| Menge | Zutat |
|---|---|
| 250 g | altbackenes Brot, z. B. Ruchbrot |
| 50 g | harte Amaretti |
| 40 g | Zucker |
| 0.5 | Beutel Vanillezucker |
| 5 dl | Milch |
| 25 g | Baumnüsse |
David Haberthür habi
habi
/ sed_citations.sh
Last active
December 3, 2020 13:43
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| sed -i 's/Haberthuer2010/doi:10.1107\/S0909049510019618/g' *.md | |
| sed -i 's/Haberthur2013/doi:10.1152\/japplphysiol.00642.2013/g' *.md | |
| sed -i 's/Haberth_r2013/doi:10.1152\/japplphysiol.00642.2013/g' *.md | |
| sed -i 's/Haberth_r_2013/doi:10.1152\/japplphysiol.00642.2013/g' *.md | |
| sed -i 's/haberthr/doi:10.5281\/zenodo.3768407/g' *.md | |
| sed -i 's/Barr__2014/doi:10.14814\/phy2.12063/g' *.md | |
| sed -i 's/Barr__2016/doi:10.1152\/ajplung.00325.2016/g' *.md | |
| sed -i 's/Tschanz_2014/doi:10.1152\/japplphysiol.01355.2013/g' *.md | |
| sed -i 's/TSCHANZ_2011/doi:10.1111\/j.1365-2818.2010.03481.x/g' *.md | |
| sed -i 's/Schittny_2008/doi:10.1152\/ajplung.00296.2007/g' *.md |
habi
/ cropper.py
Created
November 24, 2020 12:12
Crop a (DASK) array of (tomographic) data to the biggest blob present in it.
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| def cropper(image, | |
| despeckle=True, | |
| verbose=False, | |
| threshold=50): | |
| '''Crop array to biggest item in it''' | |
| dimensions = len(image.shape) | |
| if verbose: | |
| print('Cropping %s-dimensional image' % dimensions) | |
| # Threshold | |
| thresholded = image > threshold |
habi
/ cropper.py
Last active
September 28, 2020 15:03
Function to crop a dataset to the smallest cuboid that contains (denoised) data. Displays the data if requested.
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| def cropper(image, | |
| despeckle=True, | |
| verbose=False, | |
| threshold=50): | |
| '''Crop array to biggest item in it''' | |
| dimensions = len(image.shape) | |
| if verbose: | |
| print('Cropping %s-dimensional image' % dimensions) | |
| # Threshold | |
| thresholded = image > threshold |
habi
/ bern.geojson
Created
July 27, 2020 21:35
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| youtube-dl -f 'bestvideo[ext=mp4]+bestaudio[ext=m4a]/mp4' http://habi.gna.ch/u/yta |
habi
/ download.sh
Created
July 17, 2019 10:01
Download all the raw gill data for the ZebraFishGills project. Warning, this downloads 12 GB of data and unzips it!
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| # Controls | |
| wget -nc -O c01.zip https://osf.io/7utfb/download | |
| wget -nc -O c02.zip https://osf.io/yg4xr/download | |
| wget -nc -O c03.zip https://osf.io/9awx4/download | |
| wget -nc -O c04.zip https://osf.io/57xbk/download | |
| wget -nc -O c05.zip https://osf.io/8kucf/download | |
| wget -nc -O c06.zip https://osf.io/ntxua/download | |
| wget -nc -O c07.zip https://osf.io/bhqez/download | |
| wget -nc -O c08.zip https://osf.io/xwu97/download | |
| wget -nc -O c09.zip https://osf.io/qp584/download |
habi
/ torta di pane.md
Last active
February 6, 2019 18:53
Torta di pane (Recipe for the TOMCAT "Science and Cake" seminar)
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habi
/ histogram.ipynb
Last active
December 19, 2018 15:57
Quick and dirty histogram for https://forum.image.sc/t/python-code-to-create-histogram-from-an-image/21747/2?u=habi
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