idoan

# method to calculate a k-mer's minimum number of appearance in a dna sequence
# from Bioinformatics Specialization on Coursera.
import operator as op
def ncr(n, r):
    r = min(r, n-r)
    if r == 0: return 1
    numer = reduce(op.mul, xrange(n, n-r, -1))
    denom = reduce(op.mul, xrange(1, r+1))
    return numer//denom

idoan

import sys
from LoadData import * 
from k_means import * 
from evaluation import * 
from kernel_k_means import * 
import matplotlib
import matplotlib.pyplot as plt
from mpl_toolkits.mplot3d import Axes3D

if __name__ == "__main__":