train kernel (libsvm) - requires distances, ids, script used to run on an academic cluster

krnl-train.sh

#!/bin/sh

#$ -M myemail@address.ch
#$ -m a
#$ -l h_cpu=16:00:00
#$ -l scratch=1,scratch_size=4G,scratch_files=1000
#$ -l h_vmem=4G
#$ -t 1-31

cd /home/userdir/ProjectDir/distances

gamma_exponent =$( echo $SGE_TASK_ID -16 | bc -l)

ruby txt2krnl.rb trainset-ed id.txt $gamma_exponent > train-g$gamma_exponent.krnl

echo $SGE_TASK_ID