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ilevantis/mfasta-sfasta awk command

Last active August 29, 2015 14:21
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Split a multi fasta from uniprot into sensibly named indidvual entry fasta files
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mfasta-sfasta awk command
awk 'BEGIN{ FS = "|"}/>/{FS = "|"; filename = substr($3,1,12) }{print $0 > "<output-dir-path>" filename ".fa"}' <multi-fasta-2bsplit>
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