Harish harish0201
danilotat
/ query_ensembl.py
Last active
February 26, 2024 15:26
Fully remote, it downloads GTF annotation file from Ensembl FTP repo for the provided organism and version, than return .tsv file with gene_id and hgnc_symbol.
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| #!/usr/bin/python3 | |
| import sys | |
| import os | |
| import tempfile | |
| import gzip | |
| import argparse | |
| from ftplib import FTP | |