Jaan Tollander de Balsch jaantollander

## make_docs.py
#!/usr/bin/env python
from livereload import Server, shell
package = "<package name>"
server = Server()
server.watch('docs/*.rst', shell('make html', cwd='docs'))
server.watch('docs/**/*.rst', shell('make html', cwd='docs'))
server.watch(f'{package}/**/*.py', shell('make html', cwd='docs'))
server.watch(f'{package}/*.py', shell('make html', cwd='docs'))
server.serve(root='docs/_build/html')

## conf.py
#!/usr/bin/env python3
# -*- coding: utf-8 -*-
"""
This file is execfile()d with the current directory set to its
containing dir.
Note that not all possible configuration values are present in this
autogenerated file.
All configuration values have a default; values that are commented out
serve to show the default.
requirements:

## lprof.py
"""How to use line profiler [1]_ programatically. Code adapted from [2]_.

.. [1] https://github.com/rkern/line_profiler
.. [2] https://nvbn.github.io/2017/05/29/complexity/
"""
from line_profiler import LineProfiler


def main(*args, **kwargs):
    """Function to be profiled"""

## patterns.py
# Pytest

def test_$NAME$():
    assert True$END$

# Traitlets

@default('$NAME$')
def _default_$NAME$(self):
    return $END$

## geometry.py
"""Convert shapely geometries to other objects

Other interfaces

- matplotlib: PathPatch
- pyqtgraph: PlotItem
- bokeh: Glyph
- scikit-image: Indices on a grid

References

## yield_from.py
def generator(): return range(10)

# Here f and g does the exactly same thing

# Generator delegation
def f():
    yield from generator()


# Legacy python syntax

## body.csv

          
            adult
            male
            female
            child
            eldery
            Unit
            explanation

            
              radius
              0.255
              0.27
              0.24
              0.21
              0.25
              m
              Total radius of the agent

            
              radius_scale
              0.035
              0.02
              0.02
              0.015
              0.02
              m
              Difference bound for total radius

            
              ratio_rt
              0.5882
              0.5926
              0.5833
              0.5714
              0.6
              1
              Ratio of total radius and radius torso

            
              ratio_rs
              0.3725
              0.3704
              0.375
              0.3333
              0.36
              1
              Ratio of total radius and radius shoulder

            
              ratio_ts
              0.6275
              0.6296
              0.625
              0.6667
              0.64
              1
              Ratio of total radius and distance from torso to shoulder

            
              velocity
              1.25
              1.35
              1.15
              0.9
              0.8
              m/s
              Walking speed of agent

            
              velocity_scale
              0.3
              0.2
              0.2
              0.3
              0.3
              m/s
              Difference bound for walking speed

            
              mass
              73.5
              80
              67
              57
              70
              kg
              Mass of an agent

            
              mass_scale
              8
              8
              6.7
              5.7
              7
              kg
              Standard deviation of mass of the agent

## format_numpy.py
def format_numpy(precision=5, threshold=6, edgeitems=3, linewidth=None,
                 suppress=False, nanstr=None, infstr=None, formatter=None):
    try:
        import numpy as np
        np.set_printoptions(precision, threshold, edgeitems, linewidth,
                            suppress, nanstr, infstr, formatter)
    except ImportError:
        return

## agent.csv

          
            name
            symbol
            value
            unit
            explanation
            source

            
              size
              :math:`N`
              
              
              Number of agents (N)

            
              shape
              :math:`(N, 2)`
              
              
              Shape for arrays

            
              three_circles_flag
              
              
              Boolean indicating if agent is modeled with three circle model

            
              orientable_flag
              
              
              Boolean indicating if agent is orientable

            
              active
              
              
              Boolean indicating if agent is active

            
              goal_reached
              
              
              Boolean indicating if goal is reahed

            
              mass
              :math:`m`
              
              kg
              Mass
              fds+evac

            
              radius
              :math:`r`
              
              m
              Radius
              fds+evac

            
              r_t
              :math:`r_t`
              
              m
              Radius of torso
              fds+evac

## compose.py
# Adapted from a comment from:
# https://mathieularose.com/function-composition-in-python/
import functools


def compose(*funcs):
    """Compose functions f, g, h, ... into ...(f(g(h(x))))

    Args:
        *funcs: Functions to be composed. Fuctions must take only one argument.
	#!/usr/bin/env python
	from livereload import Server, shell
	package = "<package name>"
	server = Server()
	server.watch('docs/*.rst', shell('make html', cwd='docs'))
	server.watch('docs/*/.rst', shell('make html', cwd='docs'))
	server.watch(f'{package}/*/.py', shell('make html', cwd='docs'))
	server.watch(f'{package}/*.py', shell('make html', cwd='docs'))
	server.serve(root='docs/_build/html')
	#!/usr/bin/env python3
	# -- coding: utf-8 --
	"""
	This file is execfile()d with the current directory set to its
	containing dir.
	Note that not all possible configuration values are present in this
	autogenerated file.
	All configuration values have a default; values that are commented out
	serve to show the default.
	requirements:
	"""How to use line profiler [1]_ programatically. Code adapted from [2]_.

	.. [1] https://github.com/rkern/line_profiler
	.. [2] https://nvbn.github.io/2017/05/29/complexity/
	"""
	from line_profiler import LineProfiler


	def main(args, *kwargs):
	"""Function to be profiled"""
	# Pytest

	def test_$NAME$():
	assert True$END$

	# Traitlets

	@default('$NAME$')
	def _default_$NAME$(self):
	return $END$
	"""Convert shapely geometries to other objects

	Other interfaces

	- matplotlib: PathPatch
	- pyqtgraph: PlotItem
	- bokeh: Glyph
	- scikit-image: Indices on a grid

	References
	def generator(): return range(10)

	# Here f and g does the exactly same thing

	# Generator delegation
	def f():
	yield from generator()


	# Legacy python syntax
	adult	male	female	child	eldery	Unit	explanation
radius	0.255	0.27	0.24	0.21	0.25	m	Total radius of the agent
radius_scale	0.035	0.02	0.02	0.015	0.02	m	Difference bound for total radius
ratio_rt	0.5882	0.5926	0.5833	0.5714	0.6	1	Ratio of total radius and radius torso
ratio_rs	0.3725	0.3704	0.375	0.3333	0.36	1	Ratio of total radius and radius shoulder
ratio_ts	0.6275	0.6296	0.625	0.6667	0.64	1	Ratio of total radius and distance from torso to shoulder
velocity	1.25	1.35	1.15	0.9	0.8	m/s	Walking speed of agent
velocity_scale	0.3	0.2	0.2	0.3	0.3	m/s	Difference bound for walking speed
mass	73.5	80	67	57	70	kg	Mass of an agent
mass_scale	8	8	6.7	5.7	7	kg	Standard deviation of mass of the agent
	def format_numpy(precision=5, threshold=6, edgeitems=3, linewidth=None,
	suppress=False, nanstr=None, infstr=None, formatter=None):
	try:
	import numpy as np
	np.set_printoptions(precision, threshold, edgeitems, linewidth,
	suppress, nanstr, infstr, formatter)
	except ImportError:
	return
name	symbol	value	unit	explanation	source
size	:math:`N`			Number of agents (N)
shape	:math:`(N, 2)`			Shape for arrays
three_circles_flag				Boolean indicating if agent is modeled with three circle model
orientable_flag				Boolean indicating if agent is orientable
active				Boolean indicating if agent is active
goal_reached				Boolean indicating if goal is reahed
mass	:math:`m`		kg	Mass	fds+evac
radius	:math:`r`		m	Radius	fds+evac
r_t	:math:`r_t`		m	Radius of torso	fds+evac
	# Adapted from a comment from:
	# https://mathieularose.com/function-composition-in-python/
	import functools


	def compose(*funcs):
	"""Compose functions f, g, h, ... into ...(f(g(h(x))))

	Args:
	*funcs: Functions to be composed. Fuctions must take only one argument.