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holgerbrandl/shuffle_fasta.kts

Last active April 9, 2018 14:41
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shuffle_fasta.kts
@file:DependsOn("de.mpicbg.scicomp:kutils:0.10")
@file:KotlinOpts("-J-Xmx5g")
import de.mpicbg.scicomp.bioinfo.openFasta
import java.io.File
//val inputFasta = File("test.fasta")
val inputFasta = File(args[0])
openFasta(inputFasta).shuffled().forEach{ println(it.toEntryString())}
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