Handy functions to quickly load locally stored HMD files -- get the zip from https://www.mortality.org/cgi-bin/hmd/hmd_download.php
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#=============================================================================== | |
# 2021-02-23 -- local hmd | |
# Function to read in a whole local HMD folder | |
# Ilya Kashnitsky, ilya.kashnitsky@gmail.com | |
#=============================================================================== | |
# a function to read ONE file | |
fread_hmd <- function(x) x %>% | |
data.table::fread(skip = 2, na.strings = ".") %>% | |
mutate(Age = Age %>% str_remove("\\+") %>% as.integer()) %>% | |
mutate_all(as.numeric) | |
# a function to read in the whole directory | |
fread_hmd_dir <- function(thedir) { | |
require(fs) | |
require(magrittr) | |
require(janitor) | |
suppressWarnings( | |
thedir %>% | |
dir_ls() %>% | |
map_df(fread_hmd, .id = "country") %>% | |
janitor::clean_names() %>% | |
mutate( | |
country = country %>% | |
str_remove(thedir %>% path_real()) %>% | |
str_remove("\\..*") %>% | |
str_remove("\\/"), | |
age = age %>% str_remove("\\+") %>% as.integer() | |
) | |
) | |
} |
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