Hugues Fontenelle huguesfontenelle
huguesfontenelle
/ dynamic errorStrategy in nextflow
Created
June 16, 2016 13:05
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| ch = Channel.from(1) | |
| process rerun { | |
| echo true | |
| errorStrategy{task.attempt==1 ? 'retry' : 'ignore'} | |
| input: | |
| val(no) from ch | |
| script: |
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| #!/usr/bin/env nextflow | |
| output_path = new File('').getAbsolutePath() + '/data' | |
| filenames = Channel | |
| .from( "alpha", "beta" ) | |
| process dostuffs { | |
| storeDir output_path |