idot

#!/bin/bash
#echo "Creating an SSH key for you..."
#ssh-keygen -t rsa

#echo "Please add this public key to Github \n"
#echo "https://github.com/account/ssh \n"
#read -p "Press [Enter] key after this..."

XCODE=$(xcode-select -p 1>/dev/null;echo $?)
if [ $XCODE -ne 0 ]; then

idot

#!/usr/bin/env nextflow

//the problem is 1, then the channel gets file(*) => UnixPath; > 1, then channel gets ArrayList<UnixPath>

starts=Channel.from(1,2,3,4)

process first {
  input:
    val start from starts
  output:

idot

#!/usr/bin/env Rscript

#copy .metainfo and .chrnames.endsembl from orig tar.gz in subfolder and change
# chrnames, ID
#tar with tar -zcvf Tair10numeric.tar.gz Tair10numeric


convertRdata <- function(){
  id <- "Tair10numeric"
  dir.create(id, recursive=TRUE, show=FALSE )

idot

package scalaz.example


object Reader extends App {

  /**
   * Manual propagation of the environment (in the example, `contextRoot`.)
   */
  object Config0 {
    def fragment1(contextRoot: String) = <a href={contextRoot + "/foo"}>foo</a>

idot

import java.io.{ BufferedReader, File, FileReader }
import scalaz._, Scalaz._, effect.IO, iteratee.{ Iteratee => I, _ }

object IterateeIOExample {
  type ErrorOr[+A] = EitherT[IO, Throwable, A]

  def openFile(f: File) = IO(new BufferedReader(new FileReader(f)))
  def readLine(r: BufferedReader) = IO(Option(r.readLine))
  def closeReader(r: BufferedReader) = IO(r.close())

idot

library(gridExtra)

getLegend <- function(tp.gplot, position="bottom", box="horizontal"){
    tmp <- ggplot_gtable(ggplot_build(tp.gplot + theme(legend.position = position, legend.box = box)))
    leg <- which(sapply(tmp$grobs, function(x) x$name) == "guide-box")
    legend <- tmp$grobs[[leg]]
    return(legend)
}

#then extract height or width of legend

idot

//////////////////////////////////////
/// Grid Directive to Angular 1.0.2
//////////////////////////////////////

// To use:
//    <script>
//        var app = angular.module('myapp', ['ngGrid']);
//        var Ctrl = function($scope) { $scope.todos = [...] }
//    </script>
//    <div ng-app="myapp">

idot

import scala.collection.mutable.ListBuffer
import akka.actor.{Actor,ActorRef}
import akka.actor.Actor._
import akka.routing.{ Listeners, Listen }

//Represents a domain event
trait Event

//A builder to create domain entities
trait EntityBuilder[Entity] {

idot

#!/usr/bin/env python

def toIllu(c):
    """returns the 1.5 value of phred+33
    >>> [toIllu(ord(n)) for n in["!",'"',"#","$","H","I","J"]] 
    ['B', 'B', 'B', 'C', 'g', 'h', 'h']
    """
    if c < 36:
       return "B"
    elif c > 73:

idot

#!/usr/bin/env python
#
# Copyright (c) 2007, Hans Meine <hans_meine@gmx.net>
#  All rights reserved.
#
# This is licensed according to the new BSD license.
# Please send patches / comments, I would be happy about any feedback.
#
# Redistribution and use in source and binary forms, with or without
# modification, are permitted provided that the following conditions