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hgbrian/gist:e2eac7ea684448519dc6

Last active August 29, 2015 14:05
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Flagellin alignment
Raw
gistfile1.txt
CLUSTAL O(121) multiple sequence alignment
LifeTech GCCACCATGGCCCAAGTGATCAACACCAACAGCCTGAGCCTGATCACCCAGAACAACATC
Slovenia ------atggcacaagtcattaataccaacagcctctcgctgatcactcaaaataatatc
***** ***** ** ** *********** ******** ** ** ** ***
LifeTech AACAAGAACCAGAGCGCCCTGAGCAGCAGCATCGAGAGACTGAGCAGCGGCCTGAGAATC
Slovenia aacaagaaccagtctgcgctgtcgagttctatcgagcgtctgtcttctggcttgcgtatt
************ ** *** ** ****** * *** *** ** * **
LifeTech AACAGCGCCAAGGACGATGCCGCTGGCCAGGCTATCGCCAACAGATTCACCAGCAACATC
Slovenia aacagcgcgaaggatgacgcagcgggtcaggcgattgctaaccgtttcacctctaacatt
******** ***** ** ** ** ** ***** ** ** *** * ****** *****
LifeTech AAGGGCCTGACCCAGGCCGCCAGAAACGCCAACGATGGCATCAGCGTGGCCCAGACAACA
Slovenia aaaggcctgactcaggcggcccgtaacgccaacgacggtatctccgttgcgcagaccacc
** ******** ***** *** * *********** ** *** *** ** ***** **
LifeTech GAGGGCGCACTGAGCGAGATCAACAACAACCTGCAGAGAGTGCGCGAGCTGACCGTGCAG
Slovenia gaaggcgcgctgtccgaaatcaacaacaacttacagcgtgtgcgtgaactgacggtacag
** ***** *** *** ************ * *** * ***** ** ***** ** ***
LifeTech GCCACCACAGGCACAAACAGCGAGAGCGACCTGTCCAGCATCCAGGACGAGATCAAGAGC
Slovenia gccactaccggtactaactctgagtctgatctgtcttctatccaggacgaaattaaatcc
***** ** ** ** *** *** ** ***** *********** ** ** *
LifeTech AGACTGGATGAGATCGACAGAGTGTCCGGCCAGACCCAGTTCAACGGCGTGAACGTGCTG
Slovenia cgtctggatgaaattgaccgcgtatctggtcagacccagttcaacggcgtgaacgtgctg
* ******** ** *** * ** ** ** ******************************
LifeTech GCCAAGAACGGCAGCATGAAGATCCAAGTGGGCGCCAACGACAACCAGACCATCACCATC
Slovenia gcaaaaaatggctccatgaaaatccaggttggcgcaaatgataaccagactatcactatc
** ** ** *** ****** ***** ** ***** ** ** ******** ***** ***
LifeTech GACCTGAAGCAGATCGACGCCAAGACCCTGGGCCTGGACGGCTTCTCTGTGAAGGCCCTG
Slovenia gatctgaagcagattgatgctaaaactcttggccttgatggttttagcgttaaagcgtta
** *********** ** ** ** ** ** ***** ** ** ** ** ** ** *
LifeTech ATCACAGCCAGCGGCGACATCAGCCTGACCTTCAAACAGGTGGACGGCGTGAACGACGTG
Slovenia atcacggcttctggggatattagcttgacttttaaacaagtggatggcgtgaatgatgta
***** ** ** ** ** *** **** ** ***** ***** ******** ** **
LifeTech ACCCTGGAAAGCGTGAAGGTGTCCAGCTCTGCCGGCACAGGCATCGGCGTGCTGGCTGAA
Slovenia actttagagagcgtaaaagtttctagttcagcaggcacggggatcggtgtgttagcggaa
** * ** ***** ** ** ** ** ** ** ***** ** ***** *** * ** ***
LifeTech GTGATTAACAAGAACAGCAACAGGACCGGCGTGAAGGCCTACGCCAGCGTGATCACCACA
Slovenia gtgattaacaaaaattctaaccgaacaggggttaaagcttatgcgagcgttatcaccacg
*********** ** *** * ** ** ** ** ** ** ** ***** ********
LifeTech AGCGACGTGGCCGTGCAGAGCGGCAGCCTGTCTAACCTGACCCTGAACGGCATCCACCTG
Slovenia agcgatgtggcggtccaatcaggaagtttgagtaatttaactttaaatgggatccatttg
***** ***** ** ** ** ** ** *** * ** * ** ** ***** **
LifeTech GGCAATATCGCCGATATCAAGAAGAACGACAGCGACGGCAGACTGGTGGCCGCCATCAAC
Slovenia ggtaatatcgcagatattaagaaaaatgactcagacggaaggttagtcgcagcgatcaat
** ******** ***** ***** ** *** ***** ** * ** ** ** *****
LifeTech GCCGTGACAAGCGAGACAGGCGTGGAAGCCTACACCGACCAGAAGGGCAGACTGAACCTG
Slovenia gcggttacttcagaaaccggcgtggaagcttatacggatcaaaaagggcgcttgaatttg
** ** ** ** ** *********** ** ** ** ** ** ** * **** **
LifeTech AGATCCATCGACGGCAGGGGCATCGAAATCAAGACCGACAGCGTGTCCAACGGCCCCTCC
Slovenia cgcagtatagatggtcgtgggattgaaatcaaaaccgatagcgtcagtaatgggcctagt
* ** ** ** * ** ** ******** ***** ***** ** ** **
LifeTech GCCCTGACAATGGTCAACGGCGGACAGGACCTGACCAAGGGCAGCACCAACTACGGCAGG
Slovenia gctttaacgatggtcaatggcggtcaggatttaacaaaaggttctactaactatgggagg
** * ** ******** ***** ***** * ** ** ** ** ***** ** ***
LifeTech CTGTCCCTGACAAGACTGGACGCCAAGTCCATCAACGTGGTGTCCGCCAGCGACTCCCAG
Slovenia ctttctctcacacgcttagacgctaaaagcatcaatgtcgtttcggcttctgattcgcaa
** ** ** *** * * ***** ** ****** ** ** ** ** ** ** **
LifeTech CACCTGGGCTTTACAGCTATCGGCTTCGGCGAGAGCCAGGTGGCCGAGACTACCGTGAAT
Slovenia catttaggtttcacagcgattggttttggggaatctcaagtggcagaaaccacggtgaat
** * ** ** ***** ** ** ** ** ** ** ***** ** ** ** ******
LifeTech CTGAGGGACGTGACCGGCAACTTCAACGCTAACGTGAAGTCCGCCTCCGGCGCTAACTAC
Slovenia ttgcgcgatgttactgggaattttaacgctaatgtcaaatcagccagtggcgcgaactat
** * ** ** ** ** ** ** ******** ** ** ** *** ***** *****
LifeTech AACGCTGTGATCGCCTCTGGCAACCAGAGCCTGGGAAGCGGCGTGACCACACTGAGAGCT
Slovenia aacgccgtgatcgctagcggtaaccaaagcttgggatctggggttacaaccttaagagct
***** ******** ** ***** *** ***** ** ** ** ** * ******
LifeTech GTGGCCAACGGCAAGACCACCGACCCCCTGAAGGCTCTGGACGACGCTATCGCCTCCGTG
Slovenia gttgcaaatggtaaaaccacggatccgctgaaagcgctggacgatgctatcgcatctgta
** ** ** ** ** ***** ** ** ***** ** ******** ******** ** **
LifeTech GACAAGTTCAGATCCAGCCTGGGCGCTGTGCAGAACAGACTGGACAGCGCCGTGACCAAC
Slovenia gacaaattccgttcttccctcggtgcggtgcaaaaccgtctggattccgcggttaccaac
***** *** * ** *** ** ** ***** *** * ***** *** ** ******
LifeTech CTGAACAACACCACCACCAACCTGTCCGAGGCCCAGAGCAGAATCCAGGATGCCGACTAC
Slovenia ctgaacaacaccactaccaacctgtctgaagcgcagtcccgtattcaggacgccgactat
************** *********** ** ** *** * * ** ***** ********
LifeTech GCCACCGAGGTGTCCAACATGAGCAAGGCCCAGATCATCCAGCAGGCCGGCAACTCTGTG
Slovenia gcgaccgaagtgtccaatatgtcgaaagcgcagatcatccagcaggccggtaactccgtg
** ***** ******** *** ** ** ******************** ***** ***
LifeTech CTGGCTAAGGCCAACCAGGTGCCCCAGCAGGTGCTGAGTCTGCTGCAGGGA---------
Slovenia ttggcaaaagctaaccaggtaccgcagcaggttctgtctctgttacagggttactagagc
**** ** ** ******** ** ******** *** **** * *****
LifeTech -----------------------------
Slovenia gaggagaccaccaccaccaccaccactag
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