77 compiler is non-functional.
--------------------------------------------------------------------------
configure:6330: $? = 1
configure:6319: mpif77 -V >&5
--------------------------------------------------------------------------
Unfortunately, this installation of Open MPI was not compiled with
Fortran 77 support. As such, the mpif77 compiler is non-functional.
--------------------------------------------------------------------------
configure:6330: $? = 1
configure:6319: mpif77 -qversion >&5
--------------------------------------------------------------------------
Unfortunately, this installation of Open MPI was not compiled with
Fortran 77 support. As such, the mpif77 compiler is non-functional.
--------------------------------------------------------------------------
configure:6330: $? = 1
configure:6339: checking whether we are using the GNU Fortran 77 compiler
configure:6352: mpif77 -c conftest.F >&5
--------------------------------------------------------------------------
Unfortunately, this installation of Open MPI was not compiled with
Fortran 77 support. As such, the mpif77 compiler is non-functional.
--------------------------------------------------------------------------
configure:6352: $? = 1
configure: failed program was:
| program main
| #ifndef __GNUC__
| choke me
| #endif
|
| end
configure:6361: result: no
configure:6367: checking whether mpif77 accepts -g
configure:6378: mpif77 -c -g conftest.f >&5
--------------------------------------------------------------------------
Unfortunately, this installation of Open MPI was not compiled with
Fortran 77 support. As such, the mpif77 compiler is non-functional.
--------------------------------------------------------------------------
configure:6378: $? = 1
configure: failed program was:
| program main
|
| end
configure:6386: result: no
configure:6471: result: << Disabling GLIBCXX debugging on Darwin >>>
configure:7177: result: No build methods specified, defaulting to "dbg devel opt"
configure:7184: result: <<< Configuring libMesh with methods "dbg devel opt" >>>
configure:7349: checking how to print strings
configure:7376: result: printf
configure:7397: checking for a sed that does not truncate output
configure:7461: result: /usr/bin/sed
configure:7479: checking for grep that handles long lines and -e
configure:7537: result: /usr/bin/grep
configure:7542: checking for egrep
configure:7604: result: /usr/bin/grep -E
configure:7609: checking for fgrep
configure:7671: result: /usr/bin/grep -F
configure:7706: checking for ld used by mpicc
configure:7773: result: /usr/libexec/gcc/i686-apple-darwin10/4.2.1/ld
configure:7780: checking if the linker (/usr/libexec/gcc/i686-apple-darwin10/4.2.1/ld) is GNU ld
configure:7795: result: no
configure:7807: checking for BSD- or MS-compatible name lister (nm)
configure:7856: result: /usr/bin/nm
configure:7986: checking the name lister (/usr/bin/nm) interface
configure:7993: mpicxx -c conftest.cpp >&5
configure:7996: /usr/bin/nm "conftest.o"
configure:7999: output
0000000000000000 D _some_variable
configure:8006: result: BSD nm
configure:8009: checking whether ln -s works
configure:8013: result: yes
configure:8021: checking the maximum length of command line arguments
configure:8151: result: 196608
configure:8168: checking whether the shell understands some XSI constructs
configure:8178: result: yes
configure:8182: checking whether the shell understands "+="
configure:8188: result: yes
configure:8223: checking how to convert x86_64-apple-darwin10.8.0 file names to x86_64-apple-darwin10.8.0 format
configure:8263: result: func_convert_file_noop
configure:8270: checking how to convert x86_64-apple-darwin10.8.0 file names to toolchain format
configure:8290: result: func_convert_file_noop
configure:8297: checking for /usr/libexec/gcc/i686-apple-darwin10/4.2.1/ld option to reload object files
configure:8304: result: -r
configure:8378: checking for objdump
configure:8408: result: no
configure:8437: checking how to recognize dependent libraries
configure:8639: result: pass_all
configure:8724: checking for dlltool
configure:8754: result: no
configure:8784: checking how to associate runtime and link libraries
configure:8811: result: printf %s\n
configure:8871: checking for ar
configure:8887: found /usr/bin/ar
configure:8898: result: ar
configure:8935: checking for archiver @FILE support
configure:8952: mpicxx -c conftest.cpp >&5
configure:8952: $? = 0
configure:8955: ar cru libconftest.a @conftest.lst >&5
ar: @conftest.lst: No such file or directory
configure:8958: $? = 1
configure:8978: result: no
configure:9036: checking for strip
configure:9052: found /usr/bin/strip
configure:9063: result: strip
configure:9135: checking for ranlib
configure:9151: found /usr/bin/ranlib
configure:9162: result: ranlib
configure:9264: checking command to parse /usr/bin/nm output from mpicc object
configure:9384: mpicxx -c conftest.cpp >&5
configure:9387: $? = 0
configure:9391: /usr/bin/nm conftest.o \| sed -n -e 's/^.*[ ]\([BCDEGRST][BCDEGRST]*\)[ ][ ]*\([_A-Za-z][_A-Za-z0-9]*\)$/\1 \2 \2/p' | sed '/ __gnu_lto/d' \> conftest.nm
configure:9394: $? = 0
cannot find nm_test_var in conftest.nm
configure:9384: mpicxx -c conftest.cpp >&5
configure:9387: $? = 0
configure:9391: /usr/bin/nm conftest.o \| sed -n -e 's/^.*[ ]\([BCDEGRST][BCDEGRST]*\)[ ][ ]*_\([_A-Za-z][_A-Za-z0-9]*\)$/\1 _\2 \2/p' | sed '/ __gnu_lto/d' \> conftest.nm
configure:9394: $? = 0
configure:9460: mpicxx -o conftest conftest.cpp conftstm.o >&5
configure:9463: $? = 0
configure:9501: result: ok
configure:9538: checking for sysroot
configure:9568: result: no
configure:9824: checking for mt
configure:9854: result: no
configure:9874: checking if : is a manifest tool
configure:9880: : '-?'
configure:9888: result: no
configure:9944: checking for dsymutil
configure:9960: found /usr/bin/dsymutil
configure:9971: result: dsymutil
configure:10036: checking for nmedit
configure:10052: found /usr/bin/nmedit
configure:10063: result: nmedit
configure:10128: checking for lipo
configure:10144: found /usr/bin/lipo
configure:10155: result: lipo
configure:10220: checking for otool
configure:10236: found /usr/bin/otool
configure:10247: result: otool
configure:10312: checking for otool64
configure:10342: result: no
configure:10387: checking for -single_module linker flag
mpicc -o libconftest.dylib -dynamiclib -Wl,-single_module conftest.c
configure:10420: result: yes
configure:10423: checking for -exported_symbols_list linker flag
configure:10443: mpicxx -o conftest -Wl,-exported_symbols_list,conftest.sym conftest.cpp >&5
configure:10443: $? = 0
configure:10453: result: yes
configure:10456: checking for -force_load linker flag
mpicc -c -o conftest.o conftest.c
ar cru libconftest.a conftest.o
ranlib libconftest.a
mpicc -o conftest conftest.c -Wl,-force_load,./libconftest.a
configure:10488: result: yes
configure:10530: checking how to run the C preprocessor
configure:10561: mpicc -E conftest.c
configure:10561: $? = 0
configure:10575: mpicc -E conftest.c
conftest.c:12:28: error: ac_nonexistent.h: No such file or directory
configure:10575: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "libmesh"
| #define PACKAGE_TARNAME "libmesh"
| #define PACKAGE_VERSION "0.9.1pre"
| #define PACKAGE_STRING "libmesh 0.9.1pre"
| #define PACKAGE_BUGREPORT "libmesh-users@lists.sourceforge.net"
| #define PACKAGE_URL "http://libmesh.sourceforge.net"
| #define CONFIGURE_INFO "./configure '--disable-tecplot' '--enable-tecio' '--with-netcdf=old' '--with-exodus=old' '--with-nemesis=old'"
| #define PACKAGE "libmesh"
| #define VERSION "0.9.1pre"
| /* end confdefs.h. */
| #include <ac_nonexistent.h>
configure:10600: result: mpicc -E
configure:10620: mpicc -E conftest.c
configure:10620: $? = 0
configure:10634: mpicc -E conftest.c
conftest.c:12:28: error: ac_nonexistent.h: No such file or directory
configure:10634: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "libmesh"
| #define PACKAGE_TARNAME "libmesh"
| #define PACKAGE_VERSION "0.9.1pre"
| #define PACKAGE_STRING "libmesh 0.9.1pre"
| #define PACKAGE_BUGREPORT "libmesh-users@lists.sourceforge.net"
| #define PACKAGE_URL "http://libmesh.sourceforge.net"
| #define CONFIGURE_INFO "./configure '--disable-tecplot' '--enable-tecio' '--with-netcdf=old' '--with-exodus=old' '--with-nemesis=old'"
| #define PACKAGE "libmesh"
| #define VERSION "0.9.1pre"
| /* end confdefs.h. */
| #include <ac_nonexistent.h>
configure:10663: checking for ANSI C header files
configure:10683: mpicc -c conftest.c >&5
configure:10683: $? = 0
configure:10756: mpicc -o conftest conftest.c >&5
configure:10756: $? = 0
configure:10756: ./conftest
configure:10756: $? = 0
configure:10767: result: yes
configure:10780: checking for sys/types.h
configure:10780: mpicc -c conftest.c >&5
configure:10780: $? = 0
configure:10780: result: yes
configure:10780: checking for sys/stat.h
configure:10780: mpicc -c conftest.c >&5
configure:10780: $? = 0
configure:10780: result: yes
configure:10780: checking for stdlib.h
configure:10780: mpicc -c conftest.c >&5
configure:10780: $? = 0
configure:10780: result: yes
configure:10780: checking for string.h
configure:10780: mpicc -c conftest.c >&5
configure:10780: $? = 0
configure:10780: result: yes
configure:10780: checking for memory.h
configure:10780: mpicc -c conftest.c >&5
configure:10780: $? = 0
configure:10780: result: yes
configure:10780: checking for strings.h
configure:10780: mpicc -c conftest.c >&5
configure:10780: $? = 0
configure:10780: result: yes
configure:10780: checking for inttypes.h
configure:10780: mpicc -c conftest.c >&5
configure:10780: $? = 0
configure:10780: result: yes
configure:10780: checking for stdint.h
configure:10780: mpicc -c conftest.c >&5
configure:10780: $? = 0
configure:10780: result: yes
configure:10780: checking for unistd.h
configure:10780: mpicc -c conftest.c >&5
configure:10780: $? = 0
configure:10780: result: yes
configure:10794: checking for dlfcn.h
configure:10794: mpicc -c conftest.c >&5
configure:10794: $? = 0
configure:10794: result: yes
configure:11010: checking for objdir
configure:11025: result: .libs
configure:11296: checking if mpicc supports -fno-rtti -fno-exceptions
configure:11314: mpicc -c -fno-rtti -fno-exceptions conftest.c >&5
cc1: warning: command line option "-fno-rtti" is valid for C++/ObjC++ but not for C
configure:11318: $? = 0
configure:11331: result: no
configure:11658: checking for mpicc option to produce PIC
configure:11665: result: -fno-common -DPIC
configure:11673: checking if mpicc PIC flag -fno-common -DPIC works
configure:11691: mpicc -c -fno-common -DPIC -DPIC conftest.c >&5
configure:11695: $? = 0
configure:11708: result: yes
configure:11737: checking if mpicc static flag -static works
configure:11765: result: no
configure:11780: checking if mpicc supports -c -o file.o
configure:11801: mpicc -c -o out/conftest2.o conftest.c >&5
configure:11805: $? = 0
configure:11827: result: yes
configure:11835: checking if mpicc supports -c -o file.o
configure:11882: result: yes
configure:11915: checking whether the mpicc linker (/usr/libexec/gcc/i686-apple-darwin10/4.2.1/ld) supports shared libraries
configure:13068: result: yes
configure:13308: checking dynamic linker characteristics
configure:14041: result: darwin10.8.0 dyld
configure:14148: checking how to hardcode library paths into programs
configure:14173: result: immediate
configure:14713: checking whether stripping libraries is possible
configure:14727: result: yes
configure:14753: checking if libtool supports shared libraries
configure:14755: result: yes
configure:14758: checking whether to build shared libraries
configure:14779: result: yes
configure:14782: checking whether to build static libraries
configure:14786: result: no
configure:14809: checking how to run the C++ preprocessor
configure:14836: mpicxx -E conftest.cpp
configure:14836: $? = 0
configure:14850: mpicxx -E conftest.cpp
conftest.cpp:24:28: error: ac_nonexistent.h: No such file or directory
configure:14850: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "libmesh"
| #define PACKAGE_TARNAME "libmesh"
| #define PACKAGE_VERSION "0.9.1pre"
| #define PACKAGE_STRING "libmesh 0.9.1pre"
| #define PACKAGE_BUGREPORT "libmesh-users@lists.sourceforge.net"
| #define PACKAGE_URL "http://libmesh.sourceforge.net"
| #define CONFIGURE_INFO "./configure '--disable-tecplot' '--enable-tecio' '--with-netcdf=old' '--with-exodus=old' '--with-nemesis=old'"
| #define PACKAGE "libmesh"
| #define VERSION "0.9.1pre"
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_DLFCN_H 1
| #define LT_OBJDIR ".libs/"
| /* end confdefs.h. */
| #include <ac_nonexistent.h>
configure:14875: result: mpicxx -E
configure:14895: mpicxx -E conftest.cpp
configure:14895: $? = 0
configure:14909: mpicxx -E conftest.cpp
conftest.cpp:24:28: error: ac_nonexistent.h: No such file or directory
configure:14909: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "libmesh"
| #define PACKAGE_TARNAME "libmesh"
| #define PACKAGE_VERSION "0.9.1pre"
| #define PACKAGE_STRING "libmesh 0.9.1pre"
| #define PACKAGE_BUGREPORT "libmesh-users@lists.sourceforge.net"
| #define PACKAGE_URL "http://libmesh.sourceforge.net"
| #define CONFIGURE_INFO "./configure '--disable-tecplot' '--enable-tecio' '--with-netcdf=old' '--with-exodus=old' '--with-nemesis=old'"
| #define PACKAGE "libmesh"
| #define VERSION "0.9.1pre"
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_DLFCN_H 1
| #define LT_OBJDIR ".libs/"
| /* end confdefs.h. */
| #include <ac_nonexistent.h>
configure:15078: checking for ld used by mpicxx
configure:15145: result: /usr/libexec/gcc/i686-apple-darwin10/4.2.1/ld
configure:15152: checking if the linker (/usr/libexec/gcc/i686-apple-darwin10/4.2.1/ld) is GNU ld
configure:15167: result: no
configure:15222: checking whether the mpicxx linker (/usr/libexec/gcc/i686-apple-darwin10/4.2.1/ld) supports shared libraries
configure:16227: result: yes
configure:16263: mpicxx -c conftest.cpp >&5
configure:16266: $? = 0
configure:16786: checking for mpicxx option to produce PIC
configure:16793: result: -fno-common -DPIC
configure:16801: checking if mpicxx PIC flag -fno-common -DPIC works
configure:16819: mpicxx -c -fno-common -DPIC -DPIC conftest.cpp >&5
configure:16823: $? = 0
configure:16836: result: yes
configure:16859: checking if mpicxx static flag -static works
configure:16887: result: no
configure:16899: checking if mpicxx supports -c -o file.o
configure:16920: mpicxx -c -o out/conftest2.o conftest.cpp >&5
configure:16924: $? = 0
configure:16946: result: yes
configure:16951: checking if mpicxx supports -c -o file.o
configure:16998: result: yes
configure:17028: checking whether the mpicxx linker (/usr/libexec/gcc/i686-apple-darwin10/4.2.1/ld) supports shared libraries
configure:17064: result: yes
configure:17205: checking dynamic linker characteristics
configure:17872: result: darwin10.8.0 dyld
configure:17925: checking how to hardcode library paths into programs
configure:17950: result: immediate
configure:18098: checking if libtool supports shared libraries
configure:18100: result: yes
configure:18103: checking whether to build shared libraries
configure:18123: result: yes
configure:18126: checking whether to build static libraries
configure:18130: result: no
configure:18451: checking for mpif77 option to produce PIC
configure:18458: result:
configure:18524: checking if mpif77 static flag works
configure:18552: result: no
configure:18564: checking if mpif77 supports -c -o file.o
configure:18585: mpif77 -c -o out/conftest2.o conftest.f >&5
--------------------------------------------------------------------------
Unfortunately, this installation of Open MPI was not compiled with
Fortran 77 support. As such, the mpif77 compiler is non-functional.
--------------------------------------------------------------------------
configure:18589: $? = 1
configure:18611: result: no
configure:18616: checking if mpif77 supports -c -o file.o
configure:18663: result: no
configure:18693: checking whether the mpif77 linker (/usr/libexec/gcc/i686-apple-darwin10/4.2.1/ld) supports shared libraries
configure:19796: result: no
configure:19937: checking dynamic linker characteristics
configure:20598: result: darwin10.8.0 dyld
configure:20651: checking how to hardcode library paths into programs
configure:20676: result: immediate
configure:20820: checking if libtool supports shared libraries
configure:20822: result: no
configure:20825: checking whether to build shared libraries
configure:20845: result: no
configure:20848: checking whether to build static libraries
configure:20852: result: yes
configure:20886: mpif90 -c conftest.f >&5
--------------------------------------------------------------------------
Unfortunately, this installation of Open MPI was not compiled with
Fortran 90 support. As such, the mpif90 compiler is non-functional.
--------------------------------------------------------------------------
configure:20889: $? = 1
configure:21318: checking for mpif90 option to produce PIC
configure:21325: result:
configure:21391: checking if mpif90 static flag works
configure:21419: result: no
configure:21431: checking if mpif90 supports -c -o file.o
configure:21452: mpif90 -c -o out/conftest2.o conftest.f >&5
--------------------------------------------------------------------------
Unfortunately, this installation of Open MPI was not compiled with
Fortran 90 support. As such, the mpif90 compiler is non-functional.
--------------------------------------------------------------------------
configure:21456: $? = 1
configure:21478: result: no
configure:21483: checking if mpif90 supports -c -o file.o
configure:21530: result: no
configure:21560: checking whether the mpif90 linker (/usr/libexec/gcc/i686-apple-darwin10/4.2.1/ld) supports shared libraries
configure:22663: result: no
configure:22804: checking dynamic linker characteristics
configure:23465: result: darwin10.8.0 dyld
configure:23518: checking how to hardcode library paths into programs
configure:23543: result: immediate
configure:23604: checking Major version
configure:23606: result: 0
configure:23608: checking Minor version
configure:23610: result: 9
configure:23612: checking Point version
configure:23614: result: 1
configure:23659: checking whether ln -s works
configure:23663: result: yes
configure:23683: checking for a sed that does not truncate output
configure:23747: result: /usr/bin/sed
configure:23761: checking for perl
configure:23779: found /usr/bin/perl
configure:23791: result: /usr/bin/perl
configure:23815: checking for pkg-config
configure:23833: found /Users/guyer/.homebrew/bin/pkg-config
configure:23846: result: /Users/guyer/.homebrew/bin/pkg-config
configure:23860: checking whether the compiler implements namespaces
configure:23883: mpicxx -c conftest.cpp >&5
configure:23883: $? = 0
configure:23897: result: yes
configure:23906: result: ---------------------------------------------
configure:23908: result: ------- Configuring compiler features -------
configure:23910: result: ---------------------------------------------
configure:23985: result: <<< Default floating point is double precision (double) >>>
configure:24023: checking for C/C++ restrict keyword
configure:24048: mpicxx -c conftest.cpp >&5
configure:24048: $? = 0
configure:24056: result: __restrict
configure:24093: result: <<< Configuring library with getpwuid >>>
configure:24115: result: <<< Configuring library with exception throwing support >>>
configure:24129: checking size of short int
configure:24134: mpicxx -o conftest conftest.cpp >&5
configure:24134: $? = 0
configure:24134: ./conftest
configure:24134: $? = 0
configure:24148: result: 2
configure:24162: checking size of int
configure:24167: mpicxx -o conftest conftest.cpp >&5
configure:24167: $? = 0
configure:24167: ./conftest
configure:24167: $? = 0
configure:24181: result: 4
configure:24195: checking size of unsigned int
configure:24200: mpicxx -o conftest conftest.cpp >&5
configure:24200: $? = 0
configure:24200: ./conftest
configure:24200: $? = 0
configure:24214: result: 4
configure:24228: checking size of long int
configure:24233: mpicxx -o conftest conftest.cpp >&5
configure:24233: $? = 0
configure:24233: ./conftest
configure:24233: $? = 0
configure:24247: result: 8
configure:24261: checking size of float
configure:24266: mpicxx -o conftest conftest.cpp >&5
configure:24266: $? = 0
configure:24266: ./conftest
configure:24266: $? = 0
configure:24280: result: 4
configure:24294: checking size of double
configure:24299: mpicxx -o conftest conftest.cpp >&5
configure:24299: $? = 0
configure:24299: ./conftest
configure:24299: $? = 0
configure:24313: result: 8
configure:24327: checking size of void *
configure:24332: mpicxx -o conftest conftest.cpp >&5
configure:24332: $? = 0
configure:24332: ./conftest
configure:24332: $? = 0
configure:24346: result: 8
configure:24365: checking size of function_pointer
configure:24370: mpicxx -o conftest conftest.cpp >&5
configure:24370: $? = 0
configure:24370: ./conftest
configure:24370: $? = 0
configure:24385: result: 8
configure:24400: checking whether the compiler supports Run-Time Type Identification
configure:24435: mpicxx -c conftest.cpp >&5
configure:24435: $? = 0
configure:24449: result: yes
configure:24465: checking getopt.h usability
configure:24465: mpicxx -c conftest.cpp >&5
configure:24465: $? = 0
configure:24465: result: yes
configure:24465: checking getopt.h presence
configure:24465: mpicxx -E conftest.cpp
configure:24465: $? = 0
configure:24465: result: yes
configure:24465: checking for getopt.h
configure:24465: result: yes
configure:24477: checking csignal usability
configure:24477: mpicxx -c conftest.cpp >&5
configure:24477: $? = 0
configure:24477: result: yes
configure:24477: checking csignal presence
configure:24477: mpicxx -E conftest.cpp
configure:24477: $? = 0
configure:24477: result: yes
configure:24477: checking for csignal
configure:24477: result: yes
configure:24489: checking sys/resource.h usability
configure:24489: mpicxx -c conftest.cpp >&5
configure:24489: $? = 0
configure:24489: result: yes
configure:24489: checking sys/resource.h presence
configure:24489: mpicxx -E conftest.cpp
configure:24489: $? = 0
configure:24489: result: yes
configure:24489: checking for sys/resource.h
configure:24489: result: yes
configure:24499: checking whether the compiler has locale
configure:24526: mpicxx -c conftest.cpp >&5
configure:24526: $? = 0
configure:24540: result: yes
configure:24548: checking whether the compiler has stringstream
configure:24575: mpicxx -c conftest.cpp >&5
configure:24575: $? = 0
configure:24589: result: yes
configure:24657: checking fenv.h usability
configure:24657: mpicxx -c conftest.cpp >&5
configure:24657: $? = 0
configure:24657: result: yes
configure:24657: checking fenv.h presence
configure:24657: mpicxx -E conftest.cpp
configure:24657: $? = 0
configure:24657: result: yes
configure:24657: checking for fenv.h
configure:24657: result: yes
configure:24669: checking xmmintrin.h usability
configure:24669: mpicxx -c conftest.cpp >&5
configure:24669: $? = 0
configure:24669: result: yes
configure:24669: checking xmmintrin.h presence
configure:24669: mpicxx -E conftest.cpp
configure:24669: $? = 0
configure:24669: result: yes
configure:24669: checking for xmmintrin.h
configure:24669: result: yes
configure:24698: mpicxx -c conftest.cpp >&5
conftest.cpp: In function 'int main()':
conftest.cpp:58: error: 'feenableexcept' was not declared in this scope
configure:24698: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "libmesh"
| #define PACKAGE_TARNAME "libmesh"
| #define PACKAGE_VERSION "0.9.1pre"
| #define PACKAGE_STRING "libmesh 0.9.1pre"
| #define PACKAGE_BUGREPORT "libmesh-users@lists.sourceforge.net"
| #define PACKAGE_URL "http://libmesh.sourceforge.net"
| #define CONFIGURE_INFO "./configure '--disable-tecplot' '--enable-tecio' '--with-netcdf=old' '--with-exodus=old' '--with-nemesis=old'"
| #define PACKAGE "libmesh"
| #define VERSION "0.9.1pre"
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_DLFCN_H 1
| #define LT_OBJDIR ".libs/"
| #define MAJOR_VERSION 0
| #define MINOR_VERSION 9
| #define MICRO_VERSION 1
| #define LIB_VERSION "0.9.1pre"
| #define LIB_RELEASE ""
| #define CXX "mpicxx"
| #define IO_COMPATIBILITY_VERSION "0.7.4"
| #define HAVE_NAMESPACES /**/
| #define DEFAULT_DOUBLE_PRECISION 1
| #define DEFAULT_SCALAR_TYPE double
| #define restrict __restrict
| #define HAVE_GETPWUID 1
| #define ENABLE_EXCEPTIONS 1
| #define SIZEOF_SHORT_INT 2
| #define SIZEOF_INT 4
| #define SIZEOF_UNSIGNED_INT 4
| #define SIZEOF_LONG_INT 8
| #define SIZEOF_FLOAT 4
| #define SIZEOF_DOUBLE 8
| #define SIZEOF_VOID_P 8
| #define SIZEOF_FUNCTION_POINTER 8
| #define HAVE_RTTI /**/
| #define HAVE_GETOPT_H 1
| #define HAVE_CSIGNAL 1
| #define HAVE_SYS_RESOURCE_H 1
| #define HAVE_LOCALE /**/
| #define HAVE_SSTREAM /**/
| #define HAVE_STRINGSTREAM /**/
| #define HAVE_FENV_H 1
| #define HAVE_XMMINTRIN_H 1
| /* end confdefs.h. */
| #include <fenv.h>
| int
| main ()
| {
| feenableexcept(FE_DIVBYZERO | FE_INVALID);
| ;
| return 0;
| }
configure:24722: mpicxx -c conftest.cpp >&5
conftest.cpp: In function 'int main()':
conftest.cpp:58: error: 'fedisableexcept' was not declared in this scope
configure:24722: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "libmesh"
| #define PACKAGE_TARNAME "libmesh"
| #define PACKAGE_VERSION "0.9.1pre"
| #define PACKAGE_STRING "libmesh 0.9.1pre"
| #define PACKAGE_BUGREPORT "libmesh-users@lists.sourceforge.net"
| #define PACKAGE_URL "http://libmesh.sourceforge.net"
| #define CONFIGURE_INFO "./configure '--disable-tecplot' '--enable-tecio' '--with-netcdf=old' '--with-exodus=old' '--with-nemesis=old'"
| #define PACKAGE "libmesh"
| #define VERSION "0.9.1pre"
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_DLFCN_H 1
| #define LT_OBJDIR ".libs/"
| #define MAJOR_VERSION 0
| #define MINOR_VERSION 9
| #define MICRO_VERSION 1
| #define LIB_VERSION "0.9.1pre"
| #define LIB_RELEASE ""
| #define CXX "mpicxx"
| #define IO_COMPATIBILITY_VERSION "0.7.4"
| #define HAVE_NAMESPACES /**/
| #define DEFAULT_DOUBLE_PRECISION 1
| #define DEFAULT_SCALAR_TYPE double
| #define restrict __restrict
| #define HAVE_GETPWUID 1
| #define ENABLE_EXCEPTIONS 1
| #define SIZEOF_SHORT_INT 2
| #define SIZEOF_INT 4
| #define SIZEOF_UNSIGNED_INT 4
| #define SIZEOF_LONG_INT 8
| #define SIZEOF_FLOAT 4
| #define SIZEOF_DOUBLE 8
| #define SIZEOF_VOID_P 8
| #define SIZEOF_FUNCTION_POINTER 8
| #define HAVE_RTTI /**/
| #define HAVE_GETOPT_H 1
| #define HAVE_CSIGNAL 1
| #define HAVE_SYS_RESOURCE_H 1
| #define HAVE_LOCALE /**/
| #define HAVE_SSTREAM /**/
| #define HAVE_STRINGSTREAM /**/
| #define HAVE_FENV_H 1
| #define HAVE_XMMINTRIN_H 1
| /* end confdefs.h. */
| #include <fenv.h>
| int
| main ()
| {
| fedisableexcept(FE_DIVBYZERO | FE_INVALID);
| ;
| return 0;
| }
configure:24748: checking whether the compiler supports std::unordered_multimap
configure:24776: mpicxx -c conftest.cpp >&5
conftest.cpp:54:25: error: unordered_map: No such file or directory
conftest.cpp: In function 'int main()':
conftest.cpp:59: error: 'unordered_multimap' is not a member of 'std'
conftest.cpp:59: error: expected primary-expression before 'int'
conftest.cpp:59: error: expected `;' before 'int'
conftest.cpp:60: error: 'm' was not declared in this scope
conftest.cpp:60: error: 'make_pair' is not a member of 'std'
conftest.cpp:61: error: 'make_pair' is not a member of 'std'
configure:24776: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "libmesh"
| #define PACKAGE_TARNAME "libmesh"
| #define PACKAGE_VERSION "0.9.1pre"
| #define PACKAGE_STRING "libmesh 0.9.1pre"
| #define PACKAGE_BUGREPORT "libmesh-users@lists.sourceforge.net"
| #define PACKAGE_URL "http://libmesh.sourceforge.net"
| #define CONFIGURE_INFO "./configure '--disable-tecplot' '--enable-tecio' '--with-netcdf=old' '--with-exodus=old' '--with-nemesis=old'"
| #define PACKAGE "libmesh"
| #define VERSION "0.9.1pre"
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_DLFCN_H 1
| #define LT_OBJDIR ".libs/"
| #define MAJOR_VERSION 0
| #define MINOR_VERSION 9
| #define MICRO_VERSION 1
| #define LIB_VERSION "0.9.1pre"
| #define LIB_RELEASE ""
| #define CXX "mpicxx"
| #define IO_COMPATIBILITY_VERSION "0.7.4"
| #define HAVE_NAMESPACES /**/
| #define DEFAULT_DOUBLE_PRECISION 1
| #define DEFAULT_SCALAR_TYPE double
| #define restrict __restrict
| #define HAVE_GETPWUID 1
| #define ENABLE_EXCEPTIONS 1
| #define SIZEOF_SHORT_INT 2
| #define SIZEOF_INT 4
| #define SIZEOF_UNSIGNED_INT 4
| #define SIZEOF_LONG_INT 8
| #define SIZEOF_FLOAT 4
| #define SIZEOF_DOUBLE 8
| #define SIZEOF_VOID_P 8
| #define SIZEOF_FUNCTION_POINTER 8
| #define HAVE_RTTI /**/
| #define HAVE_GETOPT_H 1
| #define HAVE_CSIGNAL 1
| #define HAVE_SYS_RESOURCE_H 1
| #define HAVE_LOCALE /**/
| #define HAVE_SSTREAM /**/
| #define HAVE_STRINGSTREAM /**/
| #define HAVE_FENV_H 1
| #define HAVE_XMMINTRIN_H 1
| /* end confdefs.h. */
| #include <unordered_map>
| int
| main ()
| {
|
| std::unordered_multimap<int, int> m;
| m.insert(std::make_pair(1, 2));
| m.insert(std::make_pair(1, 3));
| if (m.size() != 2) return 1;
|
| ;
| return 0;
| }
configure:24790: result: no
configure:24813: checking whether the compiler supports std::tr1::unordered_multimap
configure:24841: mpicxx -c conftest.cpp >&5
configure:24841: $? = 0
configure:24855: result: yes
configure:25078: checking whether the compiler supports std::unordered_map
configure:25104: mpicxx -c conftest.cpp >&5
conftest.cpp:59:25: error: unordered_map: No such file or directory
conftest.cpp: In function 'int main()':
conftest.cpp:64: error: 'unordered_map' is not a member of 'std'
conftest.cpp:64: error: expected primary-expression before 'int'
conftest.cpp:64: error: expected `;' before 'int'
conftest.cpp:65: error: 'm' was not declared in this scope
conftest.cpp:65: error: 'make_pair' is not a member of 'std'
configure:25104: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "libmesh"
| #define PACKAGE_TARNAME "libmesh"
| #define PACKAGE_VERSION "0.9.1pre"
| #define PACKAGE_STRING "libmesh 0.9.1pre"
| #define PACKAGE_BUGREPORT "libmesh-users@lists.sourceforge.net"
| #define PACKAGE_URL "http://libmesh.sourceforge.net"
| #define CONFIGURE_INFO "./configure '--disable-tecplot' '--enable-tecio' '--with-netcdf=old' '--with-exodus=old' '--with-nemesis=old'"
| #define PACKAGE "libmesh"
| #define VERSION "0.9.1pre"
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_DLFCN_H 1
| #define LT_OBJDIR ".libs/"
| #define MAJOR_VERSION 0
| #define MINOR_VERSION 9
| #define MICRO_VERSION 1
| #define LIB_VERSION "0.9.1pre"
| #define LIB_RELEASE ""
| #define CXX "mpicxx"
| #define IO_COMPATIBILITY_VERSION "0.7.4"
| #define HAVE_NAMESPACES /**/
| #define DEFAULT_DOUBLE_PRECISION 1
| #define DEFAULT_SCALAR_TYPE double
| #define restrict __restrict
| #define HAVE_GETPWUID 1
| #define ENABLE_EXCEPTIONS 1
| #define SIZEOF_SHORT_INT 2
| #define SIZEOF_INT 4
| #define SIZEOF_UNSIGNED_INT 4
| #define SIZEOF_LONG_INT 8
| #define SIZEOF_FLOAT 4
| #define SIZEOF_DOUBLE 8
| #define SIZEOF_VOID_P 8
| #define SIZEOF_FUNCTION_POINTER 8
| #define HAVE_RTTI /**/
| #define HAVE_GETOPT_H 1
| #define HAVE_CSIGNAL 1
| #define HAVE_SYS_RESOURCE_H 1
| #define HAVE_LOCALE /**/
| #define HAVE_SSTREAM /**/
| #define HAVE_STRINGSTREAM /**/
| #define HAVE_FENV_H 1
| #define HAVE_XMMINTRIN_H 1
| #define HAVE_TR1_UNORDERED_MULTIMAP 1
| #define BEST_UNORDERED_MULTIMAP std::tr1::unordered_multimap
| #define INCLUDE_UNORDERED_MULTIMAP <tr1/unordered_map>
| #define DEFINE_HASH_STRING /**/
| #define DEFINE_HASH_POINTERS /**/
| /* end confdefs.h. */
| #include <unordered_map>
| int
| main ()
| {
|
| std::unordered_map<int, int> m;
| m.insert(std::make_pair(1, 2));
|
| ;
| return 0;
| }
configure:25118: result: no
configure:25141: checking whether the compiler supports std::tr1::unordered_map
configure:25167: mpicxx -c conftest.cpp >&5
configure:25167: $? = 0
configure:25181: result: yes
configure:25402: checking whether the compiler supports std::unordered_set
configure:25428: mpicxx -c conftest.cpp >&5
conftest.cpp:64:25: error: unordered_set: No such file or directory
conftest.cpp: In function 'int main()':
conftest.cpp:69: error: 'unordered_set' is not a member of 'std'
conftest.cpp:69: error: expected primary-expression before 'int'
conftest.cpp:69: error: expected `;' before 'int'
conftest.cpp:70: error: 'm' was not declared in this scope
conftest.cpp:70: error: 'make_pair' is not a member of 'std'
configure:25428: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "libmesh"
| #define PACKAGE_TARNAME "libmesh"
| #define PACKAGE_VERSION "0.9.1pre"
| #define PACKAGE_STRING "libmesh 0.9.1pre"
| #define PACKAGE_BUGREPORT "libmesh-users@lists.sourceforge.net"
| #define PACKAGE_URL "http://libmesh.sourceforge.net"
| #define CONFIGURE_INFO "./configure '--disable-tecplot' '--enable-tecio' '--with-netcdf=old' '--with-exodus=old' '--with-nemesis=old'"
| #define PACKAGE "libmesh"
| #define VERSION "0.9.1pre"
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_DLFCN_H 1
| #define LT_OBJDIR ".libs/"
| #define MAJOR_VERSION 0
| #define MINOR_VERSION 9
| #define MICRO_VERSION 1
| #define LIB_VERSION "0.9.1pre"
| #define LIB_RELEASE ""
| #define CXX "mpicxx"
| #define IO_COMPATIBILITY_VERSION "0.7.4"
| #define HAVE_NAMESPACES /**/
| #define DEFAULT_DOUBLE_PRECISION 1
| #define DEFAULT_SCALAR_TYPE double
| #define restrict __restrict
| #define HAVE_GETPWUID 1
| #define ENABLE_EXCEPTIONS 1
| #define SIZEOF_SHORT_INT 2
| #define SIZEOF_INT 4
| #define SIZEOF_UNSIGNED_INT 4
| #define SIZEOF_LONG_INT 8
| #define SIZEOF_FLOAT 4
| #define SIZEOF_DOUBLE 8
| #define SIZEOF_VOID_P 8
| #define SIZEOF_FUNCTION_POINTER 8
| #define HAVE_RTTI /**/
| #define HAVE_GETOPT_H 1
| #define HAVE_CSIGNAL 1
| #define HAVE_SYS_RESOURCE_H 1
| #define HAVE_LOCALE /**/
| #define HAVE_SSTREAM /**/
| #define HAVE_STRINGSTREAM /**/
| #define HAVE_FENV_H 1
| #define HAVE_XMMINTRIN_H 1
| #define HAVE_TR1_UNORDERED_MULTIMAP 1
| #define BEST_UNORDERED_MULTIMAP std::tr1::unordered_multimap
| #define INCLUDE_UNORDERED_MULTIMAP <tr1/unordered_map>
| #define DEFINE_HASH_STRING /**/
| #define DEFINE_HASH_POINTERS /**/
| #define HAVE_TR1_UNORDERED_MAP 1
| #define BEST_UNORDERED_MAP std::tr1::unordered_map
| #define INCLUDE_UNORDERED_MAP <tr1/unordered_map>
| #define DEFINE_HASH_STRING /**/
| #define DEFINE_HASH_POINTERS /**/
| /* end confdefs.h. */
| #include <unordered_set>
| int
| main ()
| {
|
| std::unordered_set<int, int> m;
| m.insert(std::make_pair(1, 2));
|
| ;
| return 0;
| }
configure:25442: result: no
configure:25465: checking whether the compiler supports std::tr1::unordered_set
configure:25491: mpicxx -c conftest.cpp >&5
configure:25491: $? = 0
configure:25505: result: yes
configure:25919: checking for dlfcn.h
configure:25919: result: yes
configure:25929: checking whether the compiler supports GCC C++ ABI name demangling
configure:25967: mpicxx -c conftest.cpp >&5
configure:25967: $? = 0
configure:25981: result: yes
configure:25989: checking whether the c++ compiler supports glibc backtrace
configure:26015: mpicxx -c conftest.cpp >&5
configure:26015: $? = 0
configure:26029: result: yes
configure:26054: checking for OpenMP flag of C++ compiler
configure:26090: mpicxx -o conftest -fopenmp conftest.cpp >&5
configure:26090: $? = 0
configure:26099: result: -fopenmp
configure:26114: result: <<< Configuring library with OpenMP support >>>
configure:26138: result: ---------------------------------------------
configure:26140: result: ----- Done configuring compiler features ----
configure:26142: result: ---------------------------------------------
configure:26286: result: ---------------------------------------------
configure:26288: result: ----- Configuring core library features -----
configure:26290: result: ---------------------------------------------
configure:26312: result: <<< Configuring library to require ``include "libmesh/etc.h"'' style >>>
configure:26335: result: <<< Configuring library to keep names in libMesh namespace >>>
configure:26387: result: configuring size of boundary_id... 2
configure:26435: result: configuring size of dof_id... 4
configure:26483: result: configuring size of processor_id... 2
configure:26531: result: configuring size of subdomain_id... 2
configure:26595: result: <<< Configuring library with AMR support >>>
configure:26617: result: <<< Configuring library with variational smoother support >>>
configure:26639: result: <<< Configuring library with periodic BC support >>>
configure:26661: result: <<< Configuring library with Dirichlet constraint support >>>
configure:26727: result: <<< Configuring library to use ghosted local vectors >>>
configure:26785: result: <<< Configuring library with higher order p-FEM shapes >>>
configure:26839: result: <<< Configuring library with second derivatives >>>
configure:26860: checking rpc/rpc.h usability
configure:26860: mpicxx -c conftest.cpp >&5
configure:26860: $? = 0
configure:26860: result: yes
configure:26860: checking rpc/rpc.h presence
configure:26860: mpicxx -E conftest.cpp
configure:26860: $? = 0
configure:26860: result: yes
configure:26860: checking for rpc/rpc.h
configure:26860: result: yes
configure:26866: checking for xdrstdio_create
configure:26866: mpicxx -o conftest conftest.cpp >&5
configure:26866: $? = 0
configure:26866: result: yes
configure:26916: result: <<< Configuring library with real number support >>>
configure:26948: result: <<< Configuring library with reference counting support >>>
configure:26997: result: <<< Configuring library example suite support >>>
configure:27010: result: ---------------------------------------------
configure:27012: result: -- Done configuring core library features ---
configure:27014: result: ---------------------------------------------
configure:27066: result: ---------------------------------------------
configure:27068: result: ----- Configuring for optional packages -----
configure:27070: result: ---------------------------------------------
configure:27166: checking for boostlib >= 1.20.0
configure:27237: mpicxx -c conftest.cpp >&5
conftest.cpp:90:33: error: boost/version.hpp: No such file or directory
conftest.cpp:99:8: error: #error Boost version is too old
configure:27237: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "libmesh"
| #define PACKAGE_TARNAME "libmesh"
| #define PACKAGE_VERSION "0.9.1pre"
| #define PACKAGE_STRING "libmesh 0.9.1pre"
| #define PACKAGE_BUGREPORT "libmesh-users@lists.sourceforge.net"
| #define PACKAGE_URL "http://libmesh.sourceforge.net"
| #define CONFIGURE_INFO "./configure '--disable-tecplot' '--enable-tecio' '--with-netcdf=old' '--with-exodus=old' '--with-nemesis=old'"
| #define PACKAGE "libmesh"
| #define VERSION "0.9.1pre"
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_DLFCN_H 1
| #define LT_OBJDIR ".libs/"
| #define MAJOR_VERSION 0
| #define MINOR_VERSION 9
| #define MICRO_VERSION 1
| #define LIB_VERSION "0.9.1pre"
| #define LIB_RELEASE ""
| #define CXX "mpicxx"
| #define IO_COMPATIBILITY_VERSION "0.7.4"
| #define HAVE_NAMESPACES /**/
| #define DEFAULT_DOUBLE_PRECISION 1
| #define DEFAULT_SCALAR_TYPE double
| #define restrict __restrict
| #define HAVE_GETPWUID 1
| #define ENABLE_EXCEPTIONS 1
| #define SIZEOF_SHORT_INT 2
| #define SIZEOF_INT 4
| #define SIZEOF_UNSIGNED_INT 4
| #define SIZEOF_LONG_INT 8
| #define SIZEOF_FLOAT 4
| #define SIZEOF_DOUBLE 8
| #define SIZEOF_VOID_P 8
| #define SIZEOF_FUNCTION_POINTER 8
| #define HAVE_RTTI /**/
| #define HAVE_GETOPT_H 1
| #define HAVE_CSIGNAL 1
| #define HAVE_SYS_RESOURCE_H 1
| #define HAVE_LOCALE /**/
| #define HAVE_SSTREAM /**/
| #define HAVE_STRINGSTREAM /**/
| #define HAVE_FENV_H 1
| #define HAVE_XMMINTRIN_H 1
| #define HAVE_TR1_UNORDERED_MULTIMAP 1
| #define BEST_UNORDERED_MULTIMAP std::tr1::unordered_multimap
| #define INCLUDE_UNORDERED_MULTIMAP <tr1/unordered_map>
| #define DEFINE_HASH_STRING /**/
| #define DEFINE_HASH_POINTERS /**/
| #define HAVE_TR1_UNORDERED_MAP 1
| #define BEST_UNORDERED_MAP std::tr1::unordered_map
| #define INCLUDE_UNORDERED_MAP <tr1/unordered_map>
| #define DEFINE_HASH_STRING /**/
| #define DEFINE_HASH_POINTERS /**/
| #define HAVE_TR1_UNORDERED_SET 1
| #define BEST_UNORDERED_SET std::tr1::unordered_set
| #define INCLUDE_UNORDERED_SET <tr1/unordered_set>
| #define DEFINE_HASH_STRING /**/
| #define DEFINE_HASH_POINTERS /**/
| #define HAVE_DLFCN_H 1
| #define HAVE_GCC_ABI_DEMANGLE 1
| #define HAVE_GLIBC_BACKTRACE 1
| #define HAVE_OPENMP 1
| #define REQUIRE_SEPARATE_NAMESPACE 1
| #define BOUNDARY_ID_BYTES 2
| #define DOF_ID_BYTES 4
| #define PROCESSOR_ID_BYTES 2
| #define SUBDOMAIN_ID_BYTES 2
| #define ENABLE_AMR 1
| #define ENABLE_VSMOOTHER 1
| #define ENABLE_PERIODIC 1
| #define ENABLE_DIRICHLET 1
| #define ENABLE_GHOSTED 1
| #define ENABLE_HIGHER_ORDER_SHAPES 1
| #define ENABLE_SECOND_DERIVATIVES 1
| #define HAVE_RPC_RPC_H 1
| #define HAVE_XDR 1
| #define USE_REAL_NUMBERS 1
| #define ENABLE_REFERENCE_COUNTING 1
| /* end confdefs.h. */
|
| #include <boost/version.hpp>
|
| int
| main ()
| {
|
| #if BOOST_VERSION >= 102000
| // Everything is okay
| #else
| # error Boost version is too old
| #endif
|
| ;
| return 0;
| }
configure:27343: mpicxx -c -I/include/boost-0 conftest.cpp >&5
conftest.cpp:90:37: error: boost/version.hpp: No such file or directory
conftest.cpp:99:12: error: #error Boost version is too old
configure:27343: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "libmesh"
| #define PACKAGE_TARNAME "libmesh"
| #define PACKAGE_VERSION "0.9.1pre"
| #define PACKAGE_STRING "libmesh 0.9.1pre"
| #define PACKAGE_BUGREPORT "libmesh-users@lists.sourceforge.net"
| #define PACKAGE_URL "http://libmesh.sourceforge.net"
| #define CONFIGURE_INFO "./configure '--disable-tecplot' '--enable-tecio' '--with-netcdf=old' '--with-exodus=old' '--with-nemesis=old'"
| #define PACKAGE "libmesh"
| #define VERSION "0.9.1pre"
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_DLFCN_H 1
| #define LT_OBJDIR ".libs/"
| #define MAJOR_VERSION 0
| #define MINOR_VERSION 9
| #define MICRO_VERSION 1
| #define LIB_VERSION "0.9.1pre"
| #define LIB_RELEASE ""
| #define CXX "mpicxx"
| #define IO_COMPATIBILITY_VERSION "0.7.4"
| #define HAVE_NAMESPACES /**/
| #define DEFAULT_DOUBLE_PRECISION 1
| #define DEFAULT_SCALAR_TYPE double
| #define restrict __restrict
| #define HAVE_GETPWUID 1
| #define ENABLE_EXCEPTIONS 1
| #define SIZEOF_SHORT_INT 2
| #define SIZEOF_INT 4
| #define SIZEOF_UNSIGNED_INT 4
| #define SIZEOF_LONG_INT 8
| #define SIZEOF_FLOAT 4
| #define SIZEOF_DOUBLE 8
| #define SIZEOF_VOID_P 8
| #define SIZEOF_FUNCTION_POINTER 8
| #define HAVE_RTTI /**/
| #define HAVE_GETOPT_H 1
| #define HAVE_CSIGNAL 1
| #define HAVE_SYS_RESOURCE_H 1
| #define HAVE_LOCALE /**/
| #define HAVE_SSTREAM /**/
| #define HAVE_STRINGSTREAM /**/
| #define HAVE_FENV_H 1
| #define HAVE_XMMINTRIN_H 1
| #define HAVE_TR1_UNORDERED_MULTIMAP 1
| #define BEST_UNORDERED_MULTIMAP std::tr1::unordered_multimap
| #define INCLUDE_UNORDERED_MULTIMAP <tr1/unordered_map>
| #define DEFINE_HASH_STRING /**/
| #define DEFINE_HASH_POINTERS /**/
| #define HAVE_TR1_UNORDERED_MAP 1
| #define BEST_UNORDERED_MAP std::tr1::unordered_map
| #define INCLUDE_UNORDERED_MAP <tr1/unordered_map>
| #define DEFINE_HASH_STRING /**/
| #define DEFINE_HASH_POINTERS /**/
| #define HAVE_TR1_UNORDERED_SET 1
| #define BEST_UNORDERED_SET std::tr1::unordered_set
| #define INCLUDE_UNORDERED_SET <tr1/unordered_set>
| #define DEFINE_HASH_STRING /**/
| #define DEFINE_HASH_POINTERS /**/
| #define HAVE_DLFCN_H 1
| #define HAVE_GCC_ABI_DEMANGLE 1
| #define HAVE_GLIBC_BACKTRACE 1
| #define HAVE_OPENMP 1
| #define REQUIRE_SEPARATE_NAMESPACE 1
| #define BOUNDARY_ID_BYTES 2
| #define DOF_ID_BYTES 4
| #define PROCESSOR_ID_BYTES 2
| #define SUBDOMAIN_ID_BYTES 2
| #define ENABLE_AMR 1
| #define ENABLE_VSMOOTHER 1
| #define ENABLE_PERIODIC 1
| #define ENABLE_DIRICHLET 1
| #define ENABLE_GHOSTED 1
| #define ENABLE_HIGHER_ORDER_SHAPES 1
| #define ENABLE_SECOND_DERIVATIVES 1
| #define HAVE_RPC_RPC_H 1
| #define HAVE_XDR 1
| #define USE_REAL_NUMBERS 1
| #define ENABLE_REFERENCE_COUNTING 1
| /* end confdefs.h. */
|
| #include <boost/version.hpp>
|
| int
| main ()
| {
|
| #if BOOST_VERSION >= 102000
| // Everything is okay
| #else
| # error Boost version is too old
| #endif
|
| ;
| return 0;
| }
configure:27362: We could not detect the boost libraries (version 1.20 or higher). If you have a staged boost library (still not installed) please specify $BOOST_ROOT in your environment and do not give a PATH to --with-boost option. If you are sure you have boost installed, then check your version number looking in <boost/version.hpp>. See http://randspringer.de/boost for more documentation.
configure:27389: result: <<< External boost installation *not* found... will try to configure for libmesh's internal boost >>>
configure:27447: checking for boostlib >= 1.20.0
configure:27518: mpicxx -c -I./contrib/boost/include conftest.cpp >&5
configure:27518: $? = 0
configure:27520: result: yes
configure:27658: result: <<< Using libmesh-provided boost in ./contrib >>>
configure:27732: checking for petscarch
configure:27765: result: no
configure:27791: checking /include/petscversion.h usability
configure:27791: mpicc -c conftest.c >&5
conftest.c:123:35: error: /include/petscversion.h: No such file or directory
configure:27791: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "libmesh"
| #define PACKAGE_TARNAME "libmesh"
| #define PACKAGE_VERSION "0.9.1pre"
| #define PACKAGE_STRING "libmesh 0.9.1pre"
| #define PACKAGE_BUGREPORT "libmesh-users@lists.sourceforge.net"
| #define PACKAGE_URL "http://libmesh.sourceforge.net"
| #define CONFIGURE_INFO "./configure '--disable-tecplot' '--enable-tecio' '--with-netcdf=old' '--with-exodus=old' '--with-nemesis=old'"
| #define PACKAGE "libmesh"
| #define VERSION "0.9.1pre"
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_DLFCN_H 1
| #define LT_OBJDIR ".libs/"
| #define MAJOR_VERSION 0
| #define MINOR_VERSION 9
| #define MICRO_VERSION 1
| #define LIB_VERSION "0.9.1pre"
| #define LIB_RELEASE ""
| #define CXX "mpicxx"
| #define IO_COMPATIBILITY_VERSION "0.7.4"
| #define HAVE_NAMESPACES /**/
| #define DEFAULT_DOUBLE_PRECISION 1
| #define DEFAULT_SCALAR_TYPE double
| #define restrict __restrict
| #define HAVE_GETPWUID 1
| #define ENABLE_EXCEPTIONS 1
| #define SIZEOF_SHORT_INT 2
| #define SIZEOF_INT 4
| #define SIZEOF_UNSIGNED_INT 4
| #define SIZEOF_LONG_INT 8
| #define SIZEOF_FLOAT 4
| #define SIZEOF_DOUBLE 8
| #define SIZEOF_VOID_P 8
| #define SIZEOF_FUNCTION_POINTER 8
| #define HAVE_RTTI /**/
| #define HAVE_GETOPT_H 1
| #define HAVE_CSIGNAL 1
| #define HAVE_SYS_RESOURCE_H 1
| #define HAVE_LOCALE /**/
| #define HAVE_SSTREAM /**/
| #define HAVE_STRINGSTREAM /**/
| #define HAVE_FENV_H 1
| #define HAVE_XMMINTRIN_H 1
| #define HAVE_TR1_UNORDERED_MULTIMAP 1
| #define BEST_UNORDERED_MULTIMAP std::tr1::unordered_multimap
| #define INCLUDE_UNORDERED_MULTIMAP <tr1/unordered_map>
| #define DEFINE_HASH_STRING /**/
| #define DEFINE_HASH_POINTERS /**/
| #define HAVE_TR1_UNORDERED_MAP 1
| #define BEST_UNORDERED_MAP std::tr1::unordered_map
| #define INCLUDE_UNORDERED_MAP <tr1/unordered_map>
| #define DEFINE_HASH_STRING /**/
| #define DEFINE_HASH_POINTERS /**/
| #define HAVE_TR1_UNORDERED_SET 1
| #define BEST_UNORDERED_SET std::tr1::unordered_set
| #define INCLUDE_UNORDERED_SET <tr1/unordered_set>
| #define DEFINE_HASH_STRING /**/
| #define DEFINE_HASH_POINTERS /**/
| #define HAVE_DLFCN_H 1
| #define HAVE_GCC_ABI_DEMANGLE 1
| #define HAVE_GLIBC_BACKTRACE 1
| #define HAVE_OPENMP 1
| #define REQUIRE_SEPARATE_NAMESPACE 1
| #define BOUNDARY_ID_BYTES 2
| #define DOF_ID_BYTES 4
| #define PROCESSOR_ID_BYTES 2
| #define SUBDOMAIN_ID_BYTES 2
| #define ENABLE_AMR 1
| #define ENABLE_VSMOOTHER 1
| #define ENABLE_PERIODIC 1
| #define ENABLE_DIRICHLET 1
| #define ENABLE_GHOSTED 1
| #define ENABLE_HIGHER_ORDER_SHAPES 1
| #define ENABLE_SECOND_DERIVATIVES 1
| #define HAVE_RPC_RPC_H 1
| #define HAVE_XDR 1
| #define USE_REAL_NUMBERS 1
| #define ENABLE_REFERENCE_COUNTING 1
| #define HAVE_BOOST /**/
| /* end confdefs.h. */
| #include <stdio.h>
| #ifdef HAVE_SYS_TYPES_H
| # include <sys/types.h>
| #endif
| #ifdef HAVE_SYS_STAT_H
| # include <sys/stat.h>
| #endif
| #ifdef STDC_HEADERS
| # include <stdlib.h>
| # include <stddef.h>
| #else
| # ifdef HAVE_STDLIB_H
| # include <stdlib.h>
| # endif
| #endif
| #ifdef HAVE_STRING_H
| # if !defined STDC_HEADERS && defined HAVE_MEMORY_H
| # include <memory.h>
| # endif
| # include <string.h>
| #endif
| #ifdef HAVE_STRINGS_H
| # include <strings.h>
| #endif
| #ifdef HAVE_INTTYPES_H
| # include <inttypes.h>
| #endif
| #ifdef HAVE_STDINT_H
| # include <stdint.h>
| #endif
| #ifdef HAVE_UNISTD_H
| # include <unistd.h>
| #endif
| #include </include/petscversion.h>
configure:27791: result: no
configure:27791: checking /include/petscversion.h presence
configure:27791: mpicc -E conftest.c
conftest.c:90:35: error: /include/petscversion.h: No such file or directory
configure:27791: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "libmesh"
| #define PACKAGE_TARNAME "libmesh"
| #define PACKAGE_VERSION "0.9.1pre"
| #define PACKAGE_STRING "libmesh 0.9.1pre"
| #define PACKAGE_BUGREPORT "libmesh-users@lists.sourceforge.net"
| #define PACKAGE_URL "http://libmesh.sourceforge.net"
| #define CONFIGURE_INFO "./configure '--disable-tecplot' '--enable-tecio' '--with-netcdf=old' '--with-exodus=old' '--with-nemesis=old'"
| #define PACKAGE "libmesh"
| #define VERSION "0.9.1pre"
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_DLFCN_H 1
| #define LT_OBJDIR ".libs/"
| #define MAJOR_VERSION 0
| #define MINOR_VERSION 9
| #define MICRO_VERSION 1
| #define LIB_VERSION "0.9.1pre"
| #define LIB_RELEASE ""
| #define CXX "mpicxx"
| #define IO_COMPATIBILITY_VERSION "0.7.4"
| #define HAVE_NAMESPACES /**/
| #define DEFAULT_DOUBLE_PRECISION 1
| #define DEFAULT_SCALAR_TYPE double
| #define restrict __restrict
| #define HAVE_GETPWUID 1
| #define ENABLE_EXCEPTIONS 1
| #define SIZEOF_SHORT_INT 2
| #define SIZEOF_INT 4
| #define SIZEOF_UNSIGNED_INT 4
| #define SIZEOF_LONG_INT 8
| #define SIZEOF_FLOAT 4
| #define SIZEOF_DOUBLE 8
| #define SIZEOF_VOID_P 8
| #define SIZEOF_FUNCTION_POINTER 8
| #define HAVE_RTTI /**/
| #define HAVE_GETOPT_H 1
| #define HAVE_CSIGNAL 1
| #define HAVE_SYS_RESOURCE_H 1
| #define HAVE_LOCALE /**/
| #define HAVE_SSTREAM /**/
| #define HAVE_STRINGSTREAM /**/
| #define HAVE_FENV_H 1
| #define HAVE_XMMINTRIN_H 1
| #define HAVE_TR1_UNORDERED_MULTIMAP 1
| #define BEST_UNORDERED_MULTIMAP std::tr1::unordered_multimap
| #define INCLUDE_UNORDERED_MULTIMAP <tr1/unordered_map>
| #define DEFINE_HASH_STRING /**/
| #define DEFINE_HASH_POINTERS /**/
| #define HAVE_TR1_UNORDERED_MAP 1
| #define BEST_UNORDERED_MAP std::tr1::unordered_map
| #define INCLUDE_UNORDERED_MAP <tr1/unordered_map>
| #define DEFINE_HASH_STRING /**/
| #define DEFINE_HASH_POINTERS /**/
| #define HAVE_TR1_UNORDERED_SET 1
| #define BEST_UNORDERED_SET std::tr1::unordered_set
| #define INCLUDE_UNORDERED_SET <tr1/unordered_set>
| #define DEFINE_HASH_STRING /**/
| #define DEFINE_HASH_POINTERS /**/
| #define HAVE_DLFCN_H 1
| #define HAVE_GCC_ABI_DEMANGLE 1
| #define HAVE_GLIBC_BACKTRACE 1
| #define HAVE_OPENMP 1
| #define REQUIRE_SEPARATE_NAMESPACE 1
| #define BOUNDARY_ID_BYTES 2
| #define DOF_ID_BYTES 4
| #define PROCESSOR_ID_BYTES 2
| #define SUBDOMAIN_ID_BYTES 2
| #define ENABLE_AMR 1
| #define ENABLE_VSMOOTHER 1
| #define ENABLE_PERIODIC 1
| #define ENABLE_DIRICHLET 1
| #define ENABLE_GHOSTED 1
| #define ENABLE_HIGHER_ORDER_SHAPES 1
| #define ENABLE_SECOND_DERIVATIVES 1
| #define HAVE_RPC_RPC_H 1
| #define HAVE_XDR 1
| #define USE_REAL_NUMBERS 1
| #define ENABLE_REFERENCE_COUNTING 1
| #define HAVE_BOOST /**/
| /* end confdefs.h. */
| #include </include/petscversion.h>
configure:27791: result: no
configure:27791: checking for /include/petscversion.h
configure:27791: result: no
configure:27968: result: <<< PETSc disabled. Will try configuring MPI now... >>>
configure:28458: mpicxx -c conftest.cpp >&5
configure:28458: $? = 0
configure:28461: result: mpicxx Compiler Supports MPI
configure:29796: checking /usr/include/tbb/task_scheduler_init.h usability
configure:29796: mpicxx -c conftest.cpp >&5
conftest.cpp:124:50: error: /usr/include/tbb/task_scheduler_init.h: No such file or directory
configure:29796: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "libmesh"
| #define PACKAGE_TARNAME "libmesh"
| #define PACKAGE_VERSION "0.9.1pre"
| #define PACKAGE_STRING "libmesh 0.9.1pre"
| #define PACKAGE_BUGREPORT "libmesh-users@lists.sourceforge.net"
| #define PACKAGE_URL "http://libmesh.sourceforge.net"
| #define CONFIGURE_INFO "./configure '--disable-tecplot' '--enable-tecio' '--with-netcdf=old' '--with-exodus=old' '--with-nemesis=old'"
| #define PACKAGE "libmesh"
| #define VERSION "0.9.1pre"
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_DLFCN_H 1
| #define LT_OBJDIR ".libs/"
| #define MAJOR_VERSION 0
| #define MINOR_VERSION 9
| #define MICRO_VERSION 1
| #define LIB_VERSION "0.9.1pre"
| #define LIB_RELEASE ""
| #define CXX "mpicxx"
| #define IO_COMPATIBILITY_VERSION "0.7.4"
| #define HAVE_NAMESPACES /**/
| #define DEFAULT_DOUBLE_PRECISION 1
| #define DEFAULT_SCALAR_TYPE double
| #define restrict __restrict
| #define HAVE_GETPWUID 1
| #define ENABLE_EXCEPTIONS 1
| #define SIZEOF_SHORT_INT 2
| #define SIZEOF_INT 4
| #define SIZEOF_UNSIGNED_INT 4
| #define SIZEOF_LONG_INT 8
| #define SIZEOF_FLOAT 4
| #define SIZEOF_DOUBLE 8
| #define SIZEOF_VOID_P 8
| #define SIZEOF_FUNCTION_POINTER 8
| #define HAVE_RTTI /**/
| #define HAVE_GETOPT_H 1
| #define HAVE_CSIGNAL 1
| #define HAVE_SYS_RESOURCE_H 1
| #define HAVE_LOCALE /**/
| #define HAVE_SSTREAM /**/
| #define HAVE_STRINGSTREAM /**/
| #define HAVE_FENV_H 1
| #define HAVE_XMMINTRIN_H 1
| #define HAVE_TR1_UNORDERED_MULTIMAP 1
| #define BEST_UNORDERED_MULTIMAP std::tr1::unordered_multimap
| #define INCLUDE_UNORDERED_MULTIMAP <tr1/unordered_map>
| #define DEFINE_HASH_STRING /**/
| #define DEFINE_HASH_POINTERS /**/
| #define HAVE_TR1_UNORDERED_MAP 1
| #define BEST_UNORDERED_MAP std::tr1::unordered_map
| #define INCLUDE_UNORDERED_MAP <tr1/unordered_map>
| #define DEFINE_HASH_STRING /**/
| #define DEFINE_HASH_POINTERS /**/
| #define HAVE_TR1_UNORDERED_SET 1
| #define BEST_UNORDERED_SET std::tr1::unordered_set
| #define INCLUDE_UNORDERED_SET <tr1/unordered_set>
| #define DEFINE_HASH_STRING /**/
| #define DEFINE_HASH_POINTERS /**/
| #define HAVE_DLFCN_H 1
| #define HAVE_GCC_ABI_DEMANGLE 1
| #define HAVE_GLIBC_BACKTRACE 1
| #define HAVE_OPENMP 1
| #define REQUIRE_SEPARATE_NAMESPACE 1
| #define BOUNDARY_ID_BYTES 2
| #define DOF_ID_BYTES 4
| #define PROCESSOR_ID_BYTES 2
| #define SUBDOMAIN_ID_BYTES 2
| #define ENABLE_AMR 1
| #define ENABLE_VSMOOTHER 1
| #define ENABLE_PERIODIC 1
| #define ENABLE_DIRICHLET 1
| #define ENABLE_GHOSTED 1
| #define ENABLE_HIGHER_ORDER_SHAPES 1
| #define ENABLE_SECOND_DERIVATIVES 1
| #define HAVE_RPC_RPC_H 1
| #define HAVE_XDR 1
| #define USE_REAL_NUMBERS 1
| #define ENABLE_REFERENCE_COUNTING 1
| #define HAVE_BOOST /**/
| #define HAVE_MPI 1
| /* end confdefs.h. */
| #include <stdio.h>
| #ifdef HAVE_SYS_TYPES_H
| # include <sys/types.h>
| #endif
| #ifdef HAVE_SYS_STAT_H
| # include <sys/stat.h>
| #endif
| #ifdef STDC_HEADERS
| # include <stdlib.h>
| # include <stddef.h>
| #else
| # ifdef HAVE_STDLIB_H
| # include <stdlib.h>
| # endif
| #endif
| #ifdef HAVE_STRING_H
| # if !defined STDC_HEADERS && defined HAVE_MEMORY_H
| # include <memory.h>
| # endif
| # include <string.h>
| #endif
| #ifdef HAVE_STRINGS_H
| # include <strings.h>
| #endif
| #ifdef HAVE_INTTYPES_H
| # include <inttypes.h>
| #endif
| #ifdef HAVE_STDINT_H
| # include <stdint.h>
| #endif
| #ifdef HAVE_UNISTD_H
| # include <unistd.h>
| #endif
| #include </usr/include/tbb/task_scheduler_init.h>
configure:29796: result: no
configure:29796: checking /usr/include/tbb/task_scheduler_init.h presence
configure:29796: mpicxx -E conftest.cpp
conftest.cpp:91:50: error: /usr/include/tbb/task_scheduler_init.h: No such file or directory
configure:29796: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "libmesh"
| #define PACKAGE_TARNAME "libmesh"
| #define PACKAGE_VERSION "0.9.1pre"
| #define PACKAGE_STRING "libmesh 0.9.1pre"
| #define PACKAGE_BUGREPORT "libmesh-users@lists.sourceforge.net"
| #define PACKAGE_URL "http://libmesh.sourceforge.net"
| #define CONFIGURE_INFO "./configure '--disable-tecplot' '--enable-tecio' '--with-netcdf=old' '--with-exodus=old' '--with-nemesis=old'"
| #define PACKAGE "libmesh"
| #define VERSION "0.9.1pre"
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_DLFCN_H 1
| #define LT_OBJDIR ".libs/"
| #define MAJOR_VERSION 0
| #define MINOR_VERSION 9
| #define MICRO_VERSION 1
| #define LIB_VERSION "0.9.1pre"
| #define LIB_RELEASE ""
| #define CXX "mpicxx"
| #define IO_COMPATIBILITY_VERSION "0.7.4"
| #define HAVE_NAMESPACES /**/
| #define DEFAULT_DOUBLE_PRECISION 1
| #define DEFAULT_SCALAR_TYPE double
| #define restrict __restrict
| #define HAVE_GETPWUID 1
| #define ENABLE_EXCEPTIONS 1
| #define SIZEOF_SHORT_INT 2
| #define SIZEOF_INT 4
| #define SIZEOF_UNSIGNED_INT 4
| #define SIZEOF_LONG_INT 8
| #define SIZEOF_FLOAT 4
| #define SIZEOF_DOUBLE 8
| #define SIZEOF_VOID_P 8
| #define SIZEOF_FUNCTION_POINTER 8
| #define HAVE_RTTI /**/
| #define HAVE_GETOPT_H 1
| #define HAVE_CSIGNAL 1
| #define HAVE_SYS_RESOURCE_H 1
| #define HAVE_LOCALE /**/
| #define HAVE_SSTREAM /**/
| #define HAVE_STRINGSTREAM /**/
| #define HAVE_FENV_H 1
| #define HAVE_XMMINTRIN_H 1
| #define HAVE_TR1_UNORDERED_MULTIMAP 1
| #define BEST_UNORDERED_MULTIMAP std::tr1::unordered_multimap
| #define INCLUDE_UNORDERED_MULTIMAP <tr1/unordered_map>
| #define DEFINE_HASH_STRING /**/
| #define DEFINE_HASH_POINTERS /**/
| #define HAVE_TR1_UNORDERED_MAP 1
| #define BEST_UNORDERED_MAP std::tr1::unordered_map
| #define INCLUDE_UNORDERED_MAP <tr1/unordered_map>
| #define DEFINE_HASH_STRING /**/
| #define DEFINE_HASH_POINTERS /**/
| #define HAVE_TR1_UNORDERED_SET 1
| #define BEST_UNORDERED_SET std::tr1::unordered_set
| #define INCLUDE_UNORDERED_SET <tr1/unordered_set>
| #define DEFINE_HASH_STRING /**/
| #define DEFINE_HASH_POINTERS /**/
| #define HAVE_DLFCN_H 1
| #define HAVE_GCC_ABI_DEMANGLE 1
| #define HAVE_GLIBC_BACKTRACE 1
| #define HAVE_OPENMP 1
| #define REQUIRE_SEPARATE_NAMESPACE 1
| #define BOUNDARY_ID_BYTES 2
| #define DOF_ID_BYTES 4
| #define PROCESSOR_ID_BYTES 2
| #define SUBDOMAIN_ID_BYTES 2
| #define ENABLE_AMR 1
| #define ENABLE_VSMOOTHER 1
| #define ENABLE_PERIODIC 1
| #define ENABLE_DIRICHLET 1
| #define ENABLE_GHOSTED 1
| #define ENABLE_HIGHER_ORDER_SHAPES 1
| #define ENABLE_SECOND_DERIVATIVES 1
| #define HAVE_RPC_RPC_H 1
| #define HAVE_XDR 1
| #define USE_REAL_NUMBERS 1
| #define ENABLE_REFERENCE_COUNTING 1
| #define HAVE_BOOST /**/
| #define HAVE_MPI 1
| /* end confdefs.h. */
| #include </usr/include/tbb/task_scheduler_init.h>
configure:29796: result: no
configure:29796: checking for /usr/include/tbb/task_scheduler_init.h
configure:29796: result: no
configure:29896: checking whether the compiler supports std::thread
configure:29922: mpicxx -c conftest.cpp >&5
conftest.cpp:91:18: error: thread: No such file or directory
conftest.cpp: In function 'int main()':
conftest.cpp:96: error: 'thread' is not a member of 'std'
conftest.cpp:96: error: expected `;' before 't'
conftest.cpp:97: error: 't' was not declared in this scope
configure:29922: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "libmesh"
| #define PACKAGE_TARNAME "libmesh"
| #define PACKAGE_VERSION "0.9.1pre"
| #define PACKAGE_STRING "libmesh 0.9.1pre"
| #define PACKAGE_BUGREPORT "libmesh-users@lists.sourceforge.net"
| #define PACKAGE_URL "http://libmesh.sourceforge.net"
| #define CONFIGURE_INFO "./configure '--disable-tecplot' '--enable-tecio' '--with-netcdf=old' '--with-exodus=old' '--with-nemesis=old'"
| #define PACKAGE "libmesh"
| #define VERSION "0.9.1pre"
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_DLFCN_H 1
| #define LT_OBJDIR ".libs/"
| #define MAJOR_VERSION 0
| #define MINOR_VERSION 9
| #define MICRO_VERSION 1
| #define LIB_VERSION "0.9.1pre"
| #define LIB_RELEASE ""
| #define CXX "mpicxx"
| #define IO_COMPATIBILITY_VERSION "0.7.4"
| #define HAVE_NAMESPACES /**/
| #define DEFAULT_DOUBLE_PRECISION 1
| #define DEFAULT_SCALAR_TYPE double
| #define restrict __restrict
| #define HAVE_GETPWUID 1
| #define ENABLE_EXCEPTIONS 1
| #define SIZEOF_SHORT_INT 2
| #define SIZEOF_INT 4
| #define SIZEOF_UNSIGNED_INT 4
| #define SIZEOF_LONG_INT 8
| #define SIZEOF_FLOAT 4
| #define SIZEOF_DOUBLE 8
| #define SIZEOF_VOID_P 8
| #define SIZEOF_FUNCTION_POINTER 8
| #define HAVE_RTTI /**/
| #define HAVE_GETOPT_H 1
| #define HAVE_CSIGNAL 1
| #define HAVE_SYS_RESOURCE_H 1
| #define HAVE_LOCALE /**/
| #define HAVE_SSTREAM /**/
| #define HAVE_STRINGSTREAM /**/
| #define HAVE_FENV_H 1
| #define HAVE_XMMINTRIN_H 1
| #define HAVE_TR1_UNORDERED_MULTIMAP 1
| #define BEST_UNORDERED_MULTIMAP std::tr1::unordered_multimap
| #define INCLUDE_UNORDERED_MULTIMAP <tr1/unordered_map>
| #define DEFINE_HASH_STRING /**/
| #define DEFINE_HASH_POINTERS /**/
| #define HAVE_TR1_UNORDERED_MAP 1
| #define BEST_UNORDERED_MAP std::tr1::unordered_map
| #define INCLUDE_UNORDERED_MAP <tr1/unordered_map>
| #define DEFINE_HASH_STRING /**/
| #define DEFINE_HASH_POINTERS /**/
| #define HAVE_TR1_UNORDERED_SET 1
| #define BEST_UNORDERED_SET std::tr1::unordered_set
| #define INCLUDE_UNORDERED_SET <tr1/unordered_set>
| #define DEFINE_HASH_STRING /**/
| #define DEFINE_HASH_POINTERS /**/
| #define HAVE_DLFCN_H 1
| #define HAVE_GCC_ABI_DEMANGLE 1
| #define HAVE_GLIBC_BACKTRACE 1
| #define HAVE_OPENMP 1
| #define REQUIRE_SEPARATE_NAMESPACE 1
| #define BOUNDARY_ID_BYTES 2
| #define DOF_ID_BYTES 4
| #define PROCESSOR_ID_BYTES 2
| #define SUBDOMAIN_ID_BYTES 2
| #define ENABLE_AMR 1
| #define ENABLE_VSMOOTHER 1
| #define ENABLE_PERIODIC 1
| #define ENABLE_DIRICHLET 1
| #define ENABLE_GHOSTED 1
| #define ENABLE_HIGHER_ORDER_SHAPES 1
| #define ENABLE_SECOND_DERIVATIVES 1
| #define HAVE_RPC_RPC_H 1
| #define HAVE_XDR 1
| #define USE_REAL_NUMBERS 1
| #define ENABLE_REFERENCE_COUNTING 1
| #define HAVE_BOOST /**/
| #define HAVE_MPI 1
| /* end confdefs.h. */
| #include <thread>
| int
| main ()
| {
|
| std::thread t;
| t.join();
|
| ;
| return 0;
| }
configure:29936: result: no
configure:29945: checking whether TBB supports tbb::tbb_thread
configure:29973: mpicxx -c conftest.cpp >&5
conftest.cpp:91:28: error: tbb/tbb_thread.h: No such file or directory
conftest.cpp: In function 'int main()':
conftest.cpp:96: error: 'tbb' has not been declared
conftest.cpp:96: error: expected `;' before 't'
conftest.cpp:97: error: 't' was not declared in this scope
configure:29973: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "libmesh"
| #define PACKAGE_TARNAME "libmesh"
| #define PACKAGE_VERSION "0.9.1pre"
| #define PACKAGE_STRING "libmesh 0.9.1pre"
| #define PACKAGE_BUGREPORT "libmesh-users@lists.sourceforge.net"
| #define PACKAGE_URL "http://libmesh.sourceforge.net"
| #define CONFIGURE_INFO "./configure '--disable-tecplot' '--enable-tecio' '--with-netcdf=old' '--with-exodus=old' '--with-nemesis=old'"
| #define PACKAGE "libmesh"
| #define VERSION "0.9.1pre"
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_DLFCN_H 1
| #define LT_OBJDIR ".libs/"
| #define MAJOR_VERSION 0
| #define MINOR_VERSION 9
| #define MICRO_VERSION 1
| #define LIB_VERSION "0.9.1pre"
| #define LIB_RELEASE ""
| #define CXX "mpicxx"
| #define IO_COMPATIBILITY_VERSION "0.7.4"
| #define HAVE_NAMESPACES /**/
| #define DEFAULT_DOUBLE_PRECISION 1
| #define DEFAULT_SCALAR_TYPE double
| #define restrict __restrict
| #define HAVE_GETPWUID 1
| #define ENABLE_EXCEPTIONS 1
| #define SIZEOF_SHORT_INT 2
| #define SIZEOF_INT 4
| #define SIZEOF_UNSIGNED_INT 4
| #define SIZEOF_LONG_INT 8
| #define SIZEOF_FLOAT 4
| #define SIZEOF_DOUBLE 8
| #define SIZEOF_VOID_P 8
| #define SIZEOF_FUNCTION_POINTER 8
| #define HAVE_RTTI /**/
| #define HAVE_GETOPT_H 1
| #define HAVE_CSIGNAL 1
| #define HAVE_SYS_RESOURCE_H 1
| #define HAVE_LOCALE /**/
| #define HAVE_SSTREAM /**/
| #define HAVE_STRINGSTREAM /**/
| #define HAVE_FENV_H 1
| #define HAVE_XMMINTRIN_H 1
| #define HAVE_TR1_UNORDERED_MULTIMAP 1
| #define BEST_UNORDERED_MULTIMAP std::tr1::unordered_multimap
| #define INCLUDE_UNORDERED_MULTIMAP <tr1/unordered_map>
| #define DEFINE_HASH_STRING /**/
| #define DEFINE_HASH_POINTERS /**/
| #define HAVE_TR1_UNORDERED_MAP 1
| #define BEST_UNORDERED_MAP std::tr1::unordered_map
| #define INCLUDE_UNORDERED_MAP <tr1/unordered_map>
| #define DEFINE_HASH_STRING /**/
| #define DEFINE_HASH_POINTERS /**/
| #define HAVE_TR1_UNORDERED_SET 1
| #define BEST_UNORDERED_SET std::tr1::unordered_set
| #define INCLUDE_UNORDERED_SET <tr1/unordered_set>
| #define DEFINE_HASH_STRING /**/
| #define DEFINE_HASH_POINTERS /**/
| #define HAVE_DLFCN_H 1
| #define HAVE_GCC_ABI_DEMANGLE 1
| #define HAVE_GLIBC_BACKTRACE 1
| #define HAVE_OPENMP 1
| #define REQUIRE_SEPARATE_NAMESPACE 1
| #define BOUNDARY_ID_BYTES 2
| #define DOF_ID_BYTES 4
| #define PROCESSOR_ID_BYTES 2
| #define SUBDOMAIN_ID_BYTES 2
| #define ENABLE_AMR 1
| #define ENABLE_VSMOOTHER 1
| #define ENABLE_PERIODIC 1
| #define ENABLE_DIRICHLET 1
| #define ENABLE_GHOSTED 1
| #define ENABLE_HIGHER_ORDER_SHAPES 1
| #define ENABLE_SECOND_DERIVATIVES 1
| #define HAVE_RPC_RPC_H 1
| #define HAVE_XDR 1
| #define USE_REAL_NUMBERS 1
| #define ENABLE_REFERENCE_COUNTING 1
| #define HAVE_BOOST /**/
| #define HAVE_MPI 1
| /* end confdefs.h. */
| #include <tbb/tbb_thread.h>
| int
| main ()
| {
|
| tbb::tbb_thread t;
| t.join();
|
| ;
| return 0;
| }
configure:29989: result: no
configure:30033: result: <<< Configuring library with Laspack support >>>
configure:30085: result: <<< Configuring library with SFC support >>>
configure:30135: checking zlib.h usability
configure:30135: mpicxx -c conftest.cpp >&5
configure:30135: $? = 0
configure:30135: result: yes
configure:30135: checking zlib.h presence
configure:30135: mpicxx -E conftest.cpp
configure:30135: $? = 0
configure:30135: result: yes
configure:30135: checking for zlib.h
configure:30135: result: yes
configure:30145: checking for gzopen in -lz
configure:30170: mpicxx -o conftest conftest.cpp -lz >&5
configure:30170: $? = 0
configure:30179: result: yes
configure:30198: result: <<< Configuring library with gzstreams support >>>
configure:30242: checking for bzip2
configure:30258: found /usr/bin/bzip2
configure:30270: result: bzip2
configure:30281: checking for bunzip2
configure:30297: found /usr/bin/bunzip2
configure:30309: result: bunzip2
configure:30318: result: <<< Using bzip2/bunzip2 for writing/reading compressed .bz2 files >>>
configure:30344: checking for xz
configure:30360: found /Users/guyer/.homebrew/bin/xz
configure:30372: result: xz
configure:30381: result: <<< Using xz for writing/reading compressed .xz files >>>
configure:30473: result: <<< Configuring library with Tecplot TecIO support >>>
configure:30734: result: <<< Configuring library with Metis support >>>
configure:30797: result: <<< Configuring library with Parmetis support >>>
configure:30830: checking for doxygen
configure:30848: found /Users/guyer/.homebrew/bin/doxygen
configure:30860: result: /Users/guyer/.homebrew/bin/doxygen
configure:30875: checking for dot
configure:30893: found /Users/guyer/bin/dot
configure:30905: result: /Users/guyer/bin/dot
configure:30950: result: <<< Configuring library with Tetgen support >>>
configure:31002: result: <<< Configuring library with Triangle support >>>
configure:31054: result: <<< Configuring library with GMV support >>>
configure:31166: checking /vtkConfigure.h usability
configure:31166: mpicxx -c conftest.cpp >&5
conftest.cpp:137:27: error: /vtkConfigure.h: No such file or directory
configure:31166: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "libmesh"
| #define PACKAGE_TARNAME "libmesh"
| #define PACKAGE_VERSION "0.9.1pre"
| #define PACKAGE_STRING "libmesh 0.9.1pre"
| #define PACKAGE_BUGREPORT "libmesh-users@lists.sourceforge.net"
| #define PACKAGE_URL "http://libmesh.sourceforge.net"
| #define CONFIGURE_INFO "./configure '--disable-tecplot' '--enable-tecio' '--with-netcdf=old' '--with-exodus=old' '--with-nemesis=old'"
| #define PACKAGE "libmesh"
| #define VERSION "0.9.1pre"
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_DLFCN_H 1
| #define LT_OBJDIR ".libs/"
| #define MAJOR_VERSION 0
| #define MINOR_VERSION 9
| #define MICRO_VERSION 1
| #define LIB_VERSION "0.9.1pre"
| #define LIB_RELEASE ""
| #define CXX "mpicxx"
| #define IO_COMPATIBILITY_VERSION "0.7.4"
| #define HAVE_NAMESPACES /**/
| #define DEFAULT_DOUBLE_PRECISION 1
| #define DEFAULT_SCALAR_TYPE double
| #define restrict __restrict
| #define HAVE_GETPWUID 1
| #define ENABLE_EXCEPTIONS 1
| #define SIZEOF_SHORT_INT 2
| #define SIZEOF_INT 4
| #define SIZEOF_UNSIGNED_INT 4
| #define SIZEOF_LONG_INT 8
| #define SIZEOF_FLOAT 4
| #define SIZEOF_DOUBLE 8
| #define SIZEOF_VOID_P 8
| #define SIZEOF_FUNCTION_POINTER 8
| #define HAVE_RTTI /**/
| #define HAVE_GETOPT_H 1
| #define HAVE_CSIGNAL 1
| #define HAVE_SYS_RESOURCE_H 1
| #define HAVE_LOCALE /**/
| #define HAVE_SSTREAM /**/
| #define HAVE_STRINGSTREAM /**/
| #define HAVE_FENV_H 1
| #define HAVE_XMMINTRIN_H 1
| #define HAVE_TR1_UNORDERED_MULTIMAP 1
| #define BEST_UNORDERED_MULTIMAP std::tr1::unordered_multimap
| #define INCLUDE_UNORDERED_MULTIMAP <tr1/unordered_map>
| #define DEFINE_HASH_STRING /**/
| #define DEFINE_HASH_POINTERS /**/
| #define HAVE_TR1_UNORDERED_MAP 1
| #define BEST_UNORDERED_MAP std::tr1::unordered_map
| #define INCLUDE_UNORDERED_MAP <tr1/unordered_map>
| #define DEFINE_HASH_STRING /**/
| #define DEFINE_HASH_POINTERS /**/
| #define HAVE_TR1_UNORDERED_SET 1
| #define BEST_UNORDERED_SET std::tr1::unordered_set
| #define INCLUDE_UNORDERED_SET <tr1/unordered_set>
| #define DEFINE_HASH_STRING /**/
| #define DEFINE_HASH_POINTERS /**/
| #define HAVE_DLFCN_H 1
| #define HAVE_GCC_ABI_DEMANGLE 1
| #define HAVE_GLIBC_BACKTRACE 1
| #define HAVE_OPENMP 1
| #define REQUIRE_SEPARATE_NAMESPACE 1
| #define BOUNDARY_ID_BYTES 2
| #define DOF_ID_BYTES 4
| #define PROCESSOR_ID_BYTES 2
| #define SUBDOMAIN_ID_BYTES 2
| #define ENABLE_AMR 1
| #define ENABLE_VSMOOTHER 1
| #define ENABLE_PERIODIC 1
| #define ENABLE_DIRICHLET 1
| #define ENABLE_GHOSTED 1
| #define ENABLE_HIGHER_ORDER_SHAPES 1
| #define ENABLE_SECOND_DERIVATIVES 1
| #define HAVE_RPC_RPC_H 1
| #define HAVE_XDR 1
| #define USE_REAL_NUMBERS 1
| #define ENABLE_REFERENCE_COUNTING 1
| #define HAVE_BOOST /**/
| #define HAVE_MPI 1
| #define HAVE_LASPACK 1
| #define HAVE_SFCURVES 1
| #define HAVE_ZLIB_H 1
| #define HAVE_GZSTREAM 1
| #define HAVE_BZIP 1
| #define HAVE_XZ 1
| #define HAVE_TECPLOT_API 1
| #define HAVE_TECPLOT_API_112 1
| #define HAVE_METIS 1
| #define HAVE_PARMETIS 1
| #define HAVE_TETGEN 1
| #define HAVE_TRIANGLE 1
| #define HAVE_GMV 1
| /* end confdefs.h. */
| #include <stdio.h>
| #ifdef HAVE_SYS_TYPES_H
| # include <sys/types.h>
| #endif
| #ifdef HAVE_SYS_STAT_H
| # include <sys/stat.h>
| #endif
| #ifdef STDC_HEADERS
| # include <stdlib.h>
| # include <stddef.h>
| #else
| # ifdef HAVE_STDLIB_H
| # include <stdlib.h>
| # endif
| #endif
| #ifdef HAVE_STRING_H
| # if !defined STDC_HEADERS && defined HAVE_MEMORY_H
| # include <memory.h>
| # endif
| # include <string.h>
| #endif
| #ifdef HAVE_STRINGS_H
| # include <strings.h>
| #endif
| #ifdef HAVE_INTTYPES_H
| # include <inttypes.h>
| #endif
| #ifdef HAVE_STDINT_H
| # include <stdint.h>
| #endif
| #ifdef HAVE_UNISTD_H
| # include <unistd.h>
| #endif
| #include </vtkConfigure.h>
configure:31166: result: no
configure:31166: checking /vtkConfigure.h presence
configure:31166: mpicxx -E conftest.cpp
conftest.cpp:104:27: error: /vtkConfigure.h: No such file or directory
configure:31166: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "libmesh"
| #define PACKAGE_TARNAME "libmesh"
| #define PACKAGE_VERSION "0.9.1pre"
| #define PACKAGE_STRING "libmesh 0.9.1pre"
| #define PACKAGE_BUGREPORT "libmesh-users@lists.sourceforge.net"
| #define PACKAGE_URL "http://libmesh.sourceforge.net"
| #define CONFIGURE_INFO "./configure '--disable-tecplot' '--enable-tecio' '--with-netcdf=old' '--with-exodus=old' '--with-nemesis=old'"
| #define PACKAGE "libmesh"
| #define VERSION "0.9.1pre"
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_DLFCN_H 1
| #define LT_OBJDIR ".libs/"
| #define MAJOR_VERSION 0
| #define MINOR_VERSION 9
| #define MICRO_VERSION 1
| #define LIB_VERSION "0.9.1pre"
| #define LIB_RELEASE ""
| #define CXX "mpicxx"
| #define IO_COMPATIBILITY_VERSION "0.7.4"
| #define HAVE_NAMESPACES /**/
| #define DEFAULT_DOUBLE_PRECISION 1
| #define DEFAULT_SCALAR_TYPE double
| #define restrict __restrict
| #define HAVE_GETPWUID 1
| #define ENABLE_EXCEPTIONS 1
| #define SIZEOF_SHORT_INT 2
| #define SIZEOF_INT 4
| #define SIZEOF_UNSIGNED_INT 4
| #define SIZEOF_LONG_INT 8
| #define SIZEOF_FLOAT 4
| #define SIZEOF_DOUBLE 8
| #define SIZEOF_VOID_P 8
| #define SIZEOF_FUNCTION_POINTER 8
| #define HAVE_RTTI /**/
| #define HAVE_GETOPT_H 1
| #define HAVE_CSIGNAL 1
| #define HAVE_SYS_RESOURCE_H 1
| #define HAVE_LOCALE /**/
| #define HAVE_SSTREAM /**/
| #define HAVE_STRINGSTREAM /**/
| #define HAVE_FENV_H 1
| #define HAVE_XMMINTRIN_H 1
| #define HAVE_TR1_UNORDERED_MULTIMAP 1
| #define BEST_UNORDERED_MULTIMAP std::tr1::unordered_multimap
| #define INCLUDE_UNORDERED_MULTIMAP <tr1/unordered_map>
| #define DEFINE_HASH_STRING /**/
| #define DEFINE_HASH_POINTERS /**/
| #define HAVE_TR1_UNORDERED_MAP 1
| #define BEST_UNORDERED_MAP std::tr1::unordered_map
| #define INCLUDE_UNORDERED_MAP <tr1/unordered_map>
| #define DEFINE_HASH_STRING /**/
| #define DEFINE_HASH_POINTERS /**/
| #define HAVE_TR1_UNORDERED_SET 1
| #define BEST_UNORDERED_SET std::tr1::unordered_set
| #define INCLUDE_UNORDERED_SET <tr1/unordered_set>
| #define DEFINE_HASH_STRING /**/
| #define DEFINE_HASH_POINTERS /**/
| #define HAVE_DLFCN_H 1
| #define HAVE_GCC_ABI_DEMANGLE 1
| #define HAVE_GLIBC_BACKTRACE 1
| #define HAVE_OPENMP 1
| #define REQUIRE_SEPARATE_NAMESPACE 1
| #define BOUNDARY_ID_BYTES 2
| #define DOF_ID_BYTES 4
| #define PROCESSOR_ID_BYTES 2
| #define SUBDOMAIN_ID_BYTES 2
| #define ENABLE_AMR 1
| #define ENABLE_VSMOOTHER 1
| #define ENABLE_PERIODIC 1
| #define ENABLE_DIRICHLET 1
| #define ENABLE_GHOSTED 1
| #define ENABLE_HIGHER_ORDER_SHAPES 1
| #define ENABLE_SECOND_DERIVATIVES 1
| #define HAVE_RPC_RPC_H 1
| #define HAVE_XDR 1
| #define USE_REAL_NUMBERS 1
| #define ENABLE_REFERENCE_COUNTING 1
| #define HAVE_BOOST /**/
| #define HAVE_MPI 1
| #define HAVE_LASPACK 1
| #define HAVE_SFCURVES 1
| #define HAVE_ZLIB_H 1
| #define HAVE_GZSTREAM 1
| #define HAVE_BZIP 1
| #define HAVE_XZ 1
| #define HAVE_TECPLOT_API 1
| #define HAVE_TECPLOT_API_112 1
| #define HAVE_METIS 1
| #define HAVE_PARMETIS 1
| #define HAVE_TETGEN 1
| #define HAVE_TRIANGLE 1
| #define HAVE_GMV 1
| /* end confdefs.h. */
| #include </vtkConfigure.h>
configure:31166: result: no
configure:31166: checking for /vtkConfigure.h
configure:31166: result: no
configure:31178: result: VTK header files not found!
configure:31440: checking /usr/include/Eigen/Eigen usability
configure:31440: mpicxx -c conftest.cpp >&5
conftest.cpp:137:36: error: /usr/include/Eigen/Eigen: No such file or directory
configure:31440: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "libmesh"
| #define PACKAGE_TARNAME "libmesh"
| #define PACKAGE_VERSION "0.9.1pre"
| #define PACKAGE_STRING "libmesh 0.9.1pre"
| #define PACKAGE_BUGREPORT "libmesh-users@lists.sourceforge.net"
| #define PACKAGE_URL "http://libmesh.sourceforge.net"
| #define CONFIGURE_INFO "./configure '--disable-tecplot' '--enable-tecio' '--with-netcdf=old' '--with-exodus=old' '--with-nemesis=old'"
| #define PACKAGE "libmesh"
| #define VERSION "0.9.1pre"
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_DLFCN_H 1
| #define LT_OBJDIR ".libs/"
| #define MAJOR_VERSION 0
| #define MINOR_VERSION 9
| #define MICRO_VERSION 1
| #define LIB_VERSION "0.9.1pre"
| #define LIB_RELEASE ""
| #define CXX "mpicxx"
| #define IO_COMPATIBILITY_VERSION "0.7.4"
| #define HAVE_NAMESPACES /**/
| #define DEFAULT_DOUBLE_PRECISION 1
| #define DEFAULT_SCALAR_TYPE double
| #define restrict __restrict
| #define HAVE_GETPWUID 1
| #define ENABLE_EXCEPTIONS 1
| #define SIZEOF_SHORT_INT 2
| #define SIZEOF_INT 4
| #define SIZEOF_UNSIGNED_INT 4
| #define SIZEOF_LONG_INT 8
| #define SIZEOF_FLOAT 4
| #define SIZEOF_DOUBLE 8
| #define SIZEOF_VOID_P 8
| #define SIZEOF_FUNCTION_POINTER 8
| #define HAVE_RTTI /**/
| #define HAVE_GETOPT_H 1
| #define HAVE_CSIGNAL 1
| #define HAVE_SYS_RESOURCE_H 1
| #define HAVE_LOCALE /**/
| #define HAVE_SSTREAM /**/
| #define HAVE_STRINGSTREAM /**/
| #define HAVE_FENV_H 1
| #define HAVE_XMMINTRIN_H 1
| #define HAVE_TR1_UNORDERED_MULTIMAP 1
| #define BEST_UNORDERED_MULTIMAP std::tr1::unordered_multimap
| #define INCLUDE_UNORDERED_MULTIMAP <tr1/unordered_map>
| #define DEFINE_HASH_STRING /**/
| #define DEFINE_HASH_POINTERS /**/
| #define HAVE_TR1_UNORDERED_MAP 1
| #define BEST_UNORDERED_MAP std::tr1::unordered_map
| #define INCLUDE_UNORDERED_MAP <tr1/unordered_map>
| #define DEFINE_HASH_STRING /**/
| #define DEFINE_HASH_POINTERS /**/
| #define HAVE_TR1_UNORDERED_SET 1
| #define BEST_UNORDERED_SET std::tr1::unordered_set
| #define INCLUDE_UNORDERED_SET <tr1/unordered_set>
| #define DEFINE_HASH_STRING /**/
| #define DEFINE_HASH_POINTERS /**/
| #define HAVE_DLFCN_H 1
| #define HAVE_GCC_ABI_DEMANGLE 1
| #define HAVE_GLIBC_BACKTRACE 1
| #define HAVE_OPENMP 1
| #define REQUIRE_SEPARATE_NAMESPACE 1
| #define BOUNDARY_ID_BYTES 2
| #define DOF_ID_BYTES 4
| #define PROCESSOR_ID_BYTES 2
| #define SUBDOMAIN_ID_BYTES 2
| #define ENABLE_AMR 1
| #define ENABLE_VSMOOTHER 1
| #define ENABLE_PERIODIC 1
| #define ENABLE_DIRICHLET 1
| #define ENABLE_GHOSTED 1
| #define ENABLE_HIGHER_ORDER_SHAPES 1
| #define ENABLE_SECOND_DERIVATIVES 1
| #define HAVE_RPC_RPC_H 1
| #define HAVE_XDR 1
| #define USE_REAL_NUMBERS 1
| #define ENABLE_REFERENCE_COUNTING 1
| #define HAVE_BOOST /**/
| #define HAVE_MPI 1
| #define HAVE_LASPACK 1
| #define HAVE_SFCURVES 1
| #define HAVE_ZLIB_H 1
| #define HAVE_GZSTREAM 1
| #define HAVE_BZIP 1
| #define HAVE_XZ 1
| #define HAVE_TECPLOT_API 1
| #define HAVE_TECPLOT_API_112 1
| #define HAVE_METIS 1
| #define HAVE_PARMETIS 1
| #define HAVE_TETGEN 1
| #define HAVE_TRIANGLE 1
| #define HAVE_GMV 1
| /* end confdefs.h. */
| #include <stdio.h>
| #ifdef HAVE_SYS_TYPES_H
| # include <sys/types.h>
| #endif
| #ifdef HAVE_SYS_STAT_H
| # include <sys/stat.h>
| #endif
| #ifdef STDC_HEADERS
| # include <stdlib.h>
| # include <stddef.h>
| #else
| # ifdef HAVE_STDLIB_H
| # include <stdlib.h>
| # endif
| #endif
| #ifdef HAVE_STRING_H
| # if !defined STDC_HEADERS && defined HAVE_MEMORY_H
| # include <memory.h>
| # endif
| # include <string.h>
| #endif
| #ifdef HAVE_STRINGS_H
| # include <strings.h>
| #endif
| #ifdef HAVE_INTTYPES_H
| # include <inttypes.h>
| #endif
| #ifdef HAVE_STDINT_H
| # include <stdint.h>
| #endif
| #ifdef HAVE_UNISTD_H
| # include <unistd.h>
| #endif
| #include </usr/include/Eigen/Eigen>
configure:31440: result: no
configure:31440: checking /usr/include/Eigen/Eigen presence
configure:31440: mpicxx -E conftest.cpp
conftest.cpp:104:36: error: /usr/include/Eigen/Eigen: No such file or directory
configure:31440: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "libmesh"
| #define PACKAGE_TARNAME "libmesh"
| #define PACKAGE_VERSION "0.9.1pre"
| #define PACKAGE_STRING "libmesh 0.9.1pre"
| #define PACKAGE_BUGREPORT "libmesh-users@lists.sourceforge.net"
| #define PACKAGE_URL "http://libmesh.sourceforge.net"
| #define CONFIGURE_INFO "./configure '--disable-tecplot' '--enable-tecio' '--with-netcdf=old' '--with-exodus=old' '--with-nemesis=old'"
| #define PACKAGE "libmesh"
| #define VERSION "0.9.1pre"
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_DLFCN_H 1
| #define LT_OBJDIR ".libs/"
| #define MAJOR_VERSION 0
| #define MINOR_VERSION 9
| #define MICRO_VERSION 1
| #define LIB_VERSION "0.9.1pre"
| #define LIB_RELEASE ""
| #define CXX "mpicxx"
| #define IO_COMPATIBILITY_VERSION "0.7.4"
| #define HAVE_NAMESPACES /**/
| #define DEFAULT_DOUBLE_PRECISION 1
| #define DEFAULT_SCALAR_TYPE double
| #define restrict __restrict
| #define HAVE_GETPWUID 1
| #define ENABLE_EXCEPTIONS 1
| #define SIZEOF_SHORT_INT 2
| #define SIZEOF_INT 4
| #define SIZEOF_UNSIGNED_INT 4
| #define SIZEOF_LONG_INT 8
| #define SIZEOF_FLOAT 4
| #define SIZEOF_DOUBLE 8
| #define SIZEOF_VOID_P 8
| #define SIZEOF_FUNCTION_POINTER 8
| #define HAVE_RTTI /**/
| #define HAVE_GETOPT_H 1
| #define HAVE_CSIGNAL 1
| #define HAVE_SYS_RESOURCE_H 1
| #define HAVE_LOCALE /**/
| #define HAVE_SSTREAM /**/
| #define HAVE_STRINGSTREAM /**/
| #define HAVE_FENV_H 1
| #define HAVE_XMMINTRIN_H 1
| #define HAVE_TR1_UNORDERED_MULTIMAP 1
| #define BEST_UNORDERED_MULTIMAP std::tr1::unordered_multimap
| #define INCLUDE_UNORDERED_MULTIMAP <tr1/unordered_map>
| #define DEFINE_HASH_STRING /**/
| #define DEFINE_HASH_POINTERS /**/
| #define HAVE_TR1_UNORDERED_MAP 1
| #define BEST_UNORDERED_MAP std::tr1::unordered_map
| #define INCLUDE_UNORDERED_MAP <tr1/unordered_map>
| #define DEFINE_HASH_STRING /**/
| #define DEFINE_HASH_POINTERS /**/
| #define HAVE_TR1_UNORDERED_SET 1
| #define BEST_UNORDERED_SET std::tr1::unordered_set
| #define INCLUDE_UNORDERED_SET <tr1/unordered_set>
| #define DEFINE_HASH_STRING /**/
| #define DEFINE_HASH_POINTERS /**/
| #define HAVE_DLFCN_H 1
| #define HAVE_GCC_ABI_DEMANGLE 1
| #define HAVE_GLIBC_BACKTRACE 1
| #define HAVE_OPENMP 1
| #define REQUIRE_SEPARATE_NAMESPACE 1
| #define BOUNDARY_ID_BYTES 2
| #define DOF_ID_BYTES 4
| #define PROCESSOR_ID_BYTES 2
| #define SUBDOMAIN_ID_BYTES 2
| #define ENABLE_AMR 1
| #define ENABLE_VSMOOTHER 1
| #define ENABLE_PERIODIC 1
| #define ENABLE_DIRICHLET 1
| #define ENABLE_GHOSTED 1
| #define ENABLE_HIGHER_ORDER_SHAPES 1
| #define ENABLE_SECOND_DERIVATIVES 1
| #define HAVE_RPC_RPC_H 1
| #define HAVE_XDR 1
| #define USE_REAL_NUMBERS 1
| #define ENABLE_REFERENCE_COUNTING 1
| #define HAVE_BOOST /**/
| #define HAVE_MPI 1
| #define HAVE_LASPACK 1
| #define HAVE_SFCURVES 1
| #define HAVE_ZLIB_H 1
| #define HAVE_GZSTREAM 1
| #define HAVE_BZIP 1
| #define HAVE_XZ 1
| #define HAVE_TECPLOT_API 1
| #define HAVE_TECPLOT_API_112 1
| #define HAVE_METIS 1
| #define HAVE_PARMETIS 1
| #define HAVE_TETGEN 1
| #define HAVE_TRIANGLE 1
| #define HAVE_GMV 1
| /* end confdefs.h. */
| #include </usr/include/Eigen/Eigen>
configure:31440: result: no
configure:31440: checking for /usr/include/Eigen/Eigen
configure:31440: result: no
configure:31452: result: Eigen header files not found!
configure:31572: checking /usr/include/glpk.h usability
configure:31572: mpicxx -c conftest.cpp >&5
conftest.cpp:137:31: error: /usr/include/glpk.h: No such file or directory
configure:31572: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "libmesh"
| #define PACKAGE_TARNAME "libmesh"
| #define PACKAGE_VERSION "0.9.1pre"
| #define PACKAGE_STRING "libmesh 0.9.1pre"
| #define PACKAGE_BUGREPORT "libmesh-users@lists.sourceforge.net"
| #define PACKAGE_URL "http://libmesh.sourceforge.net"
| #define CONFIGURE_INFO "./configure '--disable-tecplot' '--enable-tecio' '--with-netcdf=old' '--with-exodus=old' '--with-nemesis=old'"
| #define PACKAGE "libmesh"
| #define VERSION "0.9.1pre"
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_DLFCN_H 1
| #define LT_OBJDIR ".libs/"
| #define MAJOR_VERSION 0
| #define MINOR_VERSION 9
| #define MICRO_VERSION 1
| #define LIB_VERSION "0.9.1pre"
| #define LIB_RELEASE ""
| #define CXX "mpicxx"
| #define IO_COMPATIBILITY_VERSION "0.7.4"
| #define HAVE_NAMESPACES /**/
| #define DEFAULT_DOUBLE_PRECISION 1
| #define DEFAULT_SCALAR_TYPE double
| #define restrict __restrict
| #define HAVE_GETPWUID 1
| #define ENABLE_EXCEPTIONS 1
| #define SIZEOF_SHORT_INT 2
| #define SIZEOF_INT 4
| #define SIZEOF_UNSIGNED_INT 4
| #define SIZEOF_LONG_INT 8
| #define SIZEOF_FLOAT 4
| #define SIZEOF_DOUBLE 8
| #define SIZEOF_VOID_P 8
| #define SIZEOF_FUNCTION_POINTER 8
| #define HAVE_RTTI /**/
| #define HAVE_GETOPT_H 1
| #define HAVE_CSIGNAL 1
| #define HAVE_SYS_RESOURCE_H 1
| #define HAVE_LOCALE /**/
| #define HAVE_SSTREAM /**/
| #define HAVE_STRINGSTREAM /**/
| #define HAVE_FENV_H 1
| #define HAVE_XMMINTRIN_H 1
| #define HAVE_TR1_UNORDERED_MULTIMAP 1
| #define BEST_UNORDERED_MULTIMAP std::tr1::unordered_multimap
| #define INCLUDE_UNORDERED_MULTIMAP <tr1/unordered_map>
| #define DEFINE_HASH_STRING /**/
| #define DEFINE_HASH_POINTERS /**/
| #define HAVE_TR1_UNORDERED_MAP 1
| #define BEST_UNORDERED_MAP std::tr1::unordered_map
| #define INCLUDE_UNORDERED_MAP <tr1/unordered_map>
| #define DEFINE_HASH_STRING /**/
| #define DEFINE_HASH_POINTERS /**/
| #define HAVE_TR1_UNORDERED_SET 1
| #define BEST_UNORDERED_SET std::tr1::unordered_set
| #define INCLUDE_UNORDERED_SET <tr1/unordered_set>
| #define DEFINE_HASH_STRING /**/
| #define DEFINE_HASH_POINTERS /**/
| #define HAVE_DLFCN_H 1
| #define HAVE_GCC_ABI_DEMANGLE 1
| #define HAVE_GLIBC_BACKTRACE 1
| #define HAVE_OPENMP 1
| #define REQUIRE_SEPARATE_NAMESPACE 1
| #define BOUNDARY_ID_BYTES 2
| #define DOF_ID_BYTES 4
| #define PROCESSOR_ID_BYTES 2
| #define SUBDOMAIN_ID_BYTES 2
| #define ENABLE_AMR 1
| #define ENABLE_VSMOOTHER 1
| #define ENABLE_PERIODIC 1
| #define ENABLE_DIRICHLET 1
| #define ENABLE_GHOSTED 1
| #define ENABLE_HIGHER_ORDER_SHAPES 1
| #define ENABLE_SECOND_DERIVATIVES 1
| #define HAVE_RPC_RPC_H 1
| #define HAVE_XDR 1
| #define USE_REAL_NUMBERS 1
| #define ENABLE_REFERENCE_COUNTING 1
| #define HAVE_BOOST /**/
| #define HAVE_MPI 1
| #define HAVE_LASPACK 1
| #define HAVE_SFCURVES 1
| #define HAVE_ZLIB_H 1
| #define HAVE_GZSTREAM 1
| #define HAVE_BZIP 1
| #define HAVE_XZ 1
| #define HAVE_TECPLOT_API 1
| #define HAVE_TECPLOT_API_112 1
| #define HAVE_METIS 1
| #define HAVE_PARMETIS 1
| #define HAVE_TETGEN 1
| #define HAVE_TRIANGLE 1
| #define HAVE_GMV 1
| /* end confdefs.h. */
| #include <stdio.h>
| #ifdef HAVE_SYS_TYPES_H
| # include <sys/types.h>
| #endif
| #ifdef HAVE_SYS_STAT_H
| # include <sys/stat.h>
| #endif
| #ifdef STDC_HEADERS
| # include <stdlib.h>
| # include <stddef.h>
| #else
| # ifdef HAVE_STDLIB_H
| # include <stdlib.h>
| # endif
| #endif
| #ifdef HAVE_STRING_H
| # if !defined STDC_HEADERS && defined HAVE_MEMORY_H
| # include <memory.h>
| # endif
| # include <string.h>
| #endif
| #ifdef HAVE_STRINGS_H
| # include <strings.h>
| #endif
| #ifdef HAVE_INTTYPES_H
| # include <inttypes.h>
| #endif
| #ifdef HAVE_STDINT_H
| # include <stdint.h>
| #endif
| #ifdef HAVE_UNISTD_H
| # include <unistd.h>
| #endif
| #include </usr/include/glpk.h>
configure:31572: result: no
configure:31572: checking /usr/include/glpk.h presence
configure:31572: mpicxx -E conftest.cpp
conftest.cpp:104:31: error: /usr/include/glpk.h: No such file or directory
configure:31572: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "libmesh"
| #define PACKAGE_TARNAME "libmesh"
| #define PACKAGE_VERSION "0.9.1pre"
| #define PACKAGE_STRING "libmesh 0.9.1pre"
| #define PACKAGE_BUGREPORT "libmesh-users@lists.sourceforge.net"
| #define PACKAGE_URL "http://libmesh.sourceforge.net"
| #define CONFIGURE_INFO "./configure '--disable-tecplot' '--enable-tecio' '--with-netcdf=old' '--with-exodus=old' '--with-nemesis=old'"
| #define PACKAGE "libmesh"
| #define VERSION "0.9.1pre"
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_DLFCN_H 1
| #define LT_OBJDIR ".libs/"
| #define MAJOR_VERSION 0
| #define MINOR_VERSION 9
| #define MICRO_VERSION 1
| #define LIB_VERSION "0.9.1pre"
| #define LIB_RELEASE ""
| #define CXX "mpicxx"
| #define IO_COMPATIBILITY_VERSION "0.7.4"
| #define HAVE_NAMESPACES /**/
| #define DEFAULT_DOUBLE_PRECISION 1
| #define DEFAULT_SCALAR_TYPE double
| #define restrict __restrict
| #define HAVE_GETPWUID 1
| #define ENABLE_EXCEPTIONS 1
| #define SIZEOF_SHORT_INT 2
| #define SIZEOF_INT 4
| #define SIZEOF_UNSIGNED_INT 4
| #define SIZEOF_LONG_INT 8
| #define SIZEOF_FLOAT 4
| #define SIZEOF_DOUBLE 8
| #define SIZEOF_VOID_P 8
| #define SIZEOF_FUNCTION_POINTER 8
| #define HAVE_RTTI /**/
| #define HAVE_GETOPT_H 1
| #define HAVE_CSIGNAL 1
| #define HAVE_SYS_RESOURCE_H 1
| #define HAVE_LOCALE /**/
| #define HAVE_SSTREAM /**/
| #define HAVE_STRINGSTREAM /**/
| #define HAVE_FENV_H 1
| #define HAVE_XMMINTRIN_H 1
| #define HAVE_TR1_UNORDERED_MULTIMAP 1
| #define BEST_UNORDERED_MULTIMAP std::tr1::unordered_multimap
| #define INCLUDE_UNORDERED_MULTIMAP <tr1/unordered_map>
| #define DEFINE_HASH_STRING /**/
| #define DEFINE_HASH_POINTERS /**/
| #define HAVE_TR1_UNORDERED_MAP 1
| #define BEST_UNORDERED_MAP std::tr1::unordered_map
| #define INCLUDE_UNORDERED_MAP <tr1/unordered_map>
| #define DEFINE_HASH_STRING /**/
| #define DEFINE_HASH_POINTERS /**/
| #define HAVE_TR1_UNORDERED_SET 1
| #define BEST_UNORDERED_SET std::tr1::unordered_set
| #define INCLUDE_UNORDERED_SET <tr1/unordered_set>
| #define DEFINE_HASH_STRING /**/
| #define DEFINE_HASH_POINTERS /**/
| #define HAVE_DLFCN_H 1
| #define HAVE_GCC_ABI_DEMANGLE 1
| #define HAVE_GLIBC_BACKTRACE 1
| #define HAVE_OPENMP 1
| #define REQUIRE_SEPARATE_NAMESPACE 1
| #define BOUNDARY_ID_BYTES 2
| #define DOF_ID_BYTES 4
| #define PROCESSOR_ID_BYTES 2
| #define SUBDOMAIN_ID_BYTES 2
| #define ENABLE_AMR 1
| #define ENABLE_VSMOOTHER 1
| #define ENABLE_PERIODIC 1
| #define ENABLE_DIRICHLET 1
| #define ENABLE_GHOSTED 1
| #define ENABLE_HIGHER_ORDER_SHAPES 1
| #define ENABLE_SECOND_DERIVATIVES 1
| #define HAVE_RPC_RPC_H 1
| #define HAVE_XDR 1
| #define USE_REAL_NUMBERS 1
| #define ENABLE_REFERENCE_COUNTING 1
| #define HAVE_BOOST /**/
| #define HAVE_MPI 1
| #define HAVE_LASPACK 1
| #define HAVE_SFCURVES 1
| #define HAVE_ZLIB_H 1
| #define HAVE_GZSTREAM 1
| #define HAVE_BZIP 1
| #define HAVE_XZ 1
| #define HAVE_TECPLOT_API 1
| #define HAVE_TECPLOT_API_112 1
| #define HAVE_METIS 1
| #define HAVE_PARMETIS 1
| #define HAVE_TETGEN 1
| #define HAVE_TRIANGLE 1
| #define HAVE_GMV 1
| /* end confdefs.h. */
| #include </usr/include/glpk.h>
configure:31572: result: no
configure:31572: checking for /usr/include/glpk.h
configure:31572: result: no
configure:31584: result: GLPK header files not found!
configure:32041: result: <<< Configuring library with NetCDF version 4 support >>>
configure:32134: result: <<< Configuring library with Exodus version v5.22 support >>>
configure:32220: result: <<< Configuring library with Nemesis version v5.22 support >>>
configure:32294: result: <<< Configuring library with libHilbert support >>>
configure:32373: result: >>> Disabling fparser optimization on darwin10.8.0 <<<
configure:32383: checking for a sed that does not truncate output
configure:32447: result: /usr/bin/sed
configure:32456: checking for bison
configure:32472: found /usr/bin/bison
configure:32483: result: bison -y
configure:32512: result: <<< Configuring library with fparser support (release version) >>>
configure:32626: checking for cppunit-config
configure:32657: result: no
configure:32667: checking for Cppunit - version >= 1.10.0
configure:32671: result: no
configure:32771: result: <<< Configuring library with nanoflann KDtree support >>>
configure:32798: result: ----------------------------------------------
configure:32800: result: --- Done configuring for optional packages ---
configure:32802: result: ----------------------------------------------
configure:32813: result: removing duplicate include paths...
configure:32818: result: removing duplicate libraries...
configure:32844: checking for git
configure:32862: found /usr/local/git/bin/git
configure:32874: result: /usr/local/git/bin/git
configure:33078: checking that generated files are newer than configure
configure:33084: result: done
configure:33303: creating ./config.status
## ---------------------- ##
## Running config.status. ##
## ---------------------- ##
This file was extended by libmesh config.status 0.9.1pre, which was
generated by GNU Autoconf 2.69. Invocation command line was
CONFIG_FILES =
CONFIG_HEADERS =
CONFIG_LINKS =
CONFIG_COMMANDS =
$ ./config.status
on some.host.name
config.status:1683: creating Makefile
config.status:1683: creating include/Makefile
config.status:1683: creating include/libmesh/Makefile
config.status:1683: creating contrib/Makefile
config.status:1683: creating contrib/utils/Makefile
config.status:1683: creating contrib/utils/Make.common
config.status:1683: creating tests/Makefile
config.status:1683: creating doc/Doxyfile
config.status:1683: creating contrib/utils/libmesh.pc
config.status:1683: creating contrib/utils/libmesh-opt.pc
config.status:1683: creating contrib/utils/libmesh-dbg.pc
config.status:1683: creating contrib/utils/libmesh-devel.pc
config.status:1683: creating contrib/utils/libmesh-prof.pc
config.status:1683: creating contrib/utils/libmesh-oprof.pc
config.status:1683: creating contrib/bin/libmesh-config
config.status:1683: creating contrib/bin/xda2mgf
config.status:1683: creating contrib/bin/create_libmesh_release
config.status:1683: creating doc/dot
config.status:1683: creating contrib/boost/include/Makefile
config.status:1683: creating contrib/laspack/Makefile
config.status:1683: creating contrib/sfcurves/Makefile
config.status:1683: creating contrib/gzstream/Makefile
config.status:1683: creating contrib/tecplot/tecio/Makefile
config.status:1683: creating contrib/metis/Makefile
config.status:1683: creating contrib/parmetis/Makefile
config.status:1683: creating contrib/tetgen/Makefile
config.status:1683: creating contrib/triangle/Makefile
config.status:1683: creating contrib/gmv/Makefile
config.status:1683: creating contrib/netcdf/v3/Makefile
config.status:1683: creating contrib/exodusii/v5.09/Makefile
config.status:1683: creating contrib/exodusii/v5.22/exodus/cbind/Makefile
config.status:1683: creating contrib/nemesis/v3.09/Makefile
config.status:1683: creating contrib/nemesis/v5.22/nemesis/Makefile
config.status:1683: creating contrib/libHilbert/Makefile
config.status:1683: creating contrib/fparser/Makefile
config.status:1683: creating contrib/fparser/extrasrc/Makefile
config.status:1683: creating contrib/nanoflann/Makefile
config.status:1683: creating examples/introduction/introduction_ex1/Makefile
config.status:1683: creating examples/introduction/introduction_ex2/Makefile
config.status:1683: creating examples/introduction/introduction_ex3/Makefile
config.status:1683: creating examples/introduction/introduction_ex4/Makefile
config.status:1683: creating examples/introduction/introduction_ex5/Makefile
config.status:1683: creating examples/adaptivity/adaptivity_ex1/Makefile
config.status:1683: creating examples/adaptivity/adaptivity_ex2/Makefile
config.status:1683: creating examples/adaptivity/adaptivity_ex3/Makefile
config.status:1683: creating examples/adaptivity/adaptivity_ex4/Makefile
config.status:1683: creating examples/adaptivity/adaptivity_ex5/Makefile
config.status:1683: creating examples/adjoints/adjoints_ex1/Makefile
config.status:1683: creating examples/adjoints/adjoints_ex2/Makefile
config.status:1683: creating examples/adjoints/adjoints_ex3/Makefile
config.status:1683: creating examples/adjoints/adjoints_ex4/Makefile
config.status:1683: creating examples/adjoints/adjoints_ex5/Makefile
config.status:1683: creating examples/eigenproblems/eigenproblems_ex1/Makefile
config.status:1683: creating examples/eigenproblems/eigenproblems_ex2/Makefile
config.status:1683: creating examples/eigenproblems/eigenproblems_ex3/Makefile
config.status:1683: creating examples/fem_system/fem_system_ex1/Makefile
config.status:1683: creating examples/fem_system/fem_system_ex2/Makefile
config.status:1683: creating examples/solution_transfer/solution_transfer_ex1/Makefile
config.status:1683: creating examples/miscellaneous/miscellaneous_ex1/Makefile
config.status:1683: creating examples/miscellaneous/miscellaneous_ex2/Makefile
config.status:1683: creating examples/miscellaneous/miscellaneous_ex3/Makefile
config.status:1683: creating examples/miscellaneous/miscellaneous_ex4/Makefile
config.status:1683: creating examples/miscellaneous/miscellaneous_ex5/Makefile
config.status:1683: creating examples/miscellaneous/miscellaneous_ex6/Makefile
config.status:1683: creating examples/miscellaneous/miscellaneous_ex7/Makefile
config.status:1683: creating examples/miscellaneous/miscellaneous_ex8/Makefile
config.status:1683: creating examples/subdomains/subdomains_ex1/Makefile
config.status:1683: creating examples/subdomains/subdomains_ex2/Makefile
config.status:1683: creating examples/systems_of_equations/systems_of_equations_ex1/Makefile
config.status:1683: creating examples/systems_of_equations/systems_of_equations_ex2/Makefile
config.status:1683: creating examples/systems_of_equations/systems_of_equations_ex3/Makefile
config.status:1683: creating examples/systems_of_equations/systems_of_equations_ex4/Makefile
config.status:1683: creating examples/systems_of_equations/systems_of_equations_ex5/Makefile
config.status:1683: creating examples/systems_of_equations/systems_of_equations_ex6/Makefile
config.status:1683: creating examples/reduced_basis/reduced_basis_ex1/Makefile
config.status:1683: creating examples/reduced_basis/reduced_basis_ex2/Makefile
config.status:1683: creating examples/reduced_basis/reduced_basis_ex3/Makefile
config.status:1683: creating examples/reduced_basis/reduced_basis_ex4/Makefile
config.status:1683: creating examples/reduced_basis/reduced_basis_ex5/Makefile
config.status:1683: creating examples/reduced_basis/reduced_basis_ex6/Makefile
config.status:1683: creating examples/reduced_basis/reduced_basis_ex7/Makefile
config.status:1683: creating examples/transient/transient_ex1/Makefile
config.status:1683: creating examples/transient/transient_ex2/Makefile
config.status:1683: creating examples/vector_fe/vector_fe_ex1/Makefile
config.status:1683: creating examples/vector_fe/vector_fe_ex2/Makefile
config.status:1683: creating examples/vector_fe/vector_fe_ex3/Makefile
config.status:1683: creating examples/Makefile
config.status:1683: creating include/libmesh_config.h.tmp
config.status:1912: executing include/libmesh_config.h commands
config.status:1954: creating include/libmesh_config.h - prefix LIBMESH for include/libmesh_config.h.tmp defines
config.status:1912: executing depfiles commands
config.status:1912: executing libtool commands
configure:36519: === configuring in contrib/netcdf/v4 (/Users/guyer/Documents/research/libmesh/contrib/netcdf/v4)
configure:36582: running /bin/sh ./configure --disable-option-checking '--prefix=/usr/local' '--disable-tecplot' '--enable-tecio' '--with-netcdf=old' '--with-exodus=old' '--with-nemesis=old' '--disable-netcdf-4' '--disable-testsets' 'CXX=mpicxx' 'CC=mpicc' 'F77=mpif77' 'FC=mpif90' 'CPPFLAGS=-I./contrib/boost/include ' 'LIBS=-lz ' --cache-file=/dev/null --srcdir=.
configure:36773: result: ---------------------------------------------
configure:36775: result: --------- Done Configuring libMesh ----------
configure:36777: result: ---------------------------------------------
## ---------------- ##
## Cache variables. ##
## ---------------- ##
ac_cv_build=x86_64-apple-darwin10.8.0
ac_cv_c_compiler_gnu=yes
ac_cv_c_restrict=__restrict
ac_cv_cxx_compiler_gnu=yes
ac_cv_cxx_gcc_abi_demangle=yes
ac_cv_cxx_glibc_backtrace=yes
ac_cv_cxx_have_locale=yes
ac_cv_cxx_have_sstream=yes
ac_cv_cxx_namespaces=yes
ac_cv_cxx_rtti=yes
ac_cv_cxx_thread=no
ac_cv_cxx_tr1_unordered_map=yes
ac_cv_cxx_tr1_unordered_multimap=yes
ac_cv_cxx_tr1_unordered_set=yes
ac_cv_cxx_unordered_map=no
ac_cv_cxx_unordered_multimap=no
ac_cv_cxx_unordered_set=no
ac_cv_env_CCC_set=
ac_cv_env_CCC_value=
ac_cv_env_CC_set=
ac_cv_env_CC_value=
ac_cv_env_CFLAGS_set=
ac_cv_env_CFLAGS_value=
ac_cv_env_CPPFLAGS_set=
ac_cv_env_CPPFLAGS_value=
ac_cv_env_CPP_set=
ac_cv_env_CPP_value=
ac_cv_env_CXXCPP_set=
ac_cv_env_CXXCPP_value=
ac_cv_env_CXXFLAGS_set=
ac_cv_env_CXXFLAGS_value=
ac_cv_env_CXX_set=
ac_cv_env_CXX_value=
ac_cv_env_F77_set=
ac_cv_env_F77_value=
ac_cv_env_FCFLAGS_set=
ac_cv_env_FCFLAGS_value=
ac_cv_env_FC_set=
ac_cv_env_FC_value=
ac_cv_env_FFLAGS_set=
ac_cv_env_FFLAGS_value=
ac_cv_env_HDF5_DIR_set=
ac_cv_env_HDF5_DIR_value=
ac_cv_env_LDFLAGS_set=
ac_cv_env_LDFLAGS_value=
ac_cv_env_LIBS_set=
ac_cv_env_LIBS_value=
ac_cv_env_METHODS_set=
ac_cv_env_METHODS_value=
ac_cv_env_PETSC_ARCH_set=
ac_cv_env_PETSC_ARCH_value=
ac_cv_env_PETSC_DIR_set=
ac_cv_env_PETSC_DIR_value=
ac_cv_env_SLEPC_DIR_set=
ac_cv_env_SLEPC_DIR_value=
ac_cv_env_TRILINOS_DIR_set=
ac_cv_env_TRILINOS_DIR_value=
ac_cv_env_VTK_DIR_set=
ac_cv_env_VTK_DIR_value=
ac_cv_env_VTK_INCLUDE_set=
ac_cv_env_VTK_INCLUDE_value=
ac_cv_env_YACC_set=
ac_cv_env_YACC_value=
ac_cv_env_YFLAGS_set=
ac_cv_env_YFLAGS_value=
ac_cv_env_build_alias_set=
ac_cv_env_build_alias_value=
ac_cv_env_host_alias_set=
ac_cv_env_host_alias_value=
ac_cv_env_libmesh_CFLAGS_set=
ac_cv_env_libmesh_CFLAGS_value=
ac_cv_env_libmesh_CPPFLAGS_set=
ac_cv_env_libmesh_CPPFLAGS_value=
ac_cv_env_libmesh_CXXFLAGS_set=
ac_cv_env_libmesh_CXXFLAGS_value=
ac_cv_env_target_alias_set=
ac_cv_env_target_alias_value=
ac_cv_f77_compiler_gnu=no
ac_cv_fc_compiler_gnu=no
ac_cv_file_src_base_libmesh_C=yes
ac_cv_func_xdrstdio_create=yes
ac_cv_have_fedisableexcept=no
ac_cv_have_feenableexcept=no
ac_cv_header__include_petscversion_h=no
ac_cv_header__usr_include_Eigen_Eigen=no
ac_cv_header__usr_include_glpk_h=no
ac_cv_header__usr_include_tbb_task_scheduler_init_h=no
ac_cv_header__vtkConfigure_h=no
ac_cv_header_csignal=yes
ac_cv_header_dlfcn_h=yes
ac_cv_header_fenv_h=yes
ac_cv_header_getopt_h=yes
ac_cv_header_inttypes_h=yes
ac_cv_header_memory_h=yes
ac_cv_header_rpc_rpc_h=yes
ac_cv_header_stdc=yes
ac_cv_header_stdint_h=yes
ac_cv_header_stdlib_h=yes
ac_cv_header_string_h=yes
ac_cv_header_strings_h=yes
ac_cv_header_sys_resource_h=yes
ac_cv_header_sys_stat_h=yes
ac_cv_header_sys_types_h=yes
ac_cv_header_unistd_h=yes
ac_cv_header_xmmintrin_h=yes
ac_cv_header_zlib_h=yes
ac_cv_host=x86_64-apple-darwin10.8.0
ac_cv_lib_z_gzopen=yes
ac_cv_objext=o
ac_cv_path_CPPUNIT_CONFIG=no
ac_cv_path_DOT=/Users/guyer/bin/dot
ac_cv_path_DOXYGEN=/Users/guyer/.homebrew/bin/doxygen
ac_cv_path_EGREP='/usr/bin/grep -E'
ac_cv_path_FGREP='/usr/bin/grep -F'
ac_cv_path_GREP=/usr/bin/grep
ac_cv_path_PERL=/usr/bin/perl
ac_cv_path_PKG_CONFIG=/Users/guyer/.homebrew/bin/pkg-config
ac_cv_path_SED=/usr/bin/sed
ac_cv_path_gitquery=/usr/local/git/bin/git
ac_cv_path_install='/usr/bin/install -c'
ac_cv_prog_AWK=awk
ac_cv_prog_BUNZIP2=bunzip2
ac_cv_prog_BZIP2=bzip2
ac_cv_prog_CPP='mpicc -E'
ac_cv_prog_CXXCPP='mpicxx -E'
ac_cv_prog_XZ=xz
ac_cv_prog_YACC='bison -y'
ac_cv_prog_ac_ct_AR=ar
ac_cv_prog_ac_ct_CC=mpicc
ac_cv_prog_ac_ct_CXX=mpicxx
ac_cv_prog_ac_ct_DSYMUTIL=dsymutil
ac_cv_prog_ac_ct_F77=mpif77
ac_cv_prog_ac_ct_FC=mpif90
ac_cv_prog_ac_ct_LIPO=lipo
ac_cv_prog_ac_ct_NMEDIT=nmedit
ac_cv_prog_ac_ct_OTOOL=otool
ac_cv_prog_ac_ct_RANLIB=ranlib
ac_cv_prog_ac_ct_STRIP=strip
ac_cv_prog_cc_c89=
ac_cv_prog_cc_g=yes
ac_cv_prog_cxx_g=yes
ac_cv_prog_f77_g=no
ac_cv_prog_fc_g=no
ac_cv_prog_make_make_set=yes
ac_cv_sizeof_double=8
ac_cv_sizeof_float=4
ac_cv_sizeof_function_pointer=8
ac_cv_sizeof_int=4
ac_cv_sizeof_long_int=8
ac_cv_sizeof_short_int=2
ac_cv_sizeof_unsigned_int=4
ac_cv_sizeof_void_p=8
ac_cv_target=x86_64-apple-darwin10.8.0
ac_cv_tbb_cxx_thread=no
am_cv_CC_dependencies_compiler_type=gcc3
am_cv_CXX_dependencies_compiler_type=gcc3
am_cv_make_support_nested_variables=yes
am_cv_prog_tar_ustar=gnutar
ax_cv_cxx_openmp=-fopenmp
lt_cv_apple_cc_single_mod=yes
lt_cv_ar_at_file=no
lt_cv_deplibs_check_method=pass_all
lt_cv_file_magic_cmd='$MAGIC_CMD'
lt_cv_file_magic_test_file=
lt_cv_ld_exported_symbols_list=yes
lt_cv_ld_force_load=yes
lt_cv_ld_reload_flag=-r
lt_cv_nm_interface='BSD nm'
lt_cv_objdir=.libs
lt_cv_path_LD=/usr/libexec/gcc/i686-apple-darwin10/4.2.1/ld
lt_cv_path_LDCXX=/usr/libexec/gcc/i686-apple-darwin10/4.2.1/ld
lt_cv_path_NM=/usr/bin/nm
lt_cv_path_mainfest_tool=no
lt_cv_prog_compiler_c_o=yes
lt_cv_prog_compiler_c_o_CXX=yes
lt_cv_prog_compiler_c_o_F77=no
lt_cv_prog_compiler_c_o_FC=no
lt_cv_prog_compiler_pic='-fno-common -DPIC'
lt_cv_prog_compiler_pic_CXX='-fno-common -DPIC'
lt_cv_prog_compiler_pic_F77=
lt_cv_prog_compiler_pic_FC=
lt_cv_prog_compiler_pic_works=yes
lt_cv_prog_compiler_pic_works_CXX=yes
lt_cv_prog_compiler_rtti_exceptions=no
lt_cv_prog_compiler_static_works=no
lt_cv_prog_compiler_static_works_CXX=no
lt_cv_prog_compiler_static_works_F77=no
lt_cv_prog_compiler_static_works_FC=no
lt_cv_prog_gnu_ld=no
lt_cv_prog_gnu_ldcxx=no
lt_cv_sharedlib_from_linklib_cmd='printf %s\n'
lt_cv_sys_global_symbol_pipe='sed -n -e '\''s/^.*[ ]\([BCDEGRST][BCDEGRST]*\)[ ][ ]*_\([_A-Za-z][_A-Za-z0-9]*\)$/\1 _\2 \2/p'\'' | sed '\''/ __gnu_lto/d'\'''
lt_cv_sys_global_symbol_to_c_name_address='sed -n -e '\''s/^: \([^ ]*\)[ ]*$/ {\"\1\", (void *) 0},/p'\'' -e '\''s/^[BCDEGRST]* \([^ ]*\) \([^ ]*\)$/ {"\2", (void *) \&\2},/p'\'''
lt_cv_sys_global_symbol_to_c_name_address_lib_prefix='sed -n -e '\''s/^: \([^ ]*\)[ ]*$/ {\"\1\", (void *) 0},/p'\'' -e '\''s/^[BCDEGRST]* \([^ ]*\) \(lib[^ ]*\)$/ {"\2", (void *) \&\2},/p'\'' -e '\''s/^[BCDEGRST]* \([^ ]*\) \([^ ]*\)$/ {"lib\2", (void *) \&\2},/p'\'''
lt_cv_sys_global_symbol_to_cdecl='sed -n -e '\''s/^T .* \(.*\)$/extern int \1();/p'\'' -e '\''s/^[BCDEGRST]* .* \(.*\)$/extern char \1;/p'\'''
lt_cv_sys_max_cmd_len=196608
lt_cv_to_host_file_cmd=func_convert_file_noop
lt_cv_to_tool_file_cmd=func_convert_file_noop
## ----------------- ##
## Output variables. ##
## ----------------- ##
ACLOCAL='${SHELL} /Users/guyer/Documents/research/libmesh/build-aux/missing --run aclocal-1.12'
AMDEPBACKSLASH='\'
AMDEP_FALSE='#'
AMDEP_TRUE=''
AMTAR='$${TAR-tar}'
AM_BACKSLASH='\'
AM_DEFAULT_V='$(AM_DEFAULT_VERBOSITY)'
AM_DEFAULT_VERBOSITY='0'
AM_V='$(V)'
AR='ar'
AUTOCONF='${SHELL} /Users/guyer/Documents/research/libmesh/build-aux/missing --run autoconf'
AUTOHEADER='${SHELL} /Users/guyer/Documents/research/libmesh/build-aux/missing --run autoheader'
AUTOMAKE='${SHELL} /Users/guyer/Documents/research/libmesh/build-aux/missing --run automake-1.12'
AWK='awk'
AZTECOO_INCLUDES=''
AZTECOO_LIBS=''
AZTECOO_MAKEFILE_EXPORT=''
BOOST_CPPFLAGS='-I./contrib/boost/include'
BOOST_LDFLAGS='-L/lib64'
BUILD_ARCH='x86_64-apple-darwin10.8.0'
BUILD_DEVSTATUS='Development Build'
BUILD_HOST='some.host.name'
BUILD_METIS_FALSE='#'
BUILD_METIS_TRUE=''
BUILD_USER='guyer'
BUILD_VERSION='fef96121da67e9fe126c586c8e63a0e1dbc19003'
BUNZIP2='bunzip2'
BZIP2='bzip2'
CC='mpicc'
CCDEPMODE='depmode=gcc3'
CFLAGS=''
CFLAGS_DBG='-g -Wimplicit -fopenmp'
CFLAGS_DEVEL='-O2 -g -Wimplicit -funroll-loops -fstrict-aliasing -fopenmp'
CFLAGS_DVL=''
CFLAGS_OPROF='-O2 -funroll-loops -fstrict-aliasing -g -fno-omit-frame-pointer -fopenmp'
CFLAGS_OPT='-O2 -funroll-loops -fstrict-aliasing -fopenmp'
CFLAGS_PROF='-O2 -funroll-loops -fstrict-aliasing -pg -fopenmp'
CODE_COVERAGE_ENABLED_FALSE=''
CODE_COVERAGE_ENABLED_TRUE='#'
CPP='mpicc -E'
CPPFLAGS=''
CPPFLAGS_DBG='-DDEBUG '
CPPFLAGS_DEVEL=' '
CPPFLAGS_OPROF='-DNDEBUG '
CPPFLAGS_OPT='-DNDEBUG '
CPPFLAGS_PROF='-DNDEBUG '
CPPUNIT_CFLAGS=''
CPPUNIT_CONFIG='no'
CPPUNIT_LIBS=''
CXX='mpicxx'
CXXCPP='mpicxx -E'
CXXDEPMODE='depmode=gcc3'
CXXFLAGS=''
CXXFLAGS_DBG=' -O0 -felide-constructors -g -ansi -pedantic -W -Wall -Wextra -Wno-long-long -Wunused -Wpointer-arith -Wformat -Wparentheses -Woverloaded-virtual -fopenmp'
CXXFLAGS_DEVEL=' -O2 -felide-constructors -g -ansi -pedantic -W -Wall -Wextra -Wno-long-long -Wunused -Wpointer-arith -Wformat -Wparentheses -Wuninitialized -funroll-loops -fstrict-aliasing -Woverloaded-virtual -Wdisabled-optimization -fopenmp'
CXXFLAGS_DVL=''
CXXFLAGS_OPROF=' -O2 -felide-constructors -funroll-loops -fstrict-aliasing -Wdisabled-optimization -g -fno-omit-frame-pointer -fopenmp'
CXXFLAGS_OPT=' -O2 -felide-constructors -funroll-loops -fstrict-aliasing -Wdisabled-optimization -fopenmp'
CXXFLAGS_PROF=' -O2 -felide-constructors -funroll-loops -fstrict-aliasing -Wdisabled-optimization -pg -fopenmp'
CXXSHAREDFLAG=''
CYGPATH_W='echo'
DEFS='-DHAVE_CONFIG_H'
DEPDIR='.deps'
DLLTOOL='false'
DOT='/Users/guyer/bin/dot'
DOTPATH='/Users/guyer/Documents/research/libmesh/doc'
DOXYGEN='/Users/guyer/.homebrew/bin/doxygen'
DSYMUTIL='dsymutil'
DTK_MAKEFILE_EXPORT=''
DUMPBIN=''
ECHO_C='\c'
ECHO_N=''
ECHO_T=''
EGREP='/usr/bin/grep -E'
EIGEN_INCLUDE=''
EXEEXT=''
EXODUS_INCLUDE='-I$(top_srcdir)/contrib/exodusii/v5.22/exodus/cbind/include'
F77='mpif77'
FC='mpif90'
FCFLAGS=''
FFLAGS=' -fopenmp'
FGREP='/usr/bin/grep -F'
FLIBS=''
FPARSER_DEVEL_FALSE=''
FPARSER_DEVEL_TRUE='#'
FPARSER_INCLUDE='-I$(top_srcdir)/contrib/fparser'
FPARSER_LIBRARY='$(EXTERNAL_LIBDIR)/libfparser$(libext)'
FPARSER_NO_SUPPORT_OPTIMIZER_FALSE='#'
FPARSER_NO_SUPPORT_OPTIMIZER_TRUE=''
FPARSER_RELEASE_FALSE='#'
FPARSER_RELEASE_TRUE=''
FPARSER_SUPPORT_OPTIMIZER_FALSE=''
FPARSER_SUPPORT_OPTIMIZER_TRUE='#'
GCOV_FLAGS=''
GIT_CHECKOUT_FALSE='#'
GIT_CHECKOUT_TRUE=''
GIT_REVISION='fef96121da67e9fe126c586c8e63a0e1dbc19003'
GLPK_INCLUDE=''
GLPK_LIBRARY=''
GMV_INCLUDE='-I$(top_srcdir)/contrib/gmv'
GMV_LIBRARY='$(EXTERNAL_LIBDIR)/libgmv$(libext)'
GREP='/usr/bin/grep'
GXX_VERSION='gcc4.2'
GZSTREAM_INCLUDE='-I$(top_srcdir)/contrib/gzstream'
GZSTREAM_LIB='$(EXTERNAL_LIBDIR)/libgzstream$(libext) -lz'
HAVE_DOT='YES'
HAVE_GCOV_TOOLS='0'
HDF5_CFLAGS=''
HDF5_CPPFLAGS=''
HDF5_CXXLIBS=''
HDF5_DIR=''
HDF5_FLIBS=''
HDF5_LIBS=''
HDF5_PREFIX=''
INSTALL_DATA='${INSTALL} -m 644'
INSTALL_PROGRAM='${INSTALL}'
INSTALL_SCRIPT='${INSTALL}'
INSTALL_STRIP_PROGRAM='$(install_sh) -c -s'
LASPACK_INCLUDE='-I$(top_srcdir)/contrib/laspack'
LASPACK_LIB='$(EXTERNAL_LIBDIR)/liblaspack$(libext)'
LD='/usr/libexec/gcc/i686-apple-darwin10/4.2.1/ld'
LDFLAGS=''
LIBHILBERT_INCLUDE='-I$(top_srcdir)/contrib/libHilbert/include'
LIBHILBERT_LIBRARY='$(EXTERNAL_LIBDIR)/libHilbert$(libext)'
LIBMESH_DBG_MODE_FALSE='#'
LIBMESH_DBG_MODE_TRUE=''
LIBMESH_DEVEL_MODE_FALSE='#'
LIBMESH_DEVEL_MODE_TRUE=''
LIBMESH_ENABLE_COMPLEX_FALSE=''
LIBMESH_ENABLE_COMPLEX_TRUE='#'
LIBMESH_ENABLE_CPPUNIT_FALSE=''
LIBMESH_ENABLE_CPPUNIT_TRUE='#'
LIBMESH_ENABLE_EIGEN_FALSE=''
LIBMESH_ENABLE_EIGEN_TRUE='#'
LIBMESH_ENABLE_EXAMPLES_FALSE='#'
LIBMESH_ENABLE_EXAMPLES_TRUE=''
LIBMESH_ENABLE_EXODUS_FALSE='#'
LIBMESH_ENABLE_EXODUS_TRUE=''
LIBMESH_ENABLE_EXODUS_V509_FALSE=''
LIBMESH_ENABLE_EXODUS_V509_TRUE='#'
LIBMESH_ENABLE_EXODUS_V522_FALSE='#'
LIBMESH_ENABLE_EXODUS_V522_TRUE=''
LIBMESH_ENABLE_FPARSER_FALSE='#'
LIBMESH_ENABLE_FPARSER_TRUE=''
LIBMESH_ENABLE_GLIBCXX_DEBUGGING_FALSE=''
LIBMESH_ENABLE_GLIBCXX_DEBUGGING_TRUE='#'
LIBMESH_ENABLE_GLPK_FALSE=''
LIBMESH_ENABLE_GLPK_TRUE='#'
LIBMESH_ENABLE_GMV_FALSE='#'
LIBMESH_ENABLE_GMV_TRUE=''
LIBMESH_ENABLE_GZSTREAMS_FALSE='#'
LIBMESH_ENABLE_GZSTREAMS_TRUE=''
LIBMESH_ENABLE_HDF5_FALSE=''
LIBMESH_ENABLE_HDF5_TRUE='#'
LIBMESH_ENABLE_INFINITE_ELEMENTS_FALSE='#'
LIBMESH_ENABLE_INFINITE_ELEMENTS_TRUE=''
LIBMESH_ENABLE_LASPACK_FALSE='#'
LIBMESH_ENABLE_LASPACK_TRUE=''
LIBMESH_ENABLE_LIBHILBERT_FALSE='#'
LIBMESH_ENABLE_LIBHILBERT_TRUE=''
LIBMESH_ENABLE_METIS_FALSE='#'
LIBMESH_ENABLE_METIS_TRUE=''
LIBMESH_ENABLE_NANOFLANN_FALSE='#'
LIBMESH_ENABLE_NANOFLANN_TRUE=''
LIBMESH_ENABLE_NEMESIS_FALSE='#'
LIBMESH_ENABLE_NEMESIS_TRUE=''
LIBMESH_ENABLE_NEMESIS_V309_FALSE=''
LIBMESH_ENABLE_NEMESIS_V309_TRUE='#'
LIBMESH_ENABLE_NEMESIS_V522_FALSE='#'
LIBMESH_ENABLE_NEMESIS_V522_TRUE=''
LIBMESH_ENABLE_NETCDF_FALSE='#'
LIBMESH_ENABLE_NETCDF_TRUE=''
LIBMESH_ENABLE_NETCDF_V3_FALSE=''
LIBMESH_ENABLE_NETCDF_V3_TRUE='#'
LIBMESH_ENABLE_NETCDF_V4_FALSE='#'
LIBMESH_ENABLE_NETCDF_V4_TRUE=''
LIBMESH_ENABLE_PARMETIS_FALSE='#'
LIBMESH_ENABLE_PARMETIS_TRUE=''
LIBMESH_ENABLE_PETSC_FALSE=''
LIBMESH_ENABLE_PETSC_TRUE='#'
LIBMESH_ENABLE_SFC_FALSE='#'
LIBMESH_ENABLE_SFC_TRUE=''
LIBMESH_ENABLE_SLEPC_FALSE=''
LIBMESH_ENABLE_SLEPC_TRUE='#'
LIBMESH_ENABLE_TECIO_FALSE='#'
LIBMESH_ENABLE_TECIO_TRUE=''
LIBMESH_ENABLE_TECPLOT_FALSE=''
LIBMESH_ENABLE_TECPLOT_TRUE='#'
LIBMESH_ENABLE_TETGEN_FALSE='#'
LIBMESH_ENABLE_TETGEN_TRUE=''
LIBMESH_ENABLE_TRIANGLE_FALSE='#'
LIBMESH_ENABLE_TRIANGLE_TRUE=''
LIBMESH_ENABLE_VTK_FALSE=''
LIBMESH_ENABLE_VTK_TRUE='#'
LIBMESH_INSTALL_INTERNAL_BOOST_FALSE='#'
LIBMESH_INSTALL_INTERNAL_BOOST_TRUE=''
LIBMESH_OPROF_MODE_FALSE=''
LIBMESH_OPROF_MODE_TRUE='#'
LIBMESH_OPT_MODE_FALSE='#'
LIBMESH_OPT_MODE_TRUE=''
LIBMESH_PROF_MODE_FALSE=''
LIBMESH_PROF_MODE_TRUE='#'
LIBMESH_VPATH_BUILD_FALSE=''
LIBMESH_VPATH_BUILD_TRUE='#'
LIBOBJS=''
LIBS=''
LIBTOOL='$(SHELL) $(top_builddir)/libtool'
LIPO='lipo'
LN_S='ln -s'
LTLIBOBJS=''
MAINT=''
MAINTAINER_MODE_FALSE='#'
MAINTAINER_MODE_TRUE=''
MAKEINFO='${SHELL} /Users/guyer/Documents/research/libmesh/build-aux/missing --run makeinfo'
MANIFEST_TOOL=':'
METHOD=''
METHODS='dbg devel opt'
METIS_INCLUDE='-I$(top_srcdir)/contrib/metis/include'
METIS_LIB='$(EXTERNAL_LIBDIR)/libmetis$(libext) $(EXTERNAL_LIBDIR)/libGK$(libext)'
MKDIR_P='build-aux/install-sh -c -d'
ML_INCLUDES=''
ML_LIBS=''
ML_MAKEFILE_EXPORT=''
MPCXX=''
MPI='/usr'
MPI_IMPL='built-in'
MPI_INCLUDES_PATH='/usr/include'
MPI_INCLUDES_PATHS=''
MPI_LIBS=''
MPI_LIBS_PATH='/usr/lib'
MPI_LIBS_PATHS=''
NANOFLANN_INCLUDE='-I$(top_srcdir)/contrib/nanoflann/include'
NEMESIS_INCLUDE='-I$(top_srcdir)/contrib/nemesis/v5.22/nemesis'
NETCDF_INCLUDE='-I$(top_srcdir)/contrib/netcdf/v4/include'
NM='/usr/bin/nm'
NMEDIT='nmedit'
NODEPRECATEDFLAG='-Wno-deprecated'
NOX_INCLUDES=''
NOX_LIBS=''
NOX_MAKEFILE_EXPORT=''
OBJDUMP='false'
OBJEXT='o'
OPENMP_CFLAGS='-fopenmp'
OPENMP_CXXFLAGS='-fopenmp'
OPENMP_FFLAGS='-fopenmp'
OPROFILE_FLAGS='-g -fno-omit-frame-pointer'
OTOOL64=':'
OTOOL='otool'
PACKAGE='libmesh'
PACKAGE_BUGREPORT='libmesh-users@lists.sourceforge.net'
PACKAGE_NAME='libmesh'
PACKAGE_STRING='libmesh 0.9.1pre'
PACKAGE_TARNAME='libmesh'
PACKAGE_URL='http://libmesh.sourceforge.net'
PACKAGE_VERSION='0.9.1pre'
PARMETIS_INCLUDE='-I$(top_srcdir)/contrib/parmetis/include'
PARMETIS_LIB='$(EXTERNAL_LIBDIR)/libparmetis$(libext)'
PATH_SEPARATOR=':'
PERL='/usr/bin/perl'
PETSCARCH=''
PETSCINCLUDEDIRS=''
PETSCLINKLIBS=''
PETSC_ARCH=''
PETSC_CC_INCLUDES=''
PETSC_DIR=''
PETSC_FC_INCLUDES=''
PKG_CONFIG='/Users/guyer/.homebrew/bin/pkg-config'
PROFILING_FLAGS='-pg'
PWD='/Users/guyer/Documents/research/libmesh'
RANLIB='ranlib'
RPATHFLAG='-Wl,-rpath,'
SED='/usr/bin/sed'
SET_MAKE=''
SFC_INCLUDE='-I$(top_srcdir)/contrib/sfcurves'
SFC_LIB='$(EXTERNAL_LIBDIR)/libsfcurves$(libext)'
SHELL='/bin/sh'
SLEPC_DIR=''
SLEPC_INCLUDE=''
SLEPC_LIBS=''
STRIP='strip'
TBB_INCLUDE=''
TBB_LIBRARY=''
TECIO_CPPFLAGS='-DDARWIN -DLONGIS64 '
TECIO_INCLUDE='-I$(top_srcdir)/contrib/tecplot/tecio/include'
TECPLOT_INCLUDE=''
TECPLOT_LIBRARY=''
TETGEN_INCLUDE='-I$(top_srcdir)/contrib/tetgen'
TETGEN_LIBRARY='$(EXTERNAL_LIBDIR)/libtetgen$(libext)'
TPETRA_INCLUDES=''
TPETRA_LIBS=''
TPETRA_MAKEFILE_EXPORT=''
TRIANGLE_INCLUDE='-I$(top_srcdir)/contrib/triangle'
TRIANGLE_LIBRARY='$(EXTERNAL_LIBDIR)/libtriangle$(libext)'
TRILINOS_DIR='no'
TRILINOS_INCLUDES=''
TRILINOS_LIBS=''
TRILINOS_MAKEFILE_EXPORT=''
VERSION='0.9.1pre'
VTK_DIR='/usr'
VTK_INCLUDE=''
VTK_LIBRARY=''
XZ='xz'
YACC='bison -y'
YFLAGS=''
ac_ct_AR='ar'
ac_ct_CC='mpicc'
ac_ct_CXX='mpicxx'
ac_ct_DUMPBIN=''
ac_ct_F77='mpif77'
ac_ct_FC='mpif90'
am__EXEEXT_FALSE=''
am__EXEEXT_TRUE='#'
am__fastdepCC_FALSE='#'
am__fastdepCC_TRUE=''
am__fastdepCXX_FALSE='#'
am__fastdepCXX_TRUE=''
am__include='include'
am__isrc=''
am__leading_dot='.'
am__nodep='_no'
am__quote=''
am__tar='tar --format=ustar -chf - "$$tardir"'
am__untar='tar -xf -'
bindir='${exec_prefix}/bin'
build='x86_64-apple-darwin10.8.0'
build_alias=''
build_cpu='x86_64'
build_os='darwin10.8.0'
build_vendor='apple'
datadir='${datarootdir}'
datarootdir='${prefix}/share'
docdir='${datarootdir}/doc/${PACKAGE_TARNAME}'
dvidir='${docdir}'
enablelegacyincludepaths='no'
exec_prefix='${prefix}'
gitquery='/usr/local/git/bin/git'
have_gcov=''
host='x86_64-apple-darwin10.8.0'
host_alias=''
host_cpu='x86_64'
host_os='darwin10.8.0'
host_vendor='apple'
htmldir='${docdir}'
includedir='${prefix}/include'
infodir='${datarootdir}/info'
install_sh='${SHELL} /Users/guyer/Documents/research/libmesh/build-aux/install-sh'
libdir='${exec_prefix}/lib'
libexecdir='${exec_prefix}/libexec'
libmesh_CFLAGS=' '
libmesh_CPPFLAGS=''
libmesh_CXXFLAGS=' '
libmesh_contrib_INCLUDES='-I$(top_srcdir)/contrib/nanoflann/include -I$(top_srcdir)/contrib/fparser -I$(top_srcdir)/contrib/libHilbert/include -I$(top_srcdir)/contrib/nemesis/v5.22/nemesis -I$(top_srcdir)/contrib/exodusii/v5.22/exodus/cbind/include -I$(top_srcdir)/contrib/netcdf/v4/include -I$(top_srcdir)/contrib/gmv -I$(top_srcdir)/contrib/triangle -I$(top_srcdir)/contrib/tetgen -I$(top_srcdir)/contrib/parmetis/include -I$(top_srcdir)/contrib/metis/include -I$(top_srcdir)/contrib/tecplot/tecio/include -I$(top_srcdir)/contrib/gzstream -I$(top_srcdir)/contrib/sfcurves -I$(top_srcdir)/contrib/laspack '
libmesh_optional_INCLUDES='-I./contrib/boost/include'
libmesh_optional_LIBS='-lz'
localedir='${datarootdir}/locale'
localstatedir='${prefix}/var'
mandir='${datarootdir}/man'
mkdir_p='$(MKDIR_P)'
oldincludedir='/usr/include'
pdfdir='${docdir}'
petscmajor=''
petscmajorminor=''
petscversion=''
prefix='/usr/local'
program_transform_name='s,x,x,'
psdir='${docdir}'
sbindir='${exec_prefix}/sbin'
sharedstatedir='${prefix}/com'
subdirs=' contrib/netcdf/v4'
sysconfdir='${prefix}/etc'
target='x86_64-apple-darwin10.8.0'
target_alias=''
target_cpu='x86_64'
target_os='darwin10.8.0'
target_vendor='apple'
vtkbuild=''
vtkmajor=''
vtkversion=''
## ----------- ##
## confdefs.h. ##
## ----------- ##
/* confdefs.h */
#define PACKAGE_NAME "libmesh"
#define PACKAGE_TARNAME "libmesh"
#define PACKAGE_VERSION "0.9.1pre"
#define PACKAGE_STRING "libmesh 0.9.1pre"
#define PACKAGE_BUGREPORT "libmesh-users@lists.sourceforge.net"
#define PACKAGE_URL "http://libmesh.sourceforge.net"
#define CONFIGURE_INFO "./configure '--disable-tecplot' '--enable-tecio' '--with-netcdf=old' '--with-exodus=old' '--with-nemesis=old'"
#define PACKAGE "libmesh"
#define VERSION "0.9.1pre"
#define STDC_HEADERS 1
#define HAVE_SYS_TYPES_H 1
#define HAVE_SYS_STAT_H 1
#define HAVE_STDLIB_H 1
#define HAVE_STRING_H 1
#define HAVE_MEMORY_H 1
#define HAVE_STRINGS_H 1
#define HAVE_INTTYPES_H 1
#define HAVE_STDINT_H 1
#define HAVE_UNISTD_H 1
#define HAVE_DLFCN_H 1
#define LT_OBJDIR ".libs/"
#define MAJOR_VERSION 0
#define MINOR_VERSION 9
#define MICRO_VERSION 1
#define LIB_VERSION "0.9.1pre"
#define LIB_RELEASE ""
#define CXX "mpicxx"
#define IO_COMPATIBILITY_VERSION "0.7.4"
#define HAVE_NAMESPACES /**/
#define DEFAULT_DOUBLE_PRECISION 1
#define DEFAULT_SCALAR_TYPE double
#define restrict __restrict
#define HAVE_GETPWUID 1
#define ENABLE_EXCEPTIONS 1
#define SIZEOF_SHORT_INT 2
#define SIZEOF_INT 4
#define SIZEOF_UNSIGNED_INT 4
#define SIZEOF_LONG_INT 8
#define SIZEOF_FLOAT 4
#define SIZEOF_DOUBLE 8
#define SIZEOF_VOID_P 8
#define SIZEOF_FUNCTION_POINTER 8
#define HAVE_RTTI /**/
#define HAVE_GETOPT_H 1
#define HAVE_CSIGNAL 1
#define HAVE_SYS_RESOURCE_H 1
#define HAVE_LOCALE /**/
#define HAVE_SSTREAM /**/
#define HAVE_STRINGSTREAM /**/
#define HAVE_FENV_H 1
#define HAVE_XMMINTRIN_H 1
#define HAVE_TR1_UNORDERED_MULTIMAP 1
#define BEST_UNORDERED_MULTIMAP std::tr1::unordered_multimap
#define INCLUDE_UNORDERED_MULTIMAP <tr1/unordered_map>
#define DEFINE_HASH_STRING /**/
#define DEFINE_HASH_POINTERS /**/
#define HAVE_TR1_UNORDERED_MAP 1
#define BEST_UNORDERED_MAP std::tr1::unordered_map
#define INCLUDE_UNORDERED_MAP <tr1/unordered_map>
#define DEFINE_HASH_STRING /**/
#define DEFINE_HASH_POINTERS /**/
#define HAVE_TR1_UNORDERED_SET 1
#define BEST_UNORDERED_SET std::tr1::unordered_set
#define INCLUDE_UNORDERED_SET <tr1/unordered_set>
#define DEFINE_HASH_STRING /**/
#define DEFINE_HASH_POINTERS /**/
#define HAVE_DLFCN_H 1
#define HAVE_GCC_ABI_DEMANGLE 1
#define HAVE_GLIBC_BACKTRACE 1
#define HAVE_OPENMP 1
#define REQUIRE_SEPARATE_NAMESPACE 1
#define BOUNDARY_ID_BYTES 2
#define DOF_ID_BYTES 4
#define PROCESSOR_ID_BYTES 2
#define SUBDOMAIN_ID_BYTES 2
#define ENABLE_AMR 1
#define ENABLE_VSMOOTHER 1
#define ENABLE_PERIODIC 1
#define ENABLE_DIRICHLET 1
#define ENABLE_GHOSTED 1
#define ENABLE_HIGHER_ORDER_SHAPES 1
#define ENABLE_SECOND_DERIVATIVES 1
#define HAVE_RPC_RPC_H 1
#define HAVE_XDR 1
#define USE_REAL_NUMBERS 1
#define ENABLE_REFERENCE_COUNTING 1
#define HAVE_BOOST /**/
#define HAVE_MPI 1
#define HAVE_LASPACK 1
#define HAVE_SFCURVES 1
#define HAVE_ZLIB_H 1
#define HAVE_GZSTREAM 1
#define HAVE_BZIP 1
#define HAVE_XZ 1
#define HAVE_TECPLOT_API 1
#define HAVE_TECPLOT_API_112 1
#define HAVE_METIS 1
#define HAVE_PARMETIS 1
#define HAVE_TETGEN 1
#define HAVE_TRIANGLE 1
#define HAVE_GMV 1
#define HAVE_NETCDF 1
#define HAVE_EXODUS_API 1
#define HAVE_NEMESIS_API 1
#define HAVE_LIBHILBERT 1
#define HAVE_FPARSER 1
#define HAVE_FPARSER_DEVEL 0
#define HAVE_NANOFLANN 1
#define BUILD_USER "guyer"
#define BUILD_ARCH "x86_64-apple-darwin10.8.0"
#define BUILD_HOST "some.host.name"
#define BUILD_VERSION "fef96121da67e9fe126c586c8e63a0e1dbc19003"
#define BUILD_DEVSTATUS "Development Build"
#define BUILD_DATE __DATE__" "__TIME__
configure: exit 0
@benkirk
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benkirk commented Feb 14, 2013

Thanks, I'll see about recreating this on my 10.8 machine!

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