Skip to content

Instantly share code, notes, and snippets.

@hightemp
Created December 28, 2016 17:36
Show Gist options
  • Star 0 You must be signed in to star a gist
  • Fork 3 You must be signed in to fork a gist
  • Save hightemp/9e20e381cf33a4d2b6b0dc6613744c61 to your computer and use it in GitHub Desktop.
Save hightemp/9e20e381cf33a4d2b6b0dc6613744c61 to your computer and use it in GitHub Desktop.
Seek by Cynfab Python script with TK GUI client Supports Linux and Windows http://www.eevblog.com/forum/thermal-imaging/yet-another-cheap-thermal-imager-incoming/msg571129/#msg571129
###########################################################################
#
# This is a program to read thermal image data from the Seek PIR206 Thermal Camera
# It operates more or less in real time (if your platform is fast enough), since
# it is in python, don't expect it to run in real time on anything less than an i7.
# Someday, I may port it to C (and daresay C++) to improve the rate on other platforms.
# OpenCV will be useful here (I hope I live that long ;>))
#
# It can save a snapshot of the current raw image, cal image and colorized image
# Sorry, the file names are hardcoded...
# It supports several palettes, more are easily added in colorscale.py
# If you like Iron, BlackHot or WhiteHot, you are golden. I included RedGreen
# because "we're all in this together"
# just so you would have an excuse to change it to something like RainBow,
# which is in colorscale.py and should be trivial to enable.
#
# You will need to have python 2.7 (3+ may work, not tried)
# and PyUSB 1.0 (needs to be gotten as source from Github and installed as root)
# and PIL (Pillow fork, often in debian distros)
# and numpy (often in debian base distros)
# and scipy
# and Tkinter
# and ImageTk (part of Pillow but a seperate module)
# and maybe some other stuff like colorscale.py (see below)
#
# You will probably have to run this as root unless you get your udev/mdev rules
# set up to allow the Seek device to be used by other than root.
#
# Many thanks to the folks at eevblog, especially (in no particular order)
# miguelvp, marshallh, mikeselectricstuff, sgstair, Fry-kun, frenky and many others
# for the inspiration to figure this out
# This is not a finished product and you can use it if you like. Don't be
# suprised if there are bugs as I am NOT a programmer..... ;>))
# This is my first python program and has been a learning experience.
# There may also be a lot of test code sprinkled about which probably doesn't work.
# Updated the USB send/receive message code to use Fry-Kun's (sort of). And add
# a bit of error checking.
#
# There are also the beginings of some documentation on the Seek init sequence.
#
###########################################################################
import usb.core
import usb.util
import sys
from PIL import Image, ImageTk
import numpy
from numpy import array
import colorscale # used to colorize the image, be sure that colorscale.py is in the
# current directory
# Original colorscale.py from https://github.com/pklaus/python-colorscale
from scipy.misc import toimage
from scipy import ndimage
import Tkinter
class App(Tkinter.Tk):
def __init__(self,parent):
Tkinter.Tk.__init__(self,parent)
self.parent = parent
self.initialize()
# defs
def usbinit(self):
# find our Seek Thermal device 289d:0010
dev = usb.core.find(idVendor=0x289d, idProduct=0x0010)
# was it found?
if dev is None:
raise ValueError('Device not found')
# set the active configuration. With no arguments, the first
# configuration will be the active one
dev.set_configuration()
# get an endpoint instance
cfg = dev.get_active_configuration()
intf = cfg[(0,0)]
ep = usb.util.find_descriptor(
intf,
# match the first OUT endpoint
custom_match = \
lambda e: \
usb.util.endpoint_direction(e.bEndpointAddress) == \
usb.util.ENDPOINT_OUT)
assert ep is not None
return dev
# send_msg sends a message that does not need or get an answer
def send_msg(self,dev,bmRequestType, bRequest, wValue=0, wIndex=0, data_or_wLength=None, timeout=None):
assert (dev.ctrl_transfer(bmRequestType, bRequest, wValue, wIndex, data_or_wLength, timeout) == len(data_or_wLength))
# alias method to make code easier to read
# receive msg actually sends a message as well.
def receive_msg(self,dev,bmRequestType, bRequest, wValue=0, wIndex=0, data_or_wLength=None, timeout=None):
zz = dev.ctrl_transfer(bmRequestType, bRequest, wValue, wIndex, data_or_wLength, timeout) # == len(data_or_wLength))
return zz
# Documentation on the init sequence starts here
# Some day we will figure out what all this init stuff is and
# what the returned values mean.
# Here are what the commands mean, still no clue about the passed params or return values:
# ("WINDOWS_TARGET", 0, 0);
# ("ANDROID_TARGET", 1, 1);
# ("MACOS_TARGET", 2, 2);
# ("IOS_TARGET", 3, 3);
# There seem to be 2 SeekOperationMode(s) 0 = Sleep, 1 = Run
# BEGIN_MEMORY_WRITE = 82;
# COMPLETE_MEMORY_WRITE = 81;
# GET_BIT_DATA = 59;
# GET_CURRENT_COMMAND_ARRAY = 68;
# GET_DATA_PAGE = 65;
# GET_DEFAULT_COMMAND_ARRAY = 71;
# GET_ERROR_CODE = 53;
# * GET_FACTORY_SETTINGS = 88;
# * GET_FIRMWARE_INFO = 78;
# GET_IMAGE_PROCESSING_MODE = 63;
# * GET_OPERATION_MODE = 61;
# GET_RDAC_ARRAY = 77;
# GET_SHUTTER_POLARITY = 57;
# GET_VDAC_ARRAY = 74;
# * READ_CHIP_ID = 54;
# RESET_DEVICE = 89;
# SET_BIT_DATA_OFFSET = 58;
# SET_CURRENT_COMMAND_ARRAY = 67;
# SET_CURRENT_COMMAND_ARRAY_SIZE = 66;
# SET_DATA_PAGE = 64;
# SET_DEFAULT_COMMAND_ARRAY = 70;
# SET_DEFAULT_COMMAND_ARRAY_SIZE = 69;
# SET_FACTORY_SETTINGS = 87;
# * SET_FACTORY_SETTINGS_FEATURES = 86;
# SET_FIRMWARE_INFO_FEATURES = 85;
# * SET_IMAGE_PROCESSING_MODE = 62;
# * SET_OPERATION_MODE = 60;
# SET_RDAC_ARRAY = 76;
# SET_RDAC_ARRAY_OFFSET_AND_ITEMS = 75;
# SET_SHUTTER_POLARITY = 56;
# SET_VDAC_ARRAY = 73;
# SET_VDAC_ARRAY_OFFSET_AND_ITEMS = 72;
# * START_GET_IMAGE_TRANSFER = 83;
# * TARGET_PLATFORM = 84;
# TOGGLE_SHUTTER = 55;
# UPLOAD_FIRMWARE_ROW_SIZE = 79;
# WRITE_MEMORY_DATA = 80;
# Only a few of the above (*) seem to be used in the normal startup sequence
# End of documentation
# De-init the device
def deinit(self,dev):
msg = '\x00\x00'
for i in range(3):
self.send_msg(dev,0x41, 0x3C, 0, 0, msg) # 0x3c = 60 Set Operation Mode 0x0000 (Sleep)
# Camera initilization
def camerainit(self,dev):
try:
msg = '\x01'
self.send_msg(dev,0x41, 0x54, 0, 0, msg) # 0x54 = 84 Target Platform 0x01 = Android
except Exception as e:
self.deinit(dev)
msg = '\x01'
self.send_msg(dev,0x41, 0x54, 0, 0, msg) # 0x54 = 84 Target Platform 0x01 = Android
self.send_msg(dev,0x41, 0x3C, 0, 0, '\x00\x00') # 0x3c = 60 Set operation mode 0x0000 (Sleep)
ret1 = self.receive_msg(dev,0xC1, 0x4E, 0, 0, 4) # 0x4E = 78 Get Firmware Info
#print ret1
#array('B', [1, 3, 0, 0])
ret2 = self.receive_msg(dev,0xC1, 0x36, 0, 0, 12) # 0x36 = 54 Read Chip ID
#print ret2
#array('B', [20, 0, 12, 0, 86, 0, 248, 0, 199, 0, 69, 0])
self.send_msg(dev,0x41, 0x56, 0, 0, '\x20\x00\x30\x00\x00\x00') # 0x56 = 86 Set Factory Settings Features
ret3 = self.receive_msg(dev,0xC1, 0x58, 0, 0, 0x40) # 0x58 = 88 Get Factory Settings
#print ret3
#array('B', [2, 0, 0, 0, 0, 112, 91, 69, 0, 0, 140, 65, 0, 0, 192, 65, 79, 30, 86, 62, 160, 137, 64, 63, 234, 149, 178, 60, 0, 0, 0, 0, 0, 0, 0, 0, 72, 97, 41, 66, 124, 13, 1, 61, 206, 70, 240, 181, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 20, 66, 0, 0, 2, 67])
self.send_msg(dev,0x41, 0x56, 0, 0, '\x20\x00\x50\x00\x00\x00') # 0x56 = 86 Set Factory Settings Features
ret4 = self.receive_msg(dev,0xC1, 0x58, 0, 0, 0x40) # 0x58 = 88 Get Factory Settings
#print ret4
#array('B', [0, 0, 0, 0, 0, 0, 0, 0, 255, 255, 255, 255, 255, 255, 255, 255, 161, 248, 65, 63, 40, 127, 119, 60, 44, 101, 55, 193, 240, 133, 129, 63, 244, 253, 96, 66, 40, 15, 155, 63, 43, 127, 103, 186, 9, 144, 186, 52, 0, 0, 0, 0, 0, 0, 2, 67, 0, 0, 150, 67, 0, 0, 0, 0])
self.send_msg(dev,0x41, 0x56, 0, 0, '\x0C\x00\x70\x00\x00\x00') # 0x56 = 86 Set Factory Settings Features
ret5 = self.receive_msg(dev,0xC1, 0x58, 0, 0, 0x18) # 0x58 = 88 Get Factory Settings
#print ret5
#array('B', [0, 0, 0, 0, 255, 255, 255, 255, 190, 193, 249, 65, 205, 204, 250, 65, 48, 42, 177, 191, 200, 152, 147, 63])
self.send_msg(dev,0x41, 0x56, 0, 0, '\x06\x00\x08\x00\x00\x00') # 0x56 = 86 Set Factory Settings Features
ret6 = self.receive_msg(dev,0xC1, 0x58, 0, 0, 0x0C) # 0x58 = 88 Get Factory Settings
#print ret6
#array('B', [49, 52, 48, 99, 49, 48, 69, 52, 50, 78, 55, 49])
self.send_msg(dev,0x41, 0x3E, 0, 0, '\x08\x00') # 0x3E = 62 Set Image Processing Mode 0x0008
ret7 = self.receive_msg(dev,0xC1, 0x3D, 0, 0, 2) # 0x3D = 61 Get Operation Mode
#print ret7
#array('B', [0, 0])
self.send_msg(dev,0x41, 0x3E, 0, 0, '\x08\x00') # 0x3E = 62 Set Image Processing Mode 0x0008
self.send_msg(dev,0x41, 0x3C, 0, 0, '\x01\x00') # 0x3c = 60 Set Operation Mode 0x0001 (Run)
ret8 = self.receive_msg(dev,0xC1, 0x3D, 0, 0, 2) # 0x3D = 61 Get Operation Mode
#print ret8
#array('B', [1, 0])
#####################################################################
# build a matrix of "patent pixils" that match the Seek Imager
# this may be useful later, this code is not executed in the program
# but included to show how to find the "patent pixels"
def dots(self):
dotsF = numpy.zeros((156,208))
dotsI = dotsF.astype('uint8')
k = 10
for i in range(0,155,1):
for j in range(k,206,15):
# print i,j
dotsI[i,j] = 255
k = k - 4
if k < 0: k = k + 15
return dotsI
# display it to see if it matches the Seek black dot hex pattern
# zz = Image.fromstring("I", (208,156), dotsI, "raw", "I;8")
# toimage(zz).show()
# print dotsI
#####################################################################
def printIMG(self,img):
global Label1, Label2
j = img.min()
k = img.max()
Label1.configure( text="Img min %d" % j)
Label2.configure( text="Img max %d" % k)
def printCAL(self,cal):
global Label3, Label4
j = cal.min()
k = cal.max()
Label3.configure( text="Cal min %d" % j)
Label4.configure( text="Cal max %d" % k)
def printSUM(self,add):
global Label5, Label6
j = add.min()
k = add.max()
Label5.configure( text="Sum min %d" % j)
Label6.configure( text="Sum max %d" % k)
def read_frame(self,dev): # Send a read frame request
self.send_msg(dev,0x41, 0x53, 0, 0, '\xC0\x7E\x00\x00') # 0x53 = 83 Set Start Get Image Transfer
try:
data = dev.read(0x81, 0x3F60, 1000)
data += dev.read(0x81, 0x3F60, 1000)
data += dev.read(0x81, 0x3F60, 1000)
data += dev.read(0x81, 0x3F60, 1000)
except usb.USBError as e:
sys.exit()
return data
###################################
def add_207(self,imgF): # Add (really subtract) the data from the 207 row to each pixil
global scl2
# or not depending on the testing some of the following may be commented out.
# there are a different # of black dots in each row so the divisor
# needs to change for each row according to what is in the dot_numbers.txt file.
# this may not be the best way to do this. The code below does not do this now.
# need to try to use numpy or scipy to do this as it is a real hit on cpu useage.
# But doing it only for the cal image doesn't impact the real time images.
tuning = scl2.get() / 150.0
z = (.002 * imgF[:,206].mean())
z1 = z * tuning
# print tuning
# maxTune = ( imgF[:,206].max())
# minTune = ( imgF[:,206].min())
for i in range(0,156,1):
for j in range(0,205,1):
imgF[i,j] = imgF[i,j] - (.05 * imgF[i,j]/z) - imgF[i,206]/z1 # try scaled pixil and scaled pixil 207
# imgF[i,j] = imgF[i,j]
return
# for i in range(0,156,1):
# for j in range(0,205,1):
# imgF[i,j] = imgF[i,j] - (.05 * imgF[i,j]/z) - imgF[i,206]/z # try scaled pixil and scaled pixil 207
# return
####################################
def pal1(self):
global pal
pal = 'ironscale'
def pal2(self):
global pal
pal = 'whitehotscale'
def pal3(self):
global pal
pal = 'blackhotscale'
def pal4(self):
global pal
pal = 'greenredscale'
def snap(self):
global snapshot
snapshot = 1
# Main program starts here (you can tell I'm new to Python ;)
def initialize(self):
global dev, label, Label1, Label2, Label3, Label4, Label5, Label6
global scl, scl1, scl2
global calImage, calImagex, pal, snapshot
# Default palette is "iron"
pal = 'ironscale'
snapshot = 0
# Set up device
dev = self.usbinit()
self.camerainit(dev)
self.grid()
# Buttons for changing palettes
button1 = Tkinter.Button(self,text=u"Iron",command=self.pal1)
button1.grid(row=0,column=5)
button2 = Tkinter.Button(self,text=u"WhiteHot",command=self.pal2)
button2.grid(row=1,column=5)
button3 = Tkinter.Button(self,text=u"BlackHot",command=self.pal3)
button3.grid(row=2,column=5)
button4 = Tkinter.Button(self,text=u"GreenRed",command=self.pal4)
button4.grid(row=3,column=5)
button5 = Tkinter.Button(self,text=u"Snap!",command=self.snap)
button5.grid(row=4,column=5)
# Set up the label positions for the img, cal and sum data
Label1 = Tkinter.Label(self,text="Label1")
Label2 = Tkinter.Label(self,text="Label2")
Label3 = Tkinter.Label(self,text="Label3")
Label4 = Tkinter.Label(self,text="Label4")
Label5 = Tkinter.Label(self,text="Label5")
Label6 = Tkinter.Label(self,text="Label6")
Label1.grid(row=4,column=0,sticky='W') # img min
Label2.grid(row=5,column=0,sticky='W') # img max
Label3.grid(row=4,column=1,sticky='W') # cal min
Label4.grid(row=5,column=1,sticky='W') # cal max
Label5.grid(row=4,column=2,sticky='E') # sum min
Label6.grid(row=5,column=2,sticky='E') # sum max
# set up the position of the image
label = Tkinter.Label(self,text="your image here", compound="top")
label.grid(column=0,row=1,columnspan=3,rowspan=3,sticky='EW')
self.grid_columnconfigure(0,weight=1)
self.resizable(True,True)
# set up the position of the 2 sliders for the top & bottom ranges
scl = Tkinter.Scale(self, from_=0, to=255, length=200, orient=Tkinter.HORIZONTAL, label='Bottom Range')
scl.set(0)
scl.grid(row = 0, column=0,sticky='W')
scl1 = Tkinter.Scale(self, from_=0, to=255,length=200, orient=Tkinter.HORIZONTAL, label='Top Range')
scl1.set(64)
scl1.grid(row = 0, column=2)
scl2 = Tkinter.Scale(self, from_=100, to=300,length=200, orient=Tkinter.HORIZONTAL, label='Tuning')
scl2.set(200)
scl2.grid(row = 0, column=1)
# start iteration (or frame) count to 0
# this is printed out on the GUI so you can get a feel for how fast the program is running.
# maybe should implemt an FPS function like Fry-Kun did.
self.iteration=0
# get a cal image so the data isn't null if/when we miss the first one
self.get_cal_image(dev)
# update the image after 10 ms wait
self.UpdateImage(10)
# End of the initilization routine
# This is actually the main loop as it self-calls at the end
def UpdateImage(self, delay, event=None):
# this is merely so the display changes even though the image doesn't
global dev, status, calImage, ImageFinal, label
self.iteration += 1
self.image = self.get_image(dev)
ImageFinal = self.image
label.configure(image=ImageFinal, text="Frames captured %s" % self.iteration)
# reschedule to run again in 1 ms
self.after(delay, self.UpdateImage, 1)
# End of main loop
def get_cal_image(self,dev):
# Get the first cal image so calImage isn't null
global status, calImage, calImagex
status = 0
# Wait for the cal frame
while status != 1:
# 1 is a Calibration frame
# Read a raw frame
ret9 = self.read_frame(dev)
status = ret9[20]
status1 = ret9[80]
# print (status , status1)
# 6 is a pre-calibration frame (whatever that means)
# 4, 9, 8, 7, 5, 10 other... who knows.
# See http://www.eevblog.com/forum/testgear/yet-another-cheap-thermal-imager-incoming/msg545910/#msg545910
# for examples.
# Convert the raw 16 bit calibration data to a PIL Image
calimgI = Image.frombytes("F", (208,156), ret9, "raw", "F;16")
# save 16bit cal image for later
calImagex = Image.frombytes("I", (208,156), ret9, "raw", "I;16")
# Convert the PIL Image to an unsigned numpy float array
im2arr = numpy.asarray(calimgI)
# clamp values < 2000 to 2000
im2arr = numpy.where(im2arr < 2000, 2000, im2arr)
im2arrF = im2arr.astype('float')
calImage = im2arrF
return
def get_image(self,dev):
global calImage, calImagex, status, scl, scl1, pal, snapshot
status = 0
# Wait for the next image frame, ID = 3 is a Normal frame
while status != 3:
# Read a raw frame
ret9 = self.read_frame(dev)
status = ret9[20]
# check for a new cal frame, if so update the cal image
if status == 1:
# Convert the raw 16 bit calibration data to a PIL Image
calimgI = Image.frombytes("F", (208,156), ret9, "raw", "F;16")
# save cal 16bit image for later
calImagex = Image.frombytes("I", (208,156), ret9, "raw", "I;16")
# Convert the PIL Image to an unsigned numpy float array
im2arr = numpy.asarray(calimgI)
# Pixel 40 is a counter of some sort that starts at 0 and increments to 65535
# maybe an internal frame counter or clock.
status1 = im2arr[0,40]
# clamp values < 2000 to 2000
im2arr = numpy.where(im2arr < 2000, 2000, im2arr)
im2arrF = im2arr.astype('float')
# Clamp pixel 40 to 2000 so it doesn't cause havoc as it rises to 65535
im2arrF[0,40] = 2000
# Add the row 207 correction (maybe) >>Looks like it needs to be applied to just the cal frame<<
self.add_207(im2arrF)
# Zero out column 207
im2arrF[:,206] = numpy.zeros(156)
# Print the min max values for the calimage
self.printCAL(im2arrF)
# Save the calibration image
calImage = im2arrF
# If this is normal image data
# Convert the raw 16 bit thermal data to a PIL Image
imgx = Image.fromstring("F", (208,156), ret9, "raw", "F;16")
imgy = Image.fromstring("I", (208,156), ret9, "raw", "I;16")
# Convert the PIL Image to an unsigned numpy float array
im1arr = numpy.asarray(imgx)
# Pixel 40 is a counter of some sort that starts at 0 and increments to 65535
# maybe an internal frame counter or clock.
# status1 = im1arr[0,40]
# clamp values < 2000 to 2000
im1arr = numpy.where(im1arr < 2000, 2000, im1arr)
im1arrF = im1arr.astype('float')
# Clamp pixel 40 to 2000 so it doesn't cause havoc as it rises to 65535
im1arrF[0,40] = 2000
# Zero out column 207
im1arrF[:,206] = numpy.zeros(156)
# Print the min max values for the image
self.printIMG(im1arrF)
# Subtract the most recent calibration image from the offset image data
# With both the cal and image as floats, the offset doesn't matter and
# the following image conversion scales the result to display properly
additionF = (im1arrF) + 600 - (calImage)
# Try removing noise from the image, this works suprisingly well, but takes some cpu time
# It gets rid of bad pixels as well as the "Patent Pixils"
noiselessF = ndimage.median_filter(additionF, 3)
# don't bother to zero out column 207 as it contains no data
# can't see any difference on the image anyway.
# noiselessF[:,206] = numpy.zeros(156)
# Print the min max values for the calibrated/noise filtered image
self.printSUM(noiselessF)
# This will colorize the image, it works but it is a cpu hog
bottom = scl.get()
top = scl1.get()
display_min = bottom * 4
display_max = top * 16
image8 = noiselessF
image8.clip(display_min, display_max, out=image8)
image8 -= display_min
image8 //= (display_max - display_min + 1) / 256.
image8 = image8.astype(numpy.uint8)
noiselessI8= image8
conv = colorscale.GrayToRGB(palettes[pal])
cred = numpy.frompyfunc(conv.get_red, 1, 1)
cgreen = numpy.frompyfunc(conv.get_green, 1, 1)
cblue = numpy.frompyfunc(conv.get_blue, 1, 1)
# Convert to a PIL image sized to 640 x 480
color = numpy.dstack((cred(noiselessI8).astype(noiselessI8.dtype), cgreen(noiselessI8).astype(noiselessI8.dtype), cblue(noiselessI8).astype(noiselessI8.dtype)))
imgCC = Image.fromarray(color).resize((640, 480),Image.ANTIALIAS).transpose(3)
# If user has clicked Snap! then save the rawCal, rawData, and colorized image
# File names are hardcoded for now.
if snapshot == 1:
im1arry = numpy.asarray(imgy)
im1arrz = numpy.asarray(calImagex)
jj = Image.fromarray(im1arry)
jj.save('data/rawData.png')
jj = Image.fromarray(im1arrz)
jj.save('data/rawCal.png')
imgCC.save('data/CImage.png')
snapshot = 0
# Then convert the colorized image to a PhotoImage which auto scales when displayed by Tkinter
image = ImageTk.PhotoImage(imgCC)
return image
# The following palettes are supported, add more in colorscale.py
palettes = dict()
palettes['tillscale'] = colorscale.TillPalette()
palettes['gray1scale'] = colorscale.Gray1Palette()
palettes['redgreenscale'] = colorscale.RedGreenPalette()
palettes['greenredscale'] = colorscale.GreenRedPalette()
palettes['rain1scale'] = colorscale.Rain1Palette()
palettes['ironscale'] = colorscale.IronPalette()
palettes['blackhotscale'] = colorscale.BlackHotPalette()
palettes['whitehotscale'] = colorscale.WhiteHotPalette()
if __name__ == "__main__":
app=App(None)
app.title('Seek Thermal Imager')
app.mainloop()
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment