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harish0201/Alpine_clusterProfiler.txt

Created September 28, 2021 09:39
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Alpinelinux based clusterProfiler installation
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Alpine_clusterProfiler.txt
FROM rhub/r-minimal
RUN installr -d -a "curl-dev gfortran libjpeg-turbo-dev libpng-dev libpng libjpeg-turbo" ggplot2 cowplot clusterProfiler org.Hs.eg.db org.Mm.eg.db org.Cf.eg.db org.Sc.sgd.db
&& apk del --no-cache
WORKDIR /data
RUN mkdir -p /data/in /data/out
COPY ClusterProfiler_Enrichment.R /data/
ENV PATH=$PATH:/data/:/usr/bin:/bin
ENTRYPOINT [ "Rscript", "/data/ClusterProfiler_Enrichment.R"]
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