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April 29, 2024 17:23
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| [2024-04-29 13:20:12,394] {setup_studies.py:94} INFO - Sample filtering is ON | |
| [2024-04-29 13:20:12,395] {setup_studies.py:96} WARNING - --datatypes or --limit-query-size was provided, resulting clinical sample file may be inaccurate | |
| [2024-04-29 13:20:13,543] {retry.py:351} DEBUG - Converted retries value: 3 -> Retry(total=3, connect=None, read=None, redirect=None, status=None) | |
| [2024-04-29 13:20:13,547] {requests.py:192} DEBUG - Making request: POST https://oauth2.googleapis.com/token | |
| [2024-04-29 13:20:13,548] {connectionpool.py:1014} DEBUG - Starting new HTTPS connection (1): oauth2.googleapis.com:443 | |
| [2024-04-29 13:20:13,906] {connectionpool.py:473} DEBUG - https://oauth2.googleapis.com:443 "POST /token HTTP/1.1" 200 None | |
| [2024-04-29 13:20:13,907] {connectionpool.py:1014} DEBUG - Starting new HTTPS connection (1): bigquery.googleapis.com:443 | |
| [2024-04-29 13:20:14,850] {connectionpool.py:473} DEBUG - https://bigquery.googleapis.com:443 "POST /upload/bigquery/v2/projects/isb-cgc-cbioportal/jobs?uploadType=multipart HTTP/1.1" 200 1503 | |
| [2024-04-29 13:20:14,851] {opentelemetry_tracing.py:66} DEBUG - This service is instrumented using OpenTelemetry. OpenTelemetry or one of its components could not be imported; please add compatible versions of opentelemetry-api and opentelemetry-instrumentation packages in order to get BigQuery Tracing data. | |
| [2024-04-29 13:20:14,952] {connectionpool.py:473} DEBUG - https://bigquery.googleapis.com:443 "GET /bigquery/v2/projects/isb-cgc-cbioportal/jobs/6b294f56-3fd8-4114-971e-10c47be8fa19?location=US&prettyPrint=false HTTP/1.1" 200 None | |
| [2024-04-29 13:20:14,952] {retry.py:227} DEBUG - Retrying due to , sleeping 0.0s ... | |
| [2024-04-29 13:20:15,128] {connectionpool.py:473} DEBUG - https://bigquery.googleapis.com:443 "GET /bigquery/v2/projects/isb-cgc-cbioportal/jobs/6b294f56-3fd8-4114-971e-10c47be8fa19?location=US&prettyPrint=false HTTP/1.1" 200 None | |
| [2024-04-29 13:20:15,128] {retry.py:227} DEBUG - Retrying due to , sleeping 0.1s ... | |
| [2024-04-29 13:20:15,352] {connectionpool.py:473} DEBUG - https://bigquery.googleapis.com:443 "GET /bigquery/v2/projects/isb-cgc-cbioportal/jobs/6b294f56-3fd8-4114-971e-10c47be8fa19?location=US&prettyPrint=false HTTP/1.1" 200 None | |
| [2024-04-29 13:20:15,354] {retry.py:227} DEBUG - Retrying due to , sleeping 0.7s ... | |
| [2024-04-29 13:20:16,149] {connectionpool.py:473} DEBUG - https://bigquery.googleapis.com:443 "GET /bigquery/v2/projects/isb-cgc-cbioportal/jobs/6b294f56-3fd8-4114-971e-10c47be8fa19?location=US&prettyPrint=false HTTP/1.1" 200 None | |
| [2024-04-29 13:20:16,151] {retry.py:227} DEBUG - Retrying due to , sleeping 2.4s ... | |
| [2024-04-29 13:20:18,709] {connectionpool.py:473} DEBUG - https://bigquery.googleapis.com:443 "GET /bigquery/v2/projects/isb-cgc-cbioportal/jobs/6b294f56-3fd8-4114-971e-10c47be8fa19?location=US&prettyPrint=false HTTP/1.1" 200 None | |
| [2024-04-29 13:20:18,710] {study_builder.py:47} DEBUG - Starting init_study | |
| [2024-04-29 13:20:18,710] {study_builder.py:706} DEBUG - Running SQL query: | |
| [2024-04-29 13:20:18,710] {study_builder.py:707} DEBUG - | |
| DROP TABLE IF EXISTS `isb-cgc-cbioportal.patient_cohorts.ccle_gdc`; | |
| CREATE TABLE `isb-cgc-cbioportal.patient_cohorts.ccle_gdc` | |
| AS ( | |
| SELECT DISTINCT CCLE_name AS case_barcode | |
| FROM `isb-cgc-bq.CCLE.sample_information_hg19_current` | |
| ORDER BY CCLE_name | |
| ); | |
| [2024-04-29 13:20:18,906] {connectionpool.py:473} DEBUG - https://bigquery.googleapis.com:443 "POST /bigquery/v2/projects/isb-cgc-cbioportal/jobs?prettyPrint=false HTTP/1.1" 200 None | |
| Query is running: 0%|[32m [0m|[2024-04-29 13:20:19,367] {connectionpool.py:473} DEBUG - https://bigquery.googleapis.com:443 "GET /bigquery/v2/projects/isb-cgc-cbioportal/queries/13ce1b39-fb5f-41b3-be1c-1f0c5f47a3c7?maxResults=0&timeoutMs=400&location=US&prettyPrint=false HTTP/1.1" 200 None | |
| [2024-04-29 13:20:19,488] {connectionpool.py:473} DEBUG - https://bigquery.googleapis.com:443 "GET /bigquery/v2/projects/isb-cgc-cbioportal/jobs/13ce1b39-fb5f-41b3-be1c-1f0c5f47a3c7?location=US&prettyPrint=false HTTP/1.1" 200 None | |
| [2024-04-29 13:20:19,859] {connectionpool.py:473} DEBUG - https://bigquery.googleapis.com:443 "GET /bigquery/v2/projects/isb-cgc-cbioportal/queries/13ce1b39-fb5f-41b3-be1c-1f0c5f47a3c7?maxResults=0&timeoutMs=400&location=US&prettyPrint=false HTTP/1.1" 200 None | |
| [2024-04-29 13:20:19,990] {connectionpool.py:473} DEBUG - https://bigquery.googleapis.com:443 "GET /bigquery/v2/projects/isb-cgc-cbioportal/jobs/13ce1b39-fb5f-41b3-be1c-1f0c5f47a3c7?location=US&prettyPrint=false HTTP/1.1" 200 None | |
| [2024-04-29 13:20:20,487] {connectionpool.py:473} DEBUG - https://bigquery.googleapis.com:443 "GET /bigquery/v2/projects/isb-cgc-cbioportal/queries/13ce1b39-fb5f-41b3-be1c-1f0c5f47a3c7?maxResults=0&timeoutMs=400&location=US&prettyPrint=false HTTP/1.1" 200 None | |
| [2024-04-29 13:20:20,600] {connectionpool.py:473} DEBUG - https://bigquery.googleapis.com:443 "GET /bigquery/v2/projects/isb-cgc-cbioportal/jobs/13ce1b39-fb5f-41b3-be1c-1f0c5f47a3c7?location=US&prettyPrint=false HTTP/1.1" 200 None | |
| [2024-04-29 13:20:21,002] {connectionpool.py:473} DEBUG - https://bigquery.googleapis.com:443 "GET /bigquery/v2/projects/isb-cgc-cbioportal/queries/13ce1b39-fb5f-41b3-be1c-1f0c5f47a3c7?maxResults=0&timeoutMs=400&location=US&prettyPrint=false HTTP/1.1" 200 None | |
| [2024-04-29 13:20:21,109] {connectionpool.py:473} DEBUG - https://bigquery.googleapis.com:443 "GET /bigquery/v2/projects/isb-cgc-cbioportal/jobs/13ce1b39-fb5f-41b3-be1c-1f0c5f47a3c7?location=US&prettyPrint=false HTTP/1.1" 200 None | |
| [2024-04-29 13:20:21,507] {connectionpool.py:473} DEBUG - https://bigquery.googleapis.com:443 "GET /bigquery/v2/projects/isb-cgc-cbioportal/queries/13ce1b39-fb5f-41b3-be1c-1f0c5f47a3c7?maxResults=0&timeoutMs=400&location=US&prettyPrint=false HTTP/1.1" 200 None | |
| [2024-04-29 13:20:21,604] {connectionpool.py:473} DEBUG - https://bigquery.googleapis.com:443 "GET /bigquery/v2/projects/isb-cgc-cbioportal/jobs/13ce1b39-fb5f-41b3-be1c-1f0c5f47a3c7?location=US&prettyPrint=false HTTP/1.1" 200 None | |
| [2024-04-29 13:20:21,999] {connectionpool.py:473} DEBUG - https://bigquery.googleapis.com:443 "GET /bigquery/v2/projects/isb-cgc-cbioportal/queries/13ce1b39-fb5f-41b3-be1c-1f0c5f47a3c7?maxResults=0&timeoutMs=400&location=US&prettyPrint=false HTTP/1.1" 200 None | |
| [2024-04-29 13:20:22,123] {connectionpool.py:473} DEBUG - https://bigquery.googleapis.com:443 "GET /bigquery/v2/projects/isb-cgc-cbioportal/jobs/13ce1b39-fb5f-41b3-be1c-1f0c5f47a3c7?location=US&prettyPrint=false HTTP/1.1" 200 None | |
| [2024-04-29 13:20:22,503] {connectionpool.py:473} DEBUG - https://bigquery.googleapis.com:443 "GET /bigquery/v2/projects/isb-cgc-cbioportal/queries/13ce1b39-fb5f-41b3-be1c-1f0c5f47a3c7?maxResults=0&timeoutMs=400&location=US&prettyPrint=false HTTP/1.1" 200 None | |
| [2024-04-29 13:20:22,598] {connectionpool.py:473} DEBUG - https://bigquery.googleapis.com:443 "GET /bigquery/v2/projects/isb-cgc-cbioportal/jobs/13ce1b39-fb5f-41b3-be1c-1f0c5f47a3c7?location=US&prettyPrint=false HTTP/1.1" 200 None | |
| [2024-04-29 13:20:23,019] {connectionpool.py:473} DEBUG - https://bigquery.googleapis.com:443 "GET /bigquery/v2/projects/isb-cgc-cbioportal/queries/13ce1b39-fb5f-41b3-be1c-1f0c5f47a3c7?maxResults=0&timeoutMs=400&location=US&prettyPrint=false HTTP/1.1" 200 None | |
| [2024-04-29 13:20:23,130] {connectionpool.py:473} DEBUG - https://bigquery.googleapis.com:443 "GET /bigquery/v2/projects/isb-cgc-cbioportal/jobs/13ce1b39-fb5f-41b3-be1c-1f0c5f47a3c7?location=US&prettyPrint=false HTTP/1.1" 200 None | |
| Query is running: 100%|[32m██████████[0m| | |
| Job ID 13ce1b39-fb5f-41b3-be1c-1f0c5f47a3c7 successfully executed: 100%|[32m██████████[0m| | |
| Job ID 13ce1b39-fb5f-41b3-be1c-1f0c5f47a3c7 successfully executed: 100%|[32m██████████[0m| | |
| [2024-04-29 13:20:23,132] {study_builder.py:716} DEBUG - Job statistics: | |
| [2024-04-29 13:20:23,132] {study_builder.py:717} DEBUG - Time created: 2024-04-29 17:20:18.842000+00:00 | |
| [2024-04-29 13:20:23,132] {study_builder.py:718} DEBUG - Time started: 2024-04-29 17:20:18.876000+00:00 | |
| [2024-04-29 13:20:23,132] {study_builder.py:719} DEBUG - Time ended: 2024-04-29 17:20:22.723000+00:00 | |
| [2024-04-29 13:20:23,132] {study_builder.py:720} DEBUG - Slot milliseconds: 687 | |
| [2024-04-29 13:20:23,132] {study_builder.py:721} DEBUG - Total bytes billed: 10485760 | |
| [2024-04-29 13:20:23,132] {study_builder.py:722} DEBUG - Total bytes processed: 20492 | |
| [2024-04-29 13:20:23,133] {study_builder.py:723} DEBUG - Result size (bytes): 140 | |
| [2024-04-29 13:20:23,133] {study_builder.py:706} DEBUG - Running SQL query: | |
| [2024-04-29 13:20:23,133] {study_builder.py:707} DEBUG - | |
| DROP TABLE IF EXISTS `isb-cgc-cbioportal.sample_cohorts.ccle_gdc`; | |
| CREATE TABLE `isb-cgc-cbioportal.sample_cohorts.ccle_gdc` | |
| AS ( | |
| SELECT DISTINCT CCLE_name AS sample_barcode | |
| FROM `isb-cgc-bq.CCLE.sample_information_hg19_current` | |
| ORDER BY CCLE_name | |
| ); | |
| [2024-04-29 13:20:23,317] {connectionpool.py:473} DEBUG - https://bigquery.googleapis.com:443 "POST /bigquery/v2/projects/isb-cgc-cbioportal/jobs?prettyPrint=false HTTP/1.1" 200 None | |
| Query is running: 0%|[32m [0m|[2024-04-29 13:20:23,677] {connectionpool.py:473} DEBUG - https://bigquery.googleapis.com:443 "GET /bigquery/v2/projects/isb-cgc-cbioportal/queries/00a81e6d-d4cd-44f0-8716-84af8973a282?maxResults=0&timeoutMs=400&location=US&prettyPrint=false HTTP/1.1" 200 None | |
| [2024-04-29 13:20:23,765] {connectionpool.py:473} DEBUG - https://bigquery.googleapis.com:443 "GET /bigquery/v2/projects/isb-cgc-cbioportal/jobs/00a81e6d-d4cd-44f0-8716-84af8973a282?location=US&prettyPrint=false HTTP/1.1" 200 None | |
| [2024-04-29 13:20:24,142] {connectionpool.py:473} DEBUG - https://bigquery.googleapis.com:443 "GET /bigquery/v2/projects/isb-cgc-cbioportal/queries/00a81e6d-d4cd-44f0-8716-84af8973a282?maxResults=0&timeoutMs=400&location=US&prettyPrint=false HTTP/1.1" 200 None | |
| [2024-04-29 13:20:24,260] {connectionpool.py:473} DEBUG - https://bigquery.googleapis.com:443 "GET /bigquery/v2/projects/isb-cgc-cbioportal/jobs/00a81e6d-d4cd-44f0-8716-84af8973a282?location=US&prettyPrint=false HTTP/1.1" 200 None | |
| [2024-04-29 13:20:24,678] {connectionpool.py:473} DEBUG - https://bigquery.googleapis.com:443 "GET /bigquery/v2/projects/isb-cgc-cbioportal/queries/00a81e6d-d4cd-44f0-8716-84af8973a282?maxResults=0&timeoutMs=400&location=US&prettyPrint=false HTTP/1.1" 200 None | |
| [2024-04-29 13:20:24,797] {connectionpool.py:473} DEBUG - https://bigquery.googleapis.com:443 "GET /bigquery/v2/projects/isb-cgc-cbioportal/jobs/00a81e6d-d4cd-44f0-8716-84af8973a282?location=US&prettyPrint=false HTTP/1.1" 200 None | |
| [2024-04-29 13:20:25,180] {connectionpool.py:473} DEBUG - https://bigquery.googleapis.com:443 "GET /bigquery/v2/projects/isb-cgc-cbioportal/queries/00a81e6d-d4cd-44f0-8716-84af8973a282?maxResults=0&timeoutMs=400&location=US&prettyPrint=false HTTP/1.1" 200 None | |
| [2024-04-29 13:20:25,323] {connectionpool.py:473} DEBUG - https://bigquery.googleapis.com:443 "GET /bigquery/v2/projects/isb-cgc-cbioportal/jobs/00a81e6d-d4cd-44f0-8716-84af8973a282?location=US&prettyPrint=false HTTP/1.1" 200 None | |
| [2024-04-29 13:20:25,800] {connectionpool.py:473} DEBUG - https://bigquery.googleapis.com:443 "GET /bigquery/v2/projects/isb-cgc-cbioportal/queries/00a81e6d-d4cd-44f0-8716-84af8973a282?maxResults=0&timeoutMs=400&location=US&prettyPrint=false HTTP/1.1" 200 None | |
| [2024-04-29 13:20:25,913] {connectionpool.py:473} DEBUG - https://bigquery.googleapis.com:443 "GET /bigquery/v2/projects/isb-cgc-cbioportal/jobs/00a81e6d-d4cd-44f0-8716-84af8973a282?location=US&prettyPrint=false HTTP/1.1" 200 None | |
| [2024-04-29 13:20:26,310] {connectionpool.py:473} DEBUG - https://bigquery.googleapis.com:443 "GET /bigquery/v2/projects/isb-cgc-cbioportal/queries/00a81e6d-d4cd-44f0-8716-84af8973a282?maxResults=0&timeoutMs=400&location=US&prettyPrint=false HTTP/1.1" 200 None | |
| [2024-04-29 13:20:26,441] {connectionpool.py:473} DEBUG - https://bigquery.googleapis.com:443 "GET /bigquery/v2/projects/isb-cgc-cbioportal/jobs/00a81e6d-d4cd-44f0-8716-84af8973a282?location=US&prettyPrint=false HTTP/1.1" 200 None | |
| [2024-04-29 13:20:26,790] {connectionpool.py:473} DEBUG - https://bigquery.googleapis.com:443 "GET /bigquery/v2/projects/isb-cgc-cbioportal/queries/00a81e6d-d4cd-44f0-8716-84af8973a282?maxResults=0&timeoutMs=400&location=US&prettyPrint=false HTTP/1.1" 200 None | |
| [2024-04-29 13:20:26,888] {connectionpool.py:473} DEBUG - https://bigquery.googleapis.com:443 "GET /bigquery/v2/projects/isb-cgc-cbioportal/jobs/00a81e6d-d4cd-44f0-8716-84af8973a282?location=US&prettyPrint=false HTTP/1.1" 200 None | |
| [2024-04-29 13:20:27,235] {connectionpool.py:473} DEBUG - https://bigquery.googleapis.com:443 "GET /bigquery/v2/projects/isb-cgc-cbioportal/queries/00a81e6d-d4cd-44f0-8716-84af8973a282?maxResults=0&timeoutMs=400&location=US&prettyPrint=false HTTP/1.1" 200 None | |
| [2024-04-29 13:20:27,326] {connectionpool.py:473} DEBUG - https://bigquery.googleapis.com:443 "GET /bigquery/v2/projects/isb-cgc-cbioportal/jobs/00a81e6d-d4cd-44f0-8716-84af8973a282?location=US&prettyPrint=false HTTP/1.1" 200 None | |
| [2024-04-29 13:20:27,705] {connectionpool.py:473} DEBUG - https://bigquery.googleapis.com:443 "GET /bigquery/v2/projects/isb-cgc-cbioportal/queries/00a81e6d-d4cd-44f0-8716-84af8973a282?maxResults=0&timeoutMs=400&location=US&prettyPrint=false HTTP/1.1" 200 None | |
| [2024-04-29 13:20:27,854] {connectionpool.py:473} DEBUG - https://bigquery.googleapis.com:443 "GET /bigquery/v2/projects/isb-cgc-cbioportal/jobs/00a81e6d-d4cd-44f0-8716-84af8973a282?location=US&prettyPrint=false HTTP/1.1" 200 None | |
| [2024-04-29 13:20:28,231] {connectionpool.py:473} DEBUG - https://bigquery.googleapis.com:443 "GET /bigquery/v2/projects/isb-cgc-cbioportal/queries/00a81e6d-d4cd-44f0-8716-84af8973a282?maxResults=0&timeoutMs=400&location=US&prettyPrint=false HTTP/1.1" 200 None | |
| [2024-04-29 13:20:28,340] {connectionpool.py:473} DEBUG - https://bigquery.googleapis.com:443 "GET /bigquery/v2/projects/isb-cgc-cbioportal/jobs/00a81e6d-d4cd-44f0-8716-84af8973a282?location=US&prettyPrint=false HTTP/1.1" 200 None | |
| [2024-04-29 13:20:28,444] {connectionpool.py:473} DEBUG - https://bigquery.googleapis.com:443 "GET /bigquery/v2/projects/isb-cgc-cbioportal/queries/00a81e6d-d4cd-44f0-8716-84af8973a282?maxResults=0&timeoutMs=400&location=US&prettyPrint=false HTTP/1.1" 200 None | |
| Query is running: 100%|[32m██████████[0m| | |
| Job ID 00a81e6d-d4cd-44f0-8716-84af8973a282 successfully executed: 100%|[32m██████████[0m| | |
| Job ID 00a81e6d-d4cd-44f0-8716-84af8973a282 successfully executed: 100%|[32m██████████[0m| | |
| [2024-04-29 13:20:28,448] {study_builder.py:716} DEBUG - Job statistics: | |
| [2024-04-29 13:20:28,448] {study_builder.py:717} DEBUG - Time created: 2024-04-29 17:20:23.247000+00:00 | |
| [2024-04-29 13:20:28,448] {study_builder.py:718} DEBUG - Time started: 2024-04-29 17:20:23.285000+00:00 | |
| [2024-04-29 13:20:28,449] {study_builder.py:719} DEBUG - Time ended: 2024-04-29 17:20:28.205000+00:00 | |
| [2024-04-29 13:20:28,449] {study_builder.py:720} DEBUG - Slot milliseconds: 1320 | |
| [2024-04-29 13:20:28,449] {study_builder.py:721} DEBUG - Total bytes billed: 10485760 | |
| [2024-04-29 13:20:28,449] {study_builder.py:722} DEBUG - Total bytes processed: 20492 | |
| [2024-04-29 13:20:28,450] {study_builder.py:723} DEBUG - Result size (bytes): 140 | |
| [2024-04-29 13:20:28,450] {study_builder.py:234} INFO - Initialized study ccle_gdc | |
| [2024-04-29 13:20:28,450] {study_builder.py:49} DEBUG - Finished init_study | |
| [2024-04-29 13:20:28,450] {study_builder.py:47} DEBUG - Starting write_readme | |
| [2024-04-29 13:20:28,463] {study_builder.py:49} DEBUG - Finished write_readme | |
| [2024-04-29 13:20:28,464] {study_builder.py:47} DEBUG - Starting write_study_meta_file | |
| [2024-04-29 13:20:28,465] {study_builder.py:49} DEBUG - Finished write_study_meta_file | |
| [2024-04-29 13:20:28,465] {study_builder.py:47} DEBUG - Starting write_clinical_patient_files | |
| [2024-04-29 13:20:28,466] {study_builder.py:757} INFO - Skipping clinical patient files | |
| [2024-04-29 13:20:28,466] {study_builder.py:49} DEBUG - Finished write_clinical_patient_files | |
| [2024-04-29 13:20:28,466] {study_builder.py:47} DEBUG - Starting write_clinical_sample_files | |
| [2024-04-29 13:20:28,466] {study_builder.py:773} INFO - Skipping clinical sample files | |
| [2024-04-29 13:20:28,466] {study_builder.py:49} DEBUG - Finished write_clinical_sample_files | |
| [2024-04-29 13:20:28,466] {study_builder.py:47} DEBUG - Starting write_cna_files | |
| [2024-04-29 13:20:28,466] {study_builder.py:800} INFO - Skipping CNA files | |
| [2024-04-29 13:20:28,466] {study_builder.py:49} DEBUG - Finished write_cna_files | |
| [2024-04-29 13:20:28,466] {study_builder.py:47} DEBUG - Starting write_mrna_files | |
| [2024-04-29 13:20:28,466] {study_builder.py:829} INFO - Skipping mRNA files | |
| [2024-04-29 13:20:28,466] {study_builder.py:49} DEBUG - Finished write_mrna_files | |
| [2024-04-29 13:20:28,466] {study_builder.py:47} DEBUG - Starting write_mrna_zscore_files | |
| [2024-04-29 13:20:28,466] {study_builder.py:847} INFO - Skipping mRNA z-score files | |
| [2024-04-29 13:20:28,466] {study_builder.py:49} DEBUG - Finished write_mrna_zscore_files | |
| [2024-04-29 13:20:28,466] {study_builder.py:47} DEBUG - Starting write_segment_files | |
| [2024-04-29 13:20:28,466] {study_builder.py:880} INFO - Skipping segment files | |
| [2024-04-29 13:20:28,466] {study_builder.py:49} DEBUG - Finished write_segment_files | |
| [2024-04-29 13:20:28,466] {study_builder.py:47} DEBUG - Starting write_mutation_files | |
| [2024-04-29 13:20:28,466] {study_builder.py:706} DEBUG - Running SQL query: | |
| [2024-04-29 13:20:28,466] {study_builder.py:707} DEBUG - | |
| SELECT Chromosome, Start_Position, End_Position, Reference_Allele, Genome_Change, CCLE_name AS Tumor_Sample_Barcode | |
| FROM `isb-cgc-bq.CCLE.somatic_mutation_hg19_current` | |
| ORDER BY Chromosome, Start_Position, End_Position, Tumor_Sample_Barcode | |
| [2024-04-29 13:20:28,913] {connectionpool.py:473} DEBUG - https://bigquery.googleapis.com:443 "POST /bigquery/v2/projects/isb-cgc-cbioportal/jobs?prettyPrint=false HTTP/1.1" 200 None | |
| Query is running: 0%|[32m [0m|[2024-04-29 13:20:29,207] {connectionpool.py:473} DEBUG - https://bigquery.googleapis.com:443 "GET /bigquery/v2/projects/isb-cgc-cbioportal/queries/cd09d41b-6e81-4bef-a8c5-0a5385e15817?maxResults=0&timeoutMs=400&location=US&prettyPrint=false HTTP/1.1" 200 None | |
| Query is running: 100%|[32m██████████[0m| | |
| Job ID cd09d41b-6e81-4bef-a8c5-0a5385e15817 successfully executed: 100%|[32m██████████[0m| | |
| Job ID cd09d41b-6e81-4bef-a8c5-0a5385e15817 successfully executed: 100%|[32m██████████[0m| | |
| Downloading: 0%|[32m [0m|[2024-04-29 13:20:31,781] {connectionpool.py:473} DEBUG - https://bigquery.googleapis.com:443 "GET /bigquery/v2/projects/isb-cgc-cbioportal/queries/cd09d41b-6e81-4bef-a8c5-0a5385e15817?fields=jobReference%2CtotalRows%2CpageToken%2Crows&location=US&formatOptions.useInt64Timestamp=True&prettyPrint=false HTTP/1.1" 200 None | |
| Downloading: 50%|[32m████▉ [0m|[2024-04-29 13:20:35,519] {connectionpool.py:473} DEBUG - https://bigquery.googleapis.com:443 "GET /bigquery/v2/projects/isb-cgc-cbioportal/queries/cd09d41b-6e81-4bef-a8c5-0a5385e15817?pageToken=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%3D&fields=jobReference%2CtotalRows%2CpageToken%2Crows&location=US&formatOptions.useInt64Timestamp=True&prettyPrint=false HTTP/1.1" 200 None | |
| Downloading: 100%|[32m█████████▉[0m|[2024-04-29 13:20:36,767] {connectionpool.py:473} DEBUG - https://bigquery.googleapis.com:443 "GET /bigquery/v2/projects/isb-cgc-cbioportal/queries/cd09d41b-6e81-4bef-a8c5-0a5385e15817?pageToken=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%3D&fields=jobReference%2CtotalRows%2CpageToken%2Crows&location=US&formatOptions.useInt64Timestamp=True&prettyPrint=false HTTP/1.1" 200 None | |
| Downloading: 100%|[32m██████████[0m| | |
| [2024-04-29 13:20:36,805] {study_builder.py:716} DEBUG - Job statistics: | |
| [2024-04-29 13:20:36,805] {study_builder.py:717} DEBUG - Time created: 2024-04-29 17:20:28.568000+00:00 | |
| [2024-04-29 13:20:36,805] {study_builder.py:718} DEBUG - Time started: 2024-04-29 17:20:28.774000+00:00 | |
| [2024-04-29 13:20:36,805] {study_builder.py:719} DEBUG - Time ended: 2024-04-29 17:20:28.893000+00:00 | |
| [2024-04-29 13:20:36,805] {study_builder.py:720} DEBUG - Slot milliseconds: None | |
| [2024-04-29 13:20:36,805] {study_builder.py:721} DEBUG - Total bytes billed: 0 | |
| [2024-04-29 13:20:36,805] {study_builder.py:722} DEBUG - Total bytes processed: 0 | |
| [2024-04-29 13:20:36,855] {study_builder.py:723} DEBUG - Result size (bytes): 34053400 | |
| [2024-04-29 13:20:37,023] {study_builder.py:49} DEBUG - Finished write_mutation_files | |
| [2024-04-29 13:20:37,023] {study_builder.py:47} DEBUG - Starting annotate_mutation_data | |
| [2024-04-29 13:20:37,023] {utils.py:281} DEBUG - Running external command: 'java -Dgenomenexus.base=https://www.genomenexus.org/ -jar ./external/genome-nexus-annotation-pipeline/annotationPipeline/target/annotationPipeline-*.jar --filename './generated_data/ccle_gdc/data_mutations.txt' --output-filename './generated_data/ccle_gdc/data_mutations.txt' --isoform-override mskcc --replace-symbol-entrez --post-interval-size 500' | |
| [2024-04-29 13:20:39,104] {utils.py:315} DEBUG - _____ _ _ | |
| [2024-04-29 13:20:39,146] {utils.py:315} DEBUG - / ____| | \ | | | |
| [2024-04-29 13:20:39,146] {utils.py:315} DEBUG - | | __ ___ _ __ ___ _ __ ___ ___ | \| | ___ __ __ _ _ ___ | |
| [2024-04-29 13:20:39,146] {utils.py:315} DEBUG - | | |_ | / _ \ | '_ \ / _ \ | '_ ` _ \ / _ \ | . ` | / _ \ \ \/ / | | | | / __| | |
| [2024-04-29 13:20:39,146] {utils.py:315} DEBUG - | |__| | | __/ | | | | | (_) | | | | | | | | __/ | |\ | | __/ > < | |_| | \__ \ | |
| [2024-04-29 13:20:39,146] {utils.py:315} DEBUG - \_____| \___| |_| |_| \___/ |_| |_| |_| \___| |_| \_| \___| /_/\_\ \__,_| |___/ | |
| [2024-04-29 13:20:39,146] {utils.py:315} DEBUG - | |
| [2024-04-29 13:20:39,146] {utils.py:315} DEBUG - | |
| [2024-04-29 13:20:39,146] {utils.py:315} DEBUG - 2024-04-29 13:20:39 [main] INFO org.cbioportal.annotation.AnnotationPipeline - Starting AnnotationPipeline v1.0.3-1-g0f4e72e-dirty-SNAPSHOT on LSKI4249 with PID 78095 (/Users/jko/Code/nci-crdc-pipeline/external/genome-nexus-annotation-pipeline/annotationPipeline/target/annotationPipeline-1.0.3-1-g0f4e72e-dirty-SNAPSHOT.jar started by jko in /Users/jko/Code/nci-crdc-pipeline) | |
| [2024-04-29 13:20:39,601] {utils.py:315} DEBUG - 2024-04-29 13:20:39 [main] INFO org.cbioportal.annotation.AnnotationPipeline - No active profile set, falling back to default profiles: default | |
| [2024-04-29 13:20:39,601] {utils.py:315} DEBUG - 2024-04-29 13:20:39 [main] WARN org.springframework.batch.core.listener.AbstractListenerFactoryBean - org.springframework.batch.item.ItemStreamReader is an interface. The implementing class will not be queried for annotation based listener configurations. If using @StepScope on a @Bean method, be sure to return the implementing class so listener annotations can be used. | |
| [2024-04-29 13:20:39,602] {utils.py:315} DEBUG - 2024-04-29 13:20:39 [main] WARN org.springframework.batch.core.listener.AbstractListenerFactoryBean - org.springframework.batch.item.ItemStreamWriter is an interface. The implementing class will not be queried for annotation based listener configurations. If using @StepScope on a @Bean method, be sure to return the implementing class so listener annotations can be used. | |
| [2024-04-29 13:20:39,625] {utils.py:315} DEBUG - 2024-04-29 13:20:39 [main] INFO com.zaxxer.hikari.HikariDataSource - HikariPool-1 - Starting... | |
| [2024-04-29 13:20:39,689] {utils.py:315} DEBUG - 2024-04-29 13:20:39 [main] INFO com.zaxxer.hikari.pool.PoolBase - HikariPool-1 - Driver does not support get/set network timeout for connections. (Receiver class org.h2.jdbc.JdbcConnection does not define or inherit an implementation of the resolved method 'abstract int getNetworkTimeout()' of interface java.sql.Connection.) | |
| [2024-04-29 13:20:39,693] {utils.py:315} DEBUG - 2024-04-29 13:20:39 [main] INFO com.zaxxer.hikari.HikariDataSource - HikariPool-1 - Start completed. | |
| [2024-04-29 13:20:39,742] {utils.py:315} DEBUG - 2024-04-29 13:20:39 [main] INFO org.springframework.batch.core.repository.support.JobRepositoryFactoryBean - No database type set, using meta data indicating: H2 | |
| [2024-04-29 13:20:39,753] {utils.py:315} DEBUG - 2024-04-29 13:20:39 [main] INFO org.springframework.batch.core.launch.support.SimpleJobLauncher - No TaskExecutor has been set, defaulting to synchronous executor. | |
| [2024-04-29 13:20:39,829] {utils.py:315} DEBUG - 2024-04-29 13:20:39 [main] INFO org.cbioportal.annotation.AnnotationPipeline - Started AnnotationPipeline in 2.541 seconds (JVM running for 2.778) | |
| [2024-04-29 13:20:39,855] {utils.py:315} DEBUG - 2024-04-29 13:20:39 [main] INFO org.springframework.batch.core.launch.support.SimpleJobLauncher - Job: [SimpleJob: [name=annotationJob]] launched with the following parameters: [{filename=./generated_data/ccle_gdc/data_mutations.txt, outputFilename=./generated_data/ccle_gdc/data_mutations.txt, outputFormat=null, replace=true, isoformOverride=mskcc, errorReportLocation=, postIntervalSize=500, stripMatchingBases=all, ignoreOriginalGenomicLocation=false, addOriginalGenomicLocation=false, noteColumn=true}] | |
| [2024-04-29 13:20:39,871] {utils.py:315} DEBUG - 2024-04-29 13:20:39 [main] INFO org.springframework.batch.core.job.SimpleStepHandler - Executing step: [step] | |
| [2024-04-29 13:20:40,090] {utils.py:315} DEBUG - 2024-04-29 13:20:40 [main] INFO org.cbioportal.annotation.pipeline.MutationRecordReader - Loading records from: ./generated_data/ccle_gdc/data_mutations.txt | |
| [2024-04-29 13:20:40,601] {utils.py:315} DEBUG - 2024-04-29 13:20:40 [main] INFO org.cbioportal.annotation.pipeline.MutationRecordReader - Loaded 116708 records from: ./generated_data/ccle_gdc/data_mutations.txt | |
| [2024-04-29 13:20:42,407] {utils.py:315} DEBUG - 2024-04-29 13:20:42 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.1140983_1140999delinsGGCTCCAGGGAGCAGAG;Error from VEP for: 1:g.1140983_1140999delinsGGCTCCAGGGAGCAGAG | |
| [2024-04-29 13:20:42,408] {utils.py:315} DEBUG - 2024-04-29 13:20:42 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.1147002C>C;Error from VEP for: 1:g.1147002C>C | |
| [2024-04-29 13:20:42,408] {utils.py:315} DEBUG - 2024-04-29 13:20:42 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.1147169C>C;Error from VEP for: 1:g.1147169C>C | |
| [2024-04-29 13:20:43,887] {utils.py:315} DEBUG - 2024-04-29 13:20:42 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.1147441G>G;Error from VEP for: 1:g.1147441G>G | |
| [2024-04-29 13:20:43,887] {utils.py:315} DEBUG - 2024-04-29 13:20:42 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.1168240G>G;Error from VEP for: 1:g.1168240G>G | |
| [2024-04-29 13:20:43,887] {utils.py:315} DEBUG - 2024-04-29 13:20:42 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.1177919T>T;Error from VEP for: 1:g.1177919T>T | |
| [2024-04-29 13:20:43,887] {utils.py:315} DEBUG - 2024-04-29 13:20:42 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.1273340A>A;Error from VEP for: 1:g.1273340A>A | |
| [2024-04-29 13:20:43,887] {utils.py:315} DEBUG - 2024-04-29 13:20:42 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.1273364_1273366delinsCTG;Error from VEP for: 1:g.1273364_1273366delinsCTG | |
| [2024-04-29 13:20:43,887] {utils.py:315} DEBUG - 2024-04-29 13:20:42 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.1277380G>G;Error from VEP for: 1:g.1277380G>G | |
| [2024-04-29 13:20:43,887] {utils.py:315} DEBUG - 2024-04-29 13:20:42 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.1477324_1477325delinsCA;Error from VEP for: 1:g.1477324_1477325delinsCA | |
| [2024-04-29 13:20:43,887] {utils.py:315} DEBUG - 2024-04-29 13:20:42 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.1479129_1479130delinsCT;Error from VEP for: 1:g.1479129_1479130delinsCT | |
| [2024-04-29 13:20:43,887] {utils.py:315} DEBUG - 2024-04-29 13:20:42 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.1577085_1577093delinsTCCTCCTCC;Error from VEP for: 1:g.1577085_1577093delinsTCCTCCTCC | |
| [2024-04-29 13:20:43,887] {utils.py:315} DEBUG - 2024-04-29 13:20:42 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.1654066_1654068delinsGCG;Error from VEP for: 1:g.1654066_1654068delinsGCG | |
| [2024-04-29 13:20:43,887] {utils.py:315} DEBUG - 2024-04-29 13:20:43 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.1654066_1654068delinsGCG;Error from VEP for: 1:g.1654066_1654068delinsGCG | |
| [2024-04-29 13:20:45,706] {utils.py:315} DEBUG - 2024-04-29 13:20:43 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.1654148T>T;Error from VEP for: 1:g.1654148T>T | |
| [2024-04-29 13:20:45,707] {utils.py:315} DEBUG - 2024-04-29 13:20:43 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.2116337C>C;Error from VEP for: 1:g.2116337C>C | |
| [2024-04-29 13:20:45,707] {utils.py:315} DEBUG - 2024-04-29 13:20:43 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.3102984C>C;Error from VEP for: 1:g.3102984C>C | |
| [2024-04-29 13:20:45,707] {utils.py:315} DEBUG - 2024-04-29 13:20:43 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.3644316G>G;Error from VEP for: 1:g.3644316G>G | |
| [2024-04-29 13:20:45,707] {utils.py:315} DEBUG - 2024-04-29 13:20:43 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.3782231_3782237delinsAGACCCG;Error from VEP for: 1:g.3782231_3782237delinsAGACCCG | |
| [2024-04-29 13:20:45,707] {utils.py:315} DEBUG - 2024-04-29 13:20:43 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.3782497_3782499delinsCCT;Error from VEP for: 1:g.3782497_3782499delinsCCT | |
| [2024-04-29 13:20:45,707] {utils.py:315} DEBUG - 2024-04-29 13:20:43 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.3800370_3800373delinsTTTT;Error from VEP for: 1:g.3800370_3800373delinsTTTT | |
| [2024-04-29 13:20:45,707] {utils.py:315} DEBUG - 2024-04-29 13:20:43 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.3800392T>T;Error from VEP for: 1:g.3800392T>T | |
| [2024-04-29 13:20:45,707] {utils.py:315} DEBUG - 2024-04-29 13:20:43 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.3800430A>A;Error from VEP for: 1:g.3800430A>A | |
| [2024-04-29 13:20:45,707] {utils.py:315} DEBUG - 2024-04-29 13:20:43 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.6246817C>C;Error from VEP for: 1:g.6246817C>C | |
| [2024-04-29 13:20:45,707] {utils.py:315} DEBUG - 2024-04-29 13:20:43 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.6253023_6253025delinsATC;Error from VEP for: 1:g.6253023_6253025delinsATC | |
| [2024-04-29 13:20:45,707] {utils.py:315} DEBUG - 2024-04-29 13:20:43 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.6257785T>T;Error from VEP for: 1:g.6257785T>T | |
| [2024-04-29 13:20:45,707] {utils.py:315} DEBUG - 2024-04-29 13:20:43 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.6257785_6257786delinsTT;Error from VEP for: 1:g.6257785_6257786delinsTT | |
| [2024-04-29 13:20:45,707] {utils.py:315} DEBUG - 2024-04-29 13:20:43 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.7980912_7980914delinsCTT;Error from VEP for: 1:g.7980912_7980914delinsCTT | |
| [2024-04-29 13:20:45,707] {utils.py:315} DEBUG - 2024-04-29 13:20:43 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.7998254T>T;Error from VEP for: 1:g.7998254T>T | |
| [2024-04-29 13:20:45,707] {utils.py:315} DEBUG - 2024-04-29 13:20:43 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.9778839G>G;Error from VEP for: 1:g.9778839G>G | |
| [2024-04-29 13:20:45,707] {utils.py:315} DEBUG - 2024-04-29 13:20:43 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.9778953_9778955delinsAAG;Error from VEP for: 1:g.9778953_9778955delinsAAG | |
| [2024-04-29 13:20:45,707] {utils.py:315} DEBUG - 2024-04-29 13:20:43 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.9780216C>C;Error from VEP for: 1:g.9780216C>C | |
| [2024-04-29 13:20:45,707] {utils.py:315} DEBUG - 2024-04-29 13:20:45 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.9782032G>G;Error from VEP for: 1:g.9782032G>G | |
| [2024-04-29 13:20:45,710] {utils.py:315} DEBUG - 2024-04-29 13:20:45 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.10521380A>A;Error from VEP for: 1:g.10521380A>A | |
| [2024-04-29 13:20:45,710] {utils.py:315} DEBUG - 2024-04-29 13:20:45 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.10521380_10521381delinsAA;Error from VEP for: 1:g.10521380_10521381delinsAA | |
| [2024-04-29 13:20:45,710] {utils.py:315} DEBUG - 2024-04-29 13:20:45 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.10523556_10523559delinsGACT;Error from VEP for: 1:g.10523556_10523559delinsGACT | |
| [2024-04-29 13:20:45,711] {utils.py:315} DEBUG - 2024-04-29 13:20:45 [main] INFO org.cbioportal.annotator.internal.GenomeNexusImpl - On record 500 out of 116708, annotation 0% complete | |
| [2024-04-29 13:20:45,711] {utils.py:315} DEBUG - 2024-04-29 13:20:45 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.15834394C>C;Error from VEP for: 1:g.15834394C>C | |
| [2024-04-29 13:20:45,711] {utils.py:315} DEBUG - 2024-04-29 13:20:45 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.16255142_16255143delinsGA;Error from VEP for: 1:g.16255142_16255143delinsGA | |
| [2024-04-29 13:20:45,711] {utils.py:315} DEBUG - 2024-04-29 13:20:45 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.16255883A>A;Error from VEP for: 1:g.16255883A>A | |
| [2024-04-29 13:20:45,711] {utils.py:315} DEBUG - 2024-04-29 13:20:45 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.16256165A>A;Error from VEP for: 1:g.16256165A>A | |
| [2024-04-29 13:20:45,711] {utils.py:315} DEBUG - 2024-04-29 13:20:45 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.16256372A>A;Error from VEP for: 1:g.16256372A>A | |
| [2024-04-29 13:20:45,711] {utils.py:315} DEBUG - 2024-04-29 13:20:45 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.16256610A>A;Error from VEP for: 1:g.16256610A>A | |
| [2024-04-29 13:20:45,711] {utils.py:315} DEBUG - 2024-04-29 13:20:45 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.16256833A>A;Error from VEP for: 1:g.16256833A>A | |
| [2024-04-29 13:20:45,711] {utils.py:315} DEBUG - 2024-04-29 13:20:45 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.16258889A>A;Error from VEP for: 1:g.16258889A>A | |
| [2024-04-29 13:20:45,711] {utils.py:315} DEBUG - 2024-04-29 13:20:45 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.16258944A>A;Error from VEP for: 1:g.16258944A>A | |
| [2024-04-29 13:20:45,711] {utils.py:315} DEBUG - 2024-04-29 13:20:45 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.16259043G>G;Error from VEP for: 1:g.16259043G>G | |
| [2024-04-29 13:20:45,711] {utils.py:315} DEBUG - 2024-04-29 13:20:45 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.16259480C>C;Error from VEP for: 1:g.16259480C>C | |
| [2024-04-29 13:20:45,711] {utils.py:315} DEBUG - 2024-04-29 13:20:45 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.16259648_16259650delinsAGC;Error from VEP for: 1:g.16259648_16259650delinsAGC | |
| [2024-04-29 13:20:45,711] {utils.py:315} DEBUG - 2024-04-29 13:20:45 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.16259828G>G;Error from VEP for: 1:g.16259828G>G | |
| [2024-04-29 13:20:49,466] {utils.py:315} DEBUG - 2024-04-29 13:20:45 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.16260558A>A;Error from VEP for: 1:g.16260558A>A | |
| [2024-04-29 13:20:49,466] {utils.py:315} DEBUG - 2024-04-29 13:20:45 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.16261409_16261410delinsAC;Error from VEP for: 1:g.16261409_16261410delinsAC | |
| [2024-04-29 13:20:49,466] {utils.py:315} DEBUG - 2024-04-29 13:20:45 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.16262091_16262093delinsCTC;Error from VEP for: 1:g.16262091_16262093delinsCTC | |
| [2024-04-29 13:20:49,466] {utils.py:315} DEBUG - 2024-04-29 13:20:45 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.16262460_16262465delinsCCCCCA;Error from VEP for: 1:g.16262460_16262465delinsCCCCCA | |
| [2024-04-29 13:20:49,466] {utils.py:315} DEBUG - 2024-04-29 13:20:45 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.16474972C>C;Error from VEP for: 1:g.16474972C>C | |
| [2024-04-29 13:20:49,466] {utils.py:315} DEBUG - 2024-04-29 13:20:45 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.16474977C>C;Error from VEP for: 1:g.16474977C>C | |
| [2024-04-29 13:20:49,466] {utils.py:315} DEBUG - 2024-04-29 13:20:45 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.17345435C>C;Error from VEP for: 1:g.17345435C>C | |
| [2024-04-29 13:20:49,467] {utils.py:315} DEBUG - 2024-04-29 13:20:45 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.18961629A>A;Error from VEP for: 1:g.18961629A>A | |
| [2024-04-29 13:20:49,467] {utils.py:315} DEBUG - 2024-04-29 13:20:45 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.19062532A>A;Error from VEP for: 1:g.19062532A>A | |
| [2024-04-29 13:20:49,467] {utils.py:315} DEBUG - 2024-04-29 13:20:45 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.20977307A>A;Error from VEP for: 1:g.20977307A>A | |
| [2024-04-29 13:20:49,467] {utils.py:315} DEBUG - 2024-04-29 13:20:45 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.22416588A>A;Error from VEP for: 1:g.22416588A>A | |
| [2024-04-29 13:20:49,467] {utils.py:315} DEBUG - 2024-04-29 13:20:45 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.22915892_22915895delinsTAAG;Error from VEP for: 1:g.22915892_22915895delinsTAAG | |
| [2024-04-29 13:20:49,467] {utils.py:315} DEBUG - 2024-04-29 13:20:49 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.23237042C>C;Error from VEP for: 1:g.23237042C>C | |
| [2024-04-29 13:20:49,467] {utils.py:315} DEBUG - 2024-04-29 13:20:49 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.26449196T>T;Error from VEP for: 1:g.26449196T>T | |
| [2024-04-29 13:20:49,467] {utils.py:315} DEBUG - 2024-04-29 13:20:49 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.26449336_26449337delinsAA;Error from VEP for: 1:g.26449336_26449337delinsAA | |
| [2024-04-29 13:20:49,467] {utils.py:315} DEBUG - 2024-04-29 13:20:49 [main] INFO org.cbioportal.annotator.internal.GenomeNexusImpl - On record 1000 out of 116708, annotation 0% complete | |
| [2024-04-29 13:20:49,467] {utils.py:315} DEBUG - 2024-04-29 13:20:49 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.27023451_27023464delinsGCGGCGGCGGCGGG;Error from VEP for: 1:g.27023451_27023464delinsGCGGCGGCGGCGGG | |
| [2024-04-29 13:20:49,467] {utils.py:315} DEBUG - 2024-04-29 13:20:49 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.27023716G>G;Error from VEP for: 1:g.27023716G>G | |
| [2024-04-29 13:20:49,467] {utils.py:315} DEBUG - 2024-04-29 13:20:49 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.27023744G>G;Error from VEP for: 1:g.27023744G>G | |
| [2024-04-29 13:20:49,467] {utils.py:315} DEBUG - 2024-04-29 13:20:49 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.27056080_27056081delinsTA;Error from VEP for: 1:g.27056080_27056081delinsTA | |
| [2024-04-29 13:20:49,467] {utils.py:315} DEBUG - 2024-04-29 13:20:49 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.27057967_27057968delinsCC;Error from VEP for: 1:g.27057967_27057968delinsCC | |
| [2024-04-29 13:20:49,467] {utils.py:315} DEBUG - 2024-04-29 13:20:49 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.27058045_27058047delinsCAG;Error from VEP for: 1:g.27058045_27058047delinsCAG | |
| [2024-04-29 13:20:49,467] {utils.py:315} DEBUG - 2024-04-29 13:20:49 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.27058064C>C;Error from VEP for: 1:g.27058064C>C | |
| [2024-04-29 13:20:49,467] {utils.py:315} DEBUG - 2024-04-29 13:20:49 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.27059284_27059287delinsGTGA;Error from VEP for: 1:g.27059284_27059287delinsGTGA | |
| [2024-04-29 13:20:49,467] {utils.py:315} DEBUG - 2024-04-29 13:20:49 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.27087373C>C;Error from VEP for: 1:g.27087373C>C | |
| [2024-04-29 13:20:49,467] {utils.py:315} DEBUG - 2024-04-29 13:20:49 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.27088659C>C;Error from VEP for: 1:g.27088659C>C | |
| [2024-04-29 13:20:49,467] {utils.py:315} DEBUG - 2024-04-29 13:20:49 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.27088682C>C;Error from VEP for: 1:g.27088682C>C | |
| [2024-04-29 13:20:49,467] {utils.py:315} DEBUG - 2024-04-29 13:20:49 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.27089496T>T;Error from VEP for: 1:g.27089496T>T | |
| [2024-04-29 13:20:49,467] {utils.py:315} DEBUG - 2024-04-29 13:20:49 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.27097622A>A;Error from VEP for: 1:g.27097622A>A | |
| [2024-04-29 13:20:49,467] {utils.py:315} DEBUG - 2024-04-29 13:20:49 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.27097688A>A;Error from VEP for: 1:g.27097688A>A | |
| [2024-04-29 13:20:49,467] {utils.py:315} DEBUG - 2024-04-29 13:20:49 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.27097708_27097709delinsTC;Error from VEP for: 1:g.27097708_27097709delinsTC | |
| [2024-04-29 13:20:49,467] {utils.py:315} DEBUG - 2024-04-29 13:20:49 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.27097751C>C;Error from VEP for: 1:g.27097751C>C | |
| [2024-04-29 13:20:49,467] {utils.py:315} DEBUG - 2024-04-29 13:20:49 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.27097801C>C;Error from VEP for: 1:g.27097801C>C | |
| [2024-04-29 13:20:49,467] {utils.py:315} DEBUG - 2024-04-29 13:20:49 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.27099103C>C;Error from VEP for: 1:g.27099103C>C | |
| [2024-04-29 13:20:49,467] {utils.py:315} DEBUG - 2024-04-29 13:20:49 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.27099874C>C;Error from VEP for: 1:g.27099874C>C | |
| [2024-04-29 13:20:49,467] {utils.py:315} DEBUG - 2024-04-29 13:20:49 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.27100176C>C;Error from VEP for: 1:g.27100176C>C | |
| [2024-04-29 13:20:49,467] {utils.py:315} DEBUG - 2024-04-29 13:20:49 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.27101117C>C;Error from VEP for: 1:g.27101117C>C | |
| [2024-04-29 13:20:49,467] {utils.py:315} DEBUG - 2024-04-29 13:20:49 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.27101259C>C;Error from VEP for: 1:g.27101259C>C | |
| [2024-04-29 13:20:49,467] {utils.py:315} DEBUG - 2024-04-29 13:20:49 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.27101268C>C;Error from VEP for: 1:g.27101268C>C | |
| [2024-04-29 13:20:49,467] {utils.py:315} DEBUG - 2024-04-29 13:20:49 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.27101402C>C;Error from VEP for: 1:g.27101402C>C | |
| [2024-04-29 13:20:49,467] {utils.py:315} DEBUG - 2024-04-29 13:20:49 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.27105549C>C;Error from VEP for: 1:g.27105549C>C | |
| [2024-04-29 13:20:49,467] {utils.py:315} DEBUG - 2024-04-29 13:20:49 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.27105551G>G;Error from VEP for: 1:g.27105551G>G | |
| [2024-04-29 13:20:51,670] {utils.py:315} DEBUG - 2024-04-29 13:20:49 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.27105931G>G;Error from VEP for: 1:g.27105931G>G | |
| [2024-04-29 13:20:51,670] {utils.py:315} DEBUG - 2024-04-29 13:20:49 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.27106010_27106017delinsGCCCACCA;Error from VEP for: 1:g.27106010_27106017delinsGCCCACCA | |
| [2024-04-29 13:20:51,670] {utils.py:315} DEBUG - 2024-04-29 13:20:49 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.27106100A>A;Error from VEP for: 1:g.27106100A>A | |
| [2024-04-29 13:20:51,670] {utils.py:315} DEBUG - 2024-04-29 13:20:49 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.27106630_27106633delinsTGCC;Error from VEP for: 1:g.27106630_27106633delinsTGCC | |
| [2024-04-29 13:20:51,670] {utils.py:315} DEBUG - 2024-04-29 13:20:49 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.27106789_27106794delinsCTGATT;Error from VEP for: 1:g.27106789_27106794delinsCTGATT | |
| [2024-04-29 13:20:51,670] {utils.py:315} DEBUG - 2024-04-29 13:20:49 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.27106804C>C;Error from VEP for: 1:g.27106804C>C | |
| [2024-04-29 13:20:51,670] {utils.py:315} DEBUG - 2024-04-29 13:20:49 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.27107264C>C;Error from VEP for: 1:g.27107264C>C | |
| [2024-04-29 13:20:51,670] {utils.py:315} DEBUG - 2024-04-29 13:20:49 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.27107398_27107399delinsTC;Error from VEP for: 1:g.27107398_27107399delinsTC | |
| [2024-04-29 13:20:51,670] {utils.py:315} DEBUG - 2024-04-29 13:20:49 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.27683230_27683232delinsCTT;Error from VEP for: 1:g.27683230_27683232delinsCTT | |
| [2024-04-29 13:20:51,670] {utils.py:315} DEBUG - 2024-04-29 13:20:49 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.27685239G>G;Error from VEP for: 1:g.27685239G>G | |
| [2024-04-29 13:20:51,670] {utils.py:315} DEBUG - 2024-04-29 13:20:49 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.27687423C>C;Error from VEP for: 1:g.27687423C>C | |
| [2024-04-29 13:20:51,670] {utils.py:315} DEBUG - 2024-04-29 13:20:51 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.32741225G>G;Error from VEP for: 1:g.32741225G>G | |
| [2024-04-29 13:20:52,920] {utils.py:315} DEBUG - 2024-04-29 13:20:51 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.32745227C>C;Error from VEP for: 1:g.32745227C>C | |
| [2024-04-29 13:20:52,920] {utils.py:315} DEBUG - 2024-04-29 13:20:51 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.32797831_32797833delinsGAG;Error from VEP for: 1:g.32797831_32797833delinsGAG | |
| [2024-04-29 13:20:52,920] {utils.py:315} DEBUG - 2024-04-29 13:20:51 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.32798326_32798328delinsAGG;Error from VEP for: 1:g.32798326_32798328delinsAGG | |
| [2024-04-29 13:20:52,920] {utils.py:315} DEBUG - 2024-04-29 13:20:51 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.32828157_32828160delinsCAGA;Error from VEP for: 1:g.32828157_32828160delinsCAGA | |
| [2024-04-29 13:20:52,920] {utils.py:315} DEBUG - 2024-04-29 13:20:51 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.32828162_32828163delinsAG;Error from VEP for: 1:g.32828162_32828163delinsAG | |
| [2024-04-29 13:20:52,920] {utils.py:315} DEBUG - 2024-04-29 13:20:51 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.32828180G>G;Error from VEP for: 1:g.32828180G>G | |
| [2024-04-29 13:20:52,920] {utils.py:315} DEBUG - 2024-04-29 13:20:51 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.32828364_32828368delinsACTCA;Error from VEP for: 1:g.32828364_32828368delinsACTCA | |
| [2024-04-29 13:20:52,920] {utils.py:315} DEBUG - 2024-04-29 13:20:51 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.32829677T>T;Error from VEP for: 1:g.32829677T>T | |
| [2024-04-29 13:20:52,920] {utils.py:315} DEBUG - 2024-04-29 13:20:51 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.32829722G>G;Error from VEP for: 1:g.32829722G>G | |
| [2024-04-29 13:20:52,920] {utils.py:315} DEBUG - 2024-04-29 13:20:51 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.35649936A>A;Error from VEP for: 1:g.35649936A>A | |
| [2024-04-29 13:20:52,920] {utils.py:315} DEBUG - 2024-04-29 13:20:51 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.35650019_35650022delinsAAAC;Error from VEP for: 1:g.35650019_35650022delinsAAAC | |
| [2024-04-29 13:20:52,920] {utils.py:315} DEBUG - 2024-04-29 13:20:51 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.35650023_35650026delinsAAAA;Error from VEP for: 1:g.35650023_35650026delinsAAAA | |
| [2024-04-29 13:20:52,920] {utils.py:315} DEBUG - 2024-04-29 13:20:51 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.36809835_36809836delinsAT;Error from VEP for: 1:g.36809835_36809836delinsAT | |
| [2024-04-29 13:20:52,920] {utils.py:315} DEBUG - 2024-04-29 13:20:51 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.38184441_38184443delinsAAG;Error from VEP for: 1:g.38184441_38184443delinsAAG | |
| [2024-04-29 13:20:52,920] {utils.py:315} DEBUG - 2024-04-29 13:20:51 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.38186060C>C;Error from VEP for: 1:g.38186060C>C | |
| [2024-04-29 13:20:52,920] {utils.py:315} DEBUG - 2024-04-29 13:20:51 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.38200950G>G;Error from VEP for: 1:g.38200950G>G | |
| [2024-04-29 13:20:52,920] {utils.py:315} DEBUG - 2024-04-29 13:20:51 [main] INFO org.cbioportal.annotator.internal.GenomeNexusImpl - On record 1500 out of 116708, annotation 1% complete | |
| [2024-04-29 13:20:52,920] {utils.py:315} DEBUG - 2024-04-29 13:20:51 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.40435515T>T;Error from VEP for: 1:g.40435515T>T | |
| [2024-04-29 13:20:52,920] {utils.py:315} DEBUG - 2024-04-29 13:20:51 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.43778141C>C;Error from VEP for: 1:g.43778141C>C | |
| [2024-04-29 13:20:52,920] {utils.py:315} DEBUG - 2024-04-29 13:20:51 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.43778263C>C;Error from VEP for: 1:g.43778263C>C | |
| [2024-04-29 13:20:52,920] {utils.py:315} DEBUG - 2024-04-29 13:20:51 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.43779725_43779726delinsTG;Error from VEP for: 1:g.43779725_43779726delinsTG | |
| [2024-04-29 13:20:52,920] {utils.py:315} DEBUG - 2024-04-29 13:20:51 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.43787333C>C;Error from VEP for: 1:g.43787333C>C | |
| [2024-04-29 13:20:52,920] {utils.py:315} DEBUG - 2024-04-29 13:20:51 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.43804365_43804378delinsAGCGAGTCCTCTTT;Error from VEP for: 1:g.43804365_43804378delinsAGCGAGTCCTCTTT | |
| [2024-04-29 13:20:52,920] {utils.py:315} DEBUG - 2024-04-29 13:20:51 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.43818248C>C;Error from VEP for: 1:g.43818248C>C | |
| [2024-04-29 13:20:52,921] {utils.py:315} DEBUG - 2024-04-29 13:20:51 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.45266761T>T;Error from VEP for: 1:g.45266761T>T | |
| [2024-04-29 13:20:52,921] {utils.py:315} DEBUG - 2024-04-29 13:20:51 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.45267606_45267612delinsTGAGTTT;Error from VEP for: 1:g.45267606_45267612delinsTGAGTTT | |
| [2024-04-29 13:20:52,921] {utils.py:315} DEBUG - 2024-04-29 13:20:51 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.45268997C>C;Error from VEP for: 1:g.45268997C>C | |
| [2024-04-29 13:20:52,921] {utils.py:315} DEBUG - 2024-04-29 13:20:51 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.45270026C>C;Error from VEP for: 1:g.45270026C>C | |
| [2024-04-29 13:20:52,921] {utils.py:315} DEBUG - 2024-04-29 13:20:51 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.45288989G>G;Error from VEP for: 1:g.45288989G>G | |
| [2024-04-29 13:20:52,921] {utils.py:315} DEBUG - 2024-04-29 13:20:51 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.45292627G>G;Error from VEP for: 1:g.45292627G>G | |
| [2024-04-29 13:20:52,921] {utils.py:315} DEBUG - 2024-04-29 13:20:51 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.45293620_45293622delinsCTC;Error from VEP for: 1:g.45293620_45293622delinsCTC | |
| [2024-04-29 13:20:52,921] {utils.py:315} DEBUG - 2024-04-29 13:20:52 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.45794921A>A;Error from VEP for: 1:g.45794921A>A | |
| [2024-04-29 13:20:53,783] {utils.py:315} DEBUG - 2024-04-29 13:20:52 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.45794939_45794941delinsAAC;Error from VEP for: 1:g.45794939_45794941delinsAAC | |
| [2024-04-29 13:20:53,783] {utils.py:315} DEBUG - 2024-04-29 13:20:52 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.45923480_45923484delinsTTCTT;Error from VEP for: 1:g.45923480_45923484delinsTTCTT | |
| [2024-04-29 13:20:53,783] {utils.py:315} DEBUG - 2024-04-29 13:20:52 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.46463406T>T;Error from VEP for: 1:g.46463406T>T | |
| [2024-04-29 13:20:53,783] {utils.py:315} DEBUG - 2024-04-29 13:20:52 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.46476453C>C;Error from VEP for: 1:g.46476453C>C | |
| [2024-04-29 13:20:53,783] {utils.py:315} DEBUG - 2024-04-29 13:20:52 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.46494559T>T;Error from VEP for: 1:g.46494559T>T | |
| [2024-04-29 13:20:53,783] {utils.py:315} DEBUG - 2024-04-29 13:20:52 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.46495173C>C;Error from VEP for: 1:g.46495173C>C | |
| [2024-04-29 13:20:53,783] {utils.py:315} DEBUG - 2024-04-29 13:20:52 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.46499885C>C;Error from VEP for: 1:g.46499885C>C | |
| [2024-04-29 13:20:53,783] {utils.py:315} DEBUG - 2024-04-29 13:20:52 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.47689726T>T;Error from VEP for: 1:g.47689726T>T | |
| [2024-04-29 13:20:53,783] {utils.py:315} DEBUG - 2024-04-29 13:20:52 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.47717309T>T;Error from VEP for: 1:g.47717309T>T | |
| [2024-04-29 13:20:53,783] {utils.py:315} DEBUG - 2024-04-29 13:20:52 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.47728681C>C;Error from VEP for: 1:g.47728681C>C | |
| [2024-04-29 13:20:53,783] {utils.py:315} DEBUG - 2024-04-29 13:20:52 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.51435990A>A;Error from VEP for: 1:g.51435990A>A | |
| [2024-04-29 13:20:53,783] {utils.py:315} DEBUG - 2024-04-29 13:20:52 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.51436102_51436103delinsTT;Error from VEP for: 1:g.51436102_51436103delinsTT | |
| [2024-04-29 13:20:53,783] {utils.py:315} DEBUG - 2024-04-29 13:20:52 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.51822189A>A;Error from VEP for: 1:g.51822189A>A | |
| [2024-04-29 13:20:53,783] {utils.py:315} DEBUG - 2024-04-29 13:20:52 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.51822189_51822191delinsAAA;Error from VEP for: 1:g.51822189_51822191delinsAAA | |
| [2024-04-29 13:20:53,783] {utils.py:315} DEBUG - 2024-04-29 13:20:52 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.51822220A>A;Error from VEP for: 1:g.51822220A>A | |
| [2024-04-29 13:20:53,783] {utils.py:315} DEBUG - 2024-04-29 13:20:52 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.51822220_51822221delinsAA;Error from VEP for: 1:g.51822220_51822221delinsAA | |
| [2024-04-29 13:20:53,783] {utils.py:315} DEBUG - 2024-04-29 13:20:52 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.51822362_51822363delinsAG;Error from VEP for: 1:g.51822362_51822363delinsAG | |
| [2024-04-29 13:20:53,783] {utils.py:315} DEBUG - 2024-04-29 13:20:52 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.51829633T>T;Error from VEP for: 1:g.51829633T>T | |
| [2024-04-29 13:20:53,783] {utils.py:315} DEBUG - 2024-04-29 13:20:52 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.51887719A>A;Error from VEP for: 1:g.51887719A>A | |
| [2024-04-29 13:20:53,783] {utils.py:315} DEBUG - 2024-04-29 13:20:52 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.52729611T>T;Error from VEP for: 1:g.52729611T>T | |
| [2024-04-29 13:20:53,783] {utils.py:315} DEBUG - 2024-04-29 13:20:52 [main] INFO org.cbioportal.annotator.internal.GenomeNexusImpl - On record 2000 out of 116708, annotation 1% complete | |
| [2024-04-29 13:20:53,783] {utils.py:315} DEBUG - 2024-04-29 13:20:52 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.52759261G>G;Error from VEP for: 1:g.52759261G>G | |
| [2024-04-29 13:20:53,783] {utils.py:315} DEBUG - 2024-04-29 13:20:52 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.52803517_52803519delinsCAC;Error from VEP for: 1:g.52803517_52803519delinsCAC | |
| [2024-04-29 13:20:53,783] {utils.py:315} DEBUG - 2024-04-29 13:20:52 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.52811909T>T;Error from VEP for: 1:g.52811909T>T | |
| [2024-04-29 13:20:53,783] {utils.py:315} DEBUG - 2024-04-29 13:20:52 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.57157094T>T;Error from VEP for: 1:g.57157094T>T | |
| [2024-04-29 13:20:53,783] {utils.py:315} DEBUG - 2024-04-29 13:20:53 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.57491693A>A;Error from VEP for: 1:g.57491693A>A | |
| [2024-04-29 13:20:54,653] {utils.py:315} DEBUG - 2024-04-29 13:20:53 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.59247653T>T;Error from VEP for: 1:g.59247653T>T | |
| [2024-04-29 13:20:54,653] {utils.py:315} DEBUG - 2024-04-29 13:20:53 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.59247706T>T;Error from VEP for: 1:g.59247706T>T | |
| [2024-04-29 13:20:54,653] {utils.py:315} DEBUG - 2024-04-29 13:20:53 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.59247730C>C;Error from VEP for: 1:g.59247730C>C | |
| [2024-04-29 13:20:54,653] {utils.py:315} DEBUG - 2024-04-29 13:20:53 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.61553917A>A;Error from VEP for: 1:g.61553917A>A | |
| [2024-04-29 13:20:54,653] {utils.py:315} DEBUG - 2024-04-29 13:20:53 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.61921186T>T;Error from VEP for: 1:g.61921186T>T | |
| [2024-04-29 13:20:54,653] {utils.py:315} DEBUG - 2024-04-29 13:20:53 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.61921186_61921187delinsTT;Error from VEP for: 1:g.61921186_61921187delinsTT | |
| [2024-04-29 13:20:54,653] {utils.py:315} DEBUG - 2024-04-29 13:20:53 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.61921198_61921199delinsTA;Error from VEP for: 1:g.61921198_61921199delinsTA | |
| [2024-04-29 13:20:54,653] {utils.py:315} DEBUG - 2024-04-29 13:20:53 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.61921199A>A;Error from VEP for: 1:g.61921199A>A | |
| [2024-04-29 13:20:54,653] {utils.py:315} DEBUG - 2024-04-29 13:20:53 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.64644707G>G;Error from VEP for: 1:g.64644707G>G | |
| [2024-04-29 13:20:54,653] {utils.py:315} DEBUG - 2024-04-29 13:20:53 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.65305357T>T;Error from VEP for: 1:g.65305357T>T | |
| [2024-04-29 13:20:54,653] {utils.py:315} DEBUG - 2024-04-29 13:20:53 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.65306997T>T;Error from VEP for: 1:g.65306997T>T | |
| [2024-04-29 13:20:54,653] {utils.py:315} DEBUG - 2024-04-29 13:20:54 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.65325833G>G;Error from VEP for: 1:g.65325833G>G | |
| [2024-04-29 13:20:55,917] {utils.py:315} DEBUG - 2024-04-29 13:20:54 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.65330630T>T;Error from VEP for: 1:g.65330630T>T | |
| [2024-04-29 13:20:55,917] {utils.py:315} DEBUG - 2024-04-29 13:20:54 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.65332803C>C;Error from VEP for: 1:g.65332803C>C | |
| [2024-04-29 13:20:55,917] {utils.py:315} DEBUG - 2024-04-29 13:20:54 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.65339111T>T;Error from VEP for: 1:g.65339111T>T | |
| [2024-04-29 13:20:55,917] {utils.py:315} DEBUG - 2024-04-29 13:20:54 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.68697990C>C;Error from VEP for: 1:g.68697990C>C | |
| [2024-04-29 13:20:55,917] {utils.py:315} DEBUG - 2024-04-29 13:20:54 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.68698043T>T;Error from VEP for: 1:g.68698043T>T | |
| [2024-04-29 13:20:55,917] {utils.py:315} DEBUG - 2024-04-29 13:20:54 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.68698078_68698081delinsCTTT;Error from VEP for: 1:g.68698078_68698081delinsCTTT | |
| [2024-04-29 13:20:55,917] {utils.py:315} DEBUG - 2024-04-29 13:20:54 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.70451966A>A;Error from VEP for: 1:g.70451966A>A | |
| [2024-04-29 13:20:55,917] {utils.py:315} DEBUG - 2024-04-29 13:20:54 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.70504079C>C;Error from VEP for: 1:g.70504079C>C | |
| [2024-04-29 13:20:55,917] {utils.py:315} DEBUG - 2024-04-29 13:20:54 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.74797186T>T;Error from VEP for: 1:g.74797186T>T | |
| [2024-04-29 13:20:55,917] {utils.py:315} DEBUG - 2024-04-29 13:20:54 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.74808813A>A;Error from VEP for: 1:g.74808813A>A | |
| [2024-04-29 13:20:55,917] {utils.py:315} DEBUG - 2024-04-29 13:20:54 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.74836080T>T;Error from VEP for: 1:g.74836080T>T | |
| [2024-04-29 13:20:55,917] {utils.py:315} DEBUG - 2024-04-29 13:20:54 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.74905217G>G;Error from VEP for: 1:g.74905217G>G | |
| [2024-04-29 13:20:55,917] {utils.py:315} DEBUG - 2024-04-29 13:20:54 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.84644898A>A;Error from VEP for: 1:g.84644898A>A | |
| [2024-04-29 13:20:55,917] {utils.py:315} DEBUG - 2024-04-29 13:20:54 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.85733513A>A;Error from VEP for: 1:g.85733513A>A | |
| [2024-04-29 13:20:55,917] {utils.py:315} DEBUG - 2024-04-29 13:20:54 [main] INFO org.cbioportal.annotator.internal.GenomeNexusImpl - On record 2500 out of 116708, annotation 2% complete | |
| [2024-04-29 13:20:55,917] {utils.py:315} DEBUG - 2024-04-29 13:20:54 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.89250482_89250484delinsTCT;Error from VEP for: 1:g.89250482_89250484delinsTCT | |
| [2024-04-29 13:20:55,917] {utils.py:315} DEBUG - 2024-04-29 13:20:54 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.89279292T>T;Error from VEP for: 1:g.89279292T>T | |
| [2024-04-29 13:20:55,917] {utils.py:315} DEBUG - 2024-04-29 13:20:54 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.89299231_89299233delinsTTG;Error from VEP for: 1:g.89299231_89299233delinsTTG | |
| [2024-04-29 13:20:55,917] {utils.py:315} DEBUG - 2024-04-29 13:20:54 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.91967315T>T;Error from VEP for: 1:g.91967315T>T | |
| [2024-04-29 13:20:55,917] {utils.py:315} DEBUG - 2024-04-29 13:20:54 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.91967357A>A;Error from VEP for: 1:g.91967357A>A | |
| [2024-04-29 13:20:55,917] {utils.py:315} DEBUG - 2024-04-29 13:20:54 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.91977242T>T;Error from VEP for: 1:g.91977242T>T | |
| [2024-04-29 13:20:55,917] {utils.py:315} DEBUG - 2024-04-29 13:20:54 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.91977476A>A;Error from VEP for: 1:g.91977476A>A | |
| [2024-04-29 13:20:55,917] {utils.py:315} DEBUG - 2024-04-29 13:20:54 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.91990150C>C;Error from VEP for: 1:g.91990150C>C | |
| [2024-04-29 13:20:55,917] {utils.py:315} DEBUG - 2024-04-29 13:20:54 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.92428315_92428316delinsTC;Error from VEP for: 1:g.92428315_92428316delinsTC | |
| [2024-04-29 13:20:55,917] {utils.py:315} DEBUG - 2024-04-29 13:20:54 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.92479860_92479864delinsTAAAA;Error from VEP for: 1:g.92479860_92479864delinsTAAAA | |
| [2024-04-29 13:20:55,917] {utils.py:315} DEBUG - 2024-04-29 13:20:54 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.94639389_94639391delinsACA;Error from VEP for: 1:g.94639389_94639391delinsACA | |
| [2024-04-29 13:20:55,917] {utils.py:315} DEBUG - 2024-04-29 13:20:54 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.94639400A>A;Error from VEP for: 1:g.94639400A>A | |
| [2024-04-29 13:20:55,917] {utils.py:315} DEBUG - 2024-04-29 13:20:54 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.94643144T>T;Error from VEP for: 1:g.94643144T>T | |
| [2024-04-29 13:20:55,917] {utils.py:315} DEBUG - 2024-04-29 13:20:55 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.94643144T>T;Error from VEP for: 1:g.94643144T>T | |
| [2024-04-29 13:20:58,091] {utils.py:315} DEBUG - 2024-04-29 13:20:55 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.94643144_94643145delinsTT;Error from VEP for: 1:g.94643144_94643145delinsTT | |
| [2024-04-29 13:20:58,091] {utils.py:315} DEBUG - 2024-04-29 13:20:55 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.94645419T>T;Error from VEP for: 1:g.94645419T>T | |
| [2024-04-29 13:20:58,091] {utils.py:315} DEBUG - 2024-04-29 13:20:55 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.94654492A>A;Error from VEP for: 1:g.94654492A>A | |
| [2024-04-29 13:20:58,091] {utils.py:315} DEBUG - 2024-04-29 13:20:55 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.94668131T>T;Error from VEP for: 1:g.94668131T>T | |
| [2024-04-29 13:20:58,091] {utils.py:315} DEBUG - 2024-04-29 13:20:55 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.94668155T>T;Error from VEP for: 1:g.94668155T>T | |
| [2024-04-29 13:20:58,091] {utils.py:315} DEBUG - 2024-04-29 13:20:55 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.97771791A>A;Error from VEP for: 1:g.97771791A>A | |
| [2024-04-29 13:20:58,091] {utils.py:315} DEBUG - 2024-04-29 13:20:55 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.110882115_110882123delinsCGGGTTACT;Error from VEP for: 1:g.110882115_110882123delinsCGGGTTACT | |
| [2024-04-29 13:20:58,091] {utils.py:315} DEBUG - 2024-04-29 13:20:55 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.110884036_110884038delinsCTC;Error from VEP for: 1:g.110884036_110884038delinsCTC | |
| [2024-04-29 13:20:58,091] {utils.py:315} DEBUG - 2024-04-29 13:20:55 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.110884261_110884263delinsAAG;Error from VEP for: 1:g.110884261_110884263delinsAAG | |
| [2024-04-29 13:20:58,091] {utils.py:315} DEBUG - 2024-04-29 13:20:55 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.114940212T>T;Error from VEP for: 1:g.114940212T>T | |
| [2024-04-29 13:20:58,091] {utils.py:315} DEBUG - 2024-04-29 13:20:55 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.114940228_114940229delinsCG;Error from VEP for: 1:g.114940228_114940229delinsCG | |
| [2024-04-29 13:20:58,091] {utils.py:315} DEBUG - 2024-04-29 13:20:55 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.114940230T>T;Error from VEP for: 1:g.114940230T>T | |
| [2024-04-29 13:20:58,091] {utils.py:315} DEBUG - 2024-04-29 13:20:55 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.114940230_114940231delinsTT;Error from VEP for: 1:g.114940230_114940231delinsTT | |
| [2024-04-29 13:20:58,091] {utils.py:315} DEBUG - 2024-04-29 13:20:55 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.114940230_114940232delinsTTT;Error from VEP for: 1:g.114940230_114940232delinsTTT | |
| [2024-04-29 13:20:58,091] {utils.py:315} DEBUG - 2024-04-29 13:20:55 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.114940230_114940233delinsTTTT;Error from VEP for: 1:g.114940230_114940233delinsTTTT | |
| [2024-04-29 13:20:58,091] {utils.py:315} DEBUG - 2024-04-29 13:20:55 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.114940230_114940234delinsTTTTT;Error from VEP for: 1:g.114940230_114940234delinsTTTTT | |
| [2024-04-29 13:20:58,091] {utils.py:315} DEBUG - 2024-04-29 13:20:58 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.114952840_114952842delinsAGA;Error from VEP for: 1:g.114952840_114952842delinsAGA | |
| [2024-04-29 13:20:58,674] {utils.py:315} DEBUG - 2024-04-29 13:20:58 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.115053195C>C;Error from VEP for: 1:g.115053195C>C | |
| [2024-04-29 13:20:58,674] {utils.py:315} DEBUG - 2024-04-29 13:20:58 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.115258722_115258723delinsTG;Error from VEP for: 1:g.115258722_115258723delinsTG | |
| [2024-04-29 13:20:58,674] {utils.py:315} DEBUG - 2024-04-29 13:20:58 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.115828668G>G;Error from VEP for: 1:g.115828668G>G | |
| [2024-04-29 13:20:58,674] {utils.py:315} DEBUG - 2024-04-29 13:20:58 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.115828721_115828722delinsCA;Error from VEP for: 1:g.115828721_115828722delinsCA | |
| [2024-04-29 13:20:58,674] {utils.py:315} DEBUG - 2024-04-29 13:20:58 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.120458436G>G;Error from VEP for: 1:g.120458436G>G | |
| [2024-04-29 13:20:58,674] {utils.py:315} DEBUG - 2024-04-29 13:20:58 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.120466308_120466309delinsCT;Error from VEP for: 1:g.120466308_120466309delinsCT | |
| [2024-04-29 13:20:58,674] {utils.py:315} DEBUG - 2024-04-29 13:20:58 [main] INFO org.cbioportal.annotator.internal.GenomeNexusImpl - On record 3000 out of 116708, annotation 2% complete | |
| [2024-04-29 13:20:58,674] {utils.py:315} DEBUG - 2024-04-29 13:20:58 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.120612003_120612004delinsGG;Error from VEP for: 1:g.120612003_120612004delinsGG | |
| [2024-04-29 13:20:58,675] {utils.py:315} DEBUG - 2024-04-29 13:20:58 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.144859817_144859819delinsGGA;Error from VEP for: 1:g.144859817_144859819delinsGGA | |
| [2024-04-29 13:20:58,675] {utils.py:315} DEBUG - 2024-04-29 13:20:58 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.144873963T>T;Error from VEP for: 1:g.144873963T>T | |
| [2024-04-29 13:20:58,675] {utils.py:315} DEBUG - 2024-04-29 13:20:58 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.144873963T>T;Error from VEP for: 1:g.144873963T>T | |
| [2024-04-29 13:20:59,595] {utils.py:315} DEBUG - 2024-04-29 13:20:58 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.144915624G>G;Error from VEP for: 1:g.144915624G>G | |
| [2024-04-29 13:20:59,595] {utils.py:315} DEBUG - 2024-04-29 13:20:58 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.144917828A>A;Error from VEP for: 1:g.144917828A>A | |
| [2024-04-29 13:20:59,595] {utils.py:315} DEBUG - 2024-04-29 13:20:58 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.144918891_144918892delinsTG;Error from VEP for: 1:g.144918891_144918892delinsTG | |
| [2024-04-29 13:20:59,595] {utils.py:315} DEBUG - 2024-04-29 13:20:58 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.144923729T>T;Error from VEP for: 1:g.144923729T>T | |
| [2024-04-29 13:20:59,595] {utils.py:315} DEBUG - 2024-04-29 13:20:59 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.144923729T>T;Error from VEP for: 1:g.144923729T>T | |
| [2024-04-29 13:21:01,094] {utils.py:315} DEBUG - 2024-04-29 13:20:59 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.144931738_144931740delinsGAG;Error from VEP for: 1:g.144931738_144931740delinsGAG | |
| [2024-04-29 13:21:01,095] {utils.py:315} DEBUG - 2024-04-29 13:20:59 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.145527998G>G;Error from VEP for: 1:g.145527998G>G | |
| [2024-04-29 13:21:01,096] {utils.py:315} DEBUG - 2024-04-29 13:20:59 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.145528467_145528470delinsAGGT;Error from VEP for: 1:g.145528467_145528470delinsAGGT | |
| [2024-04-29 13:21:01,096] {utils.py:315} DEBUG - 2024-04-29 13:20:59 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.145533551G>G;Error from VEP for: 1:g.145533551G>G | |
| [2024-04-29 13:21:01,096] {utils.py:315} DEBUG - 2024-04-29 13:20:59 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.145534122C>C;Error from VEP for: 1:g.145534122C>C | |
| [2024-04-29 13:21:01,096] {utils.py:315} DEBUG - 2024-04-29 13:20:59 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.145541842C>C;Error from VEP for: 1:g.145541842C>C | |
| [2024-04-29 13:21:01,096] {utils.py:315} DEBUG - 2024-04-29 13:20:59 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.145698875T>T;Error from VEP for: 1:g.145698875T>T | |
| [2024-04-29 13:21:01,096] {utils.py:315} DEBUG - 2024-04-29 13:20:59 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.147091501C>C;Error from VEP for: 1:g.147091501C>C | |
| [2024-04-29 13:21:01,096] {utils.py:315} DEBUG - 2024-04-29 13:20:59 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.147092024_147092026delinsCTT;Error from VEP for: 1:g.147092024_147092026delinsCTT | |
| [2024-04-29 13:21:01,096] {utils.py:315} DEBUG - 2024-04-29 13:20:59 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.147092681C>C;Error from VEP for: 1:g.147092681C>C | |
| [2024-04-29 13:21:01,096] {utils.py:315} DEBUG - 2024-04-29 13:20:59 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.147094076C>C;Error from VEP for: 1:g.147094076C>C | |
| [2024-04-29 13:21:01,096] {utils.py:315} DEBUG - 2024-04-29 13:20:59 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.147096896G>G;Error from VEP for: 1:g.147096896G>G | |
| [2024-04-29 13:21:01,096] {utils.py:315} DEBUG - 2024-04-29 13:20:59 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.149900796A>A;Error from VEP for: 1:g.149900796A>A | |
| [2024-04-29 13:21:01,096] {utils.py:315} DEBUG - 2024-04-29 13:20:59 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.149900986A>A;Error from VEP for: 1:g.149900986A>A | |
| [2024-04-29 13:21:01,096] {utils.py:315} DEBUG - 2024-04-29 13:20:59 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.149900986_149900987delinsAA;Error from VEP for: 1:g.149900986_149900987delinsAA | |
| [2024-04-29 13:21:01,096] {utils.py:315} DEBUG - 2024-04-29 13:20:59 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.149900986_149900988delinsAAA;Error from VEP for: 1:g.149900986_149900988delinsAAA | |
| [2024-04-29 13:21:01,096] {utils.py:315} DEBUG - 2024-04-29 13:20:59 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.149900986_149900990delinsAAAAA;Error from VEP for: 1:g.149900986_149900990delinsAAAAA | |
| [2024-04-29 13:21:01,096] {utils.py:315} DEBUG - 2024-04-29 13:20:59 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.149902648A>A;Error from VEP for: 1:g.149902648A>A | |
| [2024-04-29 13:21:01,096] {utils.py:315} DEBUG - 2024-04-29 13:20:59 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.149905828G>G;Error from VEP for: 1:g.149905828G>G | |
| [2024-04-29 13:21:01,096] {utils.py:315} DEBUG - 2024-04-29 13:20:59 [main] INFO org.cbioportal.annotator.internal.GenomeNexusImpl - On record 3500 out of 116708, annotation 2% complete | |
| [2024-04-29 13:21:01,096] {utils.py:315} DEBUG - 2024-04-29 13:20:59 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.150483445G>G;Error from VEP for: 1:g.150483445G>G | |
| [2024-04-29 13:21:01,096] {utils.py:315} DEBUG - 2024-04-29 13:20:59 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.150483697G>G;Error from VEP for: 1:g.150483697G>G | |
| [2024-04-29 13:21:01,096] {utils.py:315} DEBUG - 2024-04-29 13:21:01 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.150485236C>C;Error from VEP for: 1:g.150485236C>C | |
| [2024-04-29 13:21:01,572] {utils.py:315} DEBUG - 2024-04-29 13:21:01 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.150549737_150549744delinsGCTAGGTT;Error from VEP for: 1:g.150549737_150549744delinsGCTAGGTT | |
| [2024-04-29 13:21:01,572] {utils.py:315} DEBUG - 2024-04-29 13:21:01 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.150551677_150551679delinsCTC;Error from VEP for: 1:g.150551677_150551679delinsCTC | |
| [2024-04-29 13:21:01,573] {utils.py:315} DEBUG - 2024-04-29 13:21:01 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.150672622T>T;Error from VEP for: 1:g.150672622T>T | |
| [2024-04-29 13:21:01,573] {utils.py:315} DEBUG - 2024-04-29 13:21:01 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.150675811_150675813delinsCTT;Error from VEP for: 1:g.150675811_150675813delinsCTT | |
| [2024-04-29 13:21:01,573] {utils.py:315} DEBUG - 2024-04-29 13:21:01 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.150676776T>T;Error from VEP for: 1:g.150676776T>T | |
| [2024-04-29 13:21:01,573] {utils.py:315} DEBUG - 2024-04-29 13:21:01 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.150680744A>A;Error from VEP for: 1:g.150680744A>A | |
| [2024-04-29 13:21:01,573] {utils.py:315} DEBUG - 2024-04-29 13:21:01 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.150785729_150785737delinsCTGCTGGCC;Error from VEP for: 1:g.150785729_150785737delinsCTGCTGGCC | |
| [2024-04-29 13:21:01,573] {utils.py:315} DEBUG - 2024-04-29 13:21:01 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.150789283G>G;Error from VEP for: 1:g.150789283G>G | |
| [2024-04-29 13:21:01,573] {utils.py:315} DEBUG - 2024-04-29 13:21:01 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.150902577_150902581delinsTCCTC;Error from VEP for: 1:g.150902577_150902581delinsTCCTC | |
| [2024-04-29 13:21:01,573] {utils.py:315} DEBUG - 2024-04-29 13:21:01 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.150917624G>G;Error from VEP for: 1:g.150917624G>G | |
| [2024-04-29 13:21:01,573] {utils.py:315} DEBUG - 2024-04-29 13:21:01 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.150933159C>C;Error from VEP for: 1:g.150933159C>C | |
| [2024-04-29 13:21:01,573] {utils.py:315} DEBUG - 2024-04-29 13:21:01 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.150933382C>C;Error from VEP for: 1:g.150933382C>C | |
| [2024-04-29 13:21:01,573] {utils.py:315} DEBUG - 2024-04-29 13:21:01 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.150936032_150936055delinsAAATCAACCCGAGGCTTTGCTCTT;Error from VEP for: 1:g.150936032_150936055delinsAAATCAACCCGAGGCTTTGCTCTT | |
| [2024-04-29 13:21:01,573] {utils.py:315} DEBUG - 2024-04-29 13:21:01 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.151206914T>T;Error from VEP for: 1:g.151206914T>T | |
| [2024-04-29 13:21:01,573] {utils.py:315} DEBUG - 2024-04-29 13:21:01 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.151209155C>C;Error from VEP for: 1:g.151209155C>C | |
| [2024-04-29 13:21:01,573] {utils.py:315} DEBUG - 2024-04-29 13:21:01 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.154131355T>T;Error from VEP for: 1:g.154131355T>T | |
| [2024-04-29 13:21:02,698] {utils.py:315} DEBUG - 2024-04-29 13:21:01 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.154144638A>A;Error from VEP for: 1:g.154144638A>A | |
| [2024-04-29 13:21:02,698] {utils.py:315} DEBUG - 2024-04-29 13:21:01 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.154144674A>A;Error from VEP for: 1:g.154144674A>A | |
| [2024-04-29 13:21:02,698] {utils.py:315} DEBUG - 2024-04-29 13:21:01 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.154145644T>T;Error from VEP for: 1:g.154145644T>T | |
| [2024-04-29 13:21:02,698] {utils.py:315} DEBUG - 2024-04-29 13:21:01 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.154936488_154936489delinsAC;Error from VEP for: 1:g.154936488_154936489delinsAC | |
| [2024-04-29 13:21:02,698] {utils.py:315} DEBUG - 2024-04-29 13:21:01 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.154938890C>C;Error from VEP for: 1:g.154938890C>C | |
| [2024-04-29 13:21:02,698] {utils.py:315} DEBUG - 2024-04-29 13:21:01 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.154941251_154941253delinsCTC;Error from VEP for: 1:g.154941251_154941253delinsCTC | |
| [2024-04-29 13:21:02,698] {utils.py:315} DEBUG - 2024-04-29 13:21:01 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.154942911G>G;Error from VEP for: 1:g.154942911G>G | |
| [2024-04-29 13:21:02,699] {utils.py:315} DEBUG - 2024-04-29 13:21:02 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.155160853_155160863delinsAGGGTGGTAGG;Error from VEP for: 1:g.155160853_155160863delinsAGGGTGGTAGG | |
| [2024-04-29 13:21:04,103] {utils.py:315} DEBUG - 2024-04-29 13:21:02 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.155165845C>C;Error from VEP for: 1:g.155165845C>C | |
| [2024-04-29 13:21:04,103] {utils.py:315} DEBUG - 2024-04-29 13:21:02 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.155172174_155172175delinsAG;Error from VEP for: 1:g.155172174_155172175delinsAG | |
| [2024-04-29 13:21:04,103] {utils.py:315} DEBUG - 2024-04-29 13:21:02 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.155174377A>A;Error from VEP for: 1:g.155174377A>A | |
| [2024-04-29 13:21:04,103] {utils.py:315} DEBUG - 2024-04-29 13:21:02 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.155232978_155232979delinsAA;Error from VEP for: 1:g.155232978_155232979delinsAA | |
| [2024-04-29 13:21:04,103] {utils.py:315} DEBUG - 2024-04-29 13:21:02 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.155233768_155233769delinsAT;Error from VEP for: 1:g.155233768_155233769delinsAT | |
| [2024-04-29 13:21:04,103] {utils.py:315} DEBUG - 2024-04-29 13:21:02 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.156106585_156106586delinsAG;Error from VEP for: 1:g.156106585_156106586delinsAG | |
| [2024-04-29 13:21:04,103] {utils.py:315} DEBUG - 2024-04-29 13:21:02 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.156108487G>G;Error from VEP for: 1:g.156108487G>G | |
| [2024-04-29 13:21:04,103] {utils.py:315} DEBUG - 2024-04-29 13:21:02 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.156109034T>T;Error from VEP for: 1:g.156109034T>T | |
| [2024-04-29 13:21:04,103] {utils.py:315} DEBUG - 2024-04-29 13:21:02 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.156109095A>A;Error from VEP for: 1:g.156109095A>A | |
| [2024-04-29 13:21:04,103] {utils.py:315} DEBUG - 2024-04-29 13:21:02 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.156109095_156109096delinsAA;Error from VEP for: 1:g.156109095_156109096delinsAA | |
| [2024-04-29 13:21:04,103] {utils.py:315} DEBUG - 2024-04-29 13:21:02 [main] INFO org.cbioportal.annotator.internal.GenomeNexusImpl - On record 4000 out of 116708, annotation 3% complete | |
| [2024-04-29 13:21:04,103] {utils.py:315} DEBUG - 2024-04-29 13:21:02 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.156761536C>C;Error from VEP for: 1:g.156761536C>C | |
| [2024-04-29 13:21:04,103] {utils.py:315} DEBUG - 2024-04-29 13:21:02 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.156785545C>C;Error from VEP for: 1:g.156785545C>C | |
| [2024-04-29 13:21:04,103] {utils.py:315} DEBUG - 2024-04-29 13:21:02 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.156811903C>C;Error from VEP for: 1:g.156811903C>C | |
| [2024-04-29 13:21:04,103] {utils.py:315} DEBUG - 2024-04-29 13:21:02 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.156814053C>C;Error from VEP for: 1:g.156814053C>C | |
| [2024-04-29 13:21:04,103] {utils.py:315} DEBUG - 2024-04-29 13:21:02 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.156821303C>C;Error from VEP for: 1:g.156821303C>C | |
| [2024-04-29 13:21:04,103] {utils.py:315} DEBUG - 2024-04-29 13:21:02 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.156838011C>C;Error from VEP for: 1:g.156838011C>C | |
| [2024-04-29 13:21:04,104] {utils.py:315} DEBUG - 2024-04-29 13:21:02 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.156846308C>C;Error from VEP for: 1:g.156846308C>C | |
| [2024-04-29 13:21:04,104] {utils.py:315} DEBUG - 2024-04-29 13:21:02 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.156849088_156849093delinsGGGACT;Error from VEP for: 1:g.156849088_156849093delinsGGGACT | |
| [2024-04-29 13:21:04,104] {utils.py:315} DEBUG - 2024-04-29 13:21:02 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.161293401_161293405delinsCAGAC;Error from VEP for: 1:g.161293401_161293405delinsCAGAC | |
| [2024-04-29 13:21:04,104] {utils.py:315} DEBUG - 2024-04-29 13:21:02 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.161647539C>C;Error from VEP for: 1:g.161647539C>C | |
| [2024-04-29 13:21:04,104] {utils.py:315} DEBUG - 2024-04-29 13:21:02 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.162735803_162735805delinsACA;Error from VEP for: 1:g.162735803_162735805delinsACA | |
| [2024-04-29 13:21:04,104] {utils.py:315} DEBUG - 2024-04-29 13:21:02 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.162735841C>C;Error from VEP for: 1:g.162735841C>C | |
| [2024-04-29 13:21:04,104] {utils.py:315} DEBUG - 2024-04-29 13:21:02 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.162750211T>T;Error from VEP for: 1:g.162750211T>T | |
| [2024-04-29 13:21:04,104] {utils.py:315} DEBUG - 2024-04-29 13:21:02 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.162750211_162750212delinsTT;Error from VEP for: 1:g.162750211_162750212delinsTT | |
| [2024-04-29 13:21:04,104] {utils.py:315} DEBUG - 2024-04-29 13:21:04 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.162750211_162750212delinsTT;Error from VEP for: 1:g.162750211_162750212delinsTT | |
| [2024-04-29 13:21:05,523] {utils.py:315} DEBUG - 2024-04-29 13:21:04 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.162750211_162750213delinsTTT;Error from VEP for: 1:g.162750211_162750213delinsTTT | |
| [2024-04-29 13:21:05,523] {utils.py:315} DEBUG - 2024-04-29 13:21:04 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.162750211_162750214delinsTTTT;Error from VEP for: 1:g.162750211_162750214delinsTTTT | |
| [2024-04-29 13:21:05,523] {utils.py:315} DEBUG - 2024-04-29 13:21:04 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.162750211_162750215delinsTTTTT;Error from VEP for: 1:g.162750211_162750215delinsTTTTT | |
| [2024-04-29 13:21:05,523] {utils.py:315} DEBUG - 2024-04-29 13:21:04 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.164816108T>T;Error from VEP for: 1:g.164816108T>T | |
| [2024-04-29 13:21:05,523] {utils.py:315} DEBUG - 2024-04-29 13:21:04 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.169822809A>A;Error from VEP for: 1:g.169822809A>A | |
| [2024-04-29 13:21:05,523] {utils.py:315} DEBUG - 2024-04-29 13:21:04 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.169823869_169823870delinsCC;Error from VEP for: 1:g.169823869_169823870delinsCC | |
| [2024-04-29 13:21:05,523] {utils.py:315} DEBUG - 2024-04-29 13:21:04 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.169833511T>T;Error from VEP for: 1:g.169833511T>T | |
| [2024-04-29 13:21:05,523] {utils.py:315} DEBUG - 2024-04-29 13:21:04 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.170633445A>A;Error from VEP for: 1:g.170633445A>A | |
| [2024-04-29 13:21:05,523] {utils.py:315} DEBUG - 2024-04-29 13:21:04 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.170688888A>A;Error from VEP for: 1:g.170688888A>A | |
| [2024-04-29 13:21:05,523] {utils.py:315} DEBUG - 2024-04-29 13:21:04 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.170705428_170705431delinsACAA;Error from VEP for: 1:g.170705428_170705431delinsACAA | |
| [2024-04-29 13:21:05,523] {utils.py:315} DEBUG - 2024-04-29 13:21:04 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.171293417T>T;Error from VEP for: 1:g.171293417T>T | |
| [2024-04-29 13:21:05,523] {utils.py:315} DEBUG - 2024-04-29 13:21:04 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.171301990A>A;Error from VEP for: 1:g.171301990A>A | |
| [2024-04-29 13:21:05,523] {utils.py:315} DEBUG - 2024-04-29 13:21:04 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.171303551A>A;Error from VEP for: 1:g.171303551A>A | |
| [2024-04-29 13:21:05,523] {utils.py:315} DEBUG - 2024-04-29 13:21:04 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.175049402C>C;Error from VEP for: 1:g.175049402C>C | |
| [2024-04-29 13:21:05,523] {utils.py:315} DEBUG - 2024-04-29 13:21:04 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.175086253C>C;Error from VEP for: 1:g.175086253C>C | |
| [2024-04-29 13:21:05,523] {utils.py:315} DEBUG - 2024-04-29 13:21:04 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.176833332A>A;Error from VEP for: 1:g.176833332A>A | |
| [2024-04-29 13:21:05,524] {utils.py:315} DEBUG - 2024-04-29 13:21:04 [main] INFO org.cbioportal.annotator.internal.GenomeNexusImpl - On record 4500 out of 116708, annotation 3% complete | |
| [2024-04-29 13:21:05,524] {utils.py:315} DEBUG - 2024-04-29 13:21:04 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.177133852G>G;Error from VEP for: 1:g.177133852G>G | |
| [2024-04-29 13:21:05,524] {utils.py:315} DEBUG - 2024-04-29 13:21:04 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.179077445G>G;Error from VEP for: 1:g.179077445G>G | |
| [2024-04-29 13:21:05,524] {utils.py:315} DEBUG - 2024-04-29 13:21:04 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.179078242C>C;Error from VEP for: 1:g.179078242C>C | |
| [2024-04-29 13:21:05,524] {utils.py:315} DEBUG - 2024-04-29 13:21:04 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.179086420A>A;Error from VEP for: 1:g.179086420A>A | |
| [2024-04-29 13:21:05,524] {utils.py:315} DEBUG - 2024-04-29 13:21:05 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.179086420A>A;Error from VEP for: 1:g.179086420A>A | |
| [2024-04-29 13:21:06,802] {utils.py:315} DEBUG - 2024-04-29 13:21:05 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.182554909C>C;Error from VEP for: 1:g.182554909C>C | |
| [2024-04-29 13:21:06,802] {utils.py:315} DEBUG - 2024-04-29 13:21:05 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.182555260G>G;Error from VEP for: 1:g.182555260G>G | |
| [2024-04-29 13:21:06,802] {utils.py:315} DEBUG - 2024-04-29 13:21:05 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.182555468_182555471delinsCTTT;Error from VEP for: 1:g.182555468_182555471delinsCTTT | |
| [2024-04-29 13:21:06,802] {utils.py:315} DEBUG - 2024-04-29 13:21:05 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.183881395A>A;Error from VEP for: 1:g.183881395A>A | |
| [2024-04-29 13:21:06,802] {utils.py:315} DEBUG - 2024-04-29 13:21:05 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.186283331_186283332delinsAC;Error from VEP for: 1:g.186283331_186283332delinsAC | |
| [2024-04-29 13:21:06,802] {utils.py:315} DEBUG - 2024-04-29 13:21:05 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.186283638_186283644delinsTAATTAT;Error from VEP for: 1:g.186283638_186283644delinsTAATTAT | |
| [2024-04-29 13:21:06,802] {utils.py:315} DEBUG - 2024-04-29 13:21:05 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.186283666A>A;Error from VEP for: 1:g.186283666A>A | |
| [2024-04-29 13:21:06,802] {utils.py:315} DEBUG - 2024-04-29 13:21:05 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.186291530A>A;Error from VEP for: 1:g.186291530A>A | |
| [2024-04-29 13:21:06,802] {utils.py:315} DEBUG - 2024-04-29 13:21:05 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.186292981_186292983delinsGCA;Error from VEP for: 1:g.186292981_186292983delinsGCA | |
| [2024-04-29 13:21:06,802] {utils.py:315} DEBUG - 2024-04-29 13:21:05 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.193091234_193091236delinsAGG;Error from VEP for: 1:g.193091234_193091236delinsAGG | |
| [2024-04-29 13:21:06,802] {utils.py:315} DEBUG - 2024-04-29 13:21:05 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.193091320G>G;Error from VEP for: 1:g.193091320G>G | |
| [2024-04-29 13:21:06,802] {utils.py:315} DEBUG - 2024-04-29 13:21:05 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.198222298A>A;Error from VEP for: 1:g.198222298A>A | |
| [2024-04-29 13:21:06,802] {utils.py:315} DEBUG - 2024-04-29 13:21:05 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.198723446_198723449delinsAGAA;Error from VEP for: 1:g.198723446_198723449delinsAGAA | |
| [2024-04-29 13:21:06,802] {utils.py:315} DEBUG - 2024-04-29 13:21:05 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.204393961_204393963delinsGGT;Error from VEP for: 1:g.204393961_204393963delinsGGT | |
| [2024-04-29 13:21:06,802] {utils.py:315} DEBUG - 2024-04-29 13:21:05 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.204394164_204394166delinsACC;Error from VEP for: 1:g.204394164_204394166delinsACC | |
| [2024-04-29 13:21:06,802] {utils.py:315} DEBUG - 2024-04-29 13:21:05 [main] INFO org.cbioportal.annotator.internal.GenomeNexusImpl - On record 5000 out of 116708, annotation 4% complete | |
| [2024-04-29 13:21:06,802] {utils.py:315} DEBUG - 2024-04-29 13:21:06 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.204423610A>A;Error from VEP for: 1:g.204423610A>A | |
| [2024-04-29 13:21:08,021] {utils.py:315} DEBUG - 2024-04-29 13:21:06 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.204426889G>G;Error from VEP for: 1:g.204426889G>G | |
| [2024-04-29 13:21:08,021] {utils.py:315} DEBUG - 2024-04-29 13:21:06 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.204438072G>G;Error from VEP for: 1:g.204438072G>G | |
| [2024-04-29 13:21:08,021] {utils.py:315} DEBUG - 2024-04-29 13:21:06 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.204438235_204438237delinsATT;Error from VEP for: 1:g.204438235_204438237delinsATT | |
| [2024-04-29 13:21:08,021] {utils.py:315} DEBUG - 2024-04-29 13:21:06 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.204515939A>A;Error from VEP for: 1:g.204515939A>A | |
| [2024-04-29 13:21:08,021] {utils.py:315} DEBUG - 2024-04-29 13:21:06 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.205129365C>C;Error from VEP for: 1:g.205129365C>C | |
| [2024-04-29 13:21:08,021] {utils.py:315} DEBUG - 2024-04-29 13:21:06 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.205138425T>T;Error from VEP for: 1:g.205138425T>T | |
| [2024-04-29 13:21:08,021] {utils.py:315} DEBUG - 2024-04-29 13:21:06 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.205273141G>G;Error from VEP for: 1:g.205273141G>G | |
| [2024-04-29 13:21:08,021] {utils.py:315} DEBUG - 2024-04-29 13:21:06 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.205273223_205273225delinsCTT;Error from VEP for: 1:g.205273223_205273225delinsCTT | |
| [2024-04-29 13:21:08,021] {utils.py:315} DEBUG - 2024-04-29 13:21:06 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.205277809C>C;Error from VEP for: 1:g.205277809C>C | |
| [2024-04-29 13:21:08,021] {utils.py:315} DEBUG - 2024-04-29 13:21:06 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.205388453T>T;Error from VEP for: 1:g.205388453T>T | |
| [2024-04-29 13:21:08,021] {utils.py:315} DEBUG - 2024-04-29 13:21:06 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.205492544G>G;Error from VEP for: 1:g.205492544G>G | |
| [2024-04-29 13:21:08,021] {utils.py:315} DEBUG - 2024-04-29 13:21:06 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.205492639C>C;Error from VEP for: 1:g.205492639C>C | |
| [2024-04-29 13:21:08,021] {utils.py:315} DEBUG - 2024-04-29 13:21:06 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.205495890_205495891delinsCT;Error from VEP for: 1:g.205495890_205495891delinsCT | |
| [2024-04-29 13:21:08,021] {utils.py:315} DEBUG - 2024-04-29 13:21:06 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.205497280_205497291delinsACCCCCATTGAT;Error from VEP for: 1:g.205497280_205497291delinsACCCCCATTGAT | |
| [2024-04-29 13:21:08,021] {utils.py:315} DEBUG - 2024-04-29 13:21:06 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.205499346C>C;Error from VEP for: 1:g.205499346C>C | |
| [2024-04-29 13:21:08,021] {utils.py:315} DEBUG - 2024-04-29 13:21:06 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.205628279C>C;Error from VEP for: 1:g.205628279C>C | |
| [2024-04-29 13:21:08,021] {utils.py:315} DEBUG - 2024-04-29 13:21:06 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.205632218_205632253delinsGCCGACAGCCCTTCTGCTGGCTCGGTGGGGCCCAGC;Error from VEP for: 1:g.205632218_205632253delinsGCCGACAGCCCTTCTGCTGGCTCGGTGGGGCCCAGC | |
| [2024-04-29 13:21:08,021] {utils.py:315} DEBUG - 2024-04-29 13:21:06 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.206652330C>C;Error from VEP for: 1:g.206652330C>C | |
| [2024-04-29 13:21:08,021] {utils.py:315} DEBUG - 2024-04-29 13:21:06 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.206810247A>A;Error from VEP for: 1:g.206810247A>A | |
| [2024-04-29 13:21:08,021] {utils.py:315} DEBUG - 2024-04-29 13:21:06 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.206821441A>A;Error from VEP for: 1:g.206821441A>A | |
| [2024-04-29 13:21:08,021] {utils.py:315} DEBUG - 2024-04-29 13:21:06 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.206822409_206822413delinsTAGAG;Error from VEP for: 1:g.206822409_206822413delinsTAGAG | |
| [2024-04-29 13:21:08,021] {utils.py:315} DEBUG - 2024-04-29 13:21:06 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.209786212_209786214delinsATT;Error from VEP for: 1:g.209786212_209786214delinsATT | |
| [2024-04-29 13:21:08,022] {utils.py:315} DEBUG - 2024-04-29 13:21:06 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.211848863_211848865delinsCGC;Error from VEP for: 1:g.211848863_211848865delinsCGC | |
| [2024-04-29 13:21:08,022] {utils.py:315} DEBUG - 2024-04-29 13:21:06 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.213446107G>G;Error from VEP for: 1:g.213446107G>G | |
| [2024-04-29 13:21:08,022] {utils.py:315} DEBUG - 2024-04-29 13:21:08 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.218519992T>T;Error from VEP for: 1:g.218519992T>T | |
| [2024-04-29 13:21:09,343] {utils.py:315} DEBUG - 2024-04-29 13:21:08 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.218520021T>T;Error from VEP for: 1:g.218520021T>T | |
| [2024-04-29 13:21:09,343] {utils.py:315} DEBUG - 2024-04-29 13:21:08 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.218578686_218578688delinsTTG;Error from VEP for: 1:g.218578686_218578688delinsTTG | |
| [2024-04-29 13:21:09,343] {utils.py:315} DEBUG - 2024-04-29 13:21:08 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.218578686_218578691delinsTTGTTG;Error from VEP for: 1:g.218578686_218578691delinsTTGTTG | |
| [2024-04-29 13:21:09,343] {utils.py:315} DEBUG - 2024-04-29 13:21:08 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.218578727_218578728delinsCT;Error from VEP for: 1:g.218578727_218578728delinsCT | |
| [2024-04-29 13:21:09,343] {utils.py:315} DEBUG - 2024-04-29 13:21:08 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.218578727_218578730delinsCTCT;Error from VEP for: 1:g.218578727_218578730delinsCTCT | |
| [2024-04-29 13:21:09,343] {utils.py:315} DEBUG - 2024-04-29 13:21:08 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.218609371A>A;Error from VEP for: 1:g.218609371A>A | |
| [2024-04-29 13:21:09,343] {utils.py:315} DEBUG - 2024-04-29 13:21:08 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.218614750_218614752delinsATG;Error from VEP for: 1:g.218614750_218614752delinsATG | |
| [2024-04-29 13:21:09,343] {utils.py:315} DEBUG - 2024-04-29 13:21:08 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.220754412T>T;Error from VEP for: 1:g.220754412T>T | |
| [2024-04-29 13:21:09,343] {utils.py:315} DEBUG - 2024-04-29 13:21:08 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.226551692C>C;Error from VEP for: 1:g.226551692C>C | |
| [2024-04-29 13:21:09,343] {utils.py:315} DEBUG - 2024-04-29 13:21:08 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.226564829G>G;Error from VEP for: 1:g.226564829G>G | |
| [2024-04-29 13:21:09,343] {utils.py:315} DEBUG - 2024-04-29 13:21:08 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.226568818C>C;Error from VEP for: 1:g.226568818C>C | |
| [2024-04-29 13:21:09,343] {utils.py:315} DEBUG - 2024-04-29 13:21:08 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.226570820G>G;Error from VEP for: 1:g.226570820G>G | |
| [2024-04-29 13:21:09,343] {utils.py:315} DEBUG - 2024-04-29 13:21:08 [main] INFO org.cbioportal.annotator.internal.GenomeNexusImpl - On record 5500 out of 116708, annotation 4% complete | |
| [2024-04-29 13:21:09,343] {utils.py:315} DEBUG - 2024-04-29 13:21:08 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.227170395C>C;Error from VEP for: 1:g.227170395C>C | |
| [2024-04-29 13:21:09,343] {utils.py:315} DEBUG - 2024-04-29 13:21:08 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.227171585T>T;Error from VEP for: 1:g.227171585T>T | |
| [2024-04-29 13:21:09,343] {utils.py:315} DEBUG - 2024-04-29 13:21:08 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.227171736G>G;Error from VEP for: 1:g.227171736G>G | |
| [2024-04-29 13:21:09,343] {utils.py:315} DEBUG - 2024-04-29 13:21:08 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.227171736_227171737delinsGG;Error from VEP for: 1:g.227171736_227171737delinsGG | |
| [2024-04-29 13:21:09,343] {utils.py:315} DEBUG - 2024-04-29 13:21:08 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.227171736_227171739delinsGGGG;Error from VEP for: 1:g.227171736_227171739delinsGGGG | |
| [2024-04-29 13:21:09,343] {utils.py:315} DEBUG - 2024-04-29 13:21:09 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.227174474_227174475delinsCT;Error from VEP for: 1:g.227174474_227174475delinsCT | |
| [2024-04-29 13:21:10,185] {utils.py:315} DEBUG - 2024-04-29 13:21:09 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.227174548G>G;Error from VEP for: 1:g.227174548G>G | |
| [2024-04-29 13:21:10,185] {utils.py:315} DEBUG - 2024-04-29 13:21:09 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.227182042G>G;Error from VEP for: 1:g.227182042G>G | |
| [2024-04-29 13:21:10,185] {utils.py:315} DEBUG - 2024-04-29 13:21:09 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.227213757T>T;Error from VEP for: 1:g.227213757T>T | |
| [2024-04-29 13:21:10,185] {utils.py:315} DEBUG - 2024-04-29 13:21:09 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.228456350A>A;Error from VEP for: 1:g.228456350A>A | |
| [2024-04-29 13:21:10,185] {utils.py:315} DEBUG - 2024-04-29 13:21:09 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.228467648T>T;Error from VEP for: 1:g.228467648T>T | |
| [2024-04-29 13:21:10,185] {utils.py:315} DEBUG - 2024-04-29 13:21:09 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.228479653C>C;Error from VEP for: 1:g.228479653C>C | |
| [2024-04-29 13:21:10,185] {utils.py:315} DEBUG - 2024-04-29 13:21:09 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.228482070_228482071delinsGT;Error from VEP for: 1:g.228482070_228482071delinsGT | |
| [2024-04-29 13:21:10,185] {utils.py:315} DEBUG - 2024-04-29 13:21:09 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.228495171C>C;Error from VEP for: 1:g.228495171C>C | |
| [2024-04-29 13:21:10,185] {utils.py:315} DEBUG - 2024-04-29 13:21:09 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.228525002C>C;Error from VEP for: 1:g.228525002C>C | |
| [2024-04-29 13:21:10,185] {utils.py:315} DEBUG - 2024-04-29 13:21:09 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.228539086A>A;Error from VEP for: 1:g.228539086A>A | |
| [2024-04-29 13:21:10,185] {utils.py:315} DEBUG - 2024-04-29 13:21:09 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.228547306C>C;Error from VEP for: 1:g.228547306C>C | |
| [2024-04-29 13:21:10,185] {utils.py:315} DEBUG - 2024-04-29 13:21:09 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.228558993_228558994delinsCA;Error from VEP for: 1:g.228558993_228558994delinsCA | |
| [2024-04-29 13:21:10,185] {utils.py:315} DEBUG - 2024-04-29 13:21:09 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.228559442C>C;Error from VEP for: 1:g.228559442C>C | |
| [2024-04-29 13:21:10,186] {utils.py:315} DEBUG - 2024-04-29 13:21:09 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.228559450G>G;Error from VEP for: 1:g.228559450G>G | |
| [2024-04-29 13:21:10,186] {utils.py:315} DEBUG - 2024-04-29 13:21:09 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.229625705A>A;Error from VEP for: 1:g.229625705A>A | |
| [2024-04-29 13:21:10,186] {utils.py:315} DEBUG - 2024-04-29 13:21:09 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.229763339T>T;Error from VEP for: 1:g.229763339T>T | |
| [2024-04-29 13:21:10,186] {utils.py:315} DEBUG - 2024-04-29 13:21:10 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.229773507C>C;Error from VEP for: 1:g.229773507C>C | |
| [2024-04-29 13:21:12,133] {utils.py:315} DEBUG - 2024-04-29 13:21:10 [main] INFO org.cbioportal.annotator.internal.GenomeNexusImpl - On record 6000 out of 116708, annotation 5% complete | |
| [2024-04-29 13:21:12,133] {utils.py:315} DEBUG - 2024-04-29 13:21:10 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.233514890C>C;Error from VEP for: 1:g.233514890C>C | |
| [2024-04-29 13:21:12,133] {utils.py:315} DEBUG - 2024-04-29 13:21:10 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.233518485T>T;Error from VEP for: 1:g.233518485T>T | |
| [2024-04-29 13:21:12,133] {utils.py:315} DEBUG - 2024-04-29 13:21:10 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.240255569_240255571delinsGGC;Error from VEP for: 1:g.240255569_240255571delinsGGC | |
| [2024-04-29 13:21:12,133] {utils.py:315} DEBUG - 2024-04-29 13:21:10 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.240255911_240255912delinsGG;Error from VEP for: 1:g.240255911_240255912delinsGG | |
| [2024-04-29 13:21:12,133] {utils.py:315} DEBUG - 2024-04-29 13:21:10 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.240256637C>C;Error from VEP for: 1:g.240256637C>C | |
| [2024-04-29 13:21:12,133] {utils.py:315} DEBUG - 2024-04-29 13:21:10 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.240370419C>C;Error from VEP for: 1:g.240370419C>C | |
| [2024-04-29 13:21:12,133] {utils.py:315} DEBUG - 2024-04-29 13:21:10 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.240370837C>C;Error from VEP for: 1:g.240370837C>C | |
| [2024-04-29 13:21:12,133] {utils.py:315} DEBUG - 2024-04-29 13:21:10 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.240370858_240370890delinsCCCGGAGCGGGCATACCTCCTCCGCCGCCTCTA;Error from VEP for: 1:g.240370858_240370890delinsCCCGGAGCGGGCATACCTCCTCCGCCGCCTCTA | |
| [2024-04-29 13:21:12,133] {utils.py:315} DEBUG - 2024-04-29 13:21:10 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.240370914_240370946delinsGCCCCCTCTACCCGGAGCGGGAATACCTCCTCC;Error from VEP for: 1:g.240370914_240370946delinsGCCCCCTCTACCCGGAGCGGGAATACCTCCTCC | |
| [2024-04-29 13:21:12,133] {utils.py:315} DEBUG - 2024-04-29 13:21:10 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.240370942_240370974delinsCCTCCGCCCCCTCTACCCGGAGCGGCAATACCC;Error from VEP for: 1:g.240370942_240370974delinsCCTCCGCCCCCTCTACCCGGAGCGGCAATACCC | |
| [2024-04-29 13:21:12,133] {utils.py:315} DEBUG - 2024-04-29 13:21:10 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.240371002_240371034delinsATACCCCTTCCTCCCCCTCTTCCCGGAGCAGGA;Error from VEP for: 1:g.240371002_240371034delinsATACCCCTTCCTCCCCCTCTTCCCGGAGCAGGA | |
| [2024-04-29 13:21:12,133] {utils.py:315} DEBUG - 2024-04-29 13:21:10 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.240371023_240371055delinsCCCGGAGCAGGAATACCTCCTCCACCCCCTCTA;Error from VEP for: 1:g.240371023_240371055delinsCCCGGAGCAGGAATACCTCCTCCACCCCCTCTA | |
| [2024-04-29 13:21:12,133] {utils.py:315} DEBUG - 2024-04-29 13:21:10 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.240371047C>C;Error from VEP for: 1:g.240371047C>C | |
| [2024-04-29 13:21:12,133] {utils.py:315} DEBUG - 2024-04-29 13:21:10 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.240371377_240371409delinsCCCCCTCTACCCGGAGCGGGCATACCCCCTCCG;Error from VEP for: 1:g.240371377_240371409delinsCCCCCTCTACCCGGAGCGGGCATACCCCCTCCG | |
| [2024-04-29 13:21:12,133] {utils.py:315} DEBUG - 2024-04-29 13:21:10 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.240371434_240371436delinsCCT;Error from VEP for: 1:g.240371434_240371436delinsCCT | |
| [2024-04-29 13:21:12,133] {utils.py:315} DEBUG - 2024-04-29 13:21:10 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.240371443_240371475delinsCCCCCTCTACCCGGAGCGGGCATACCCCCTCCT;Error from VEP for: 1:g.240371443_240371475delinsCCCCCTCTACCCGGAGCGGGCATACCCCCTCCT | |
| [2024-04-29 13:21:12,133] {utils.py:315} DEBUG - 2024-04-29 13:21:10 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.240637549_240637550delinsAT;Error from VEP for: 1:g.240637549_240637550delinsAT | |
| [2024-04-29 13:21:12,133] {utils.py:315} DEBUG - 2024-04-29 13:21:10 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.243668408_243668417delinsGGTGGCGAGG;Error from VEP for: 1:g.243668408_243668417delinsGGTGGCGAGG | |
| [2024-04-29 13:21:12,133] {utils.py:315} DEBUG - 2024-04-29 13:21:10 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.247587420G>G;Error from VEP for: 1:g.247587420G>G | |
| [2024-04-29 13:21:12,133] {utils.py:315} DEBUG - 2024-04-29 13:21:10 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.247587426G>G;Error from VEP for: 1:g.247587426G>G | |
| [2024-04-29 13:21:12,133] {utils.py:315} DEBUG - 2024-04-29 13:21:12 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.247588106G>G;Error from VEP for: 1:g.247588106G>G | |
| [2024-04-29 13:21:12,682] {utils.py:315} DEBUG - 2024-04-29 13:21:12 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.247611982C>C;Error from VEP for: 1:g.247611982C>C | |
| [2024-04-29 13:21:12,682] {utils.py:315} DEBUG - 2024-04-29 13:21:12 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.248263058_248263061delinsCTCT;Error from VEP for: 1:g.248263058_248263061delinsCTCT | |
| [2024-04-29 13:21:12,682] {utils.py:315} DEBUG - 2024-04-29 13:21:12 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 1:g.248263376A>A;Error from VEP for: 1:g.248263376A>A | |
| [2024-04-29 13:21:12,682] {utils.py:315} DEBUG - 2024-04-29 13:21:12 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 10:g.415538C>C;Error from VEP for: 10:g.415538C>C | |
| [2024-04-29 13:21:12,682] {utils.py:315} DEBUG - 2024-04-29 13:21:12 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 10:g.415672_415691delinsGGCACAGTGCTGGCACCCCA;Error from VEP for: 10:g.415672_415691delinsGGCACAGTGCTGGCACCCCA | |
| [2024-04-29 13:21:12,682] {utils.py:315} DEBUG - 2024-04-29 13:21:12 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 10:g.428447_428448delinsAG;Error from VEP for: 10:g.428447_428448delinsAG | |
| [2024-04-29 13:21:12,682] {utils.py:315} DEBUG - 2024-04-29 13:21:12 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 10:g.1230936G>G;Error from VEP for: 10:g.1230936G>G | |
| [2024-04-29 13:21:12,682] {utils.py:315} DEBUG - 2024-04-29 13:21:12 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 10:g.3822362_3822381delinsCATCACTTCTTGCAAAACGC;Error from VEP for: 10:g.3822362_3822381delinsCATCACTTCTTGCAAAACGC | |
| [2024-04-29 13:21:12,682] {utils.py:315} DEBUG - 2024-04-29 13:21:12 [main] INFO org.cbioportal.annotator.internal.GenomeNexusImpl - On record 6500 out of 116708, annotation 5% complete | |
| [2024-04-29 13:21:12,682] {utils.py:315} DEBUG - 2024-04-29 13:21:12 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 10:g.16960687_16960693delinsTAACCTC;Error from VEP for: 10:g.16960687_16960693delinsTAACCTC | |
| [2024-04-29 13:21:12,682] {utils.py:315} DEBUG - 2024-04-29 13:21:12 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 10:g.16962002_16962008delinsGCTGTAT;Error from VEP for: 10:g.16962002_16962008delinsGCTGTAT | |
| [2024-04-29 13:21:12,682] {utils.py:315} DEBUG - 2024-04-29 13:21:12 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 10:g.16967360A>A;Error from VEP for: 10:g.16967360A>A | |
| [2024-04-29 13:21:12,682] {utils.py:315} DEBUG - 2024-04-29 13:21:12 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 10:g.17032408G>G;Error from VEP for: 10:g.17032408G>G | |
| [2024-04-29 13:21:12,682] {utils.py:315} DEBUG - 2024-04-29 13:21:12 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 10:g.17113940C>C;Error from VEP for: 10:g.17113940C>C | |
| [2024-04-29 13:21:12,682] {utils.py:315} DEBUG - 2024-04-29 13:21:12 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 10:g.17165610A>A;Error from VEP for: 10:g.17165610A>A | |
| [2024-04-29 13:21:13,708] {utils.py:315} DEBUG - 2024-04-29 13:21:12 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 10:g.18828599A>A;Error from VEP for: 10:g.18828599A>A | |
| [2024-04-29 13:21:13,708] {utils.py:315} DEBUG - 2024-04-29 13:21:12 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 10:g.18828670_18828671delinsTT;Error from VEP for: 10:g.18828670_18828671delinsTT | |
| [2024-04-29 13:21:13,708] {utils.py:315} DEBUG - 2024-04-29 13:21:12 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 10:g.18828670_18828675delinsTTTTTT;Error from VEP for: 10:g.18828670_18828675delinsTTTTTT | |
| [2024-04-29 13:21:13,708] {utils.py:315} DEBUG - 2024-04-29 13:21:13 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 10:g.22016857G>G;Error from VEP for: 10:g.22016857G>G | |
| [2024-04-29 13:21:14,601] {utils.py:315} DEBUG - 2024-04-29 13:21:13 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 10:g.22615362T>T;Error from VEP for: 10:g.22615362T>T | |
| [2024-04-29 13:21:14,601] {utils.py:315} DEBUG - 2024-04-29 13:21:13 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 10:g.22825887C>C;Error from VEP for: 10:g.22825887C>C | |
| [2024-04-29 13:21:14,601] {utils.py:315} DEBUG - 2024-04-29 13:21:13 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 10:g.22825887_22825888delinsCC;Error from VEP for: 10:g.22825887_22825888delinsCC | |
| [2024-04-29 13:21:14,601] {utils.py:315} DEBUG - 2024-04-29 13:21:13 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 10:g.22825895_22825897delinsCAA;Error from VEP for: 10:g.22825895_22825897delinsCAA | |
| [2024-04-29 13:21:14,601] {utils.py:315} DEBUG - 2024-04-29 13:21:13 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 10:g.22825897_22825898delinsAC;Error from VEP for: 10:g.22825897_22825898delinsAC | |
| [2024-04-29 13:21:14,601] {utils.py:315} DEBUG - 2024-04-29 13:21:13 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 10:g.22828937T>T;Error from VEP for: 10:g.22828937T>T | |
| [2024-04-29 13:21:14,601] {utils.py:315} DEBUG - 2024-04-29 13:21:13 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 10:g.26241109_26241114delinsACTGAG;Error from VEP for: 10:g.26241109_26241114delinsACTGAG | |
| [2024-04-29 13:21:14,601] {utils.py:315} DEBUG - 2024-04-29 13:21:13 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 10:g.26462760A>A;Error from VEP for: 10:g.26462760A>A | |
| [2024-04-29 13:21:14,601] {utils.py:315} DEBUG - 2024-04-29 13:21:13 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 10:g.26790145_26790152delinsCTGAGATA;Error from VEP for: 10:g.26790145_26790152delinsCTGAGATA | |
| [2024-04-29 13:21:14,601] {utils.py:315} DEBUG - 2024-04-29 13:21:13 [main] INFO org.cbioportal.annotator.internal.GenomeNexusImpl - On record 7000 out of 116708, annotation 5% complete | |
| [2024-04-29 13:21:14,601] {utils.py:315} DEBUG - 2024-04-29 13:21:13 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 10:g.26830671T>T;Error from VEP for: 10:g.26830671T>T | |
| [2024-04-29 13:21:14,601] {utils.py:315} DEBUG - 2024-04-29 13:21:13 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 10:g.27037488A>A;Error from VEP for: 10:g.27037488A>A | |
| [2024-04-29 13:21:14,601] {utils.py:315} DEBUG - 2024-04-29 13:21:13 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 10:g.27037488_27037489delinsAA;Error from VEP for: 10:g.27037488_27037489delinsAA | |
| [2024-04-29 13:21:14,601] {utils.py:315} DEBUG - 2024-04-29 13:21:13 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 10:g.27040624_27040626delinsTGG;Error from VEP for: 10:g.27040624_27040626delinsTGG | |
| [2024-04-29 13:21:14,601] {utils.py:315} DEBUG - 2024-04-29 13:21:13 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 10:g.27044586T>T;Error from VEP for: 10:g.27044586T>T | |
| [2024-04-29 13:21:14,601] {utils.py:315} DEBUG - 2024-04-29 13:21:13 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 10:g.27044652G>G;Error from VEP for: 10:g.27044652G>G | |
| [2024-04-29 13:21:14,601] {utils.py:315} DEBUG - 2024-04-29 13:21:13 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 10:g.27057885T>T;Error from VEP for: 10:g.27057885T>T | |
| [2024-04-29 13:21:14,601] {utils.py:315} DEBUG - 2024-04-29 13:21:13 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 10:g.27447484A>A;Error from VEP for: 10:g.27447484A>A | |
| [2024-04-29 13:21:14,601] {utils.py:315} DEBUG - 2024-04-29 13:21:13 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 10:g.27447580_27447582delinsTAT;Error from VEP for: 10:g.27447580_27447582delinsTAT | |
| [2024-04-29 13:21:14,601] {utils.py:315} DEBUG - 2024-04-29 13:21:13 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 10:g.27454334A>A;Error from VEP for: 10:g.27454334A>A | |
| [2024-04-29 13:21:14,601] {utils.py:315} DEBUG - 2024-04-29 13:21:13 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 10:g.27458899_27458913delinsAATGATGAGTTGGAA;Error from VEP for: 10:g.27458899_27458913delinsAATGATGAGTTGGAA | |
| [2024-04-29 13:21:14,602] {utils.py:315} DEBUG - 2024-04-29 13:21:13 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 10:g.27459056A>A;Error from VEP for: 10:g.27459056A>A | |
| [2024-04-29 13:21:14,602] {utils.py:315} DEBUG - 2024-04-29 13:21:13 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 10:g.27459254A>A;Error from VEP for: 10:g.27459254A>A | |
| [2024-04-29 13:21:14,602] {utils.py:315} DEBUG - 2024-04-29 13:21:13 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 10:g.27459658_27459663delinsAGATAG;Error from VEP for: 10:g.27459658_27459663delinsAGATAG | |
| [2024-04-29 13:21:14,602] {utils.py:315} DEBUG - 2024-04-29 13:21:13 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 10:g.33190399_33190400delinsAT;Error from VEP for: 10:g.33190399_33190400delinsAT | |
| [2024-04-29 13:21:14,602] {utils.py:315} DEBUG - 2024-04-29 13:21:13 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 10:g.33197131_33197134delinsCTTT;Error from VEP for: 10:g.33197131_33197134delinsCTTT | |
| [2024-04-29 13:21:14,602] {utils.py:315} DEBUG - 2024-04-29 13:21:14 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 10:g.33197131_33197134delinsCTTT;Error from VEP for: 10:g.33197131_33197134delinsCTTT | |
| [2024-04-29 13:21:15,850] {utils.py:315} DEBUG - 2024-04-29 13:21:14 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 10:g.49643174A>A;Error from VEP for: 10:g.49643174A>A | |
| [2024-04-29 13:21:15,850] {utils.py:315} DEBUG - 2024-04-29 13:21:14 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 10:g.50681033G>G;Error from VEP for: 10:g.50681033G>G | |
| [2024-04-29 13:21:15,850] {utils.py:315} DEBUG - 2024-04-29 13:21:14 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 10:g.50690758C>C;Error from VEP for: 10:g.50690758C>C | |
| [2024-04-29 13:21:15,850] {utils.py:315} DEBUG - 2024-04-29 13:21:14 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 10:g.50701164T>T;Error from VEP for: 10:g.50701164T>T | |
| [2024-04-29 13:21:15,850] {utils.py:315} DEBUG - 2024-04-29 13:21:14 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 10:g.50713805T>T;Error from VEP for: 10:g.50713805T>T | |
| [2024-04-29 13:21:15,850] {utils.py:315} DEBUG - 2024-04-29 13:21:15 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 10:g.50732547T>T;Error from VEP for: 10:g.50732547T>T | |
| [2024-04-29 13:21:16,922] {utils.py:315} DEBUG - 2024-04-29 13:21:15 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 10:g.50736555T>T;Error from VEP for: 10:g.50736555T>T | |
| [2024-04-29 13:21:16,922] {utils.py:315} DEBUG - 2024-04-29 13:21:15 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 10:g.51589331_51589335delinsTTAGC;Error from VEP for: 10:g.51589331_51589335delinsTTAGC | |
| [2024-04-29 13:21:16,922] {utils.py:315} DEBUG - 2024-04-29 13:21:15 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 10:g.51589340_51589342delinsTTC;Error from VEP for: 10:g.51589340_51589342delinsTTC | |
| [2024-04-29 13:21:16,922] {utils.py:315} DEBUG - 2024-04-29 13:21:15 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 10:g.52751071_52751079delinsGCCGCCGCC;Error from VEP for: 10:g.52751071_52751079delinsGCCGCCGCC | |
| [2024-04-29 13:21:16,922] {utils.py:315} DEBUG - 2024-04-29 13:21:15 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 10:g.54041963T>T;Error from VEP for: 10:g.54041963T>T | |
| [2024-04-29 13:21:16,922] {utils.py:315} DEBUG - 2024-04-29 13:21:15 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 10:g.55581491A>A;Error from VEP for: 10:g.55581491A>A | |
| [2024-04-29 13:21:16,922] {utils.py:315} DEBUG - 2024-04-29 13:21:15 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 10:g.55581645_55581648delinsTTGT;Error from VEP for: 10:g.55581645_55581648delinsTTGT | |
| [2024-04-29 13:21:16,922] {utils.py:315} DEBUG - 2024-04-29 13:21:15 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 10:g.55581883_55581885delinsGTT;Error from VEP for: 10:g.55581883_55581885delinsGTT | |
| [2024-04-29 13:21:16,922] {utils.py:315} DEBUG - 2024-04-29 13:21:15 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 10:g.55582178_55582204delinsCAGGAGGAGGAGCAAGAGGAGCAGGAG;Error from VEP for: 10:g.55582178_55582204delinsCAGGAGGAGGAGCAAGAGGAGCAGGAG | |
| [2024-04-29 13:21:16,922] {utils.py:315} DEBUG - 2024-04-29 13:21:15 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 10:g.55582184_55582192delinsGAGGAGCAA;Error from VEP for: 10:g.55582184_55582192delinsGAGGAGCAA | |
| [2024-04-29 13:21:16,922] {utils.py:315} DEBUG - 2024-04-29 13:21:15 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 10:g.55582194_55582199delinsAGGAGC;Error from VEP for: 10:g.55582194_55582199delinsAGGAGC | |
| [2024-04-29 13:21:16,922] {utils.py:315} DEBUG - 2024-04-29 13:21:15 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 10:g.55582230_55582232delinsAGG;Error from VEP for: 10:g.55582230_55582232delinsAGG | |
| [2024-04-29 13:21:16,922] {utils.py:315} DEBUG - 2024-04-29 13:21:15 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 10:g.55587198_55587200delinsGGC;Error from VEP for: 10:g.55587198_55587200delinsGGC | |
| [2024-04-29 13:21:16,922] {utils.py:315} DEBUG - 2024-04-29 13:21:15 [main] INFO org.cbioportal.annotator.internal.GenomeNexusImpl - On record 7500 out of 116708, annotation 6% complete | |
| [2024-04-29 13:21:16,922] {utils.py:315} DEBUG - 2024-04-29 13:21:15 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 10:g.55782957C>C;Error from VEP for: 10:g.55782957C>C | |
| [2024-04-29 13:21:16,922] {utils.py:315} DEBUG - 2024-04-29 13:21:15 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 10:g.55913017C>C;Error from VEP for: 10:g.55913017C>C | |
| [2024-04-29 13:21:16,922] {utils.py:315} DEBUG - 2024-04-29 13:21:15 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 10:g.55973727_55973728delinsTC;Error from VEP for: 10:g.55973727_55973728delinsTC | |
| [2024-04-29 13:21:16,922] {utils.py:315} DEBUG - 2024-04-29 13:21:15 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 10:g.69648795A>A;Error from VEP for: 10:g.69648795A>A | |
| [2024-04-29 13:21:16,922] {utils.py:315} DEBUG - 2024-04-29 13:21:15 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 10:g.69648852A>A;Error from VEP for: 10:g.69648852A>A | |
| [2024-04-29 13:21:16,922] {utils.py:315} DEBUG - 2024-04-29 13:21:15 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 10:g.69676381C>C;Error from VEP for: 10:g.69676381C>C | |
| [2024-04-29 13:21:16,922] {utils.py:315} DEBUG - 2024-04-29 13:21:15 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 10:g.69676559_69676560delinsTA;Error from VEP for: 10:g.69676559_69676560delinsTA | |
| [2024-04-29 13:21:16,922] {utils.py:315} DEBUG - 2024-04-29 13:21:15 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 10:g.69676559_69676561delinsTAA;Error from VEP for: 10:g.69676559_69676561delinsTAA | |
| [2024-04-29 13:21:16,922] {utils.py:315} DEBUG - 2024-04-29 13:21:15 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 10:g.69676560A>A;Error from VEP for: 10:g.69676560A>A | |
| [2024-04-29 13:21:16,922] {utils.py:315} DEBUG - 2024-04-29 13:21:15 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 10:g.70332153A>A;Error from VEP for: 10:g.70332153A>A | |
| [2024-04-29 13:21:16,922] {utils.py:315} DEBUG - 2024-04-29 13:21:16 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 10:g.70426807A>A;Error from VEP for: 10:g.70426807A>A | |
| [2024-04-29 13:21:18,583] {utils.py:315} DEBUG - 2024-04-29 13:21:16 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 10:g.70441157A>A;Error from VEP for: 10:g.70441157A>A | |
| [2024-04-29 13:21:18,583] {utils.py:315} DEBUG - 2024-04-29 13:21:16 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 10:g.70451582C>C;Error from VEP for: 10:g.70451582C>C | |
| [2024-04-29 13:21:18,583] {utils.py:315} DEBUG - 2024-04-29 13:21:16 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 10:g.75198049_75198050delinsGT;Error from VEP for: 10:g.75198049_75198050delinsGT | |
| [2024-04-29 13:21:18,583] {utils.py:315} DEBUG - 2024-04-29 13:21:16 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 10:g.75204379A>A;Error from VEP for: 10:g.75204379A>A | |
| [2024-04-29 13:21:18,583] {utils.py:315} DEBUG - 2024-04-29 13:21:16 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 10:g.76429988_76429990delinsATT;Error from VEP for: 10:g.76429988_76429990delinsATT | |
| [2024-04-29 13:21:18,583] {utils.py:315} DEBUG - 2024-04-29 13:21:16 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 10:g.76736014C>C;Error from VEP for: 10:g.76736014C>C | |
| [2024-04-29 13:21:18,583] {utils.py:315} DEBUG - 2024-04-29 13:21:16 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 10:g.76744869A>A;Error from VEP for: 10:g.76744869A>A | |
| [2024-04-29 13:21:18,583] {utils.py:315} DEBUG - 2024-04-29 13:21:16 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 10:g.76744938T>T;Error from VEP for: 10:g.76744938T>T | |
| [2024-04-29 13:21:18,583] {utils.py:315} DEBUG - 2024-04-29 13:21:16 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 10:g.76781837_76781848delinsGAGGAGGAGGAC;Error from VEP for: 10:g.76781837_76781848delinsGAGGAGGAGGAC | |
| [2024-04-29 13:21:18,583] {utils.py:315} DEBUG - 2024-04-29 13:21:16 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 10:g.76781852_76781863delinsGAGGAGGAAGAA;Error from VEP for: 10:g.76781852_76781863delinsGAGGAGGAAGAA | |
| [2024-04-29 13:21:18,583] {utils.py:315} DEBUG - 2024-04-29 13:21:16 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 10:g.76781906_76781908delinsGAA;Error from VEP for: 10:g.76781906_76781908delinsGAA | |
| [2024-04-29 13:21:18,583] {utils.py:315} DEBUG - 2024-04-29 13:21:16 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 10:g.76788645_76788647delinsGAG;Error from VEP for: 10:g.76788645_76788647delinsGAG | |
| [2024-04-29 13:21:18,583] {utils.py:315} DEBUG - 2024-04-29 13:21:16 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 10:g.76788645_76788650delinsGAGGAG;Error from VEP for: 10:g.76788645_76788650delinsGAGGAG | |
| [2024-04-29 13:21:18,583] {utils.py:315} DEBUG - 2024-04-29 13:21:16 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 10:g.76788660_76788668delinsGAAGAGGAA;Error from VEP for: 10:g.76788660_76788668delinsGAAGAGGAA | |
| [2024-04-29 13:21:18,583] {utils.py:315} DEBUG - 2024-04-29 13:21:16 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 10:g.76789970_76789975delinsGCGAAT;Error from VEP for: 10:g.76789970_76789975delinsGCGAAT | |
| [2024-04-29 13:21:18,583] {utils.py:315} DEBUG - 2024-04-29 13:21:16 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 10:g.76790894A>A;Error from VEP for: 10:g.76790894A>A | |
| [2024-04-29 13:21:18,583] {utils.py:315} DEBUG - 2024-04-29 13:21:16 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 10:g.76790933T>T;Error from VEP for: 10:g.76790933T>T | |
| [2024-04-29 13:21:18,583] {utils.py:315} DEBUG - 2024-04-29 13:21:16 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 10:g.76790936A>A;Error from VEP for: 10:g.76790936A>A | |
| [2024-04-29 13:21:18,583] {utils.py:315} DEBUG - 2024-04-29 13:21:16 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 10:g.76790936_76790937delinsAA;Error from VEP for: 10:g.76790936_76790937delinsAA | |
| [2024-04-29 13:21:18,583] {utils.py:315} DEBUG - 2024-04-29 13:21:16 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 10:g.76790936_76790938delinsAAA;Error from VEP for: 10:g.76790936_76790938delinsAAA | |
| [2024-04-29 13:21:18,583] {utils.py:315} DEBUG - 2024-04-29 13:21:16 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 10:g.88649922T>T;Error from VEP for: 10:g.88649922T>T | |
| [2024-04-29 13:21:18,583] {utils.py:315} DEBUG - 2024-04-29 13:21:16 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 10:g.88659632C>C;Error from VEP for: 10:g.88659632C>C | |
| [2024-04-29 13:21:18,583] {utils.py:315} DEBUG - 2024-04-29 13:21:18 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 10:g.88683519_88683521delinsTTT;Error from VEP for: 10:g.88683519_88683521delinsTTT | |
| [2024-04-29 13:21:19,815] {utils.py:315} DEBUG - 2024-04-29 13:21:18 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 10:g.89624242_89624243delinsAA;Error from VEP for: 10:g.89624242_89624243delinsAA | |
| [2024-04-29 13:21:19,816] {utils.py:315} DEBUG - 2024-04-29 13:21:18 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 10:g.89653796_89653798delinsATT;Error from VEP for: 10:g.89653796_89653798delinsATT | |
| [2024-04-29 13:21:19,816] {utils.py:315} DEBUG - 2024-04-29 13:21:18 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 10:g.89653844_89653846delinsAAC;Error from VEP for: 10:g.89653844_89653846delinsAAC | |
| [2024-04-29 13:21:19,816] {utils.py:315} DEBUG - 2024-04-29 13:21:18 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 10:g.89690819_89690820delinsTA;Error from VEP for: 10:g.89690819_89690820delinsTA | |
| [2024-04-29 13:21:19,816] {utils.py:315} DEBUG - 2024-04-29 13:21:18 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 10:g.89692783T>T;Error from VEP for: 10:g.89692783T>T | |
| [2024-04-29 13:21:19,816] {utils.py:315} DEBUG - 2024-04-29 13:21:18 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 10:g.89692826T>T;Error from VEP for: 10:g.89692826T>T | |
| [2024-04-29 13:21:19,816] {utils.py:315} DEBUG - 2024-04-29 13:21:18 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 10:g.89692896_89692904delinsGAAAGGGAC;Error from VEP for: 10:g.89692896_89692904delinsGAAAGGGAC | |
| [2024-04-29 13:21:19,816] {utils.py:315} DEBUG - 2024-04-29 13:21:18 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 10:g.89692905G>G;Error from VEP for: 10:g.89692905G>G | |
| [2024-04-29 13:21:19,816] {utils.py:315} DEBUG - 2024-04-29 13:21:18 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 10:g.89692941G>G;Error from VEP for: 10:g.89692941G>G | |
| [2024-04-29 13:21:19,816] {utils.py:315} DEBUG - 2024-04-29 13:21:18 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 10:g.89693003A>A;Error from VEP for: 10:g.89693003A>A | |
| [2024-04-29 13:21:19,816] {utils.py:315} DEBUG - 2024-04-29 13:21:18 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 10:g.89711992C>C;Error from VEP for: 10:g.89711992C>C | |
| [2024-04-29 13:21:19,816] {utils.py:315} DEBUG - 2024-04-29 13:21:18 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 10:g.89712013_89712028delinsTGCAGTAAGTGCTTGA;Error from VEP for: 10:g.89712013_89712028delinsTGCAGTAAGTGCTTGA | |
| [2024-04-29 13:21:19,816] {utils.py:315} DEBUG - 2024-04-29 13:21:18 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 10:g.89717710_89717714delinsGCCGT;Error from VEP for: 10:g.89717710_89717714delinsGCCGT | |
| [2024-04-29 13:21:19,816] {utils.py:315} DEBUG - 2024-04-29 13:21:18 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 10:g.89717770A>A;Error from VEP for: 10:g.89717770A>A | |
| [2024-04-29 13:21:19,816] {utils.py:315} DEBUG - 2024-04-29 13:21:18 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 10:g.89720683_89720686delinsCTTC;Error from VEP for: 10:g.89720683_89720686delinsCTTC | |
| [2024-04-29 13:21:19,816] {utils.py:315} DEBUG - 2024-04-29 13:21:18 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 10:g.89720706C>C;Error from VEP for: 10:g.89720706C>C | |
| [2024-04-29 13:21:19,816] {utils.py:315} DEBUG - 2024-04-29 13:21:18 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 10:g.89720712A>A;Error from VEP for: 10:g.89720712A>A | |
| [2024-04-29 13:21:19,816] {utils.py:315} DEBUG - 2024-04-29 13:21:18 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 10:g.89720799_89720802delinsTACT;Error from VEP for: 10:g.89720799_89720802delinsTACT | |
| [2024-04-29 13:21:19,816] {utils.py:315} DEBUG - 2024-04-29 13:21:18 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 10:g.89720812A>A;Error from VEP for: 10:g.89720812A>A | |
| [2024-04-29 13:21:19,816] {utils.py:315} DEBUG - 2024-04-29 13:21:18 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 10:g.89725231T>T;Error from VEP for: 10:g.89725231T>T | |
| [2024-04-29 13:21:19,816] {utils.py:315} DEBUG - 2024-04-29 13:21:18 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 10:g.89725294T>T;Error from VEP for: 10:g.89725294T>T | |
| [2024-04-29 13:21:19,816] {utils.py:315} DEBUG - 2024-04-29 13:21:18 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 10:g.89725294_89725295delinsTT;Error from VEP for: 10:g.89725294_89725295delinsTT | |
| [2024-04-29 13:21:19,816] {utils.py:315} DEBUG - 2024-04-29 13:21:18 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 10:g.89725305A>A;Error from VEP for: 10:g.89725305A>A | |
| [2024-04-29 13:21:19,816] {utils.py:315} DEBUG - 2024-04-29 13:21:18 [main] INFO org.cbioportal.annotator.internal.GenomeNexusImpl - On record 8000 out of 116708, annotation 6% complete | |
| [2024-04-29 13:21:19,816] {utils.py:315} DEBUG - 2024-04-29 13:21:18 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 10:g.90768708T>T;Error from VEP for: 10:g.90768708T>T | |
| [2024-04-29 13:21:19,816] {utils.py:315} DEBUG - 2024-04-29 13:21:18 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 10:g.90773879_90773883delinsTTGAC;Error from VEP for: 10:g.90773879_90773883delinsTTGAC | |
| [2024-04-29 13:21:19,816] {utils.py:315} DEBUG - 2024-04-29 13:21:18 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 10:g.93601946A>A;Error from VEP for: 10:g.93601946A>A | |
| [2024-04-29 13:21:19,816] {utils.py:315} DEBUG - 2024-04-29 13:21:18 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 10:g.93621902_93621904delinsGAG;Error from VEP for: 10:g.93621902_93621904delinsGAG | |
| [2024-04-29 13:21:19,816] {utils.py:315} DEBUG - 2024-04-29 13:21:18 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 10:g.93622951_93622959delinsGTTTTTTCA;Error from VEP for: 10:g.93622951_93622959delinsGTTTTTTCA | |
| [2024-04-29 13:21:19,816] {utils.py:315} DEBUG - 2024-04-29 13:21:18 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 10:g.97951715T>T;Error from VEP for: 10:g.97951715T>T | |
| [2024-04-29 13:21:19,816] {utils.py:315} DEBUG - 2024-04-29 13:21:18 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 10:g.99080247T>T;Error from VEP for: 10:g.99080247T>T | |
| [2024-04-29 13:21:19,816] {utils.py:315} DEBUG - 2024-04-29 13:21:18 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 10:g.101980369_101980370delinsTA;Error from VEP for: 10:g.101980369_101980370delinsTA | |
| [2024-04-29 13:21:19,816] {utils.py:315} DEBUG - 2024-04-29 13:21:18 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 10:g.103285822_103285827delinsATCACT;Error from VEP for: 10:g.103285822_103285827delinsATCACT | |
| [2024-04-29 13:21:19,816] {utils.py:315} DEBUG - 2024-04-29 13:21:18 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 10:g.103310573C>C;Error from VEP for: 10:g.103310573C>C | |
| [2024-04-29 13:21:19,816] {utils.py:315} DEBUG - 2024-04-29 13:21:18 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 10:g.104155612C>C;Error from VEP for: 10:g.104155612C>C | |
| [2024-04-29 13:21:19,816] {utils.py:315} DEBUG - 2024-04-29 13:21:18 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 10:g.104590294A>A;Error from VEP for: 10:g.104590294A>A | |
| [2024-04-29 13:21:19,816] {utils.py:315} DEBUG - 2024-04-29 13:21:19 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 10:g.104590294A>A;Error from VEP for: 10:g.104590294A>A | |
| [2024-04-29 13:21:20,817] {utils.py:315} DEBUG - 2024-04-29 13:21:19 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 10:g.104592290G>G;Error from VEP for: 10:g.104592290G>G | |
| [2024-04-29 13:21:20,817] {utils.py:315} DEBUG - 2024-04-29 13:21:19 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 10:g.104594667_104594669delinsAGG;Error from VEP for: 10:g.104594667_104594669delinsAGG | |
| [2024-04-29 13:21:20,817] {utils.py:315} DEBUG - 2024-04-29 13:21:19 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 10:g.104596942T>T;Error from VEP for: 10:g.104596942T>T | |
| [2024-04-29 13:21:20,817] {utils.py:315} DEBUG - 2024-04-29 13:21:19 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 10:g.105158207C>C;Error from VEP for: 10:g.105158207C>C | |
| [2024-04-29 13:21:20,817] {utils.py:315} DEBUG - 2024-04-29 13:21:19 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 10:g.105166438_105166441delinsGTCT;Error from VEP for: 10:g.105166438_105166441delinsGTCT | |
| [2024-04-29 13:21:20,817] {utils.py:315} DEBUG - 2024-04-29 13:21:19 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 10:g.105176293A>A;Error from VEP for: 10:g.105176293A>A | |
| [2024-04-29 13:21:20,817] {utils.py:315} DEBUG - 2024-04-29 13:21:19 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 10:g.105762529G>G;Error from VEP for: 10:g.105762529G>G | |
| [2024-04-29 13:21:20,817] {utils.py:315} DEBUG - 2024-04-29 13:21:19 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 10:g.105762994_105762996delinsTCC;Error from VEP for: 10:g.105762994_105762996delinsTCC | |
| [2024-04-29 13:21:20,817] {utils.py:315} DEBUG - 2024-04-29 13:21:19 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 10:g.105785610T>T;Error from VEP for: 10:g.105785610T>T | |
| [2024-04-29 13:21:20,817] {utils.py:315} DEBUG - 2024-04-29 13:21:19 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 10:g.115489357T>T;Error from VEP for: 10:g.115489357T>T | |
| [2024-04-29 13:21:20,817] {utils.py:315} DEBUG - 2024-04-29 13:21:19 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 10:g.115489477T>T;Error from VEP for: 10:g.115489477T>T | |
| [2024-04-29 13:21:20,817] {utils.py:315} DEBUG - 2024-04-29 13:21:19 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 10:g.120809481_120809482delinsCT;Error from VEP for: 10:g.120809481_120809482delinsCT | |
| [2024-04-29 13:21:20,817] {utils.py:315} DEBUG - 2024-04-29 13:21:19 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 10:g.121086027G>G;Error from VEP for: 10:g.121086027G>G | |
| [2024-04-29 13:21:20,818] {utils.py:315} DEBUG - 2024-04-29 13:21:19 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 10:g.123239376T>T;Error from VEP for: 10:g.123239376T>T | |
| [2024-04-29 13:21:20,818] {utils.py:315} DEBUG - 2024-04-29 13:21:19 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 10:g.123276801A>A;Error from VEP for: 10:g.123276801A>A | |
| [2024-04-29 13:21:20,818] {utils.py:315} DEBUG - 2024-04-29 13:21:19 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 10:g.126678123T>T;Error from VEP for: 10:g.126678123T>T | |
| [2024-04-29 13:21:20,818] {utils.py:315} DEBUG - 2024-04-29 13:21:20 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 10:g.126678123T>T;Error from VEP for: 10:g.126678123T>T | |
| [2024-04-29 13:21:21,712] {utils.py:315} DEBUG - 2024-04-29 13:21:20 [main] INFO org.cbioportal.annotator.internal.GenomeNexusImpl - On record 8500 out of 116708, annotation 7% complete | |
| [2024-04-29 13:21:21,712] {utils.py:315} DEBUG - 2024-04-29 13:21:20 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 10:g.126715804_126715805delinsCT;Error from VEP for: 10:g.126715804_126715805delinsCT | |
| [2024-04-29 13:21:21,712] {utils.py:315} DEBUG - 2024-04-29 13:21:20 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 10:g.126715971C>C;Error from VEP for: 10:g.126715971C>C | |
| [2024-04-29 13:21:21,712] {utils.py:315} DEBUG - 2024-04-29 13:21:20 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 10:g.127705654_127705655delinsAA;Error from VEP for: 10:g.127705654_127705655delinsAA | |
| [2024-04-29 13:21:21,712] {utils.py:315} DEBUG - 2024-04-29 13:21:20 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 10:g.127705753A>A;Error from VEP for: 10:g.127705753A>A | |
| [2024-04-29 13:21:21,712] {utils.py:315} DEBUG - 2024-04-29 13:21:20 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 10:g.127806699T>T;Error from VEP for: 10:g.127806699T>T | |
| [2024-04-29 13:21:21,712] {utils.py:315} DEBUG - 2024-04-29 13:21:20 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 10:g.127843846T>T;Error from VEP for: 10:g.127843846T>T | |
| [2024-04-29 13:21:21,712] {utils.py:315} DEBUG - 2024-04-29 13:21:20 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 10:g.132891378G>G;Error from VEP for: 10:g.132891378G>G | |
| [2024-04-29 13:21:21,712] {utils.py:315} DEBUG - 2024-04-29 13:21:20 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 10:g.132915126G>G;Error from VEP for: 10:g.132915126G>G | |
| [2024-04-29 13:21:21,712] {utils.py:315} DEBUG - 2024-04-29 13:21:20 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 10:g.132915153T>T;Error from VEP for: 10:g.132915153T>T | |
| [2024-04-29 13:21:21,712] {utils.py:315} DEBUG - 2024-04-29 13:21:20 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 11:g.280723C>C;Error from VEP for: 11:g.280723C>C | |
| [2024-04-29 13:21:21,712] {utils.py:315} DEBUG - 2024-04-29 13:21:20 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 11:g.281700G>G;Error from VEP for: 11:g.281700G>G | |
| [2024-04-29 13:21:21,712] {utils.py:315} DEBUG - 2024-04-29 13:21:20 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 11:g.281785_281787delinsAGA;Error from VEP for: 11:g.281785_281787delinsAGA | |
| [2024-04-29 13:21:21,712] {utils.py:315} DEBUG - 2024-04-29 13:21:20 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 11:g.1466880C>C;Error from VEP for: 11:g.1466880C>C | |
| [2024-04-29 13:21:21,712] {utils.py:315} DEBUG - 2024-04-29 13:21:20 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 11:g.1477640G>G;Error from VEP for: 11:g.1477640G>G | |
| [2024-04-29 13:21:21,712] {utils.py:315} DEBUG - 2024-04-29 13:21:20 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 11:g.1481963C>C;Error from VEP for: 11:g.1481963C>C | |
| [2024-04-29 13:21:21,712] {utils.py:315} DEBUG - 2024-04-29 13:21:20 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 11:g.3704637G>G;Error from VEP for: 11:g.3704637G>G | |
| [2024-04-29 13:21:21,712] {utils.py:315} DEBUG - 2024-04-29 13:21:20 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 11:g.3720389T>T;Error from VEP for: 11:g.3720389T>T | |
| [2024-04-29 13:21:21,712] {utils.py:315} DEBUG - 2024-04-29 13:21:20 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 11:g.3720492G>G;Error from VEP for: 11:g.3720492G>G | |
| [2024-04-29 13:21:21,712] {utils.py:315} DEBUG - 2024-04-29 13:21:20 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 11:g.3733612_3733618delinsAGTAAAA;Error from VEP for: 11:g.3733612_3733618delinsAGTAAAA | |
| [2024-04-29 13:21:21,712] {utils.py:315} DEBUG - 2024-04-29 13:21:20 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 11:g.3733905_3733907delinsCTC;Error from VEP for: 11:g.3733905_3733907delinsCTC | |
| [2024-04-29 13:21:21,712] {utils.py:315} DEBUG - 2024-04-29 13:21:20 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 11:g.3789829_3789830delinsCT;Error from VEP for: 11:g.3789829_3789830delinsCT | |
| [2024-04-29 13:21:21,712] {utils.py:315} DEBUG - 2024-04-29 13:21:20 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 11:g.5255759C>C;Error from VEP for: 11:g.5255759C>C | |
| [2024-04-29 13:21:21,712] {utils.py:315} DEBUG - 2024-04-29 13:21:20 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 11:g.6629392C>C;Error from VEP for: 11:g.6629392C>C | |
| [2024-04-29 13:21:21,712] {utils.py:315} DEBUG - 2024-04-29 13:21:20 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 11:g.6630029C>C;Error from VEP for: 11:g.6630029C>C | |
| [2024-04-29 13:21:21,712] {utils.py:315} DEBUG - 2024-04-29 13:21:21 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 11:g.6630029C>C;Error from VEP for: 11:g.6630029C>C | |
| [2024-04-29 13:21:22,116] {utils.py:315} DEBUG - 2024-04-29 13:21:22 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 11:g.6630029C>C;Error from VEP for: 11:g.6630029C>C | |
| [2024-04-29 13:21:22,116] {utils.py:315} DEBUG - 2024-04-29 13:21:22 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 11:g.7981233T>T;Error from VEP for: 11:g.7981233T>T | |
| [2024-04-29 13:21:22,116] {utils.py:315} DEBUG - 2024-04-29 13:21:22 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 11:g.7981284_7981286delinsCTT;Error from VEP for: 11:g.7981284_7981286delinsCTT | |
| [2024-04-29 13:21:22,116] {utils.py:315} DEBUG - 2024-04-29 13:21:22 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 11:g.8435224_8435227delinsAAGA;Error from VEP for: 11:g.8435224_8435227delinsAAGA | |
| [2024-04-29 13:21:23,524] {utils.py:315} DEBUG - 2024-04-29 13:21:22 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 11:g.8476297_8476302delinsGTTTAA;Error from VEP for: 11:g.8476297_8476302delinsGTTTAA | |
| [2024-04-29 13:21:23,524] {utils.py:315} DEBUG - 2024-04-29 13:21:22 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 11:g.17111198_17111199delinsGT;Error from VEP for: 11:g.17111198_17111199delinsGT | |
| [2024-04-29 13:21:23,524] {utils.py:315} DEBUG - 2024-04-29 13:21:23 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 11:g.17111198_17111199delinsGT;Error from VEP for: 11:g.17111198_17111199delinsGT | |
| [2024-04-29 13:21:24,498] {utils.py:315} DEBUG - 2024-04-29 13:21:23 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 11:g.17111213_17111214delinsTC;Error from VEP for: 11:g.17111213_17111214delinsTC | |
| [2024-04-29 13:21:24,498] {utils.py:315} DEBUG - 2024-04-29 13:21:23 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 11:g.17111215_17111216delinsTG;Error from VEP for: 11:g.17111215_17111216delinsTG | |
| [2024-04-29 13:21:24,498] {utils.py:315} DEBUG - 2024-04-29 13:21:23 [main] INFO org.cbioportal.annotator.internal.GenomeNexusImpl - On record 9000 out of 116708, annotation 7% complete | |
| [2024-04-29 13:21:24,498] {utils.py:315} DEBUG - 2024-04-29 13:21:23 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 11:g.17156697_17156699delinsAAG;Error from VEP for: 11:g.17156697_17156699delinsAAG | |
| [2024-04-29 13:21:24,498] {utils.py:315} DEBUG - 2024-04-29 13:21:23 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 11:g.17190379A>A;Error from VEP for: 11:g.17190379A>A | |
| [2024-04-29 13:21:24,498] {utils.py:315} DEBUG - 2024-04-29 13:21:23 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 11:g.17190949T>T;Error from VEP for: 11:g.17190949T>T | |
| [2024-04-29 13:21:24,498] {utils.py:315} DEBUG - 2024-04-29 13:21:23 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 11:g.18042322A>A;Error from VEP for: 11:g.18042322A>A | |
| [2024-04-29 13:21:24,498] {utils.py:315} DEBUG - 2024-04-29 13:21:23 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 11:g.18054822G>G;Error from VEP for: 11:g.18054822G>G | |
| [2024-04-29 13:21:24,498] {utils.py:315} DEBUG - 2024-04-29 13:21:23 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 11:g.18418516_18418519delinsGTAA;Error from VEP for: 11:g.18418516_18418519delinsGTAA | |
| [2024-04-29 13:21:24,498] {utils.py:315} DEBUG - 2024-04-29 13:21:23 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 11:g.22646658_22646659delinsCC;Error from VEP for: 11:g.22646658_22646659delinsCC | |
| [2024-04-29 13:21:24,498] {utils.py:315} DEBUG - 2024-04-29 13:21:23 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 11:g.22647190G>G;Error from VEP for: 11:g.22647190G>G | |
| [2024-04-29 13:21:24,498] {utils.py:315} DEBUG - 2024-04-29 13:21:23 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 11:g.22647278C>C;Error from VEP for: 11:g.22647278C>C | |
| [2024-04-29 13:21:24,498] {utils.py:315} DEBUG - 2024-04-29 13:21:23 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 11:g.32410491_32410493delinsGAA;Error from VEP for: 11:g.32410491_32410493delinsGAA | |
| [2024-04-29 13:21:24,498] {utils.py:315} DEBUG - 2024-04-29 13:21:23 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 11:g.32417849_32417850delinsTC;Error from VEP for: 11:g.32417849_32417850delinsTC | |
| [2024-04-29 13:21:24,498] {utils.py:315} DEBUG - 2024-04-29 13:21:23 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 11:g.33886290C>C;Error from VEP for: 11:g.33886290C>C | |
| [2024-04-29 13:21:24,498] {utils.py:315} DEBUG - 2024-04-29 13:21:23 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 11:g.33886331G>G;Error from VEP for: 11:g.33886331G>G | |
| [2024-04-29 13:21:24,498] {utils.py:315} DEBUG - 2024-04-29 13:21:23 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 11:g.36511727A>A;Error from VEP for: 11:g.36511727A>A | |
| [2024-04-29 13:21:24,498] {utils.py:315} DEBUG - 2024-04-29 13:21:23 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 11:g.36597900G>G;Error from VEP for: 11:g.36597900G>G | |
| [2024-04-29 13:21:24,498] {utils.py:315} DEBUG - 2024-04-29 13:21:23 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 11:g.36598115_36598123delinsAGATGCTAC;Error from VEP for: 11:g.36598115_36598123delinsAGATGCTAC | |
| [2024-04-29 13:21:24,498] {utils.py:315} DEBUG - 2024-04-29 13:21:23 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 11:g.47256398_47256401delinsCAAA;Error from VEP for: 11:g.47256398_47256401delinsCAAA | |
| [2024-04-29 13:21:24,498] {utils.py:315} DEBUG - 2024-04-29 13:21:23 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 11:g.47260504A>A;Error from VEP for: 11:g.47260504A>A | |
| [2024-04-29 13:21:24,498] {utils.py:315} DEBUG - 2024-04-29 13:21:23 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 11:g.47282887C>C;Error from VEP for: 11:g.47282887C>C | |
| [2024-04-29 13:21:24,498] {utils.py:315} DEBUG - 2024-04-29 13:21:23 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 11:g.47283104C>C;Error from VEP for: 11:g.47283104C>C | |
| [2024-04-29 13:21:24,498] {utils.py:315} DEBUG - 2024-04-29 13:21:24 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 11:g.58477908_58477909delinsGA;Error from VEP for: 11:g.58477908_58477909delinsGA | |
| [2024-04-29 13:21:25,493] {utils.py:315} DEBUG - 2024-04-29 13:21:24 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 11:g.58477932T>T;Error from VEP for: 11:g.58477932T>T | |
| [2024-04-29 13:21:25,493] {utils.py:315} DEBUG - 2024-04-29 13:21:24 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 11:g.58601858T>T;Error from VEP for: 11:g.58601858T>T | |
| [2024-04-29 13:21:25,493] {utils.py:315} DEBUG - 2024-04-29 13:21:24 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 11:g.58604624T>T;Error from VEP for: 11:g.58604624T>T | |
| [2024-04-29 13:21:25,493] {utils.py:315} DEBUG - 2024-04-29 13:21:24 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 11:g.63667464C>C;Error from VEP for: 11:g.63667464C>C | |
| [2024-04-29 13:21:25,493] {utils.py:315} DEBUG - 2024-04-29 13:21:24 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 11:g.63668057A>A;Error from VEP for: 11:g.63668057A>A | |
| [2024-04-29 13:21:25,493] {utils.py:315} DEBUG - 2024-04-29 13:21:24 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 11:g.63676734G>G;Error from VEP for: 11:g.63676734G>G | |
| [2024-04-29 13:21:25,493] {utils.py:315} DEBUG - 2024-04-29 13:21:24 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 11:g.64051892A>A;Error from VEP for: 11:g.64051892A>A | |
| [2024-04-29 13:21:25,494] {utils.py:315} DEBUG - 2024-04-29 13:21:24 [main] INFO org.cbioportal.annotator.internal.GenomeNexusImpl - On record 9500 out of 116708, annotation 8% complete | |
| [2024-04-29 13:21:25,494] {utils.py:315} DEBUG - 2024-04-29 13:21:24 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 11:g.64572093G>G;Error from VEP for: 11:g.64572093G>G | |
| [2024-04-29 13:21:25,494] {utils.py:315} DEBUG - 2024-04-29 13:21:24 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 11:g.64591973A>A;Error from VEP for: 11:g.64591973A>A | |
| [2024-04-29 13:21:25,494] {utils.py:315} DEBUG - 2024-04-29 13:21:24 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 11:g.65306004C>C;Error from VEP for: 11:g.65306004C>C | |
| [2024-04-29 13:21:25,494] {utils.py:315} DEBUG - 2024-04-29 13:21:24 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 11:g.65365835C>C;Error from VEP for: 11:g.65365835C>C | |
| [2024-04-29 13:21:25,494] {utils.py:315} DEBUG - 2024-04-29 13:21:24 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 11:g.65374290G>G;Error from VEP for: 11:g.65374290G>G | |
| [2024-04-29 13:21:25,494] {utils.py:315} DEBUG - 2024-04-29 13:21:24 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 11:g.65423153C>C;Error from VEP for: 11:g.65423153C>C | |
| [2024-04-29 13:21:25,494] {utils.py:315} DEBUG - 2024-04-29 13:21:24 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 11:g.69457951C>C;Error from VEP for: 11:g.69457951C>C | |
| [2024-04-29 13:21:25,494] {utils.py:315} DEBUG - 2024-04-29 13:21:24 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 11:g.71716313G>G;Error from VEP for: 11:g.71716313G>G | |
| [2024-04-29 13:21:25,494] {utils.py:315} DEBUG - 2024-04-29 13:21:24 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 11:g.71718403G>G;Error from VEP for: 11:g.71718403G>G | |
| [2024-04-29 13:21:25,494] {utils.py:315} DEBUG - 2024-04-29 13:21:24 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 11:g.71718530T>T;Error from VEP for: 11:g.71718530T>T | |
| [2024-04-29 13:21:25,494] {utils.py:315} DEBUG - 2024-04-29 13:21:24 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 11:g.71723446_71723448delinsCCT;Error from VEP for: 11:g.71723446_71723448delinsCCT | |
| [2024-04-29 13:21:25,494] {utils.py:315} DEBUG - 2024-04-29 13:21:24 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 11:g.71724001_71724015delinsCTTGGCACCCTCATA;Error from VEP for: 11:g.71724001_71724015delinsCTTGGCACCCTCATA | |
| [2024-04-29 13:21:25,494] {utils.py:315} DEBUG - 2024-04-29 13:21:25 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 11:g.71727573A>A;Error from VEP for: 11:g.71727573A>A | |
| [2024-04-29 13:21:26,679] {utils.py:315} DEBUG - 2024-04-29 13:21:25 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 11:g.71746965C>C;Error from VEP for: 11:g.71746965C>C | |
| [2024-04-29 13:21:26,679] {utils.py:315} DEBUG - 2024-04-29 13:21:25 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 11:g.85779894C>C;Error from VEP for: 11:g.85779894C>C | |
| [2024-04-29 13:21:26,680] {utils.py:315} DEBUG - 2024-04-29 13:21:25 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 11:g.85779899C>C;Error from VEP for: 11:g.85779899C>C | |
| [2024-04-29 13:21:26,680] {utils.py:315} DEBUG - 2024-04-29 13:21:25 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 11:g.94189473T>T;Error from VEP for: 11:g.94189473T>T | |
| [2024-04-29 13:21:26,680] {utils.py:315} DEBUG - 2024-04-29 13:21:25 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 11:g.94192633T>T;Error from VEP for: 11:g.94192633T>T | |
| [2024-04-29 13:21:26,680] {utils.py:315} DEBUG - 2024-04-29 13:21:25 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 11:g.94197308A>A;Error from VEP for: 11:g.94197308A>A | |
| [2024-04-29 13:21:26,680] {utils.py:315} DEBUG - 2024-04-29 13:21:25 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 11:g.94225846C>C;Error from VEP for: 11:g.94225846C>C | |
| [2024-04-29 13:21:26,680] {utils.py:315} DEBUG - 2024-04-29 13:21:25 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 11:g.95825204_95825206delinsTGC;Error from VEP for: 11:g.95825204_95825206delinsTGC | |
| [2024-04-29 13:21:26,680] {utils.py:315} DEBUG - 2024-04-29 13:21:25 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 11:g.95825375_95825383delinsTGCTGCTGC;Error from VEP for: 11:g.95825375_95825383delinsTGCTGCTGC | |
| [2024-04-29 13:21:26,680] {utils.py:315} DEBUG - 2024-04-29 13:21:25 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 11:g.95825375_95825386delinsTGCTGCTGCTGC;Error from VEP for: 11:g.95825375_95825386delinsTGCTGCTGCTGC | |
| [2024-04-29 13:21:26,680] {utils.py:315} DEBUG - 2024-04-29 13:21:25 [main] INFO org.cbioportal.annotator.internal.GenomeNexusImpl - On record 10000 out of 116708, annotation 8% complete | |
| [2024-04-29 13:21:26,680] {utils.py:315} DEBUG - 2024-04-29 13:21:25 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 11:g.96074791_96074798delinsCCAGCTTT;Error from VEP for: 11:g.96074791_96074798delinsCCAGCTTT | |
| [2024-04-29 13:21:26,680] {utils.py:315} DEBUG - 2024-04-29 13:21:25 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 11:g.96075011C>C;Error from VEP for: 11:g.96075011C>C | |
| [2024-04-29 13:21:26,680] {utils.py:315} DEBUG - 2024-04-29 13:21:25 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 11:g.99715627_99715629delinsTAT;Error from VEP for: 11:g.99715627_99715629delinsTAT | |
| [2024-04-29 13:21:26,680] {utils.py:315} DEBUG - 2024-04-29 13:21:25 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 11:g.100179224A>A;Error from VEP for: 11:g.100179224A>A | |
| [2024-04-29 13:21:26,680] {utils.py:315} DEBUG - 2024-04-29 13:21:26 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 11:g.100996755_100996757delinsAAG;Error from VEP for: 11:g.100996755_100996757delinsAAG | |
| [2024-04-29 13:21:27,400] {utils.py:315} DEBUG - 2024-04-29 13:21:26 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 11:g.102100448_102100449delinsAA;Error from VEP for: 11:g.102100448_102100449delinsAA | |
| [2024-04-29 13:21:27,400] {utils.py:315} DEBUG - 2024-04-29 13:21:26 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 11:g.102220640A>A;Error from VEP for: 11:g.102220640A>A | |
| [2024-04-29 13:21:27,400] {utils.py:315} DEBUG - 2024-04-29 13:21:26 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 11:g.102269328A>A;Error from VEP for: 11:g.102269328A>A | |
| [2024-04-29 13:21:27,400] {utils.py:315} DEBUG - 2024-04-29 13:21:26 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 11:g.102269398G>G;Error from VEP for: 11:g.102269398G>G | |
| [2024-04-29 13:21:27,400] {utils.py:315} DEBUG - 2024-04-29 13:21:27 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 11:g.102269398G>G;Error from VEP for: 11:g.102269398G>G | |
| [2024-04-29 13:21:28,685] {utils.py:315} DEBUG - 2024-04-29 13:21:27 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 11:g.102269461G>G;Error from VEP for: 11:g.102269461G>G | |
| [2024-04-29 13:21:28,685] {utils.py:315} DEBUG - 2024-04-29 13:21:27 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 11:g.102592354A>A;Error from VEP for: 11:g.102592354A>A | |
| [2024-04-29 13:21:28,685] {utils.py:315} DEBUG - 2024-04-29 13:21:28 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 11:g.102660993A>A;Error from VEP for: 11:g.102660993A>A | |
| [2024-04-29 13:21:29,111] {utils.py:315} DEBUG - 2024-04-29 13:21:28 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 11:g.102665959A>A;Error from VEP for: 11:g.102665959A>A | |
| [2024-04-29 13:21:29,111] {utils.py:315} DEBUG - 2024-04-29 13:21:28 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 11:g.102667447A>A;Error from VEP for: 11:g.102667447A>A | |
| [2024-04-29 13:21:29,111] {utils.py:315} DEBUG - 2024-04-29 13:21:28 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 11:g.102668914_102668915delinsTA;Error from VEP for: 11:g.102668914_102668915delinsTA | |
| [2024-04-29 13:21:29,111] {utils.py:315} DEBUG - 2024-04-29 13:21:28 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 11:g.104820058_104820066delinsTACTGTGGA;Error from VEP for: 11:g.104820058_104820066delinsTACTGTGGA | |
| [2024-04-29 13:21:29,111] {utils.py:315} DEBUG - 2024-04-29 13:21:28 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 11:g.104822590T>T;Error from VEP for: 11:g.104822590T>T | |
| [2024-04-29 13:21:29,112] {utils.py:315} DEBUG - 2024-04-29 13:21:28 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 11:g.104897720C>C;Error from VEP for: 11:g.104897720C>C | |
| [2024-04-29 13:21:29,112] {utils.py:315} DEBUG - 2024-04-29 13:21:28 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 11:g.104905013C>C;Error from VEP for: 11:g.104905013C>C | |
| [2024-04-29 13:21:29,112] {utils.py:315} DEBUG - 2024-04-29 13:21:28 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 11:g.106810362C>C;Error from VEP for: 11:g.106810362C>C | |
| [2024-04-29 13:21:29,112] {utils.py:315} DEBUG - 2024-04-29 13:21:28 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 11:g.106810372A>A;Error from VEP for: 11:g.106810372A>A | |
| [2024-04-29 13:21:29,112] {utils.py:315} DEBUG - 2024-04-29 13:21:28 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 11:g.106810792A>A;Error from VEP for: 11:g.106810792A>A | |
| [2024-04-29 13:21:29,112] {utils.py:315} DEBUG - 2024-04-29 13:21:28 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 11:g.108032696T>T;Error from VEP for: 11:g.108032696T>T | |
| [2024-04-29 13:21:29,112] {utils.py:315} DEBUG - 2024-04-29 13:21:28 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 11:g.108040773A>A;Error from VEP for: 11:g.108040773A>A | |
| [2024-04-29 13:21:29,112] {utils.py:315} DEBUG - 2024-04-29 13:21:28 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 11:g.108040791A>A;Error from VEP for: 11:g.108040791A>A | |
| [2024-04-29 13:21:29,112] {utils.py:315} DEBUG - 2024-04-29 13:21:28 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 11:g.108043536_108043538delinsAGA;Error from VEP for: 11:g.108043536_108043538delinsAGA | |
| [2024-04-29 13:21:29,112] {utils.py:315} DEBUG - 2024-04-29 13:21:28 [main] INFO org.cbioportal.annotator.internal.GenomeNexusImpl - On record 10500 out of 116708, annotation 8% complete | |
| [2024-04-29 13:21:29,112] {utils.py:315} DEBUG - 2024-04-29 13:21:28 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 11:g.108044069T>T;Error from VEP for: 11:g.108044069T>T | |
| [2024-04-29 13:21:29,112] {utils.py:315} DEBUG - 2024-04-29 13:21:28 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 11:g.108057280T>T;Error from VEP for: 11:g.108057280T>T | |
| [2024-04-29 13:21:29,112] {utils.py:315} DEBUG - 2024-04-29 13:21:28 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 11:g.108155141_108155142delinsAG;Error from VEP for: 11:g.108155141_108155142delinsAG | |
| [2024-04-29 13:21:29,113] {utils.py:315} DEBUG - 2024-04-29 13:21:28 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 11:g.108158206C>C;Error from VEP for: 11:g.108158206C>C | |
| [2024-04-29 13:21:29,113] {utils.py:315} DEBUG - 2024-04-29 13:21:28 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 11:g.108164164A>A;Error from VEP for: 11:g.108164164A>A | |
| [2024-04-29 13:21:29,113] {utils.py:315} DEBUG - 2024-04-29 13:21:28 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 11:g.108172510A>A;Error from VEP for: 11:g.108172510A>A | |
| [2024-04-29 13:21:29,113] {utils.py:315} DEBUG - 2024-04-29 13:21:28 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 11:g.108544239A>A;Error from VEP for: 11:g.108544239A>A | |
| [2024-04-29 13:21:29,113] {utils.py:315} DEBUG - 2024-04-29 13:21:28 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 11:g.108562720A>A;Error from VEP for: 11:g.108562720A>A | |
| [2024-04-29 13:21:29,113] {utils.py:315} DEBUG - 2024-04-29 13:21:28 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 11:g.108564298_108564299delinsAT;Error from VEP for: 11:g.108564298_108564299delinsAT | |
| [2024-04-29 13:21:29,113] {utils.py:315} DEBUG - 2024-04-29 13:21:28 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 11:g.108788635_108788637delinsTGA;Error from VEP for: 11:g.108788635_108788637delinsTGA | |
| [2024-04-29 13:21:29,113] {utils.py:315} DEBUG - 2024-04-29 13:21:28 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 11:g.108788854T>T;Error from VEP for: 11:g.108788854T>T | |
| [2024-04-29 13:21:29,113] {utils.py:315} DEBUG - 2024-04-29 13:21:28 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 11:g.108789020T>T;Error from VEP for: 11:g.108789020T>T | |
| [2024-04-29 13:21:29,113] {utils.py:315} DEBUG - 2024-04-29 13:21:28 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 11:g.111224862_111224865delinsCTAG;Error from VEP for: 11:g.111224862_111224865delinsCTAG | |
| [2024-04-29 13:21:29,113] {utils.py:315} DEBUG - 2024-04-29 13:21:28 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 11:g.111224988A>A;Error from VEP for: 11:g.111224988A>A | |
| [2024-04-29 13:21:29,113] {utils.py:315} DEBUG - 2024-04-29 13:21:28 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 11:g.111491121T>T;Error from VEP for: 11:g.111491121T>T | |
| [2024-04-29 13:21:29,113] {utils.py:315} DEBUG - 2024-04-29 13:21:28 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 11:g.111571668C>C;Error from VEP for: 11:g.111571668C>C | |
| [2024-04-29 13:21:29,113] {utils.py:315} DEBUG - 2024-04-29 13:21:28 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 11:g.111590625_111590651delinsGACCCCGCTCATGCCTTTGAGGCATTT;Error from VEP for: 11:g.111590625_111590651delinsGACCCCGCTCATGCCTTTGAGGCATTT | |
| [2024-04-29 13:21:29,114] {utils.py:315} DEBUG - 2024-04-29 13:21:29 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 11:g.111594989_111594990delinsAG;Error from VEP for: 11:g.111594989_111594990delinsAG | |
| [2024-04-29 13:21:29,451] {utils.py:315} DEBUG - 2024-04-29 13:21:29 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 11:g.111959735_111959738delinsGGCA;Error from VEP for: 11:g.111959735_111959738delinsGGCA | |
| [2024-04-29 13:21:29,451] {utils.py:315} DEBUG - 2024-04-29 13:21:29 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 11:g.112832277G>G;Error from VEP for: 11:g.112832277G>G | |
| [2024-04-29 13:21:29,451] {utils.py:315} DEBUG - 2024-04-29 13:21:29 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 11:g.112832277_112832278delinsGG;Error from VEP for: 11:g.112832277_112832278delinsGG | |
| [2024-04-29 13:21:29,452] {utils.py:315} DEBUG - 2024-04-29 13:21:29 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 11:g.112832340C>C;Error from VEP for: 11:g.112832340C>C | |
| [2024-04-29 13:21:29,775] {utils.py:315} DEBUG - 2024-04-29 13:21:29 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 11:g.112832340C>C;Error from VEP for: 11:g.112832340C>C | |
| [2024-04-29 13:21:32,575] {utils.py:315} DEBUG - 2024-04-29 13:21:32 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 11:g.112832340C>C;Error from VEP for: 11:g.112832340C>C | |
| [2024-04-29 13:21:32,576] {utils.py:315} DEBUG - 2024-04-29 13:21:32 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 11:g.113076861G>G;Error from VEP for: 11:g.113076861G>G | |
| [2024-04-29 13:21:32,576] {utils.py:315} DEBUG - 2024-04-29 13:21:32 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 11:g.113146221_113146222delinsCA;Error from VEP for: 11:g.113146221_113146222delinsCA | |
| [2024-04-29 13:21:32,576] {utils.py:315} DEBUG - 2024-04-29 13:21:32 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 11:g.113265743C>C;Error from VEP for: 11:g.113265743C>C | |
| [2024-04-29 13:21:32,576] {utils.py:315} DEBUG - 2024-04-29 13:21:32 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 11:g.113283333_113283339delinsCCTACGG;Error from VEP for: 11:g.113283333_113283339delinsCCTACGG | |
| [2024-04-29 13:21:34,528] {utils.py:315} DEBUG - 2024-04-29 13:21:32 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 11:g.114121272G>G;Error from VEP for: 11:g.114121272G>G | |
| [2024-04-29 13:21:34,528] {utils.py:315} DEBUG - 2024-04-29 13:21:32 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 11:g.114121371G>G;Error from VEP for: 11:g.114121371G>G | |
| [2024-04-29 13:21:34,528] {utils.py:315} DEBUG - 2024-04-29 13:21:32 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 11:g.114121372A>A;Error from VEP for: 11:g.114121372A>A | |
| [2024-04-29 13:21:34,528] {utils.py:315} DEBUG - 2024-04-29 13:21:32 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 11:g.114121372_114121373delinsAA;Error from VEP for: 11:g.114121372_114121373delinsAA | |
| [2024-04-29 13:21:34,528] {utils.py:315} DEBUG - 2024-04-29 13:21:32 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 11:g.116728999_116729007delinsTGCTGTTGC;Error from VEP for: 11:g.116728999_116729007delinsTGCTGTTGC | |
| [2024-04-29 13:21:34,528] {utils.py:315} DEBUG - 2024-04-29 13:21:32 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 11:g.116729328G>G;Error from VEP for: 11:g.116729328G>G | |
| [2024-04-29 13:21:34,528] {utils.py:315} DEBUG - 2024-04-29 13:21:32 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 11:g.116734419T>T;Error from VEP for: 11:g.116734419T>T | |
| [2024-04-29 13:21:34,528] {utils.py:315} DEBUG - 2024-04-29 13:21:34 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 11:g.116744714G>G;Error from VEP for: 11:g.116744714G>G | |
| [2024-04-29 13:21:34,932] {utils.py:315} DEBUG - 2024-04-29 13:21:34 [main] INFO org.cbioportal.annotator.internal.GenomeNexusImpl - On record 11000 out of 116708, annotation 9% complete | |
| [2024-04-29 13:21:34,932] {utils.py:315} DEBUG - 2024-04-29 13:21:34 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 11:g.117034520A>A;Error from VEP for: 11:g.117034520A>A | |
| [2024-04-29 13:21:34,932] {utils.py:315} DEBUG - 2024-04-29 13:21:34 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 11:g.117038499G>G;Error from VEP for: 11:g.117038499G>G | |
| [2024-04-29 13:21:34,932] {utils.py:315} DEBUG - 2024-04-29 13:21:34 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 11:g.117096653C>C;Error from VEP for: 11:g.117096653C>C | |
| [2024-04-29 13:21:34,932] {utils.py:315} DEBUG - 2024-04-29 13:21:34 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 11:g.117100518G>G;Error from VEP for: 11:g.117100518G>G | |
| [2024-04-29 13:21:34,932] {utils.py:315} DEBUG - 2024-04-29 13:21:34 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 11:g.118343686_118343689delinsGCAA;Error from VEP for: 11:g.118343686_118343689delinsGCAA | |
| [2024-04-29 13:21:34,932] {utils.py:315} DEBUG - 2024-04-29 13:21:34 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 11:g.118344186C>C;Error from VEP for: 11:g.118344186C>C | |
| [2024-04-29 13:21:34,933] {utils.py:315} DEBUG - 2024-04-29 13:21:34 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 11:g.118344494_118344495delinsAG;Error from VEP for: 11:g.118344494_118344495delinsAG | |
| [2024-04-29 13:21:34,933] {utils.py:315} DEBUG - 2024-04-29 13:21:34 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 11:g.118367017C>C;Error from VEP for: 11:g.118367017C>C | |
| [2024-04-29 13:21:34,933] {utils.py:315} DEBUG - 2024-04-29 13:21:34 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 11:g.118375057C>C;Error from VEP for: 11:g.118375057C>C | |
| [2024-04-29 13:21:34,933] {utils.py:315} DEBUG - 2024-04-29 13:21:34 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 11:g.118391565A>A;Error from VEP for: 11:g.118391565A>A | |
| [2024-04-29 13:21:34,933] {utils.py:315} DEBUG - 2024-04-29 13:21:34 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 11:g.118629614G>G;Error from VEP for: 11:g.118629614G>G | |
| [2024-04-29 13:21:34,933] {utils.py:315} DEBUG - 2024-04-29 13:21:34 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 11:g.119077179G>G;Error from VEP for: 11:g.119077179G>G | |
| [2024-04-29 13:21:34,933] {utils.py:315} DEBUG - 2024-04-29 13:21:34 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 11:g.119149006_119149019delinsAGGTACGGATCTAA;Error from VEP for: 11:g.119149006_119149019delinsAGGTACGGATCTAA | |
| [2024-04-29 13:21:34,933] {utils.py:315} DEBUG - 2024-04-29 13:21:34 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 11:g.120302576_120302577delinsTG;Error from VEP for: 11:g.120302576_120302577delinsTG | |
| [2024-04-29 13:21:34,933] {utils.py:315} DEBUG - 2024-04-29 13:21:34 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 11:g.120351043T>T;Error from VEP for: 11:g.120351043T>T | |
| [2024-04-29 13:21:34,934] {utils.py:315} DEBUG - 2024-04-29 13:21:34 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 11:g.121460807_121460818delinsCCACTGCATCCC;Error from VEP for: 11:g.121460807_121460818delinsCCACTGCATCCC | |
| [2024-04-29 13:21:34,934] {utils.py:315} DEBUG - 2024-04-29 13:21:34 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 11:g.121475905A>A;Error from VEP for: 11:g.121475905A>A | |
| [2024-04-29 13:21:34,934] {utils.py:315} DEBUG - 2024-04-29 13:21:34 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 11:g.121500401A>A;Error from VEP for: 11:g.121500401A>A | |
| [2024-04-29 13:21:34,934] {utils.py:315} DEBUG - 2024-04-29 13:21:34 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 11:g.121500401_121500402delinsAA;Error from VEP for: 11:g.121500401_121500402delinsAA | |
| [2024-04-29 13:21:34,934] {utils.py:315} DEBUG - 2024-04-29 13:21:34 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 11:g.121500401_121500403delinsAAA;Error from VEP for: 11:g.121500401_121500403delinsAAA | |
| [2024-04-29 13:21:34,934] {utils.py:315} DEBUG - 2024-04-29 13:21:34 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 11:g.121500401_121500404delinsAAAA;Error from VEP for: 11:g.121500401_121500404delinsAAAA | |
| [2024-04-29 13:21:34,934] {utils.py:315} DEBUG - 2024-04-29 13:21:34 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 11:g.123479314C>C;Error from VEP for: 11:g.123479314C>C | |
| [2024-04-29 13:21:34,934] {utils.py:315} DEBUG - 2024-04-29 13:21:34 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 11:g.123489886A>A;Error from VEP for: 11:g.123489886A>A | |
| [2024-04-29 13:21:34,934] {utils.py:315} DEBUG - 2024-04-29 13:21:34 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 11:g.125505378A>A;Error from VEP for: 11:g.125505378A>A | |
| [2024-04-29 13:21:35,778] {utils.py:315} DEBUG - 2024-04-29 13:21:34 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 11:g.125514123T>T;Error from VEP for: 11:g.125514123T>T | |
| [2024-04-29 13:21:35,779] {utils.py:315} DEBUG - 2024-04-29 13:21:34 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 11:g.128563940A>A;Error from VEP for: 11:g.128563940A>A | |
| [2024-04-29 13:21:35,779] {utils.py:315} DEBUG - 2024-04-29 13:21:34 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 11:g.128638115C>C;Error from VEP for: 11:g.128638115C>C | |
| [2024-04-29 13:21:35,779] {utils.py:315} DEBUG - 2024-04-29 13:21:34 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 11:g.128638217G>G;Error from VEP for: 11:g.128638217G>G | |
| [2024-04-29 13:21:35,779] {utils.py:315} DEBUG - 2024-04-29 13:21:35 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 11:g.128638217G>G;Error from VEP for: 11:g.128638217G>G | |
| [2024-04-29 13:21:37,292] {utils.py:315} DEBUG - 2024-04-29 13:21:35 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 11:g.128681037T>T;Error from VEP for: 11:g.128681037T>T | |
| [2024-04-29 13:21:37,292] {utils.py:315} DEBUG - 2024-04-29 13:21:35 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 11:g.130775936T>T;Error from VEP for: 11:g.130775936T>T | |
| [2024-04-29 13:21:37,292] {utils.py:315} DEBUG - 2024-04-29 13:21:35 [main] INFO org.cbioportal.annotator.internal.GenomeNexusImpl - On record 11500 out of 116708, annotation 9% complete | |
| [2024-04-29 13:21:37,292] {utils.py:315} DEBUG - 2024-04-29 13:21:35 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 11:g.130784841_130784843delinsCTT;Error from VEP for: 11:g.130784841_130784843delinsCTT | |
| [2024-04-29 13:21:37,292] {utils.py:315} DEBUG - 2024-04-29 13:21:35 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 11:g.134037889_134037892delinsACTT;Error from VEP for: 11:g.134037889_134037892delinsACTT | |
| [2024-04-29 13:21:37,292] {utils.py:315} DEBUG - 2024-04-29 13:21:35 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 11:g.134048586G>G;Error from VEP for: 11:g.134048586G>G | |
| [2024-04-29 13:21:37,293] {utils.py:315} DEBUG - 2024-04-29 13:21:35 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 11:g.134062752G>G;Error from VEP for: 11:g.134062752G>G | |
| [2024-04-29 13:21:37,293] {utils.py:315} DEBUG - 2024-04-29 13:21:35 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 12:g.394591C>C;Error from VEP for: 12:g.394591C>C | |
| [2024-04-29 13:21:37,293] {utils.py:315} DEBUG - 2024-04-29 13:21:35 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 12:g.416953T>T;Error from VEP for: 12:g.416953T>T | |
| [2024-04-29 13:21:37,293] {utils.py:315} DEBUG - 2024-04-29 13:21:35 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 12:g.432249T>T;Error from VEP for: 12:g.432249T>T | |
| [2024-04-29 13:21:37,293] {utils.py:315} DEBUG - 2024-04-29 13:21:35 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 12:g.498268G>G;Error from VEP for: 12:g.498268G>G | |
| [2024-04-29 13:21:37,293] {utils.py:315} DEBUG - 2024-04-29 13:21:35 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 12:g.498268_498269delinsGG;Error from VEP for: 12:g.498268_498269delinsGG | |
| [2024-04-29 13:21:37,293] {utils.py:315} DEBUG - 2024-04-29 13:21:35 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 12:g.498268_498273delinsGGGGGG;Error from VEP for: 12:g.498268_498273delinsGGGGGG | |
| [2024-04-29 13:21:37,293] {utils.py:315} DEBUG - 2024-04-29 13:21:35 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 12:g.498268_498274delinsGGGGGGG;Error from VEP for: 12:g.498268_498274delinsGGGGGGG | |
| [2024-04-29 13:21:37,293] {utils.py:315} DEBUG - 2024-04-29 13:21:35 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 12:g.498371_498375delinsGACAA;Error from VEP for: 12:g.498371_498375delinsGACAA | |
| [2024-04-29 13:21:37,293] {utils.py:315} DEBUG - 2024-04-29 13:21:35 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 12:g.862771G>G;Error from VEP for: 12:g.862771G>G | |
| [2024-04-29 13:21:37,293] {utils.py:315} DEBUG - 2024-04-29 13:21:35 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 12:g.970297A>A;Error from VEP for: 12:g.970297A>A | |
| [2024-04-29 13:21:37,293] {utils.py:315} DEBUG - 2024-04-29 13:21:37 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 12:g.970297A>A;Error from VEP for: 12:g.970297A>A | |
| [2024-04-29 13:21:37,668] {utils.py:315} DEBUG - 2024-04-29 13:21:37 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 12:g.989023G>G;Error from VEP for: 12:g.989023G>G | |
| [2024-04-29 13:21:37,668] {utils.py:315} DEBUG - 2024-04-29 13:21:37 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 12:g.1003758_1003766delinsCAACTAGTT;Error from VEP for: 12:g.1003758_1003766delinsCAACTAGTT | |
| [2024-04-29 13:21:37,668] {utils.py:315} DEBUG - 2024-04-29 13:21:37 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 12:g.1005704T>T;Error from VEP for: 12:g.1005704T>T | |
| [2024-04-29 13:21:37,668] {utils.py:315} DEBUG - 2024-04-29 13:21:37 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 12:g.1017928C>C;Error from VEP for: 12:g.1017928C>C | |
| [2024-04-29 13:21:37,668] {utils.py:315} DEBUG - 2024-04-29 13:21:37 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 12:g.1137018_1137020delinsTTG;Error from VEP for: 12:g.1137018_1137020delinsTTG | |
| [2024-04-29 13:21:37,668] {utils.py:315} DEBUG - 2024-04-29 13:21:37 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 12:g.1137352G>G;Error from VEP for: 12:g.1137352G>G | |
| [2024-04-29 13:21:37,668] {utils.py:315} DEBUG - 2024-04-29 13:21:37 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 12:g.1291166A>A;Error from VEP for: 12:g.1291166A>A | |
| [2024-04-29 13:21:37,668] {utils.py:315} DEBUG - 2024-04-29 13:21:37 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 12:g.1345991A>A;Error from VEP for: 12:g.1345991A>A | |
| [2024-04-29 13:21:37,668] {utils.py:315} DEBUG - 2024-04-29 13:21:37 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 12:g.1481069_1481071delinsAAG;Error from VEP for: 12:g.1481069_1481071delinsAAG | |
| [2024-04-29 13:21:37,668] {utils.py:315} DEBUG - 2024-04-29 13:21:37 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 12:g.4409195_4409196delinsAG;Error from VEP for: 12:g.4409195_4409196delinsAG | |
| [2024-04-29 13:21:37,668] {utils.py:315} DEBUG - 2024-04-29 13:21:37 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 12:g.4409271A>A;Error from VEP for: 12:g.4409271A>A | |
| [2024-04-29 13:21:37,668] {utils.py:315} DEBUG - 2024-04-29 13:21:37 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 12:g.4714200_4714203delinsACCC;Error from VEP for: 12:g.4714200_4714203delinsACCC | |
| [2024-04-29 13:21:37,668] {utils.py:315} DEBUG - 2024-04-29 13:21:37 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 12:g.4719362A>A;Error from VEP for: 12:g.4719362A>A | |
| [2024-04-29 13:21:37,668] {utils.py:315} DEBUG - 2024-04-29 13:21:37 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 12:g.4723002T>T;Error from VEP for: 12:g.4723002T>T | |
| [2024-04-29 13:21:37,668] {utils.py:315} DEBUG - 2024-04-29 13:21:37 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 12:g.6497580G>G;Error from VEP for: 12:g.6497580G>G | |
| [2024-04-29 13:21:37,669] {utils.py:315} DEBUG - 2024-04-29 13:21:37 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 12:g.6499902G>G;Error from VEP for: 12:g.6499902G>G | |
| [2024-04-29 13:21:37,669] {utils.py:315} DEBUG - 2024-04-29 13:21:37 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 12:g.12038881_12038893delinsGAGAAAATGTCCA;Error from VEP for: 12:g.12038881_12038893delinsGAGAAAATGTCCA | |
| [2024-04-29 13:21:37,669] {utils.py:315} DEBUG - 2024-04-29 13:21:37 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 12:g.12273985C>C;Error from VEP for: 12:g.12273985C>C | |
| [2024-04-29 13:21:37,669] {utils.py:315} DEBUG - 2024-04-29 13:21:37 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 12:g.12274318G>G;Error from VEP for: 12:g.12274318G>G | |
| [2024-04-29 13:21:37,669] {utils.py:315} DEBUG - 2024-04-29 13:21:37 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 12:g.12303942T>T;Error from VEP for: 12:g.12303942T>T | |
| [2024-04-29 13:21:37,669] {utils.py:315} DEBUG - 2024-04-29 13:21:37 [main] INFO org.cbioportal.annotator.internal.GenomeNexusImpl - On record 12000 out of 116708, annotation 10% complete | |
| [2024-04-29 13:21:37,669] {utils.py:315} DEBUG - 2024-04-29 13:21:37 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 12:g.12870812_12870816delinsGGAGC;Error from VEP for: 12:g.12870812_12870816delinsGGAGC | |
| [2024-04-29 13:21:37,669] {utils.py:315} DEBUG - 2024-04-29 13:21:37 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 12:g.12870842C>C;Error from VEP for: 12:g.12870842C>C | |
| [2024-04-29 13:21:37,669] {utils.py:315} DEBUG - 2024-04-29 13:21:37 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 12:g.12870972_12870973delinsCA;Error from VEP for: 12:g.12870972_12870973delinsCA | |
| [2024-04-29 13:21:37,669] {utils.py:315} DEBUG - 2024-04-29 13:21:37 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 12:g.12871060_12871070delinsAAGGTGCCTGC;Error from VEP for: 12:g.12871060_12871070delinsAAGGTGCCTGC | |
| [2024-04-29 13:21:37,669] {utils.py:315} DEBUG - 2024-04-29 13:21:37 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 12:g.13715530_13715531delinsGA;Error from VEP for: 12:g.13715530_13715531delinsGA | |
| [2024-04-29 13:21:37,669] {utils.py:315} DEBUG - 2024-04-29 13:21:37 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 12:g.13715689_13715692delinsACCC;Error from VEP for: 12:g.13715689_13715692delinsACCC | |
| [2024-04-29 13:21:37,669] {utils.py:315} DEBUG - 2024-04-29 13:21:37 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 12:g.13716189C>C;Error from VEP for: 12:g.13716189C>C | |
| [2024-04-29 13:21:37,669] {utils.py:315} DEBUG - 2024-04-29 13:21:37 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 12:g.13717082_13717084delinsGGA;Error from VEP for: 12:g.13717082_13717084delinsGGA | |
| [2024-04-29 13:21:37,669] {utils.py:315} DEBUG - 2024-04-29 13:21:37 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 12:g.13722807C>C;Error from VEP for: 12:g.13722807C>C | |
| [2024-04-29 13:21:37,669] {utils.py:315} DEBUG - 2024-04-29 13:21:37 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 12:g.13769540G>G;Error from VEP for: 12:g.13769540G>G | |
| [2024-04-29 13:21:37,669] {utils.py:315} DEBUG - 2024-04-29 13:21:37 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 12:g.14766135T>T;Error from VEP for: 12:g.14766135T>T | |
| [2024-04-29 13:21:38,007] {utils.py:315} DEBUG - 2024-04-29 13:21:37 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 12:g.14769653T>T;Error from VEP for: 12:g.14769653T>T | |
| [2024-04-29 13:21:38,007] {utils.py:315} DEBUG - 2024-04-29 13:21:37 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 12:g.14775080_14775081delinsAT;Error from VEP for: 12:g.14775080_14775081delinsAT | |
| [2024-04-29 13:21:38,008] {utils.py:315} DEBUG - 2024-04-29 13:21:37 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 12:g.14778829T>T;Error from VEP for: 12:g.14778829T>T | |
| [2024-04-29 13:21:38,008] {utils.py:315} DEBUG - 2024-04-29 13:21:37 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 12:g.14796510T>T;Error from VEP for: 12:g.14796510T>T | |
| [2024-04-29 13:21:38,008] {utils.py:315} DEBUG - 2024-04-29 13:21:37 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 12:g.14827464_14827466delinsATC;Error from VEP for: 12:g.14827464_14827466delinsATC | |
| [2024-04-29 13:21:38,008] {utils.py:315} DEBUG - 2024-04-29 13:21:38 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 12:g.14827464_14827466delinsATC;Error from VEP for: 12:g.14827464_14827466delinsATC | |
| [2024-04-29 13:21:38,764] {utils.py:315} DEBUG - 2024-04-29 13:21:38 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 12:g.15095528_15095530delinsGAA;Error from VEP for: 12:g.15095528_15095530delinsGAA | |
| [2024-04-29 13:21:38,765] {utils.py:315} DEBUG - 2024-04-29 13:21:38 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 12:g.18435392G>G;Error from VEP for: 12:g.18435392G>G | |
| [2024-04-29 13:21:38,765] {utils.py:315} DEBUG - 2024-04-29 13:21:38 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 12:g.18435399_18435401delinsCCC;Error from VEP for: 12:g.18435399_18435401delinsCCC | |
| [2024-04-29 13:21:38,765] {utils.py:315} DEBUG - 2024-04-29 13:21:38 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 12:g.18435399_18435401delinsCCC;Error from VEP for: 12:g.18435399_18435401delinsCCC | |
| [2024-04-29 13:21:38,765] {utils.py:315} DEBUG - 2024-04-29 13:21:38 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 12:g.18443818_18443827delinsTTAATTTCAA;Error from VEP for: 12:g.18443818_18443827delinsTTAATTTCAA | |
| [2024-04-29 13:21:38,766] {utils.py:315} DEBUG - 2024-04-29 13:21:38 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 12:g.18466932_18466933delinsAG;Error from VEP for: 12:g.18466932_18466933delinsAG | |
| [2024-04-29 13:21:38,766] {utils.py:315} DEBUG - 2024-04-29 13:21:38 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 12:g.18649081T>T;Error from VEP for: 12:g.18649081T>T | |
| [2024-04-29 13:21:38,766] {utils.py:315} DEBUG - 2024-04-29 13:21:38 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 12:g.18691148A>A;Error from VEP for: 12:g.18691148A>A | |
| [2024-04-29 13:21:38,766] {utils.py:315} DEBUG - 2024-04-29 13:21:38 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 12:g.18747475_18747478delinsAGTT;Error from VEP for: 12:g.18747475_18747478delinsAGTT | |
| [2024-04-29 13:21:38,766] {utils.py:315} DEBUG - 2024-04-29 13:21:38 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 12:g.18800990A>A;Error from VEP for: 12:g.18800990A>A | |
| [2024-04-29 13:21:38,766] {utils.py:315} DEBUG - 2024-04-29 13:21:38 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 12:g.18801085A>A;Error from VEP for: 12:g.18801085A>A | |
| [2024-04-29 13:21:38,766] {utils.py:315} DEBUG - 2024-04-29 13:21:38 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 12:g.18801112_18801115delinsTTGT;Error from VEP for: 12:g.18801112_18801115delinsTTGT | |
| [2024-04-29 13:21:38,766] {utils.py:315} DEBUG - 2024-04-29 13:21:38 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 12:g.19410381A>A;Error from VEP for: 12:g.19410381A>A | |
| [2024-04-29 13:21:38,766] {utils.py:315} DEBUG - 2024-04-29 13:21:38 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 12:g.19496335A>A;Error from VEP for: 12:g.19496335A>A | |
| [2024-04-29 13:21:38,766] {utils.py:315} DEBUG - 2024-04-29 13:21:38 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 12:g.19514518A>A;Error from VEP for: 12:g.19514518A>A | |
| [2024-04-29 13:21:38,766] {utils.py:315} DEBUG - 2024-04-29 13:21:38 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 12:g.25362756_25362758delinsCTT;Error from VEP for: 12:g.25362756_25362758delinsCTT | |
| [2024-04-29 13:21:39,178] {utils.py:315} DEBUG - 2024-04-29 13:21:38 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 12:g.25368390T>T;Error from VEP for: 12:g.25368390T>T | |
| [2024-04-29 13:21:39,178] {utils.py:315} DEBUG - 2024-04-29 13:21:39 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 12:g.26568292A>A;Error from VEP for: 12:g.26568292A>A | |
| [2024-04-29 13:21:39,844] {utils.py:315} DEBUG - 2024-04-29 13:21:39 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 12:g.26808657T>T;Error from VEP for: 12:g.26808657T>T | |
| [2024-04-29 13:21:39,845] {utils.py:315} DEBUG - 2024-04-29 13:21:39 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 12:g.26869133_26869141delinsCTGCATTCA;Error from VEP for: 12:g.26869133_26869141delinsCTGCATTCA | |
| [2024-04-29 13:21:40,617] {utils.py:315} DEBUG - 2024-04-29 13:21:39 [main] INFO org.cbioportal.annotator.internal.GenomeNexusImpl - On record 12500 out of 116708, annotation 10% complete | |
| [2024-04-29 13:21:40,617] {utils.py:315} DEBUG - 2024-04-29 13:21:39 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 12:g.40626083G>G;Error from VEP for: 12:g.40626083G>G | |
| [2024-04-29 13:21:40,617] {utils.py:315} DEBUG - 2024-04-29 13:21:39 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 12:g.40671946A>A;Error from VEP for: 12:g.40671946A>A | |
| [2024-04-29 13:21:40,617] {utils.py:315} DEBUG - 2024-04-29 13:21:39 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 12:g.40681212G>G;Error from VEP for: 12:g.40681212G>G | |
| [2024-04-29 13:21:40,617] {utils.py:315} DEBUG - 2024-04-29 13:21:39 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 12:g.40702287A>A;Error from VEP for: 12:g.40702287A>A | |
| [2024-04-29 13:21:40,617] {utils.py:315} DEBUG - 2024-04-29 13:21:39 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 12:g.40713870A>A;Error from VEP for: 12:g.40713870A>A | |
| [2024-04-29 13:21:40,617] {utils.py:315} DEBUG - 2024-04-29 13:21:39 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 12:g.40734234A>A;Error from VEP for: 12:g.40734234A>A | |
| [2024-04-29 13:21:40,617] {utils.py:315} DEBUG - 2024-04-29 13:21:39 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 12:g.40748102A>A;Error from VEP for: 12:g.40748102A>A | |
| [2024-04-29 13:21:40,617] {utils.py:315} DEBUG - 2024-04-29 13:21:39 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 12:g.40760743T>T;Error from VEP for: 12:g.40760743T>T | |
| [2024-04-29 13:21:40,617] {utils.py:315} DEBUG - 2024-04-29 13:21:39 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 12:g.40760816A>A;Error from VEP for: 12:g.40760816A>A | |
| [2024-04-29 13:21:40,617] {utils.py:315} DEBUG - 2024-04-29 13:21:39 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 12:g.40761429T>T;Error from VEP for: 12:g.40761429T>T | |
| [2024-04-29 13:21:40,617] {utils.py:315} DEBUG - 2024-04-29 13:21:40 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 12:g.41900264G>G;Error from VEP for: 12:g.41900264G>G | |
| [2024-04-29 13:21:42,640] {utils.py:315} DEBUG - 2024-04-29 13:21:40 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 12:g.43763167A>A;Error from VEP for: 12:g.43763167A>A | |
| [2024-04-29 13:21:42,640] {utils.py:315} DEBUG - 2024-04-29 13:21:40 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 12:g.43833806_43833807delinsTC;Error from VEP for: 12:g.43833806_43833807delinsTC | |
| [2024-04-29 13:21:42,640] {utils.py:315} DEBUG - 2024-04-29 13:21:40 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 12:g.43833808T>T;Error from VEP for: 12:g.43833808T>T | |
| [2024-04-29 13:21:42,640] {utils.py:315} DEBUG - 2024-04-29 13:21:40 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 12:g.43925919C>C;Error from VEP for: 12:g.43925919C>C | |
| [2024-04-29 13:21:42,640] {utils.py:315} DEBUG - 2024-04-29 13:21:40 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 12:g.44162032A>A;Error from VEP for: 12:g.44162032A>A | |
| [2024-04-29 13:21:42,640] {utils.py:315} DEBUG - 2024-04-29 13:21:40 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 12:g.44180569T>T;Error from VEP for: 12:g.44180569T>T | |
| [2024-04-29 13:21:42,640] {utils.py:315} DEBUG - 2024-04-29 13:21:40 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 12:g.44180582T>T;Error from VEP for: 12:g.44180582T>T | |
| [2024-04-29 13:21:42,640] {utils.py:315} DEBUG - 2024-04-29 13:21:40 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 12:g.44189287T>T;Error from VEP for: 12:g.44189287T>T | |
| [2024-04-29 13:21:42,641] {utils.py:315} DEBUG - 2024-04-29 13:21:40 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 12:g.44191239T>T;Error from VEP for: 12:g.44191239T>T | |
| [2024-04-29 13:21:42,641] {utils.py:315} DEBUG - 2024-04-29 13:21:40 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 12:g.48250939_48250941delinsAGG;Error from VEP for: 12:g.48250939_48250941delinsAGG | |
| [2024-04-29 13:21:42,641] {utils.py:315} DEBUG - 2024-04-29 13:21:40 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 12:g.49086775T>T;Error from VEP for: 12:g.49086775T>T | |
| [2024-04-29 13:21:42,641] {utils.py:315} DEBUG - 2024-04-29 13:21:40 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 12:g.49086789T>T;Error from VEP for: 12:g.49086789T>T | |
| [2024-04-29 13:21:42,641] {utils.py:315} DEBUG - 2024-04-29 13:21:40 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 12:g.49086802_49086805delinsTTCT;Error from VEP for: 12:g.49086802_49086805delinsTTCT | |
| [2024-04-29 13:21:42,641] {utils.py:315} DEBUG - 2024-04-29 13:21:40 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 12:g.49099623T>T;Error from VEP for: 12:g.49099623T>T | |
| [2024-04-29 13:21:42,641] {utils.py:315} DEBUG - 2024-04-29 13:21:40 [main] INFO org.cbioportal.annotator.internal.GenomeNexusImpl - On record 13000 out of 116708, annotation 11% complete | |
| [2024-04-29 13:21:42,641] {utils.py:315} DEBUG - 2024-04-29 13:21:40 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 12:g.49374348G>G;Error from VEP for: 12:g.49374348G>G | |
| [2024-04-29 13:21:42,641] {utils.py:315} DEBUG - 2024-04-29 13:21:40 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 12:g.49375164C>C;Error from VEP for: 12:g.49375164C>C | |
| [2024-04-29 13:21:42,641] {utils.py:315} DEBUG - 2024-04-29 13:21:40 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 12:g.52306155A>A;Error from VEP for: 12:g.52306155A>A | |
| [2024-04-29 13:21:42,641] {utils.py:315} DEBUG - 2024-04-29 13:21:40 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 12:g.52306272C>C;Error from VEP for: 12:g.52306272C>C | |
| [2024-04-29 13:21:42,641] {utils.py:315} DEBUG - 2024-04-29 13:21:40 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 12:g.52309932G>G;Error from VEP for: 12:g.52309932G>G | |
| [2024-04-29 13:21:42,641] {utils.py:315} DEBUG - 2024-04-29 13:21:40 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 12:g.52314634A>A;Error from VEP for: 12:g.52314634A>A | |
| [2024-04-29 13:21:42,641] {utils.py:315} DEBUG - 2024-04-29 13:21:40 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 12:g.52314716G>G;Error from VEP for: 12:g.52314716G>G | |
| [2024-04-29 13:21:42,641] {utils.py:315} DEBUG - 2024-04-29 13:21:40 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 12:g.52370198_52370200delinsTCA;Error from VEP for: 12:g.52370198_52370200delinsTCA | |
| [2024-04-29 13:21:42,641] {utils.py:315} DEBUG - 2024-04-29 13:21:40 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 12:g.52380736T>T;Error from VEP for: 12:g.52380736T>T | |
| [2024-04-29 13:21:42,641] {utils.py:315} DEBUG - 2024-04-29 13:21:40 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 12:g.52380975_52380978delinsAAAC;Error from VEP for: 12:g.52380975_52380978delinsAAAC | |
| [2024-04-29 13:21:42,641] {utils.py:315} DEBUG - 2024-04-29 13:21:40 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 12:g.53421593_53421604delinsGGTATCGGGATG;Error from VEP for: 12:g.53421593_53421604delinsGGTATCGGGATG | |
| [2024-04-29 13:21:42,641] {utils.py:315} DEBUG - 2024-04-29 13:21:42 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 12:g.53607064A>A;Error from VEP for: 12:g.53607064A>A | |
| [2024-04-29 13:21:43,494] {utils.py:315} DEBUG - 2024-04-29 13:21:42 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 12:g.53621288_53621294delinsCAGGGCA;Error from VEP for: 12:g.53621288_53621294delinsCAGGGCA | |
| [2024-04-29 13:21:43,494] {utils.py:315} DEBUG - 2024-04-29 13:21:42 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 12:g.53819645G>G;Error from VEP for: 12:g.53819645G>G | |
| [2024-04-29 13:21:43,494] {utils.py:315} DEBUG - 2024-04-29 13:21:42 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 12:g.53874893_53874894delinsAT;Error from VEP for: 12:g.53874893_53874894delinsAT | |
| [2024-04-29 13:21:43,494] {utils.py:315} DEBUG - 2024-04-29 13:21:42 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 12:g.53876883G>G;Error from VEP for: 12:g.53876883G>G | |
| [2024-04-29 13:21:43,494] {utils.py:315} DEBUG - 2024-04-29 13:21:42 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 12:g.53877256A>A;Error from VEP for: 12:g.53877256A>A | |
| [2024-04-29 13:21:43,494] {utils.py:315} DEBUG - 2024-04-29 13:21:42 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 12:g.54366916_54366917delinsAG;Error from VEP for: 12:g.54366916_54366917delinsAG | |
| [2024-04-29 13:21:43,494] {utils.py:315} DEBUG - 2024-04-29 13:21:42 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 12:g.54366916_54366919delinsAGAG;Error from VEP for: 12:g.54366916_54366919delinsAGAG | |
| [2024-04-29 13:21:43,494] {utils.py:315} DEBUG - 2024-04-29 13:21:42 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 12:g.54369033T>T;Error from VEP for: 12:g.54369033T>T | |
| [2024-04-29 13:21:43,494] {utils.py:315} DEBUG - 2024-04-29 13:21:42 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 12:g.54789892G>G;Error from VEP for: 12:g.54789892G>G | |
| [2024-04-29 13:21:43,494] {utils.py:315} DEBUG - 2024-04-29 13:21:42 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 12:g.54789918C>C;Error from VEP for: 12:g.54789918C>C | |
| [2024-04-29 13:21:43,494] {utils.py:315} DEBUG - 2024-04-29 13:21:42 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 12:g.54797019_54797021delinsGCC;Error from VEP for: 12:g.54797019_54797021delinsGCC | |
| [2024-04-29 13:21:43,495] {utils.py:315} DEBUG - 2024-04-29 13:21:42 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 12:g.56101410A>A;Error from VEP for: 12:g.56101410A>A | |
| [2024-04-29 13:21:43,495] {utils.py:315} DEBUG - 2024-04-29 13:21:42 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 12:g.56478851_56478859delinsCGCGTGGTG;Error from VEP for: 12:g.56478851_56478859delinsCGCGTGGTG | |
| [2024-04-29 13:21:43,495] {utils.py:315} DEBUG - 2024-04-29 13:21:42 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 12:g.56486818T>T;Error from VEP for: 12:g.56486818T>T | |
| [2024-04-29 13:21:43,495] {utils.py:315} DEBUG - 2024-04-29 13:21:42 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 12:g.56492071_56492075delinsCTGTA;Error from VEP for: 12:g.56492071_56492075delinsCTGTA | |
| [2024-04-29 13:21:43,495] {utils.py:315} DEBUG - 2024-04-29 13:21:42 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 12:g.56492196A>A;Error from VEP for: 12:g.56492196A>A | |
| [2024-04-29 13:21:43,495] {utils.py:315} DEBUG - 2024-04-29 13:21:42 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 12:g.56492196_56492197delinsAA;Error from VEP for: 12:g.56492196_56492197delinsAA | |
| [2024-04-29 13:21:43,495] {utils.py:315} DEBUG - 2024-04-29 13:21:42 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 12:g.56492196_56492198delinsAAA;Error from VEP for: 12:g.56492196_56492198delinsAAA | |
| [2024-04-29 13:21:43,495] {utils.py:315} DEBUG - 2024-04-29 13:21:42 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 12:g.56492196_56492199delinsAAAA;Error from VEP for: 12:g.56492196_56492199delinsAAAA | |
| [2024-04-29 13:21:43,495] {utils.py:315} DEBUG - 2024-04-29 13:21:42 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 12:g.56493620_56493621delinsAG;Error from VEP for: 12:g.56493620_56493621delinsAG | |
| [2024-04-29 13:21:43,495] {utils.py:315} DEBUG - 2024-04-29 13:21:42 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 12:g.56495715C>C;Error from VEP for: 12:g.56495715C>C | |
| [2024-04-29 13:21:43,495] {utils.py:315} DEBUG - 2024-04-29 13:21:42 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 12:g.57106300A>A;Error from VEP for: 12:g.57106300A>A | |
| [2024-04-29 13:21:43,495] {utils.py:315} DEBUG - 2024-04-29 13:21:42 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 12:g.57109759C>C;Error from VEP for: 12:g.57109759C>C | |
| [2024-04-29 13:21:43,495] {utils.py:315} DEBUG - 2024-04-29 13:21:42 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 12:g.57110704T>T;Error from VEP for: 12:g.57110704T>T | |
| [2024-04-29 13:21:43,495] {utils.py:315} DEBUG - 2024-04-29 13:21:42 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 12:g.57111307G>G;Error from VEP for: 12:g.57111307G>G | |
| [2024-04-29 13:21:43,495] {utils.py:315} DEBUG - 2024-04-29 13:21:42 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 12:g.57111327G>G;Error from VEP for: 12:g.57111327G>G | |
| [2024-04-29 13:21:43,495] {utils.py:315} DEBUG - 2024-04-29 13:21:42 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 12:g.57111396G>G;Error from VEP for: 12:g.57111396G>G | |
| [2024-04-29 13:21:43,495] {utils.py:315} DEBUG - 2024-04-29 13:21:42 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 12:g.57111520_57111588delinsGTGGGGGCCCCTTTGGGGGGTGGGGTAGCTGGGCCTCCTTTTGGGGAGGGAGGAGTTGCAGCTGGGGTT;Error from VEP for: 12:g.57111520_57111588delinsGTGGGGGCCCCTTTGGGGGGTGGGGTAGCTGGGCCTCCTTTTGGGGAGGGAGGAGTTGCAGCTGGGGTT | |
| [2024-04-29 13:21:43,495] {utils.py:315} DEBUG - 2024-04-29 13:21:42 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 12:g.57111798G>G;Error from VEP for: 12:g.57111798G>G | |
| [2024-04-29 13:21:43,495] {utils.py:315} DEBUG - 2024-04-29 13:21:42 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 12:g.57112005G>G;Error from VEP for: 12:g.57112005G>G | |
| [2024-04-29 13:21:43,495] {utils.py:315} DEBUG - 2024-04-29 13:21:42 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 12:g.57112143G>G;Error from VEP for: 12:g.57112143G>G | |
| [2024-04-29 13:21:43,495] {utils.py:315} DEBUG - 2024-04-29 13:21:42 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 12:g.57112904_57112906delinsGAG;Error from VEP for: 12:g.57112904_57112906delinsGAG | |
| [2024-04-29 13:21:43,495] {utils.py:315} DEBUG - 2024-04-29 13:21:42 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 12:g.57113065T>T;Error from VEP for: 12:g.57113065T>T | |
| [2024-04-29 13:21:43,495] {utils.py:315} DEBUG - 2024-04-29 13:21:42 [main] INFO org.cbioportal.annotator.internal.GenomeNexusImpl - On record 13500 out of 116708, annotation 11% complete | |
| [2024-04-29 13:21:43,495] {utils.py:315} DEBUG - 2024-04-29 13:21:42 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 12:g.57493585C>C;Error from VEP for: 12:g.57493585C>C | |
| [2024-04-29 13:21:43,495] {utils.py:315} DEBUG - 2024-04-29 13:21:42 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 12:g.57496181C>C;Error from VEP for: 12:g.57496181C>C | |
| [2024-04-29 13:21:43,495] {utils.py:315} DEBUG - 2024-04-29 13:21:42 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 12:g.57500491C>C;Error from VEP for: 12:g.57500491C>C | |
| [2024-04-29 13:21:43,495] {utils.py:315} DEBUG - 2024-04-29 13:21:43 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 12:g.57556223C>C;Error from VEP for: 12:g.57556223C>C | |
| [2024-04-29 13:21:44,492] {utils.py:315} DEBUG - 2024-04-29 13:21:43 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 12:g.57560723C>C;Error from VEP for: 12:g.57560723C>C | |
| [2024-04-29 13:21:44,492] {utils.py:315} DEBUG - 2024-04-29 13:21:43 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 12:g.57571345G>G;Error from VEP for: 12:g.57571345G>G | |
| [2024-04-29 13:21:44,493] {utils.py:315} DEBUG - 2024-04-29 13:21:43 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 12:g.57581135C>C;Error from VEP for: 12:g.57581135C>C | |
| [2024-04-29 13:21:44,493] {utils.py:315} DEBUG - 2024-04-29 13:21:43 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 12:g.57603940C>C;Error from VEP for: 12:g.57603940C>C | |
| [2024-04-29 13:21:44,493] {utils.py:315} DEBUG - 2024-04-29 13:21:43 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 12:g.57606239G>G;Error from VEP for: 12:g.57606239G>G | |
| [2024-04-29 13:21:44,493] {utils.py:315} DEBUG - 2024-04-29 13:21:43 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 12:g.57606420C>C;Error from VEP for: 12:g.57606420C>C | |
| [2024-04-29 13:21:44,493] {utils.py:315} DEBUG - 2024-04-29 13:21:43 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 12:g.57857549_57857563delinsGGGGGCCCCCAGTGT;Error from VEP for: 12:g.57857549_57857563delinsGGGGGCCCCCAGTGT | |
| [2024-04-29 13:21:44,493] {utils.py:315} DEBUG - 2024-04-29 13:21:43 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 12:g.57860075G>G;Error from VEP for: 12:g.57860075G>G | |
| [2024-04-29 13:21:44,493] {utils.py:315} DEBUG - 2024-04-29 13:21:43 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 12:g.57860075_57860076delinsGG;Error from VEP for: 12:g.57860075_57860076delinsGG | |
| [2024-04-29 13:21:44,493] {utils.py:315} DEBUG - 2024-04-29 13:21:43 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 12:g.57864218C>C;Error from VEP for: 12:g.57864218C>C | |
| [2024-04-29 13:21:44,493] {utils.py:315} DEBUG - 2024-04-29 13:21:43 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 12:g.57910529_57910531delinsAGT;Error from VEP for: 12:g.57910529_57910531delinsAGT | |
| [2024-04-29 13:21:44,493] {utils.py:315} DEBUG - 2024-04-29 13:21:43 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 12:g.57910960_57910963delinsCTTC;Error from VEP for: 12:g.57910960_57910963delinsCTTC | |
| [2024-04-29 13:21:44,493] {utils.py:315} DEBUG - 2024-04-29 13:21:43 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 12:g.57989688C>C;Error from VEP for: 12:g.57989688C>C | |
| [2024-04-29 13:21:44,493] {utils.py:315} DEBUG - 2024-04-29 13:21:43 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 12:g.58121116C>C;Error from VEP for: 12:g.58121116C>C | |
| [2024-04-29 13:21:44,493] {utils.py:315} DEBUG - 2024-04-29 13:21:43 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 12:g.58122001G>G;Error from VEP for: 12:g.58122001G>G | |
| [2024-04-29 13:21:44,493] {utils.py:315} DEBUG - 2024-04-29 13:21:43 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 12:g.58130989A>A;Error from VEP for: 12:g.58130989A>A | |
| [2024-04-29 13:21:44,493] {utils.py:315} DEBUG - 2024-04-29 13:21:43 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 12:g.58157486G>G;Error from VEP for: 12:g.58157486G>G | |
| [2024-04-29 13:21:44,493] {utils.py:315} DEBUG - 2024-04-29 13:21:43 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 12:g.58160654C>C;Error from VEP for: 12:g.58160654C>C | |
| [2024-04-29 13:21:44,493] {utils.py:315} DEBUG - 2024-04-29 13:21:43 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 12:g.58160756_58160768delinsGGCGCCCAACTCG;Error from VEP for: 12:g.58160756_58160768delinsGGCGCCCAACTCG | |
| [2024-04-29 13:21:44,493] {utils.py:315} DEBUG - 2024-04-29 13:21:43 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 12:g.64891001_64891003delinsGAA;Error from VEP for: 12:g.64891001_64891003delinsGAA | |
| [2024-04-29 13:21:44,493] {utils.py:315} DEBUG - 2024-04-29 13:21:43 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 12:g.64891033_64891035delinsTAA;Error from VEP for: 12:g.64891033_64891035delinsTAA | |
| [2024-04-29 13:21:44,493] {utils.py:315} DEBUG - 2024-04-29 13:21:43 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 12:g.66641621C>C;Error from VEP for: 12:g.66641621C>C | |
| [2024-04-29 13:21:44,493] {utils.py:315} DEBUG - 2024-04-29 13:21:44 [main] INFO org.cbioportal.annotator.internal.GenomeNexusImpl - On record 14000 out of 116708, annotation 11% complete | |
| [2024-04-29 13:21:45,220] {utils.py:315} DEBUG - 2024-04-29 13:21:44 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 12:g.69233090C>C;Error from VEP for: 12:g.69233090C>C | |
| [2024-04-29 13:21:45,220] {utils.py:315} DEBUG - 2024-04-29 13:21:44 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 12:g.69233240A>A;Error from VEP for: 12:g.69233240A>A | |
| [2024-04-29 13:21:45,220] {utils.py:315} DEBUG - 2024-04-29 13:21:44 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 12:g.69233887T>T;Error from VEP for: 12:g.69233887T>T | |
| [2024-04-29 13:21:45,220] {utils.py:315} DEBUG - 2024-04-29 13:21:44 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 12:g.69233887_69233888delinsTT;Error from VEP for: 12:g.69233887_69233888delinsTT | |
| [2024-04-29 13:21:45,220] {utils.py:315} DEBUG - 2024-04-29 13:21:44 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 12:g.69968778A>A;Error from VEP for: 12:g.69968778A>A | |
| [2024-04-29 13:21:45,220] {utils.py:315} DEBUG - 2024-04-29 13:21:44 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 12:g.71977816G>G;Error from VEP for: 12:g.71977816G>G | |
| [2024-04-29 13:21:45,220] {utils.py:315} DEBUG - 2024-04-29 13:21:44 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 12:g.78225114T>T;Error from VEP for: 12:g.78225114T>T | |
| [2024-04-29 13:21:45,220] {utils.py:315} DEBUG - 2024-04-29 13:21:44 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 12:g.78388627_78388630delinsCAAC;Error from VEP for: 12:g.78388627_78388630delinsCAAC | |
| [2024-04-29 13:21:45,220] {utils.py:315} DEBUG - 2024-04-29 13:21:44 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 12:g.78400368_78400372delinsAAAGC;Error from VEP for: 12:g.78400368_78400372delinsAAAGC | |
| [2024-04-29 13:21:45,220] {utils.py:315} DEBUG - 2024-04-29 13:21:44 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 12:g.78443808A>A;Error from VEP for: 12:g.78443808A>A | |
| [2024-04-29 13:21:45,220] {utils.py:315} DEBUG - 2024-04-29 13:21:44 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 12:g.78444673A>A;Error from VEP for: 12:g.78444673A>A | |
| [2024-04-29 13:21:45,220] {utils.py:315} DEBUG - 2024-04-29 13:21:44 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 12:g.78444678_78444679delinsCT;Error from VEP for: 12:g.78444678_78444679delinsCT | |
| [2024-04-29 13:21:45,220] {utils.py:315} DEBUG - 2024-04-29 13:21:44 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 12:g.78591116_78591118delinsTCT;Error from VEP for: 12:g.78591116_78591118delinsTCT | |
| [2024-04-29 13:21:45,220] {utils.py:315} DEBUG - 2024-04-29 13:21:44 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 12:g.78604246C>C;Error from VEP for: 12:g.78604246C>C | |
| [2024-04-29 13:21:45,220] {utils.py:315} DEBUG - 2024-04-29 13:21:44 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 12:g.78604325_78604326delinsTT;Error from VEP for: 12:g.78604325_78604326delinsTT | |
| [2024-04-29 13:21:45,220] {utils.py:315} DEBUG - 2024-04-29 13:21:44 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 12:g.78604334A>A;Error from VEP for: 12:g.78604334A>A | |
| [2024-04-29 13:21:45,220] {utils.py:315} DEBUG - 2024-04-29 13:21:44 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 12:g.89742861_89742864delinsTCTC;Error from VEP for: 12:g.89742861_89742864delinsTCTC | |
| [2024-04-29 13:21:45,220] {utils.py:315} DEBUG - 2024-04-29 13:21:44 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 12:g.92537706_92537707delinsAT;Error from VEP for: 12:g.92537706_92537707delinsAT | |
| [2024-04-29 13:21:45,220] {utils.py:315} DEBUG - 2024-04-29 13:21:44 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 12:g.92537707T>T;Error from VEP for: 12:g.92537707T>T | |
| [2024-04-29 13:21:45,221] {utils.py:315} DEBUG - 2024-04-29 13:21:44 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 12:g.92537707_92537708delinsTT;Error from VEP for: 12:g.92537707_92537708delinsTT | |
| [2024-04-29 13:21:45,221] {utils.py:315} DEBUG - 2024-04-29 13:21:44 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 12:g.92537707_92537709delinsTTT;Error from VEP for: 12:g.92537707_92537709delinsTTT | |
| [2024-04-29 13:21:45,221] {utils.py:315} DEBUG - 2024-04-29 13:21:44 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 12:g.92537707_92537711delinsTTTTT;Error from VEP for: 12:g.92537707_92537711delinsTTTTT | |
| [2024-04-29 13:21:45,221] {utils.py:315} DEBUG - 2024-04-29 13:21:44 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 12:g.92537965T>T;Error from VEP for: 12:g.92537965T>T | |
| [2024-04-29 13:21:45,221] {utils.py:315} DEBUG - 2024-04-29 13:21:44 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 12:g.98921672A>A;Error from VEP for: 12:g.98921672A>A | |
| [2024-04-29 13:21:45,221] {utils.py:315} DEBUG - 2024-04-29 13:21:44 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 12:g.98926622_98926626delinsAAGTG;Error from VEP for: 12:g.98926622_98926626delinsAAGTG | |
| [2024-04-29 13:21:45,221] {utils.py:315} DEBUG - 2024-04-29 13:21:45 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 12:g.98928073_98928075delinsGGA;Error from VEP for: 12:g.98928073_98928075delinsGGA | |
| [2024-04-29 13:21:46,513] {utils.py:315} DEBUG - 2024-04-29 13:21:45 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 12:g.98928162A>A;Error from VEP for: 12:g.98928162A>A | |
| [2024-04-29 13:21:46,513] {utils.py:315} DEBUG - 2024-04-29 13:21:45 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 12:g.98941486A>A;Error from VEP for: 12:g.98941486A>A | |
| [2024-04-29 13:21:46,513] {utils.py:315} DEBUG - 2024-04-29 13:21:45 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 12:g.99056326_99056327delinsGT;Error from VEP for: 12:g.99056326_99056327delinsGT | |
| [2024-04-29 13:21:46,513] {utils.py:315} DEBUG - 2024-04-29 13:21:45 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 12:g.99071207A>A;Error from VEP for: 12:g.99071207A>A | |
| [2024-04-29 13:21:46,513] {utils.py:315} DEBUG - 2024-04-29 13:21:45 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 12:g.104326110_104326113delinsAGAG;Error from VEP for: 12:g.104326110_104326113delinsAGAG | |
| [2024-04-29 13:21:46,513] {utils.py:315} DEBUG - 2024-04-29 13:21:45 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 12:g.104331534A>A;Error from VEP for: 12:g.104331534A>A | |
| [2024-04-29 13:21:46,513] {utils.py:315} DEBUG - 2024-04-29 13:21:45 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 12:g.104341188_104341190delinsGAA;Error from VEP for: 12:g.104341188_104341190delinsGAA | |
| [2024-04-29 13:21:46,513] {utils.py:315} DEBUG - 2024-04-29 13:21:45 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 12:g.104341580A>A;Error from VEP for: 12:g.104341580A>A | |
| [2024-04-29 13:21:46,513] {utils.py:315} DEBUG - 2024-04-29 13:21:45 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 12:g.104341590T>T;Error from VEP for: 12:g.104341590T>T | |
| [2024-04-29 13:21:46,513] {utils.py:315} DEBUG - 2024-04-29 13:21:45 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 12:g.104341645_104341648delinsACTG;Error from VEP for: 12:g.104341645_104341648delinsACTG | |
| [2024-04-29 13:21:46,513] {utils.py:315} DEBUG - 2024-04-29 13:21:45 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 12:g.106460550C>C;Error from VEP for: 12:g.106460550C>C | |
| [2024-04-29 13:21:46,513] {utils.py:315} DEBUG - 2024-04-29 13:21:45 [main] INFO org.cbioportal.annotator.internal.GenomeNexusImpl - On record 14500 out of 116708, annotation 12% complete | |
| [2024-04-29 13:21:46,513] {utils.py:315} DEBUG - 2024-04-29 13:21:45 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 12:g.109577798G>G;Error from VEP for: 12:g.109577798G>G | |
| [2024-04-29 13:21:46,513] {utils.py:315} DEBUG - 2024-04-29 13:21:45 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 12:g.109661678_109661681delinsCAAA;Error from VEP for: 12:g.109661678_109661681delinsCAAA | |
| [2024-04-29 13:21:46,513] {utils.py:315} DEBUG - 2024-04-29 13:21:45 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 12:g.109671600C>C;Error from VEP for: 12:g.109671600C>C | |
| [2024-04-29 13:21:46,513] {utils.py:315} DEBUG - 2024-04-29 13:21:45 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 12:g.109684156T>T;Error from VEP for: 12:g.109684156T>T | |
| [2024-04-29 13:21:46,514] {utils.py:315} DEBUG - 2024-04-29 13:21:46 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 12:g.109926469A>A;Error from VEP for: 12:g.109926469A>A | |
| [2024-04-29 13:21:47,031] {utils.py:315} DEBUG - 2024-04-29 13:21:46 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 12:g.109939223G>G;Error from VEP for: 12:g.109939223G>G | |
| [2024-04-29 13:21:47,031] {utils.py:315} DEBUG - 2024-04-29 13:21:46 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 12:g.109959065T>T;Error from VEP for: 12:g.109959065T>T | |
| [2024-04-29 13:21:47,031] {utils.py:315} DEBUG - 2024-04-29 13:21:46 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 12:g.112330884T>T;Error from VEP for: 12:g.112330884T>T | |
| [2024-04-29 13:21:47,031] {utils.py:315} DEBUG - 2024-04-29 13:21:46 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 12:g.113515459_113515470delinsCGCCGGCGCCGC;Error from VEP for: 12:g.113515459_113515470delinsCGCCGGCGCCGC | |
| [2024-04-29 13:21:47,031] {utils.py:315} DEBUG - 2024-04-29 13:21:46 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 12:g.113532936C>C;Error from VEP for: 12:g.113532936C>C | |
| [2024-04-29 13:21:47,031] {utils.py:315} DEBUG - 2024-04-29 13:21:46 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 12:g.116429108T>T;Error from VEP for: 12:g.116429108T>T | |
| [2024-04-29 13:21:47,031] {utils.py:315} DEBUG - 2024-04-29 13:21:46 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 12:g.117977605G>G;Error from VEP for: 12:g.117977605G>G | |
| [2024-04-29 13:21:47,032] {utils.py:315} DEBUG - 2024-04-29 13:21:46 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 12:g.118199141_118199142delinsAC;Error from VEP for: 12:g.118199141_118199142delinsAC | |
| [2024-04-29 13:21:47,032] {utils.py:315} DEBUG - 2024-04-29 13:21:46 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 12:g.118298146G>G;Error from VEP for: 12:g.118298146G>G | |
| [2024-04-29 13:21:47,032] {utils.py:315} DEBUG - 2024-04-29 13:21:46 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 12:g.118588762_118588765delinsTTTT;Error from VEP for: 12:g.118588762_118588765delinsTTTT | |
| [2024-04-29 13:21:47,032] {utils.py:315} DEBUG - 2024-04-29 13:21:46 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 12:g.118588762_118588766delinsTTTTT;Error from VEP for: 12:g.118588762_118588766delinsTTTTT | |
| [2024-04-29 13:21:47,032] {utils.py:315} DEBUG - 2024-04-29 13:21:46 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 12:g.118588762_118588767delinsTTTTTT;Error from VEP for: 12:g.118588762_118588767delinsTTTTTT | |
| [2024-04-29 13:21:47,032] {utils.py:315} DEBUG - 2024-04-29 13:21:46 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 12:g.118588762_118588768delinsTTTTTTT;Error from VEP for: 12:g.118588762_118588768delinsTTTTTTT | |
| [2024-04-29 13:21:47,032] {utils.py:315} DEBUG - 2024-04-29 13:21:46 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 12:g.118588762_118588769delinsTTTTTTTT;Error from VEP for: 12:g.118588762_118588769delinsTTTTTTTT | |
| [2024-04-29 13:21:47,032] {utils.py:315} DEBUG - 2024-04-29 13:21:46 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 12:g.118693433T>T;Error from VEP for: 12:g.118693433T>T | |
| [2024-04-29 13:21:47,032] {utils.py:315} DEBUG - 2024-04-29 13:21:47 [main] INFO org.cbioportal.annotator.internal.GenomeNexusImpl - On record 15000 out of 116708, annotation 12% complete | |
| [2024-04-29 13:21:47,650] {utils.py:315} DEBUG - 2024-04-29 13:21:47 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 12:g.120662042G>G;Error from VEP for: 12:g.120662042G>G | |
| [2024-04-29 13:21:47,650] {utils.py:315} DEBUG - 2024-04-29 13:21:47 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 12:g.121432115G>G;Error from VEP for: 12:g.121432115G>G | |
| [2024-04-29 13:21:47,650] {utils.py:315} DEBUG - 2024-04-29 13:21:47 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 12:g.121432118C>C;Error from VEP for: 12:g.121432118C>C | |
| [2024-04-29 13:21:47,651] {utils.py:315} DEBUG - 2024-04-29 13:21:47 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 12:g.121434356G>G;Error from VEP for: 12:g.121434356G>G | |
| [2024-04-29 13:21:47,651] {utils.py:315} DEBUG - 2024-04-29 13:21:47 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 12:g.121600317C>C;Error from VEP for: 12:g.121600317C>C | |
| [2024-04-29 13:21:48,519] {utils.py:315} DEBUG - 2024-04-29 13:21:47 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 12:g.121622165C>C;Error from VEP for: 12:g.121622165C>C | |
| [2024-04-29 13:21:48,519] {utils.py:315} DEBUG - 2024-04-29 13:21:47 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 12:g.121622236C>C;Error from VEP for: 12:g.121622236C>C | |
| [2024-04-29 13:21:48,519] {utils.py:315} DEBUG - 2024-04-29 13:21:47 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 12:g.121698205A>A;Error from VEP for: 12:g.121698205A>A | |
| [2024-04-29 13:21:48,519] {utils.py:315} DEBUG - 2024-04-29 13:21:47 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 12:g.121765939A>A;Error from VEP for: 12:g.121765939A>A | |
| [2024-04-29 13:21:48,520] {utils.py:315} DEBUG - 2024-04-29 13:21:47 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 12:g.121790193_121790195delinsCAC;Error from VEP for: 12:g.121790193_121790195delinsCAC | |
| [2024-04-29 13:21:48,520] {utils.py:315} DEBUG - 2024-04-29 13:21:47 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 12:g.122692889C>C;Error from VEP for: 12:g.122692889C>C | |
| [2024-04-29 13:21:48,520] {utils.py:315} DEBUG - 2024-04-29 13:21:47 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 12:g.132394804T>T;Error from VEP for: 12:g.132394804T>T | |
| [2024-04-29 13:21:48,520] {utils.py:315} DEBUG - 2024-04-29 13:21:47 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 13:g.20580662T>T;Error from VEP for: 13:g.20580662T>T | |
| [2024-04-29 13:21:48,520] {utils.py:315} DEBUG - 2024-04-29 13:21:47 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 13:g.20611023A>A;Error from VEP for: 13:g.20611023A>A | |
| [2024-04-29 13:21:48,520] {utils.py:315} DEBUG - 2024-04-29 13:21:47 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 13:g.20638677A>A;Error from VEP for: 13:g.20638677A>A | |
| [2024-04-29 13:21:48,520] {utils.py:315} DEBUG - 2024-04-29 13:21:47 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 13:g.20638677_20638678delinsAA;Error from VEP for: 13:g.20638677_20638678delinsAA | |
| [2024-04-29 13:21:48,520] {utils.py:315} DEBUG - 2024-04-29 13:21:47 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 13:g.20657094A>A;Error from VEP for: 13:g.20657094A>A | |
| [2024-04-29 13:21:48,520] {utils.py:315} DEBUG - 2024-04-29 13:21:47 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 13:g.20657094_20657095delinsAA;Error from VEP for: 13:g.20657094_20657095delinsAA | |
| [2024-04-29 13:21:48,520] {utils.py:315} DEBUG - 2024-04-29 13:21:47 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 13:g.21362689T>T;Error from VEP for: 13:g.21362689T>T | |
| [2024-04-29 13:21:48,520] {utils.py:315} DEBUG - 2024-04-29 13:21:47 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 13:g.21371027A>A;Error from VEP for: 13:g.21371027A>A | |
| [2024-04-29 13:21:48,520] {utils.py:315} DEBUG - 2024-04-29 13:21:47 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 13:g.21436900_21436901delinsCT;Error from VEP for: 13:g.21436900_21436901delinsCT | |
| [2024-04-29 13:21:48,520] {utils.py:315} DEBUG - 2024-04-29 13:21:47 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 13:g.21436912T>T;Error from VEP for: 13:g.21436912T>T | |
| [2024-04-29 13:21:48,520] {utils.py:315} DEBUG - 2024-04-29 13:21:47 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 13:g.21437114T>T;Error from VEP for: 13:g.21437114T>T | |
| [2024-04-29 13:21:48,520] {utils.py:315} DEBUG - 2024-04-29 13:21:48 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 13:g.21553861A>A;Error from VEP for: 13:g.21553861A>A | |
| [2024-04-29 13:21:49,405] {utils.py:315} DEBUG - 2024-04-29 13:21:48 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 13:g.21619935C>C;Error from VEP for: 13:g.21619935C>C | |
| [2024-04-29 13:21:49,406] {utils.py:315} DEBUG - 2024-04-29 13:21:48 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 13:g.21620223A>A;Error from VEP for: 13:g.21620223A>A | |
| [2024-04-29 13:21:49,406] {utils.py:315} DEBUG - 2024-04-29 13:21:48 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 13:g.21620223_21620224delinsAA;Error from VEP for: 13:g.21620223_21620224delinsAA | |
| [2024-04-29 13:21:49,406] {utils.py:315} DEBUG - 2024-04-29 13:21:48 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 13:g.23904255T>T;Error from VEP for: 13:g.23904255T>T | |
| [2024-04-29 13:21:49,406] {utils.py:315} DEBUG - 2024-04-29 13:21:48 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 13:g.23905377_23905378delinsTC;Error from VEP for: 13:g.23905377_23905378delinsTC | |
| [2024-04-29 13:21:49,406] {utils.py:315} DEBUG - 2024-04-29 13:21:48 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 13:g.23905486A>A;Error from VEP for: 13:g.23905486A>A | |
| [2024-04-29 13:21:49,406] {utils.py:315} DEBUG - 2024-04-29 13:21:48 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 13:g.23907294T>T;Error from VEP for: 13:g.23907294T>T | |
| [2024-04-29 13:21:49,406] {utils.py:315} DEBUG - 2024-04-29 13:21:48 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 13:g.23909222T>T;Error from VEP for: 13:g.23909222T>T | |
| [2024-04-29 13:21:49,406] {utils.py:315} DEBUG - 2024-04-29 13:21:48 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 13:g.23911843A>A;Error from VEP for: 13:g.23911843A>A | |
| [2024-04-29 13:21:49,406] {utils.py:315} DEBUG - 2024-04-29 13:21:48 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 13:g.23912669A>A;Error from VEP for: 13:g.23912669A>A | |
| [2024-04-29 13:21:49,406] {utils.py:315} DEBUG - 2024-04-29 13:21:48 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 13:g.23912864T>T;Error from VEP for: 13:g.23912864T>T | |
| [2024-04-29 13:21:49,406] {utils.py:315} DEBUG - 2024-04-29 13:21:48 [main] INFO org.cbioportal.annotator.internal.GenomeNexusImpl - On record 15500 out of 116708, annotation 13% complete | |
| [2024-04-29 13:21:49,406] {utils.py:315} DEBUG - 2024-04-29 13:21:48 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 13:g.23914687T>T;Error from VEP for: 13:g.23914687T>T | |
| [2024-04-29 13:21:49,406] {utils.py:315} DEBUG - 2024-04-29 13:21:48 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 13:g.23915644A>A;Error from VEP for: 13:g.23915644A>A | |
| [2024-04-29 13:21:49,406] {utils.py:315} DEBUG - 2024-04-29 13:21:48 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 13:g.23942575A>A;Error from VEP for: 13:g.23942575A>A | |
| [2024-04-29 13:21:49,406] {utils.py:315} DEBUG - 2024-04-29 13:21:48 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 13:g.23985503A>A;Error from VEP for: 13:g.23985503A>A | |
| [2024-04-29 13:21:49,406] {utils.py:315} DEBUG - 2024-04-29 13:21:48 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 13:g.26975408T>T;Error from VEP for: 13:g.26975408T>T | |
| [2024-04-29 13:21:49,406] {utils.py:315} DEBUG - 2024-04-29 13:21:48 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 13:g.28133980T>T;Error from VEP for: 13:g.28133980T>T | |
| [2024-04-29 13:21:49,406] {utils.py:315} DEBUG - 2024-04-29 13:21:48 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 13:g.28537278C>C;Error from VEP for: 13:g.28537278C>C | |
| [2024-04-29 13:21:49,406] {utils.py:315} DEBUG - 2024-04-29 13:21:48 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 13:g.28578215_28578216delinsGA;Error from VEP for: 13:g.28578215_28578216delinsGA | |
| [2024-04-29 13:21:49,406] {utils.py:315} DEBUG - 2024-04-29 13:21:49 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 13:g.28964154A>A;Error from VEP for: 13:g.28964154A>A | |
| [2024-04-29 13:21:50,774] {utils.py:315} DEBUG - 2024-04-29 13:21:49 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 13:g.28964206T>T;Error from VEP for: 13:g.28964206T>T | |
| [2024-04-29 13:21:50,774] {utils.py:315} DEBUG - 2024-04-29 13:21:49 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 13:g.29012359T>T;Error from VEP for: 13:g.29012359T>T | |
| [2024-04-29 13:21:50,774] {utils.py:315} DEBUG - 2024-04-29 13:21:49 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 13:g.29599699G>G;Error from VEP for: 13:g.29599699G>G | |
| [2024-04-29 13:21:50,774] {utils.py:315} DEBUG - 2024-04-29 13:21:49 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 13:g.29600993C>C;Error from VEP for: 13:g.29600993C>C | |
| [2024-04-29 13:21:50,774] {utils.py:315} DEBUG - 2024-04-29 13:21:49 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 13:g.30002788_30002790delinsCTC;Error from VEP for: 13:g.30002788_30002790delinsCTC | |
| [2024-04-29 13:21:50,774] {utils.py:315} DEBUG - 2024-04-29 13:21:49 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 13:g.30077301G>G;Error from VEP for: 13:g.30077301G>G | |
| [2024-04-29 13:21:50,774] {utils.py:315} DEBUG - 2024-04-29 13:21:49 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 13:g.32893309A>A;Error from VEP for: 13:g.32893309A>A | |
| [2024-04-29 13:21:50,774] {utils.py:315} DEBUG - 2024-04-29 13:21:49 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 13:g.32906536T>T;Error from VEP for: 13:g.32906536T>T | |
| [2024-04-29 13:21:50,774] {utils.py:315} DEBUG - 2024-04-29 13:21:49 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 13:g.32907421A>A;Error from VEP for: 13:g.32907421A>A | |
| [2024-04-29 13:21:50,774] {utils.py:315} DEBUG - 2024-04-29 13:21:49 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 13:g.32912090_32912091delinsTG;Error from VEP for: 13:g.32912090_32912091delinsTG | |
| [2024-04-29 13:21:50,774] {utils.py:315} DEBUG - 2024-04-29 13:21:49 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 13:g.32912346A>A;Error from VEP for: 13:g.32912346A>A | |
| [2024-04-29 13:21:50,774] {utils.py:315} DEBUG - 2024-04-29 13:21:49 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 13:g.32913042_32913051delinsAAGAACCTAC;Error from VEP for: 13:g.32913042_32913051delinsAAGAACCTAC | |
| [2024-04-29 13:21:50,774] {utils.py:315} DEBUG - 2024-04-29 13:21:49 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 13:g.32913559A>A;Error from VEP for: 13:g.32913559A>A | |
| [2024-04-29 13:21:50,774] {utils.py:315} DEBUG - 2024-04-29 13:21:49 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 13:g.32913837A>A;Error from VEP for: 13:g.32913837A>A | |
| [2024-04-29 13:21:50,774] {utils.py:315} DEBUG - 2024-04-29 13:21:49 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 13:g.32914070A>A;Error from VEP for: 13:g.32914070A>A | |
| [2024-04-29 13:21:50,774] {utils.py:315} DEBUG - 2024-04-29 13:21:49 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 13:g.32954023A>A;Error from VEP for: 13:g.32954023A>A | |
| [2024-04-29 13:21:50,774] {utils.py:315} DEBUG - 2024-04-29 13:21:49 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 13:g.32972893A>A;Error from VEP for: 13:g.32972893A>A | |
| [2024-04-29 13:21:50,774] {utils.py:315} DEBUG - 2024-04-29 13:21:49 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 13:g.36348616A>A;Error from VEP for: 13:g.36348616A>A | |
| [2024-04-29 13:21:50,774] {utils.py:315} DEBUG - 2024-04-29 13:21:49 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 13:g.37006866G>G;Error from VEP for: 13:g.37006866G>G | |
| [2024-04-29 13:21:50,774] {utils.py:315} DEBUG - 2024-04-29 13:21:49 [main] INFO org.cbioportal.annotator.internal.GenomeNexusImpl - On record 16000 out of 116708, annotation 13% complete | |
| [2024-04-29 13:21:50,774] {utils.py:315} DEBUG - 2024-04-29 13:21:49 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 13:g.37679381_37679383delinsTGT;Error from VEP for: 13:g.37679381_37679383delinsTGT | |
| [2024-04-29 13:21:50,774] {utils.py:315} DEBUG - 2024-04-29 13:21:49 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 13:g.39917882T>T;Error from VEP for: 13:g.39917882T>T | |
| [2024-04-29 13:21:50,774] {utils.py:315} DEBUG - 2024-04-29 13:21:49 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 13:g.39917882_39917883delinsTT;Error from VEP for: 13:g.39917882_39917883delinsTT | |
| [2024-04-29 13:21:50,774] {utils.py:315} DEBUG - 2024-04-29 13:21:49 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 13:g.41134007G>G;Error from VEP for: 13:g.41134007G>G | |
| [2024-04-29 13:21:50,774] {utils.py:315} DEBUG - 2024-04-29 13:21:49 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 13:g.41642791A>A;Error from VEP for: 13:g.41642791A>A | |
| [2024-04-29 13:21:50,774] {utils.py:315} DEBUG - 2024-04-29 13:21:49 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 13:g.41650183C>C;Error from VEP for: 13:g.41650183C>C | |
| [2024-04-29 13:21:50,774] {utils.py:315} DEBUG - 2024-04-29 13:21:50 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 13:g.46733797T>T;Error from VEP for: 13:g.46733797T>T | |
| [2024-04-29 13:21:52,350] {utils.py:315} DEBUG - 2024-04-29 13:21:50 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 13:g.48881489_48881490delinsAG;Error from VEP for: 13:g.48881489_48881490delinsAG | |
| [2024-04-29 13:21:52,351] {utils.py:315} DEBUG - 2024-04-29 13:21:50 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 13:g.48934152G>G;Error from VEP for: 13:g.48934152G>G | |
| [2024-04-29 13:21:52,351] {utils.py:315} DEBUG - 2024-04-29 13:21:50 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 13:g.48939048A>A;Error from VEP for: 13:g.48939048A>A | |
| [2024-04-29 13:21:52,351] {utils.py:315} DEBUG - 2024-04-29 13:21:50 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 13:g.48941701G>G;Error from VEP for: 13:g.48941701G>G | |
| [2024-04-29 13:21:52,351] {utils.py:315} DEBUG - 2024-04-29 13:21:50 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 13:g.48941711_48941712delinsAA;Error from VEP for: 13:g.48941711_48941712delinsAA | |
| [2024-04-29 13:21:52,351] {utils.py:315} DEBUG - 2024-04-29 13:21:50 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 13:g.48947615T>T;Error from VEP for: 13:g.48947615T>T | |
| [2024-04-29 13:21:52,351] {utils.py:315} DEBUG - 2024-04-29 13:21:50 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 13:g.48954315_48954317delinsACA;Error from VEP for: 13:g.48954315_48954317delinsACA | |
| [2024-04-29 13:21:52,351] {utils.py:315} DEBUG - 2024-04-29 13:21:50 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 13:g.48955432_48955437delinsGATTCT;Error from VEP for: 13:g.48955432_48955437delinsGATTCT | |
| [2024-04-29 13:21:52,351] {utils.py:315} DEBUG - 2024-04-29 13:21:50 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 13:g.49030479A>A;Error from VEP for: 13:g.49030479A>A | |
| [2024-04-29 13:21:52,351] {utils.py:315} DEBUG - 2024-04-29 13:21:50 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 13:g.49039128_49039134delinsCCTCAGA;Error from VEP for: 13:g.49039128_49039134delinsCCTCAGA | |
| [2024-04-29 13:21:52,351] {utils.py:315} DEBUG - 2024-04-29 13:21:50 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 13:g.49051540_49051543delinsAGTA;Error from VEP for: 13:g.49051540_49051543delinsAGTA | |
| [2024-04-29 13:21:52,351] {utils.py:315} DEBUG - 2024-04-29 13:21:50 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 13:g.49054323T>T;Error from VEP for: 13:g.49054323T>T | |
| [2024-04-29 13:21:52,351] {utils.py:315} DEBUG - 2024-04-29 13:21:50 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 13:g.49064021T>T;Error from VEP for: 13:g.49064021T>T | |
| [2024-04-29 13:21:52,351] {utils.py:315} DEBUG - 2024-04-29 13:21:50 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 13:g.49086154C>C;Error from VEP for: 13:g.49086154C>C | |
| [2024-04-29 13:21:52,351] {utils.py:315} DEBUG - 2024-04-29 13:21:50 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 13:g.49089392T>T;Error from VEP for: 13:g.49089392T>T | |
| [2024-04-29 13:21:52,351] {utils.py:315} DEBUG - 2024-04-29 13:21:50 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 13:g.52639269_52639270delinsAA;Error from VEP for: 13:g.52639269_52639270delinsAA | |
| [2024-04-29 13:21:52,351] {utils.py:315} DEBUG - 2024-04-29 13:21:50 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 13:g.52639298C>C;Error from VEP for: 13:g.52639298C>C | |
| [2024-04-29 13:21:52,351] {utils.py:315} DEBUG - 2024-04-29 13:21:50 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 13:g.52710307_52710308delinsTG;Error from VEP for: 13:g.52710307_52710308delinsTG | |
| [2024-04-29 13:21:52,351] {utils.py:315} DEBUG - 2024-04-29 13:21:52 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 13:g.72014626T>T;Error from VEP for: 13:g.72014626T>T | |
| [2024-04-29 13:21:53,400] {utils.py:315} DEBUG - 2024-04-29 13:21:52 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 13:g.72014626_72014627delinsTT;Error from VEP for: 13:g.72014626_72014627delinsTT | |
| [2024-04-29 13:21:53,400] {utils.py:315} DEBUG - 2024-04-29 13:21:52 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 13:g.72014626_72014628delinsTTT;Error from VEP for: 13:g.72014626_72014628delinsTTT | |
| [2024-04-29 13:21:53,401] {utils.py:315} DEBUG - 2024-04-29 13:21:52 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 13:g.72014707T>T;Error from VEP for: 13:g.72014707T>T | |
| [2024-04-29 13:21:53,401] {utils.py:315} DEBUG - 2024-04-29 13:21:52 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 13:g.72014716G>G;Error from VEP for: 13:g.72014716G>G | |
| [2024-04-29 13:21:53,401] {utils.py:315} DEBUG - 2024-04-29 13:21:52 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 13:g.72053363A>A;Error from VEP for: 13:g.72053363A>A | |
| [2024-04-29 13:21:53,401] {utils.py:315} DEBUG - 2024-04-29 13:21:52 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 13:g.72440098G>G;Error from VEP for: 13:g.72440098G>G | |
| [2024-04-29 13:21:53,401] {utils.py:315} DEBUG - 2024-04-29 13:21:52 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 13:g.72440145_72440154delinsCCCTCAGGAT;Error from VEP for: 13:g.72440145_72440154delinsCCCTCAGGAT | |
| [2024-04-29 13:21:53,401] {utils.py:315} DEBUG - 2024-04-29 13:21:52 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 13:g.72440403G>G;Error from VEP for: 13:g.72440403G>G | |
| [2024-04-29 13:21:53,401] {utils.py:315} DEBUG - 2024-04-29 13:21:52 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 13:g.78475267A>A;Error from VEP for: 13:g.78475267A>A | |
| [2024-04-29 13:21:53,401] {utils.py:315} DEBUG - 2024-04-29 13:21:52 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 13:g.80910842A>A;Error from VEP for: 13:g.80910842A>A | |
| [2024-04-29 13:21:53,401] {utils.py:315} DEBUG - 2024-04-29 13:21:52 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 13:g.95673734_95673738delinsTTTGT;Error from VEP for: 13:g.95673734_95673738delinsTTTGT | |
| [2024-04-29 13:21:53,401] {utils.py:315} DEBUG - 2024-04-29 13:21:52 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 13:g.95673748A>A;Error from VEP for: 13:g.95673748A>A | |
| [2024-04-29 13:21:53,401] {utils.py:315} DEBUG - 2024-04-29 13:21:52 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 13:g.95696016T>T;Error from VEP for: 13:g.95696016T>T | |
| [2024-04-29 13:21:53,401] {utils.py:315} DEBUG - 2024-04-29 13:21:52 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 13:g.95735432A>A;Error from VEP for: 13:g.95735432A>A | |
| [2024-04-29 13:21:53,401] {utils.py:315} DEBUG - 2024-04-29 13:21:52 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 13:g.95748195A>A;Error from VEP for: 13:g.95748195A>A | |
| [2024-04-29 13:21:53,401] {utils.py:315} DEBUG - 2024-04-29 13:21:52 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 13:g.99105395G>G;Error from VEP for: 13:g.99105395G>G | |
| [2024-04-29 13:21:53,401] {utils.py:315} DEBUG - 2024-04-29 13:21:52 [main] INFO org.cbioportal.annotator.internal.GenomeNexusImpl - On record 16500 out of 116708, annotation 14% complete | |
| [2024-04-29 13:21:53,401] {utils.py:315} DEBUG - 2024-04-29 13:21:52 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 13:g.99174282G>G;Error from VEP for: 13:g.99174282G>G | |
| [2024-04-29 13:21:53,401] {utils.py:315} DEBUG - 2024-04-29 13:21:52 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 13:g.99948213T>T;Error from VEP for: 13:g.99948213T>T | |
| [2024-04-29 13:21:53,401] {utils.py:315} DEBUG - 2024-04-29 13:21:52 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 13:g.103504578T>T;Error from VEP for: 13:g.103504578T>T | |
| [2024-04-29 13:21:53,401] {utils.py:315} DEBUG - 2024-04-29 13:21:52 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 13:g.103506652_103506660delinsCCAGTCTTA;Error from VEP for: 13:g.103506652_103506660delinsCCAGTCTTA | |
| [2024-04-29 13:21:53,401] {utils.py:315} DEBUG - 2024-04-29 13:21:52 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 13:g.103510739_103510741delinsAGA;Error from VEP for: 13:g.103510739_103510741delinsAGA | |
| [2024-04-29 13:21:53,401] {utils.py:315} DEBUG - 2024-04-29 13:21:52 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 13:g.103524568A>A;Error from VEP for: 13:g.103524568A>A | |
| [2024-04-29 13:21:53,401] {utils.py:315} DEBUG - 2024-04-29 13:21:52 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 13:g.103524612A>A;Error from VEP for: 13:g.103524612A>A | |
| [2024-04-29 13:21:53,401] {utils.py:315} DEBUG - 2024-04-29 13:21:52 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 13:g.103528275_103528278delinsTAAT;Error from VEP for: 13:g.103528275_103528278delinsTAAT | |
| [2024-04-29 13:21:53,401] {utils.py:315} DEBUG - 2024-04-29 13:21:52 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 13:g.111366381G>G;Error from VEP for: 13:g.111366381G>G | |
| [2024-04-29 13:21:53,401] {utils.py:315} DEBUG - 2024-04-29 13:21:52 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 13:g.111367630A>A;Error from VEP for: 13:g.111367630A>A | |
| [2024-04-29 13:21:53,401] {utils.py:315} DEBUG - 2024-04-29 13:21:52 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 13:g.111367771C>C;Error from VEP for: 13:g.111367771C>C | |
| [2024-04-29 13:21:53,401] {utils.py:315} DEBUG - 2024-04-29 13:21:52 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 13:g.111372003_111372004delinsGC;Error from VEP for: 13:g.111372003_111372004delinsGC | |
| [2024-04-29 13:21:53,401] {utils.py:315} DEBUG - 2024-04-29 13:21:52 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 13:g.111767934A>A;Error from VEP for: 13:g.111767934A>A | |
| [2024-04-29 13:21:53,401] {utils.py:315} DEBUG - 2024-04-29 13:21:52 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 13:g.111953132_111953134delinsAGA;Error from VEP for: 13:g.111953132_111953134delinsAGA | |
| [2024-04-29 13:21:53,401] {utils.py:315} DEBUG - 2024-04-29 13:21:53 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 13:g.113536240_113536241delinsCT;Error from VEP for: 13:g.113536240_113536241delinsCT | |
| [2024-04-29 13:21:55,172] {utils.py:315} DEBUG - 2024-04-29 13:21:53 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 13:g.113536404_113536405delinsTG;Error from VEP for: 13:g.113536404_113536405delinsTG | |
| [2024-04-29 13:21:55,172] {utils.py:315} DEBUG - 2024-04-29 13:21:53 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 13:g.113536498_113536499delinsTG;Error from VEP for: 13:g.113536498_113536499delinsTG | |
| [2024-04-29 13:21:55,172] {utils.py:315} DEBUG - 2024-04-29 13:21:53 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 13:g.114288284_114288286delinsAGA;Error from VEP for: 13:g.114288284_114288286delinsAGA | |
| [2024-04-29 13:21:55,172] {utils.py:315} DEBUG - 2024-04-29 13:21:53 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 13:g.114290967A>A;Error from VEP for: 13:g.114290967A>A | |
| [2024-04-29 13:21:55,172] {utils.py:315} DEBUG - 2024-04-29 13:21:53 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 13:g.114294635T>T;Error from VEP for: 13:g.114294635T>T | |
| [2024-04-29 13:21:55,172] {utils.py:315} DEBUG - 2024-04-29 13:21:53 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 13:g.114748807A>A;Error from VEP for: 13:g.114748807A>A | |
| [2024-04-29 13:21:55,172] {utils.py:315} DEBUG - 2024-04-29 13:21:53 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 13:g.114780718_114780720delinsAGA;Error from VEP for: 13:g.114780718_114780720delinsAGA | |
| [2024-04-29 13:21:55,172] {utils.py:315} DEBUG - 2024-04-29 13:21:53 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 14:g.20779552T>T;Error from VEP for: 14:g.20779552T>T | |
| [2024-04-29 13:21:55,172] {utils.py:315} DEBUG - 2024-04-29 13:21:53 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 14:g.21780627A>A;Error from VEP for: 14:g.21780627A>A | |
| [2024-04-29 13:21:55,172] {utils.py:315} DEBUG - 2024-04-29 13:21:53 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 14:g.21798427G>G;Error from VEP for: 14:g.21798427G>G | |
| [2024-04-29 13:21:55,172] {utils.py:315} DEBUG - 2024-04-29 13:21:53 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 14:g.21853630T>T;Error from VEP for: 14:g.21853630T>T | |
| [2024-04-29 13:21:55,172] {utils.py:315} DEBUG - 2024-04-29 13:21:53 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 14:g.21853630_21853631delinsTT;Error from VEP for: 14:g.21853630_21853631delinsTT | |
| [2024-04-29 13:21:55,172] {utils.py:315} DEBUG - 2024-04-29 13:21:53 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 14:g.21853630_21853632delinsTTT;Error from VEP for: 14:g.21853630_21853632delinsTTT | |
| [2024-04-29 13:21:55,172] {utils.py:315} DEBUG - 2024-04-29 13:21:53 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 14:g.21853630_21853633delinsTTTT;Error from VEP for: 14:g.21853630_21853633delinsTTTT | |
| [2024-04-29 13:21:55,172] {utils.py:315} DEBUG - 2024-04-29 13:21:53 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 14:g.21853630_21853634delinsTTTTT;Error from VEP for: 14:g.21853630_21853634delinsTTTTT | |
| [2024-04-29 13:21:55,172] {utils.py:315} DEBUG - 2024-04-29 13:21:53 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 14:g.21853630_21853635delinsTTTTTT;Error from VEP for: 14:g.21853630_21853635delinsTTTTTT | |
| [2024-04-29 13:21:55,172] {utils.py:315} DEBUG - 2024-04-29 13:21:53 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 14:g.21854277_21854278delinsCT;Error from VEP for: 14:g.21854277_21854278delinsCT | |
| [2024-04-29 13:21:55,172] {utils.py:315} DEBUG - 2024-04-29 13:21:53 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 14:g.21859176T>T;Error from VEP for: 14:g.21859176T>T | |
| [2024-04-29 13:21:55,172] {utils.py:315} DEBUG - 2024-04-29 13:21:53 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 14:g.21859633G>G;Error from VEP for: 14:g.21859633G>G | |
| [2024-04-29 13:21:55,172] {utils.py:315} DEBUG - 2024-04-29 13:21:53 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 14:g.21860016_21860018delinsCTT;Error from VEP for: 14:g.21860016_21860018delinsCTT | |
| [2024-04-29 13:21:55,172] {utils.py:315} DEBUG - 2024-04-29 13:21:53 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 14:g.21861700_21861702delinsGAA;Error from VEP for: 14:g.21861700_21861702delinsGAA | |
| [2024-04-29 13:21:55,172] {utils.py:315} DEBUG - 2024-04-29 13:21:53 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 14:g.21861813G>G;Error from VEP for: 14:g.21861813G>G | |
| [2024-04-29 13:21:55,172] {utils.py:315} DEBUG - 2024-04-29 13:21:53 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 14:g.21861876_21861881delinsTAGCTT;Error from VEP for: 14:g.21861876_21861881delinsTAGCTT | |
| [2024-04-29 13:21:55,172] {utils.py:315} DEBUG - 2024-04-29 13:21:53 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 14:g.21869596T>T;Error from VEP for: 14:g.21869596T>T | |
| [2024-04-29 13:21:55,172] {utils.py:315} DEBUG - 2024-04-29 13:21:53 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 14:g.21871808T>T;Error from VEP for: 14:g.21871808T>T | |
| [2024-04-29 13:21:55,172] {utils.py:315} DEBUG - 2024-04-29 13:21:53 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 14:g.21884031T>T;Error from VEP for: 14:g.21884031T>T | |
| [2024-04-29 13:21:55,173] {utils.py:315} DEBUG - 2024-04-29 13:21:53 [main] INFO org.cbioportal.annotator.internal.GenomeNexusImpl - On record 17000 out of 116708, annotation 14% complete | |
| [2024-04-29 13:21:55,173] {utils.py:315} DEBUG - 2024-04-29 13:21:53 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 14:g.22133493T>T;Error from VEP for: 14:g.22133493T>T | |
| [2024-04-29 13:21:55,173] {utils.py:315} DEBUG - 2024-04-29 13:21:53 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 14:g.22133746G>G;Error from VEP for: 14:g.22133746G>G | |
| [2024-04-29 13:21:55,173] {utils.py:315} DEBUG - 2024-04-29 13:21:53 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 14:g.22133806C>C;Error from VEP for: 14:g.22133806C>C | |
| [2024-04-29 13:21:55,173] {utils.py:315} DEBUG - 2024-04-29 13:21:53 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 14:g.24675128_24675129delinsCC;Error from VEP for: 14:g.24675128_24675129delinsCC | |
| [2024-04-29 13:21:55,173] {utils.py:315} DEBUG - 2024-04-29 13:21:53 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 14:g.24677344_24677346delinsACG;Error from VEP for: 14:g.24677344_24677346delinsACG | |
| [2024-04-29 13:21:55,173] {utils.py:315} DEBUG - 2024-04-29 13:21:53 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 14:g.24805280_24805282delinsGTT;Error from VEP for: 14:g.24805280_24805282delinsGTT | |
| [2024-04-29 13:21:55,173] {utils.py:315} DEBUG - 2024-04-29 13:21:53 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 14:g.24805463G>G;Error from VEP for: 14:g.24805463G>G | |
| [2024-04-29 13:21:55,173] {utils.py:315} DEBUG - 2024-04-29 13:21:53 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 14:g.24807186A>A;Error from VEP for: 14:g.24807186A>A | |
| [2024-04-29 13:21:55,173] {utils.py:315} DEBUG - 2024-04-29 13:21:55 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 14:g.24807831A>A;Error from VEP for: 14:g.24807831A>A | |
| [2024-04-29 13:21:56,850] {utils.py:315} DEBUG - 2024-04-29 13:21:55 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 14:g.24808102_24808103delinsAG;Error from VEP for: 14:g.24808102_24808103delinsAG | |
| [2024-04-29 13:21:56,850] {utils.py:315} DEBUG - 2024-04-29 13:21:55 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 14:g.24809188C>C;Error from VEP for: 14:g.24809188C>C | |
| [2024-04-29 13:21:56,850] {utils.py:315} DEBUG - 2024-04-29 13:21:55 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 14:g.24877215C>C;Error from VEP for: 14:g.24877215C>C | |
| [2024-04-29 13:21:56,850] {utils.py:315} DEBUG - 2024-04-29 13:21:55 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 14:g.24878306G>G;Error from VEP for: 14:g.24878306G>G | |
| [2024-04-29 13:21:56,850] {utils.py:315} DEBUG - 2024-04-29 13:21:55 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 14:g.24880297_24880299delinsCTT;Error from VEP for: 14:g.24880297_24880299delinsCTT | |
| [2024-04-29 13:21:56,850] {utils.py:315} DEBUG - 2024-04-29 13:21:55 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 14:g.24884963C>C;Error from VEP for: 14:g.24884963C>C | |
| [2024-04-29 13:21:56,850] {utils.py:315} DEBUG - 2024-04-29 13:21:55 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 14:g.24885305G>G;Error from VEP for: 14:g.24885305G>G | |
| [2024-04-29 13:21:56,850] {utils.py:315} DEBUG - 2024-04-29 13:21:55 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 14:g.33014828G>G;Error from VEP for: 14:g.33014828G>G | |
| [2024-04-29 13:21:56,851] {utils.py:315} DEBUG - 2024-04-29 13:21:55 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 14:g.33016139A>A;Error from VEP for: 14:g.33016139A>A | |
| [2024-04-29 13:21:56,851] {utils.py:315} DEBUG - 2024-04-29 13:21:55 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 14:g.33201693A>A;Error from VEP for: 14:g.33201693A>A | |
| [2024-04-29 13:21:56,851] {utils.py:315} DEBUG - 2024-04-29 13:21:55 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 14:g.33201983T>T;Error from VEP for: 14:g.33201983T>T | |
| [2024-04-29 13:21:56,851] {utils.py:315} DEBUG - 2024-04-29 13:21:55 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 14:g.33201983_33201984delinsTT;Error from VEP for: 14:g.33201983_33201984delinsTT | |
| [2024-04-29 13:21:56,851] {utils.py:315} DEBUG - 2024-04-29 13:21:55 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 14:g.33291267G>G;Error from VEP for: 14:g.33291267G>G | |
| [2024-04-29 13:21:56,851] {utils.py:315} DEBUG - 2024-04-29 13:21:55 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 14:g.33292931A>A;Error from VEP for: 14:g.33292931A>A | |
| [2024-04-29 13:21:56,851] {utils.py:315} DEBUG - 2024-04-29 13:21:55 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 14:g.35871136_35871138delinsTTC;Error from VEP for: 14:g.35871136_35871138delinsTTC | |
| [2024-04-29 13:21:56,851] {utils.py:315} DEBUG - 2024-04-29 13:21:55 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 14:g.35871169T>T;Error from VEP for: 14:g.35871169T>T | |
| [2024-04-29 13:21:56,851] {utils.py:315} DEBUG - 2024-04-29 13:21:55 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 14:g.35871169_35871170delinsTT;Error from VEP for: 14:g.35871169_35871170delinsTT | |
| [2024-04-29 13:21:56,851] {utils.py:315} DEBUG - 2024-04-29 13:21:55 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 14:g.35871610_35871618delinsGTGAACTCC;Error from VEP for: 14:g.35871610_35871618delinsGTGAACTCC | |
| [2024-04-29 13:21:56,851] {utils.py:315} DEBUG - 2024-04-29 13:21:55 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 14:g.36768285T>T;Error from VEP for: 14:g.36768285T>T | |
| [2024-04-29 13:21:56,851] {utils.py:315} DEBUG - 2024-04-29 13:21:55 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 14:g.36784114A>A;Error from VEP for: 14:g.36784114A>A | |
| [2024-04-29 13:21:56,851] {utils.py:315} DEBUG - 2024-04-29 13:21:55 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 14:g.44974124_44974159delinsCTCCTCAGCTGGTAGAGACTGAACTTCAGCAGGGGC;Error from VEP for: 14:g.44974124_44974159delinsCTCCTCAGCTGGTAGAGACTGAACTTCAGCAGGGGC | |
| [2024-04-29 13:21:56,851] {utils.py:315} DEBUG - 2024-04-29 13:21:55 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 14:g.44975072_44975122delinsTTCAGCTGGTGGAGGCAGAATTTCAGCAGGAGGCTCTTCTGAAGGGGACTC;Error from VEP for: 14:g.44975072_44975122delinsTTCAGCTGGTGGAGGCAGAATTTCAGCAGGAGGCTCTTCTGAAGGGGACTC | |
| [2024-04-29 13:21:56,851] {utils.py:315} DEBUG - 2024-04-29 13:21:55 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 14:g.44975519T>T;Error from VEP for: 14:g.44975519T>T | |
| [2024-04-29 13:21:56,851] {utils.py:315} DEBUG - 2024-04-29 13:21:55 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 14:g.44975587_44975588delinsTT;Error from VEP for: 14:g.44975587_44975588delinsTT | |
| [2024-04-29 13:21:56,851] {utils.py:315} DEBUG - 2024-04-29 13:21:55 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 14:g.45618077_45618082delinsAGATAG;Error from VEP for: 14:g.45618077_45618082delinsAGATAG | |
| [2024-04-29 13:21:56,851] {utils.py:315} DEBUG - 2024-04-29 13:21:55 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 14:g.45642288_45642289delinsCT;Error from VEP for: 14:g.45642288_45642289delinsCT | |
| [2024-04-29 13:21:56,851] {utils.py:315} DEBUG - 2024-04-29 13:21:56 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 14:g.45645955A>A;Error from VEP for: 14:g.45645955A>A | |
| [2024-04-29 13:21:57,478] {utils.py:315} DEBUG - 2024-04-29 13:21:56 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 14:g.45646019A>A;Error from VEP for: 14:g.45646019A>A | |
| [2024-04-29 13:21:57,478] {utils.py:315} DEBUG - 2024-04-29 13:21:56 [main] INFO org.cbioportal.annotator.internal.GenomeNexusImpl - On record 17500 out of 116708, annotation 14% complete | |
| [2024-04-29 13:21:57,478] {utils.py:315} DEBUG - 2024-04-29 13:21:56 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 14:g.45658040T>T;Error from VEP for: 14:g.45658040T>T | |
| [2024-04-29 13:21:57,478] {utils.py:315} DEBUG - 2024-04-29 13:21:56 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 14:g.45658083_45658085delinsGAA;Error from VEP for: 14:g.45658083_45658085delinsGAA | |
| [2024-04-29 13:21:57,478] {utils.py:315} DEBUG - 2024-04-29 13:21:56 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 14:g.45668096_45668097delinsAT;Error from VEP for: 14:g.45668096_45668097delinsAT | |
| [2024-04-29 13:21:57,478] {utils.py:315} DEBUG - 2024-04-29 13:21:56 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 14:g.50910676T>T;Error from VEP for: 14:g.50910676T>T | |
| [2024-04-29 13:21:57,478] {utils.py:315} DEBUG - 2024-04-29 13:21:56 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 14:g.50930796T>T;Error from VEP for: 14:g.50930796T>T | |
| [2024-04-29 13:21:57,478] {utils.py:315} DEBUG - 2024-04-29 13:21:56 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 14:g.51190283_51190285delinsCTC;Error from VEP for: 14:g.51190283_51190285delinsCTC | |
| [2024-04-29 13:21:57,478] {utils.py:315} DEBUG - 2024-04-29 13:21:56 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 14:g.51194228_51194231delinsATAA;Error from VEP for: 14:g.51194228_51194231delinsATAA | |
| [2024-04-29 13:21:57,478] {utils.py:315} DEBUG - 2024-04-29 13:21:56 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 14:g.51194310_51194314delinsTATCT;Error from VEP for: 14:g.51194310_51194314delinsTATCT | |
| [2024-04-29 13:21:57,478] {utils.py:315} DEBUG - 2024-04-29 13:21:56 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 14:g.51194328_51194336delinsTGTGTGTGG;Error from VEP for: 14:g.51194328_51194336delinsTGTGTGTGG | |
| [2024-04-29 13:21:57,478] {utils.py:315} DEBUG - 2024-04-29 13:21:56 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 14:g.51226613_51226614delinsCT;Error from VEP for: 14:g.51226613_51226614delinsCT | |
| [2024-04-29 13:21:57,478] {utils.py:315} DEBUG - 2024-04-29 13:21:56 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 14:g.51237214_51237215delinsCT;Error from VEP for: 14:g.51237214_51237215delinsCT | |
| [2024-04-29 13:21:57,478] {utils.py:315} DEBUG - 2024-04-29 13:21:56 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 14:g.51237236T>T;Error from VEP for: 14:g.51237236T>T | |
| [2024-04-29 13:21:57,478] {utils.py:315} DEBUG - 2024-04-29 13:21:56 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 14:g.51290059A>A;Error from VEP for: 14:g.51290059A>A | |
| [2024-04-29 13:21:57,479] {utils.py:315} DEBUG - 2024-04-29 13:21:56 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 14:g.54416600C>C;Error from VEP for: 14:g.54416600C>C | |
| [2024-04-29 13:21:57,479] {utils.py:315} DEBUG - 2024-04-29 13:21:56 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 14:g.54416601_54416602delinsCT;Error from VEP for: 14:g.54416601_54416602delinsCT | |
| [2024-04-29 13:21:57,479] {utils.py:315} DEBUG - 2024-04-29 13:21:56 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 14:g.54416602T>T;Error from VEP for: 14:g.54416602T>T | |
| [2024-04-29 13:21:57,479] {utils.py:315} DEBUG - 2024-04-29 13:21:56 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 14:g.54416602_54416603delinsTT;Error from VEP for: 14:g.54416602_54416603delinsTT | |
| [2024-04-29 13:21:57,479] {utils.py:315} DEBUG - 2024-04-29 13:21:56 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 14:g.54416602_54416604delinsTTT;Error from VEP for: 14:g.54416602_54416604delinsTTT | |
| [2024-04-29 13:21:57,479] {utils.py:315} DEBUG - 2024-04-29 13:21:56 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 14:g.54416602_54416606delinsTTTTT;Error from VEP for: 14:g.54416602_54416606delinsTTTTT | |
| [2024-04-29 13:21:57,479] {utils.py:315} DEBUG - 2024-04-29 13:21:56 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 14:g.54416602_54416607delinsTTTTTT;Error from VEP for: 14:g.54416602_54416607delinsTTTTTT | |
| [2024-04-29 13:21:57,479] {utils.py:315} DEBUG - 2024-04-29 13:21:56 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 14:g.54416870G>G;Error from VEP for: 14:g.54416870G>G | |
| [2024-04-29 13:21:57,479] {utils.py:315} DEBUG - 2024-04-29 13:21:56 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 14:g.55408116_55408117delinsAT;Error from VEP for: 14:g.55408116_55408117delinsAT | |
| [2024-04-29 13:21:57,479] {utils.py:315} DEBUG - 2024-04-29 13:21:56 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 14:g.55408168A>A;Error from VEP for: 14:g.55408168A>A | |
| [2024-04-29 13:21:57,479] {utils.py:315} DEBUG - 2024-04-29 13:21:56 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 14:g.55429694_55429696delinsTCT;Error from VEP for: 14:g.55429694_55429696delinsTCT | |
| [2024-04-29 13:21:57,479] {utils.py:315} DEBUG - 2024-04-29 13:21:56 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 14:g.56079187A>A;Error from VEP for: 14:g.56079187A>A | |
| [2024-04-29 13:21:57,479] {utils.py:315} DEBUG - 2024-04-29 13:21:56 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 14:g.56079224C>C;Error from VEP for: 14:g.56079224C>C | |
| [2024-04-29 13:21:57,479] {utils.py:315} DEBUG - 2024-04-29 13:21:56 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 14:g.56083367A>A;Error from VEP for: 14:g.56083367A>A | |
| [2024-04-29 13:21:57,479] {utils.py:315} DEBUG - 2024-04-29 13:21:56 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 14:g.56084768_56084770delinsGAG;Error from VEP for: 14:g.56084768_56084770delinsGAG | |
| [2024-04-29 13:21:57,479] {utils.py:315} DEBUG - 2024-04-29 13:21:56 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 14:g.56137475A>A;Error from VEP for: 14:g.56137475A>A | |
| [2024-04-29 13:21:57,479] {utils.py:315} DEBUG - 2024-04-29 13:21:56 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 14:g.56150851A>A;Error from VEP for: 14:g.56150851A>A | |
| [2024-04-29 13:21:57,479] {utils.py:315} DEBUG - 2024-04-29 13:21:56 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 14:g.56150981A>A;Error from VEP for: 14:g.56150981A>A | |
| [2024-04-29 13:21:57,479] {utils.py:315} DEBUG - 2024-04-29 13:21:57 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 14:g.61180412C>C;Error from VEP for: 14:g.61180412C>C | |
| [2024-04-29 13:21:58,305] {utils.py:315} DEBUG - 2024-04-29 13:21:57 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 14:g.62014535T>T;Error from VEP for: 14:g.62014535T>T | |
| [2024-04-29 13:21:58,305] {utils.py:315} DEBUG - 2024-04-29 13:21:57 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 14:g.62207796T>T;Error from VEP for: 14:g.62207796T>T | |
| [2024-04-29 13:21:58,305] {utils.py:315} DEBUG - 2024-04-29 13:21:57 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 14:g.62213865T>T;Error from VEP for: 14:g.62213865T>T | |
| [2024-04-29 13:21:58,305] {utils.py:315} DEBUG - 2024-04-29 13:21:58 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 14:g.64694160T>T;Error from VEP for: 14:g.64694160T>T | |
| [2024-04-29 13:21:59,241] {utils.py:315} DEBUG - 2024-04-29 13:21:58 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 14:g.64735622_64735624delinsATT;Error from VEP for: 14:g.64735622_64735624delinsATT | |
| [2024-04-29 13:21:59,241] {utils.py:315} DEBUG - 2024-04-29 13:21:58 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 14:g.65417741C>C;Error from VEP for: 14:g.65417741C>C | |
| [2024-04-29 13:21:59,241] {utils.py:315} DEBUG - 2024-04-29 13:21:58 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 14:g.65543066A>A;Error from VEP for: 14:g.65543066A>A | |
| [2024-04-29 13:21:59,241] {utils.py:315} DEBUG - 2024-04-29 13:21:58 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 14:g.65544054_65544069delinsTTACTTGCATTTCCTT;Error from VEP for: 14:g.65544054_65544069delinsTTACTTGCATTTCCTT | |
| [2024-04-29 13:21:59,241] {utils.py:315} DEBUG - 2024-04-29 13:21:58 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 14:g.65551008G>G;Error from VEP for: 14:g.65551008G>G | |
| [2024-04-29 13:21:59,241] {utils.py:315} DEBUG - 2024-04-29 13:21:58 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 14:g.67525631T>T;Error from VEP for: 14:g.67525631T>T | |
| [2024-04-29 13:21:59,241] {utils.py:315} DEBUG - 2024-04-29 13:21:58 [main] INFO org.cbioportal.annotator.internal.GenomeNexusImpl - On record 18000 out of 116708, annotation 15% complete | |
| [2024-04-29 13:21:59,241] {utils.py:315} DEBUG - 2024-04-29 13:21:58 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 14:g.67831574G>G;Error from VEP for: 14:g.67831574G>G | |
| [2024-04-29 13:21:59,241] {utils.py:315} DEBUG - 2024-04-29 13:21:58 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 14:g.68353933T>T;Error from VEP for: 14:g.68353933T>T | |
| [2024-04-29 13:21:59,241] {utils.py:315} DEBUG - 2024-04-29 13:21:58 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 14:g.71209189_71209198delinsCCGTTCCAGG;Error from VEP for: 14:g.71209189_71209198delinsCCGTTCCAGG | |
| [2024-04-29 13:21:59,241] {utils.py:315} DEBUG - 2024-04-29 13:21:58 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 14:g.73637619_73637621delinsGAA;Error from VEP for: 14:g.73637619_73637621delinsGAA | |
| [2024-04-29 13:21:59,241] {utils.py:315} DEBUG - 2024-04-29 13:21:58 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 14:g.73664814T>T;Error from VEP for: 14:g.73664814T>T | |
| [2024-04-29 13:21:59,241] {utils.py:315} DEBUG - 2024-04-29 13:21:58 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 14:g.75373240_75373243delinsTGAC;Error from VEP for: 14:g.75373240_75373243delinsTGAC | |
| [2024-04-29 13:21:59,241] {utils.py:315} DEBUG - 2024-04-29 13:21:59 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 14:g.75570552_75570575delinsTTGATAATTCCCGACATGCACTGA;Error from VEP for: 14:g.75570552_75570575delinsTTGATAATTCCCGACATGCACTGA | |
| [2024-04-29 13:21:59,952] {utils.py:315} DEBUG - 2024-04-29 13:21:59 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 14:g.75573065A>A;Error from VEP for: 14:g.75573065A>A | |
| [2024-04-29 13:21:59,952] {utils.py:315} DEBUG - 2024-04-29 13:21:59 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 14:g.75573065_75573067delinsAAA;Error from VEP for: 14:g.75573065_75573067delinsAAA | |
| [2024-04-29 13:21:59,952] {utils.py:315} DEBUG - 2024-04-29 13:21:59 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 14:g.75573065_75573070delinsAAAAAA;Error from VEP for: 14:g.75573065_75573070delinsAAAAAA | |
| [2024-04-29 13:21:59,952] {utils.py:315} DEBUG - 2024-04-29 13:21:59 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 14:g.75573065_75573072delinsAAAAAAAA;Error from VEP for: 14:g.75573065_75573072delinsAAAAAAAA | |
| [2024-04-29 13:21:59,952] {utils.py:315} DEBUG - 2024-04-29 13:21:59 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 14:g.75573065_75573074delinsAAAAAAAAAA;Error from VEP for: 14:g.75573065_75573074delinsAAAAAAAAAA | |
| [2024-04-29 13:21:59,952] {utils.py:315} DEBUG - 2024-04-29 13:21:59 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 14:g.75573065_75573075delinsAAAAAAAAAAA;Error from VEP for: 14:g.75573065_75573075delinsAAAAAAAAAAA | |
| [2024-04-29 13:21:59,952] {utils.py:315} DEBUG - 2024-04-29 13:21:59 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 14:g.75573065_75573077delinsAAAAAAAAAAAAA;Error from VEP for: 14:g.75573065_75573077delinsAAAAAAAAAAAAA | |
| [2024-04-29 13:21:59,952] {utils.py:315} DEBUG - 2024-04-29 13:21:59 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 14:g.75573089G>G;Error from VEP for: 14:g.75573089G>G | |
| [2024-04-29 13:21:59,952] {utils.py:315} DEBUG - 2024-04-29 13:21:59 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 14:g.76427407_76427409delinsCTC;Error from VEP for: 14:g.76427407_76427409delinsCTC | |
| [2024-04-29 13:21:59,952] {utils.py:315} DEBUG - 2024-04-29 13:21:59 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 14:g.78390632_78390637delinsAAACTC;Error from VEP for: 14:g.78390632_78390637delinsAAACTC | |
| [2024-04-29 13:21:59,952] {utils.py:315} DEBUG - 2024-04-29 13:21:59 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 14:g.91360888_91360890delinsCTC;Error from VEP for: 14:g.91360888_91360890delinsCTC | |
| [2024-04-29 13:22:02,534] {utils.py:315} DEBUG - 2024-04-29 13:21:59 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 14:g.92349371_92349372delinsCA;Error from VEP for: 14:g.92349371_92349372delinsCA | |
| [2024-04-29 13:22:02,534] {utils.py:315} DEBUG - 2024-04-29 13:21:59 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 14:g.92413745C>C;Error from VEP for: 14:g.92413745C>C | |
| [2024-04-29 13:22:02,534] {utils.py:315} DEBUG - 2024-04-29 13:21:59 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 14:g.92439199A>A;Error from VEP for: 14:g.92439199A>A | |
| [2024-04-29 13:22:02,534] {utils.py:315} DEBUG - 2024-04-29 13:21:59 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 14:g.92454634T>T;Error from VEP for: 14:g.92454634T>T | |
| [2024-04-29 13:22:02,534] {utils.py:315} DEBUG - 2024-04-29 13:21:59 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 14:g.92470377G>G;Error from VEP for: 14:g.92470377G>G | |
| [2024-04-29 13:22:02,534] {utils.py:315} DEBUG - 2024-04-29 13:21:59 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 14:g.92472698T>T;Error from VEP for: 14:g.92472698T>T | |
| [2024-04-29 13:22:02,534] {utils.py:315} DEBUG - 2024-04-29 13:21:59 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 14:g.93943937G>G;Error from VEP for: 14:g.93943937G>G | |
| [2024-04-29 13:22:02,534] {utils.py:315} DEBUG - 2024-04-29 13:21:59 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 14:g.94039081G>G;Error from VEP for: 14:g.94039081G>G | |
| [2024-04-29 13:22:02,534] {utils.py:315} DEBUG - 2024-04-29 13:21:59 [main] INFO org.cbioportal.annotator.internal.GenomeNexusImpl - On record 18500 out of 116708, annotation 15% complete | |
| [2024-04-29 13:22:02,534] {utils.py:315} DEBUG - 2024-04-29 13:21:59 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 14:g.94046589G>G;Error from VEP for: 14:g.94046589G>G | |
| [2024-04-29 13:22:02,534] {utils.py:315} DEBUG - 2024-04-29 13:21:59 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 14:g.94063826C>C;Error from VEP for: 14:g.94063826C>C | |
| [2024-04-29 13:22:02,534] {utils.py:315} DEBUG - 2024-04-29 13:21:59 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 14:g.94088050A>A;Error from VEP for: 14:g.94088050A>A | |
| [2024-04-29 13:22:02,534] {utils.py:315} DEBUG - 2024-04-29 13:21:59 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 14:g.94121610G>G;Error from VEP for: 14:g.94121610G>G | |
| [2024-04-29 13:22:02,534] {utils.py:315} DEBUG - 2024-04-29 13:21:59 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 14:g.94121740T>T;Error from VEP for: 14:g.94121740T>T | |
| [2024-04-29 13:22:02,534] {utils.py:315} DEBUG - 2024-04-29 13:22:02 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 14:g.94962859G>G;Error from VEP for: 14:g.94962859G>G | |
| [2024-04-29 13:22:03,436] {utils.py:315} DEBUG - 2024-04-29 13:22:02 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 14:g.95562651_95562652delinsCA;Error from VEP for: 14:g.95562651_95562652delinsCA | |
| [2024-04-29 13:22:03,436] {utils.py:315} DEBUG - 2024-04-29 13:22:02 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 14:g.95562995_95562997delinsTCC;Error from VEP for: 14:g.95562995_95562997delinsTCC | |
| [2024-04-29 13:22:03,436] {utils.py:315} DEBUG - 2024-04-29 13:22:02 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 14:g.95590947_95590963delinsACTTTATCTGCACACCA;Error from VEP for: 14:g.95590947_95590963delinsACTTTATCTGCACACCA | |
| [2024-04-29 13:22:03,436] {utils.py:315} DEBUG - 2024-04-29 13:22:02 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 14:g.96134904_96134915delinsGAAATGTTTGCT;Error from VEP for: 14:g.96134904_96134915delinsGAAATGTTTGCT | |
| [2024-04-29 13:22:03,436] {utils.py:315} DEBUG - 2024-04-29 13:22:02 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 14:g.99641544_99641546delinsCTC;Error from VEP for: 14:g.99641544_99641546delinsCTC | |
| [2024-04-29 13:22:03,436] {utils.py:315} DEBUG - 2024-04-29 13:22:02 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 14:g.99697775G>G;Error from VEP for: 14:g.99697775G>G | |
| [2024-04-29 13:22:03,436] {utils.py:315} DEBUG - 2024-04-29 13:22:02 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 14:g.102549430T>T;Error from VEP for: 14:g.102549430T>T | |
| [2024-04-29 13:22:03,436] {utils.py:315} DEBUG - 2024-04-29 13:22:02 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 14:g.102551075_102551077delinsCTC;Error from VEP for: 14:g.102551075_102551077delinsCTC | |
| [2024-04-29 13:22:03,436] {utils.py:315} DEBUG - 2024-04-29 13:22:02 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 14:g.102551161_102551163delinsTCT;Error from VEP for: 14:g.102551161_102551163delinsTCT | |
| [2024-04-29 13:22:03,436] {utils.py:315} DEBUG - 2024-04-29 13:22:02 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 14:g.102551195_102551197delinsTTC;Error from VEP for: 14:g.102551195_102551197delinsTTC | |
| [2024-04-29 13:22:03,436] {utils.py:315} DEBUG - 2024-04-29 13:22:02 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 14:g.102551255_102551260delinsTTCTTT;Error from VEP for: 14:g.102551255_102551260delinsTTCTTT | |
| [2024-04-29 13:22:03,436] {utils.py:315} DEBUG - 2024-04-29 13:22:02 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 14:g.102551276_102551278delinsTTT;Error from VEP for: 14:g.102551276_102551278delinsTTT | |
| [2024-04-29 13:22:03,436] {utils.py:315} DEBUG - 2024-04-29 13:22:02 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 14:g.102695568_102695577delinsGGCCTGGCCC;Error from VEP for: 14:g.102695568_102695577delinsGGCCTGGCCC | |
| [2024-04-29 13:22:03,436] {utils.py:315} DEBUG - 2024-04-29 13:22:02 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 14:g.102695876_102695877delinsGT;Error from VEP for: 14:g.102695876_102695877delinsGT | |
| [2024-04-29 13:22:03,436] {utils.py:315} DEBUG - 2024-04-29 13:22:02 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 14:g.102717957A>A;Error from VEP for: 14:g.102717957A>A | |
| [2024-04-29 13:22:03,436] {utils.py:315} DEBUG - 2024-04-29 13:22:02 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 14:g.102718301A>A;Error from VEP for: 14:g.102718301A>A | |
| [2024-04-29 13:22:03,436] {utils.py:315} DEBUG - 2024-04-29 13:22:02 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 14:g.102718303T>T;Error from VEP for: 14:g.102718303T>T | |
| [2024-04-29 13:22:03,436] {utils.py:315} DEBUG - 2024-04-29 13:22:02 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 14:g.103447224A>A;Error from VEP for: 14:g.103447224A>A | |
| [2024-04-29 13:22:03,437] {utils.py:315} DEBUG - 2024-04-29 13:22:02 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 14:g.105614481G>G;Error from VEP for: 14:g.105614481G>G | |
| [2024-04-29 13:22:03,437] {utils.py:315} DEBUG - 2024-04-29 13:22:02 [main] INFO org.cbioportal.annotator.internal.GenomeNexusImpl - On record 19000 out of 116708, annotation 16% complete | |
| [2024-04-29 13:22:03,437] {utils.py:315} DEBUG - 2024-04-29 13:22:03 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 15:g.22999510_22999511delinsCA;Error from VEP for: 15:g.22999510_22999511delinsCA | |
| [2024-04-29 13:22:04,922] {utils.py:315} DEBUG - 2024-04-29 13:22:03 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 15:g.23003106T>T;Error from VEP for: 15:g.23003106T>T | |
| [2024-04-29 13:22:04,922] {utils.py:315} DEBUG - 2024-04-29 13:22:03 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 15:g.23811096C>C;Error from VEP for: 15:g.23811096C>C | |
| [2024-04-29 13:22:04,922] {utils.py:315} DEBUG - 2024-04-29 13:22:03 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 15:g.23811405C>C;Error from VEP for: 15:g.23811405C>C | |
| [2024-04-29 13:22:04,922] {utils.py:315} DEBUG - 2024-04-29 13:22:03 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 15:g.23811565C>C;Error from VEP for: 15:g.23811565C>C | |
| [2024-04-29 13:22:04,922] {utils.py:315} DEBUG - 2024-04-29 13:22:03 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 15:g.24921053C>C;Error from VEP for: 15:g.24921053C>C | |
| [2024-04-29 13:22:04,922] {utils.py:315} DEBUG - 2024-04-29 13:22:03 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 15:g.24921152T>T;Error from VEP for: 15:g.24921152T>T | |
| [2024-04-29 13:22:04,922] {utils.py:315} DEBUG - 2024-04-29 13:22:03 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 15:g.24921326C>C;Error from VEP for: 15:g.24921326C>C | |
| [2024-04-29 13:22:04,922] {utils.py:315} DEBUG - 2024-04-29 13:22:03 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 15:g.25969139_25969149delinsCTTGATACCGC;Error from VEP for: 15:g.25969139_25969149delinsCTTGATACCGC | |
| [2024-04-29 13:22:04,922] {utils.py:315} DEBUG - 2024-04-29 13:22:03 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 15:g.25971191G>G;Error from VEP for: 15:g.25971191G>G | |
| [2024-04-29 13:22:04,922] {utils.py:315} DEBUG - 2024-04-29 13:22:03 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 15:g.25972393T>T;Error from VEP for: 15:g.25972393T>T | |
| [2024-04-29 13:22:04,922] {utils.py:315} DEBUG - 2024-04-29 13:22:03 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 15:g.28525215T>T;Error from VEP for: 15:g.28525215T>T | |
| [2024-04-29 13:22:04,922] {utils.py:315} DEBUG - 2024-04-29 13:22:03 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 15:g.28525279A>A;Error from VEP for: 15:g.28525279A>A | |
| [2024-04-29 13:22:04,922] {utils.py:315} DEBUG - 2024-04-29 13:22:03 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 15:g.34649123A>A;Error from VEP for: 15:g.34649123A>A | |
| [2024-04-29 13:22:04,922] {utils.py:315} DEBUG - 2024-04-29 13:22:03 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 15:g.40270334A>A;Error from VEP for: 15:g.40270334A>A | |
| [2024-04-29 13:22:04,922] {utils.py:315} DEBUG - 2024-04-29 13:22:03 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 15:g.40282508T>T;Error from VEP for: 15:g.40282508T>T | |
| [2024-04-29 13:22:04,922] {utils.py:315} DEBUG - 2024-04-29 13:22:04 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 15:g.40284233A>A;Error from VEP for: 15:g.40284233A>A | |
| [2024-04-29 13:22:05,776] {utils.py:315} DEBUG - 2024-04-29 13:22:04 [main] INFO org.cbioportal.annotator.internal.GenomeNexusImpl - On record 19500 out of 116708, annotation 16% complete | |
| [2024-04-29 13:22:05,776] {utils.py:315} DEBUG - 2024-04-29 13:22:04 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 15:g.40284499T>T;Error from VEP for: 15:g.40284499T>T | |
| [2024-04-29 13:22:05,776] {utils.py:315} DEBUG - 2024-04-29 13:22:04 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 15:g.40326639A>A;Error from VEP for: 15:g.40326639A>A | |
| [2024-04-29 13:22:05,776] {utils.py:315} DEBUG - 2024-04-29 13:22:04 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 15:g.40383889A>A;Error from VEP for: 15:g.40383889A>A | |
| [2024-04-29 13:22:05,776] {utils.py:315} DEBUG - 2024-04-29 13:22:04 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 15:g.40396471_40396472delinsGG;Error from VEP for: 15:g.40396471_40396472delinsGG | |
| [2024-04-29 13:22:05,776] {utils.py:315} DEBUG - 2024-04-29 13:22:04 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 15:g.40477506C>C;Error from VEP for: 15:g.40477506C>C | |
| [2024-04-29 13:22:05,776] {utils.py:315} DEBUG - 2024-04-29 13:22:04 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 15:g.40558224A>A;Error from VEP for: 15:g.40558224A>A | |
| [2024-04-29 13:22:05,776] {utils.py:315} DEBUG - 2024-04-29 13:22:04 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 15:g.40564460C>C;Error from VEP for: 15:g.40564460C>C | |
| [2024-04-29 13:22:05,776] {utils.py:315} DEBUG - 2024-04-29 13:22:04 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 15:g.40565825C>C;Error from VEP for: 15:g.40565825C>C | |
| [2024-04-29 13:22:05,776] {utils.py:315} DEBUG - 2024-04-29 13:22:04 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 15:g.40589039_40589041delinsTTC;Error from VEP for: 15:g.40589039_40589041delinsTTC | |
| [2024-04-29 13:22:05,776] {utils.py:315} DEBUG - 2024-04-29 13:22:04 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 15:g.40914353A>A;Error from VEP for: 15:g.40914353A>A | |
| [2024-04-29 13:22:05,776] {utils.py:315} DEBUG - 2024-04-29 13:22:04 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 15:g.40916822A>A;Error from VEP for: 15:g.40916822A>A | |
| [2024-04-29 13:22:05,776] {utils.py:315} DEBUG - 2024-04-29 13:22:04 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 15:g.40917838G>G;Error from VEP for: 15:g.40917838G>G | |
| [2024-04-29 13:22:05,776] {utils.py:315} DEBUG - 2024-04-29 13:22:04 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 15:g.40954526T>T;Error from VEP for: 15:g.40954526T>T | |
| [2024-04-29 13:22:05,776] {utils.py:315} DEBUG - 2024-04-29 13:22:04 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 15:g.41224557C>C;Error from VEP for: 15:g.41224557C>C | |
| [2024-04-29 13:22:05,776] {utils.py:315} DEBUG - 2024-04-29 13:22:04 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 15:g.41804422T>T;Error from VEP for: 15:g.41804422T>T | |
| [2024-04-29 13:22:05,776] {utils.py:315} DEBUG - 2024-04-29 13:22:04 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 15:g.41805883C>C;Error from VEP for: 15:g.41805883C>C | |
| [2024-04-29 13:22:05,776] {utils.py:315} DEBUG - 2024-04-29 13:22:04 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 15:g.41961346G>G;Error from VEP for: 15:g.41961346G>G | |
| [2024-04-29 13:22:05,776] {utils.py:315} DEBUG - 2024-04-29 13:22:04 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 15:g.41991322G>G;Error from VEP for: 15:g.41991322G>G | |
| [2024-04-29 13:22:05,776] {utils.py:315} DEBUG - 2024-04-29 13:22:04 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 15:g.41999999G>G;Error from VEP for: 15:g.41999999G>G | |
| [2024-04-29 13:22:05,776] {utils.py:315} DEBUG - 2024-04-29 13:22:04 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 15:g.42021442A>A;Error from VEP for: 15:g.42021442A>A | |
| [2024-04-29 13:22:05,776] {utils.py:315} DEBUG - 2024-04-29 13:22:04 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 15:g.42026746A>A;Error from VEP for: 15:g.42026746A>A | |
| [2024-04-29 13:22:05,776] {utils.py:315} DEBUG - 2024-04-29 13:22:04 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 15:g.42042077A>A;Error from VEP for: 15:g.42042077A>A | |
| [2024-04-29 13:22:05,776] {utils.py:315} DEBUG - 2024-04-29 13:22:04 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 15:g.42042673G>G;Error from VEP for: 15:g.42042673G>G | |
| [2024-04-29 13:22:05,776] {utils.py:315} DEBUG - 2024-04-29 13:22:04 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 15:g.42052625_42052627delinsGCG;Error from VEP for: 15:g.42052625_42052627delinsGCG | |
| [2024-04-29 13:22:05,776] {utils.py:315} DEBUG - 2024-04-29 13:22:04 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 15:g.42054008A>A;Error from VEP for: 15:g.42054008A>A | |
| [2024-04-29 13:22:05,776] {utils.py:315} DEBUG - 2024-04-29 13:22:04 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 15:g.42058964A>A;Error from VEP for: 15:g.42058964A>A | |
| [2024-04-29 13:22:05,776] {utils.py:315} DEBUG - 2024-04-29 13:22:04 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 15:g.42059170C>C;Error from VEP for: 15:g.42059170C>C | |
| [2024-04-29 13:22:05,776] {utils.py:315} DEBUG - 2024-04-29 13:22:04 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 15:g.42059448G>G;Error from VEP for: 15:g.42059448G>G | |
| [2024-04-29 13:22:05,776] {utils.py:315} DEBUG - 2024-04-29 13:22:05 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 15:g.42111743_42111753delinsGGCGGGGGGGG;Error from VEP for: 15:g.42111743_42111753delinsGGCGGGGGGGG | |
| [2024-04-29 13:22:06,952] {utils.py:315} DEBUG - 2024-04-29 13:22:05 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 15:g.42111746G>G;Error from VEP for: 15:g.42111746G>G | |
| [2024-04-29 13:22:06,952] {utils.py:315} DEBUG - 2024-04-29 13:22:05 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 15:g.42111746_42111747delinsGG;Error from VEP for: 15:g.42111746_42111747delinsGG | |
| [2024-04-29 13:22:06,952] {utils.py:315} DEBUG - 2024-04-29 13:22:05 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 15:g.43044817T>T;Error from VEP for: 15:g.43044817T>T | |
| [2024-04-29 13:22:06,952] {utils.py:315} DEBUG - 2024-04-29 13:22:05 [main] INFO org.cbioportal.annotator.internal.GenomeNexusImpl - On record 20000 out of 116708, annotation 17% complete | |
| [2024-04-29 13:22:06,952] {utils.py:315} DEBUG - 2024-04-29 13:22:05 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 15:g.43712845G>G;Error from VEP for: 15:g.43712845G>G | |
| [2024-04-29 13:22:06,952] {utils.py:315} DEBUG - 2024-04-29 13:22:05 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 15:g.43713332_43713333delinsCA;Error from VEP for: 15:g.43713332_43713333delinsCA | |
| [2024-04-29 13:22:06,952] {utils.py:315} DEBUG - 2024-04-29 13:22:05 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 15:g.43714257C>C;Error from VEP for: 15:g.43714257C>C | |
| [2024-04-29 13:22:06,952] {utils.py:315} DEBUG - 2024-04-29 13:22:05 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 15:g.43730536G>G;Error from VEP for: 15:g.43730536G>G | |
| [2024-04-29 13:22:06,952] {utils.py:315} DEBUG - 2024-04-29 13:22:05 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 15:g.43748661T>T;Error from VEP for: 15:g.43748661T>T | |
| [2024-04-29 13:22:06,952] {utils.py:315} DEBUG - 2024-04-29 13:22:05 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 15:g.43749408A>A;Error from VEP for: 15:g.43749408A>A | |
| [2024-04-29 13:22:06,952] {utils.py:315} DEBUG - 2024-04-29 13:22:05 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 15:g.43762078_43762083delinsGGGATA;Error from VEP for: 15:g.43762078_43762083delinsGGGATA | |
| [2024-04-29 13:22:06,952] {utils.py:315} DEBUG - 2024-04-29 13:22:05 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 15:g.48736803T>T;Error from VEP for: 15:g.48736803T>T | |
| [2024-04-29 13:22:06,952] {utils.py:315} DEBUG - 2024-04-29 13:22:05 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 15:g.48784719C>C;Error from VEP for: 15:g.48784719C>C | |
| [2024-04-29 13:22:06,952] {utils.py:315} DEBUG - 2024-04-29 13:22:05 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 15:g.48796128_48796129delinsTG;Error from VEP for: 15:g.48796128_48796129delinsTG | |
| [2024-04-29 13:22:06,952] {utils.py:315} DEBUG - 2024-04-29 13:22:05 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 15:g.50875341_50875343delinsCTA;Error from VEP for: 15:g.50875341_50875343delinsCTA | |
| [2024-04-29 13:22:06,952] {utils.py:315} DEBUG - 2024-04-29 13:22:05 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 15:g.50920363_50920366delinsAAAC;Error from VEP for: 15:g.50920363_50920366delinsAAAC | |
| [2024-04-29 13:22:06,952] {utils.py:315} DEBUG - 2024-04-29 13:22:05 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 15:g.50925140T>T;Error from VEP for: 15:g.50925140T>T | |
| [2024-04-29 13:22:06,952] {utils.py:315} DEBUG - 2024-04-29 13:22:06 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 15:g.54305720G>G;Error from VEP for: 15:g.54305720G>G | |
| [2024-04-29 13:22:08,358] {utils.py:315} DEBUG - 2024-04-29 13:22:06 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 15:g.54305757A>A;Error from VEP for: 15:g.54305757A>A | |
| [2024-04-29 13:22:08,358] {utils.py:315} DEBUG - 2024-04-29 13:22:06 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 15:g.54527276A>A;Error from VEP for: 15:g.54527276A>A | |
| [2024-04-29 13:22:08,358] {utils.py:315} DEBUG - 2024-04-29 13:22:06 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 15:g.54556507_54556509delinsAAG;Error from VEP for: 15:g.54556507_54556509delinsAAG | |
| [2024-04-29 13:22:08,358] {utils.py:315} DEBUG - 2024-04-29 13:22:06 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 15:g.54626040T>T;Error from VEP for: 15:g.54626040T>T | |
| [2024-04-29 13:22:08,358] {utils.py:315} DEBUG - 2024-04-29 13:22:06 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 15:g.54792362A>A;Error from VEP for: 15:g.54792362A>A | |
| [2024-04-29 13:22:08,358] {utils.py:315} DEBUG - 2024-04-29 13:22:06 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 15:g.54916100_54916105delinsACAAAA;Error from VEP for: 15:g.54916100_54916105delinsACAAAA | |
| [2024-04-29 13:22:08,358] {utils.py:315} DEBUG - 2024-04-29 13:22:06 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 15:g.54919345_54919348delinsTTGT;Error from VEP for: 15:g.54919345_54919348delinsTTGT | |
| [2024-04-29 13:22:08,358] {utils.py:315} DEBUG - 2024-04-29 13:22:06 [main] INFO org.cbioportal.annotator.internal.GenomeNexusImpl - On record 20500 out of 116708, annotation 17% complete | |
| [2024-04-29 13:22:08,358] {utils.py:315} DEBUG - 2024-04-29 13:22:06 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 15:g.57545545_57545548delinsTGCC;Error from VEP for: 15:g.57545545_57545548delinsTGCC | |
| [2024-04-29 13:22:08,358] {utils.py:315} DEBUG - 2024-04-29 13:22:06 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 15:g.58913755_58913756delinsTA;Error from VEP for: 15:g.58913755_58913756delinsTA | |
| [2024-04-29 13:22:08,358] {utils.py:315} DEBUG - 2024-04-29 13:22:06 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 15:g.58920068_58920069delinsTG;Error from VEP for: 15:g.58920068_58920069delinsTG | |
| [2024-04-29 13:22:08,358] {utils.py:315} DEBUG - 2024-04-29 13:22:06 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 15:g.64275868G>G;Error from VEP for: 15:g.64275868G>G | |
| [2024-04-29 13:22:08,358] {utils.py:315} DEBUG - 2024-04-29 13:22:06 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 15:g.64497103T>T;Error from VEP for: 15:g.64497103T>T | |
| [2024-04-29 13:22:08,359] {utils.py:315} DEBUG - 2024-04-29 13:22:06 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 15:g.64497132_64497135delinsTCTT;Error from VEP for: 15:g.64497132_64497135delinsTCTT | |
| [2024-04-29 13:22:08,359] {utils.py:315} DEBUG - 2024-04-29 13:22:08 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 15:g.66782791T>T;Error from VEP for: 15:g.66782791T>T | |
| [2024-04-29 13:22:09,240] {utils.py:315} DEBUG - 2024-04-29 13:22:08 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 15:g.67951229A>A;Error from VEP for: 15:g.67951229A>A | |
| [2024-04-29 13:22:09,240] {utils.py:315} DEBUG - 2024-04-29 13:22:08 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 15:g.74290458G>G;Error from VEP for: 15:g.74290458G>G | |
| [2024-04-29 13:22:09,240] {utils.py:315} DEBUG - 2024-04-29 13:22:08 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 15:g.74315309_74315311delinsAGG;Error from VEP for: 15:g.74315309_74315311delinsAGG | |
| [2024-04-29 13:22:09,240] {utils.py:315} DEBUG - 2024-04-29 13:22:08 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 15:g.74315374_74315375delinsCG;Error from VEP for: 15:g.74315374_74315375delinsCG | |
| [2024-04-29 13:22:09,240] {utils.py:315} DEBUG - 2024-04-29 13:22:08 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 15:g.74326715C>C;Error from VEP for: 15:g.74326715C>C | |
| [2024-04-29 13:22:09,240] {utils.py:315} DEBUG - 2024-04-29 13:22:08 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 15:g.74327656C>C;Error from VEP for: 15:g.74327656C>C | |
| [2024-04-29 13:22:09,240] {utils.py:315} DEBUG - 2024-04-29 13:22:08 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 15:g.74336979C>C;Error from VEP for: 15:g.74336979C>C | |
| [2024-04-29 13:22:09,240] {utils.py:315} DEBUG - 2024-04-29 13:22:08 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 15:g.74337203C>C;Error from VEP for: 15:g.74337203C>C | |
| [2024-04-29 13:22:09,240] {utils.py:315} DEBUG - 2024-04-29 13:22:08 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 15:g.74912490G>G;Error from VEP for: 15:g.74912490G>G | |
| [2024-04-29 13:22:09,240] {utils.py:315} DEBUG - 2024-04-29 13:22:08 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 15:g.74914321G>G;Error from VEP for: 15:g.74914321G>G | |
| [2024-04-29 13:22:09,240] {utils.py:315} DEBUG - 2024-04-29 13:22:08 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 15:g.75092866G>G;Error from VEP for: 15:g.75092866G>G | |
| [2024-04-29 13:22:09,240] {utils.py:315} DEBUG - 2024-04-29 13:22:08 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 15:g.75131050C>C;Error from VEP for: 15:g.75131050C>C | |
| [2024-04-29 13:22:09,240] {utils.py:315} DEBUG - 2024-04-29 13:22:08 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 15:g.75131066_75131070delinsCCGGG;Error from VEP for: 15:g.75131066_75131070delinsCCGGG | |
| [2024-04-29 13:22:09,240] {utils.py:315} DEBUG - 2024-04-29 13:22:08 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 15:g.75981842_75981854delinsCCTCCAGCACCAG;Error from VEP for: 15:g.75981842_75981854delinsCCTCCAGCACCAG | |
| [2024-04-29 13:22:09,240] {utils.py:315} DEBUG - 2024-04-29 13:22:08 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 15:g.77471473_77471475delinsGAA;Error from VEP for: 15:g.77471473_77471475delinsGAA | |
| [2024-04-29 13:22:09,240] {utils.py:315} DEBUG - 2024-04-29 13:22:08 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 15:g.77471654G>G;Error from VEP for: 15:g.77471654G>G | |
| [2024-04-29 13:22:09,240] {utils.py:315} DEBUG - 2024-04-29 13:22:08 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 15:g.77472047_77472049delinsGGC;Error from VEP for: 15:g.77472047_77472049delinsGGC | |
| [2024-04-29 13:22:09,240] {utils.py:315} DEBUG - 2024-04-29 13:22:08 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 15:g.77473301T>T;Error from VEP for: 15:g.77473301T>T | |
| [2024-04-29 13:22:09,240] {utils.py:315} DEBUG - 2024-04-29 13:22:08 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 15:g.77474065T>T;Error from VEP for: 15:g.77474065T>T | |
| [2024-04-29 13:22:09,240] {utils.py:315} DEBUG - 2024-04-29 13:22:08 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 15:g.78834621A>A;Error from VEP for: 15:g.78834621A>A | |
| [2024-04-29 13:22:09,240] {utils.py:315} DEBUG - 2024-04-29 13:22:08 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 15:g.78841189A>A;Error from VEP for: 15:g.78841189A>A | |
| [2024-04-29 13:22:09,240] {utils.py:315} DEBUG - 2024-04-29 13:22:08 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 15:g.78873257_78873261delinsAAAAT;Error from VEP for: 15:g.78873257_78873261delinsAAAAT | |
| [2024-04-29 13:22:09,240] {utils.py:315} DEBUG - 2024-04-29 13:22:08 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 15:g.78882366T>T;Error from VEP for: 15:g.78882366T>T | |
| [2024-04-29 13:22:09,240] {utils.py:315} DEBUG - 2024-04-29 13:22:08 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 15:g.78882853T>T;Error from VEP for: 15:g.78882853T>T | |
| [2024-04-29 13:22:09,241] {utils.py:315} DEBUG - 2024-04-29 13:22:09 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 15:g.78888783T>T;Error from VEP for: 15:g.78888783T>T | |
| [2024-04-29 13:22:10,578] {utils.py:315} DEBUG - 2024-04-29 13:22:09 [main] INFO org.cbioportal.annotator.internal.GenomeNexusImpl - On record 21000 out of 116708, annotation 17% complete | |
| [2024-04-29 13:22:10,579] {utils.py:315} DEBUG - 2024-04-29 13:22:09 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 15:g.79310201C>C;Error from VEP for: 15:g.79310201C>C | |
| [2024-04-29 13:22:10,579] {utils.py:315} DEBUG - 2024-04-29 13:22:09 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 15:g.79382894C>C;Error from VEP for: 15:g.79382894C>C | |
| [2024-04-29 13:22:10,579] {utils.py:315} DEBUG - 2024-04-29 13:22:09 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 15:g.80259989G>G;Error from VEP for: 15:g.80259989G>G | |
| [2024-04-29 13:22:10,579] {utils.py:315} DEBUG - 2024-04-29 13:22:09 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 15:g.84561502_84561505delinsTGTG;Error from VEP for: 15:g.84561502_84561505delinsTGTG | |
| [2024-04-29 13:22:10,579] {utils.py:315} DEBUG - 2024-04-29 13:22:09 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 15:g.84651441_84651452delinsAGCGAAGCCAAT;Error from VEP for: 15:g.84651441_84651452delinsAGCGAAGCCAAT | |
| [2024-04-29 13:22:10,579] {utils.py:315} DEBUG - 2024-04-29 13:22:09 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 15:g.84657496_84657498delinsAAC;Error from VEP for: 15:g.84657496_84657498delinsAAC | |
| [2024-04-29 13:22:10,579] {utils.py:315} DEBUG - 2024-04-29 13:22:09 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 15:g.84706673_84706676delinsCAAA;Error from VEP for: 15:g.84706673_84706676delinsCAAA | |
| [2024-04-29 13:22:10,579] {utils.py:315} DEBUG - 2024-04-29 13:22:09 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 15:g.85400267A>A;Error from VEP for: 15:g.85400267A>A | |
| [2024-04-29 13:22:10,579] {utils.py:315} DEBUG - 2024-04-29 13:22:09 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 15:g.85411713C>C;Error from VEP for: 15:g.85411713C>C | |
| [2024-04-29 13:22:10,579] {utils.py:315} DEBUG - 2024-04-29 13:22:09 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 15:g.88420005T>T;Error from VEP for: 15:g.88420005T>T | |
| [2024-04-29 13:22:10,579] {utils.py:315} DEBUG - 2024-04-29 13:22:09 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 15:g.88472607C>C;Error from VEP for: 15:g.88472607C>C | |
| [2024-04-29 13:22:10,579] {utils.py:315} DEBUG - 2024-04-29 13:22:10 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 15:g.88679254G>G;Error from VEP for: 15:g.88679254G>G | |
| [2024-04-29 13:22:12,539] {utils.py:315} DEBUG - 2024-04-29 13:22:10 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 15:g.88799219G>G;Error from VEP for: 15:g.88799219G>G | |
| [2024-04-29 13:22:12,539] {utils.py:315} DEBUG - 2024-04-29 13:22:10 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 15:g.89817450_89817452delinsCTC;Error from VEP for: 15:g.89817450_89817452delinsCTC | |
| [2024-04-29 13:22:12,539] {utils.py:315} DEBUG - 2024-04-29 13:22:10 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 15:g.89850742A>A;Error from VEP for: 15:g.89850742A>A | |
| [2024-04-29 13:22:12,539] {utils.py:315} DEBUG - 2024-04-29 13:22:10 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 15:g.89859551T>T;Error from VEP for: 15:g.89859551T>T | |
| [2024-04-29 13:22:12,539] {utils.py:315} DEBUG - 2024-04-29 13:22:10 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 15:g.90627376A>A;Error from VEP for: 15:g.90627376A>A | |
| [2024-04-29 13:22:12,539] {utils.py:315} DEBUG - 2024-04-29 13:22:10 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 15:g.90631943C>C;Error from VEP for: 15:g.90631943C>C | |
| [2024-04-29 13:22:12,539] {utils.py:315} DEBUG - 2024-04-29 13:22:10 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 15:g.91293055_91293057delinsCAA;Error from VEP for: 15:g.91293055_91293057delinsCAA | |
| [2024-04-29 13:22:12,539] {utils.py:315} DEBUG - 2024-04-29 13:22:10 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 15:g.91303326T>T;Error from VEP for: 15:g.91303326T>T | |
| [2024-04-29 13:22:12,539] {utils.py:315} DEBUG - 2024-04-29 13:22:10 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 15:g.91303326_91303327delinsTT;Error from VEP for: 15:g.91303326_91303327delinsTT | |
| [2024-04-29 13:22:12,539] {utils.py:315} DEBUG - 2024-04-29 13:22:10 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 15:g.91303326_91303328delinsTTT;Error from VEP for: 15:g.91303326_91303328delinsTTT | |
| [2024-04-29 13:22:12,539] {utils.py:315} DEBUG - 2024-04-29 13:22:10 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 15:g.91304139A>A;Error from VEP for: 15:g.91304139A>A | |
| [2024-04-29 13:22:12,539] {utils.py:315} DEBUG - 2024-04-29 13:22:10 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 15:g.91337590A>A;Error from VEP for: 15:g.91337590A>A | |
| [2024-04-29 13:22:12,539] {utils.py:315} DEBUG - 2024-04-29 13:22:10 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 15:g.91347484A>A;Error from VEP for: 15:g.91347484A>A | |
| [2024-04-29 13:22:12,539] {utils.py:315} DEBUG - 2024-04-29 13:22:10 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 15:g.91423121T>T;Error from VEP for: 15:g.91423121T>T | |
| [2024-04-29 13:22:12,539] {utils.py:315} DEBUG - 2024-04-29 13:22:10 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 15:g.99192755_99192761delinsTTTTTTT;Error from VEP for: 15:g.99192755_99192761delinsTTTTTTT | |
| [2024-04-29 13:22:12,539] {utils.py:315} DEBUG - 2024-04-29 13:22:10 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 15:g.99192755_99192762delinsTTTTTTTT;Error from VEP for: 15:g.99192755_99192762delinsTTTTTTTT | |
| [2024-04-29 13:22:12,539] {utils.py:315} DEBUG - 2024-04-29 13:22:10 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 15:g.99192755_99192763delinsTTTTTTTTT;Error from VEP for: 15:g.99192755_99192763delinsTTTTTTTTT | |
| [2024-04-29 13:22:12,539] {utils.py:315} DEBUG - 2024-04-29 13:22:10 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 15:g.99192755_99192764delinsTTTTTTTTTT;Error from VEP for: 15:g.99192755_99192764delinsTTTTTTTTTT | |
| [2024-04-29 13:22:12,539] {utils.py:315} DEBUG - 2024-04-29 13:22:10 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 15:g.99192755_99192765delinsTTTTTTTTTTT;Error from VEP for: 15:g.99192755_99192765delinsTTTTTTTTTTT | |
| [2024-04-29 13:22:12,539] {utils.py:315} DEBUG - 2024-04-29 13:22:10 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 15:g.99192755_99192766delinsTTTTTTTTTTTT;Error from VEP for: 15:g.99192755_99192766delinsTTTTTTTTTTTT | |
| [2024-04-29 13:22:12,539] {utils.py:315} DEBUG - 2024-04-29 13:22:10 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 15:g.99192770_99192779delinsTTTTTTTTTG;Error from VEP for: 15:g.99192770_99192779delinsTTTTTTTTTG | |
| [2024-04-29 13:22:12,539] {utils.py:315} DEBUG - 2024-04-29 13:22:10 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 15:g.99192771_99192779delinsTTTTTTTTG;Error from VEP for: 15:g.99192771_99192779delinsTTTTTTTTG | |
| [2024-04-29 13:22:12,539] {utils.py:315} DEBUG - 2024-04-29 13:22:10 [main] INFO org.cbioportal.annotator.internal.GenomeNexusImpl - On record 21500 out of 116708, annotation 18% complete | |
| [2024-04-29 13:22:12,539] {utils.py:315} DEBUG - 2024-04-29 13:22:10 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 15:g.100185851T>T;Error from VEP for: 15:g.100185851T>T | |
| [2024-04-29 13:22:12,539] {utils.py:315} DEBUG - 2024-04-29 13:22:10 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 15:g.100252710_100252712delinsCAG;Error from VEP for: 15:g.100252710_100252712delinsCAG | |
| [2024-04-29 13:22:12,539] {utils.py:315} DEBUG - 2024-04-29 13:22:10 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 15:g.100252710_100252715delinsCAGCAG;Error from VEP for: 15:g.100252710_100252715delinsCAGCAG | |
| [2024-04-29 13:22:12,539] {utils.py:315} DEBUG - 2024-04-29 13:22:10 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 15:g.100252710_100252718delinsCAGCAGCAG;Error from VEP for: 15:g.100252710_100252718delinsCAGCAGCAG | |
| [2024-04-29 13:22:12,539] {utils.py:315} DEBUG - 2024-04-29 13:22:10 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 15:g.100252710_100252730delinsCAGCAGCAGCAGCAGCAGCAG;Error from VEP for: 15:g.100252710_100252730delinsCAGCAGCAGCAGCAGCAGCAG | |
| [2024-04-29 13:22:12,539] {utils.py:315} DEBUG - 2024-04-29 13:22:10 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 15:g.100252736_100252744delinsGCAGCAGCC;Error from VEP for: 15:g.100252736_100252744delinsGCAGCAGCC | |
| [2024-04-29 13:22:12,539] {utils.py:315} DEBUG - 2024-04-29 13:22:10 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 15:g.100252742_100252744delinsGCC;Error from VEP for: 15:g.100252742_100252744delinsGCC | |
| [2024-04-29 13:22:12,539] {utils.py:315} DEBUG - 2024-04-29 13:22:10 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 15:g.101550745A>A;Error from VEP for: 15:g.101550745A>A | |
| [2024-04-29 13:22:12,539] {utils.py:315} DEBUG - 2024-04-29 13:22:10 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 16:g.337965C>C;Error from VEP for: 16:g.337965C>C | |
| [2024-04-29 13:22:12,539] {utils.py:315} DEBUG - 2024-04-29 13:22:10 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 16:g.347093C>C;Error from VEP for: 16:g.347093C>C | |
| [2024-04-29 13:22:12,539] {utils.py:315} DEBUG - 2024-04-29 13:22:12 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 16:g.347093C>C;Error from VEP for: 16:g.347093C>C | |
| [2024-04-29 13:22:13,557] {utils.py:315} DEBUG - 2024-04-29 13:22:12 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 16:g.396234G>G;Error from VEP for: 16:g.396234G>G | |
| [2024-04-29 13:22:13,558] {utils.py:315} DEBUG - 2024-04-29 13:22:12 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 16:g.396916G>G;Error from VEP for: 16:g.396916G>G | |
| [2024-04-29 13:22:13,558] {utils.py:315} DEBUG - 2024-04-29 13:22:12 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 16:g.397008_397009delinsCT;Error from VEP for: 16:g.397008_397009delinsCT | |
| [2024-04-29 13:22:13,558] {utils.py:315} DEBUG - 2024-04-29 13:22:12 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 16:g.2121791_2121792delinsAG;Error from VEP for: 16:g.2121791_2121792delinsAG | |
| [2024-04-29 13:22:13,558] {utils.py:315} DEBUG - 2024-04-29 13:22:12 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 16:g.2134982_2134984delinsCTT;Error from VEP for: 16:g.2134982_2134984delinsCTT | |
| [2024-04-29 13:22:13,558] {utils.py:315} DEBUG - 2024-04-29 13:22:12 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 16:g.2138578_2138580delinsCTC;Error from VEP for: 16:g.2138578_2138580delinsCTC | |
| [2024-04-29 13:22:13,558] {utils.py:315} DEBUG - 2024-04-29 13:22:12 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 16:g.2138663_2138666delinsAAAT;Error from VEP for: 16:g.2138663_2138666delinsAAAT | |
| [2024-04-29 13:22:13,558] {utils.py:315} DEBUG - 2024-04-29 13:22:12 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 16:g.2138671_2138672delinsAA;Error from VEP for: 16:g.2138671_2138672delinsAA | |
| [2024-04-29 13:22:13,558] {utils.py:315} DEBUG - 2024-04-29 13:22:12 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 16:g.2327918A>A;Error from VEP for: 16:g.2327918A>A | |
| [2024-04-29 13:22:13,558] {utils.py:315} DEBUG - 2024-04-29 13:22:12 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 16:g.3024396_3024397delinsAG;Error from VEP for: 16:g.3024396_3024397delinsAG | |
| [2024-04-29 13:22:13,558] {utils.py:315} DEBUG - 2024-04-29 13:22:12 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 16:g.3071772C>C;Error from VEP for: 16:g.3071772C>C | |
| [2024-04-29 13:22:13,558] {utils.py:315} DEBUG - 2024-04-29 13:22:12 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 16:g.3777691A>A;Error from VEP for: 16:g.3777691A>A | |
| [2024-04-29 13:22:13,558] {utils.py:315} DEBUG - 2024-04-29 13:22:12 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 16:g.3778410_3778415delinsTGCTGT;Error from VEP for: 16:g.3778410_3778415delinsTGCTGT | |
| [2024-04-29 13:22:13,558] {utils.py:315} DEBUG - 2024-04-29 13:22:12 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 16:g.3778440_3778448delinsTGCTGCTGC;Error from VEP for: 16:g.3778440_3778448delinsTGCTGCTGC | |
| [2024-04-29 13:22:13,558] {utils.py:315} DEBUG - 2024-04-29 13:22:12 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 16:g.3779211G>G;Error from VEP for: 16:g.3779211G>G | |
| [2024-04-29 13:22:13,558] {utils.py:315} DEBUG - 2024-04-29 13:22:12 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 16:g.3779604C>C;Error from VEP for: 16:g.3779604C>C | |
| [2024-04-29 13:22:13,558] {utils.py:315} DEBUG - 2024-04-29 13:22:12 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 16:g.3779755G>G;Error from VEP for: 16:g.3779755G>G | |
| [2024-04-29 13:22:13,558] {utils.py:315} DEBUG - 2024-04-29 13:22:12 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 16:g.3781324_3781326delinsAGG;Error from VEP for: 16:g.3781324_3781326delinsAGG | |
| [2024-04-29 13:22:13,558] {utils.py:315} DEBUG - 2024-04-29 13:22:12 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 16:g.3781773_3781784delinsCTACCTCCTTGT;Error from VEP for: 16:g.3781773_3781784delinsCTACCTCCTTGT | |
| [2024-04-29 13:22:13,558] {utils.py:315} DEBUG - 2024-04-29 13:22:12 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 16:g.3786145A>A;Error from VEP for: 16:g.3786145A>A | |
| [2024-04-29 13:22:13,558] {utils.py:315} DEBUG - 2024-04-29 13:22:12 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 16:g.3794897_3794898delinsTT;Error from VEP for: 16:g.3794897_3794898delinsTT | |
| [2024-04-29 13:22:13,558] {utils.py:315} DEBUG - 2024-04-29 13:22:12 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 16:g.3817721T>T;Error from VEP for: 16:g.3817721T>T | |
| [2024-04-29 13:22:13,558] {utils.py:315} DEBUG - 2024-04-29 13:22:12 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 16:g.3832849A>A;Error from VEP for: 16:g.3832849A>A | |
| [2024-04-29 13:22:13,558] {utils.py:315} DEBUG - 2024-04-29 13:22:12 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 16:g.3929878T>T;Error from VEP for: 16:g.3929878T>T | |
| [2024-04-29 13:22:13,558] {utils.py:315} DEBUG - 2024-04-29 13:22:12 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 16:g.9856902_9856904delinsTCT;Error from VEP for: 16:g.9856902_9856904delinsTCT | |
| [2024-04-29 13:22:13,558] {utils.py:315} DEBUG - 2024-04-29 13:22:12 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 16:g.9857283T>T;Error from VEP for: 16:g.9857283T>T | |
| [2024-04-29 13:22:13,558] {utils.py:315} DEBUG - 2024-04-29 13:22:12 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 16:g.9857380T>T;Error from VEP for: 16:g.9857380T>T | |
| [2024-04-29 13:22:13,558] {utils.py:315} DEBUG - 2024-04-29 13:22:12 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 16:g.9862822G>G;Error from VEP for: 16:g.9862822G>G | |
| [2024-04-29 13:22:13,558] {utils.py:315} DEBUG - 2024-04-29 13:22:12 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 16:g.10971058_10971069delinsTAGTGATGAGGC;Error from VEP for: 16:g.10971058_10971069delinsTAGTGATGAGGC | |
| [2024-04-29 13:22:13,558] {utils.py:315} DEBUG - 2024-04-29 13:22:12 [main] INFO org.cbioportal.annotator.internal.GenomeNexusImpl - On record 22000 out of 116708, annotation 18% complete | |
| [2024-04-29 13:22:13,558] {utils.py:315} DEBUG - 2024-04-29 13:22:12 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 16:g.10995956_10995964delinsCCTGCCCTG;Error from VEP for: 16:g.10995956_10995964delinsCCTGCCCTG | |
| [2024-04-29 13:22:13,558] {utils.py:315} DEBUG - 2024-04-29 13:22:13 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 16:g.14026225T>T;Error from VEP for: 16:g.14026225T>T | |
| [2024-04-29 13:22:14,904] {utils.py:315} DEBUG - 2024-04-29 13:22:13 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 16:g.14042196A>A;Error from VEP for: 16:g.14042196A>A | |
| [2024-04-29 13:22:14,904] {utils.py:315} DEBUG - 2024-04-29 13:22:13 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 16:g.15797783T>T;Error from VEP for: 16:g.15797783T>T | |
| [2024-04-29 13:22:14,904] {utils.py:315} DEBUG - 2024-04-29 13:22:13 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 16:g.15797783_15797787delinsTTTTT;Error from VEP for: 16:g.15797783_15797787delinsTTTTT | |
| [2024-04-29 13:22:14,904] {utils.py:315} DEBUG - 2024-04-29 13:22:13 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 16:g.15797788_15797791delinsTTTG;Error from VEP for: 16:g.15797788_15797791delinsTTTG | |
| [2024-04-29 13:22:14,904] {utils.py:315} DEBUG - 2024-04-29 13:22:13 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 16:g.15802687G>G;Error from VEP for: 16:g.15802687G>G | |
| [2024-04-29 13:22:14,904] {utils.py:315} DEBUG - 2024-04-29 13:22:13 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 16:g.15808930T>T;Error from VEP for: 16:g.15808930T>T | |
| [2024-04-29 13:22:14,904] {utils.py:315} DEBUG - 2024-04-29 13:22:13 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 16:g.15818186_15818188delinsCTT;Error from VEP for: 16:g.15818186_15818188delinsCTT | |
| [2024-04-29 13:22:14,904] {utils.py:315} DEBUG - 2024-04-29 13:22:13 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 16:g.15818493G>G;Error from VEP for: 16:g.15818493G>G | |
| [2024-04-29 13:22:14,904] {utils.py:315} DEBUG - 2024-04-29 13:22:13 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 16:g.15818707C>C;Error from VEP for: 16:g.15818707C>C | |
| [2024-04-29 13:22:14,905] {utils.py:315} DEBUG - 2024-04-29 13:22:13 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 16:g.15820795_15820797delinsCTT;Error from VEP for: 16:g.15820795_15820797delinsCTT | |
| [2024-04-29 13:22:14,905] {utils.py:315} DEBUG - 2024-04-29 13:22:13 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 16:g.15857685_15857688delinsTTTC;Error from VEP for: 16:g.15857685_15857688delinsTTTC | |
| [2024-04-29 13:22:14,905] {utils.py:315} DEBUG - 2024-04-29 13:22:13 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 16:g.18849811T>T;Error from VEP for: 16:g.18849811T>T | |
| [2024-04-29 13:22:14,905] {utils.py:315} DEBUG - 2024-04-29 13:22:13 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 16:g.18890990A>A;Error from VEP for: 16:g.18890990A>A | |
| [2024-04-29 13:22:14,905] {utils.py:315} DEBUG - 2024-04-29 13:22:13 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 16:g.18937479_18937481delinsAGG;Error from VEP for: 16:g.18937479_18937481delinsAGG | |
| [2024-04-29 13:22:14,905] {utils.py:315} DEBUG - 2024-04-29 13:22:13 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 16:g.22284966C>C;Error from VEP for: 16:g.22284966C>C | |
| [2024-04-29 13:22:14,905] {utils.py:315} DEBUG - 2024-04-29 13:22:13 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 16:g.23632770G>G;Error from VEP for: 16:g.23632770G>G | |
| [2024-04-29 13:22:14,905] {utils.py:315} DEBUG - 2024-04-29 13:22:13 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 16:g.23641218G>G;Error from VEP for: 16:g.23641218G>G | |
| [2024-04-29 13:22:14,905] {utils.py:315} DEBUG - 2024-04-29 13:22:13 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 16:g.23646533T>T;Error from VEP for: 16:g.23646533T>T | |
| [2024-04-29 13:22:14,905] {utils.py:315} DEBUG - 2024-04-29 13:22:13 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 16:g.23690654G>G;Error from VEP for: 16:g.23690654G>G | |
| [2024-04-29 13:22:14,905] {utils.py:315} DEBUG - 2024-04-29 13:22:13 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 16:g.23701329_23701331delinsTGG;Error from VEP for: 16:g.23701329_23701331delinsTGG | |
| [2024-04-29 13:22:14,905] {utils.py:315} DEBUG - 2024-04-29 13:22:13 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 16:g.23712275C>C;Error from VEP for: 16:g.23712275C>C | |
| [2024-04-29 13:22:14,905] {utils.py:315} DEBUG - 2024-04-29 13:22:13 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 16:g.23724702G>G;Error from VEP for: 16:g.23724702G>G | |
| [2024-04-29 13:22:14,905] {utils.py:315} DEBUG - 2024-04-29 13:22:13 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 16:g.24104123A>A;Error from VEP for: 16:g.24104123A>A | |
| [2024-04-29 13:22:14,905] {utils.py:315} DEBUG - 2024-04-29 13:22:14 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 16:g.27460530C>C;Error from VEP for: 16:g.27460530C>C | |
| [2024-04-29 13:22:16,542] {utils.py:315} DEBUG - 2024-04-29 13:22:14 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 16:g.27460742_27460743delinsTG;Error from VEP for: 16:g.27460742_27460743delinsTG | |
| [2024-04-29 13:22:16,542] {utils.py:315} DEBUG - 2024-04-29 13:22:14 [main] INFO org.cbioportal.annotator.internal.GenomeNexusImpl - On record 22500 out of 116708, annotation 19% complete | |
| [2024-04-29 13:22:16,542] {utils.py:315} DEBUG - 2024-04-29 13:22:14 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 16:g.27460780_27460781delinsTG;Error from VEP for: 16:g.27460780_27460781delinsTG | |
| [2024-04-29 13:22:16,542] {utils.py:315} DEBUG - 2024-04-29 13:22:14 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 16:g.28331779G>G;Error from VEP for: 16:g.28331779G>G | |
| [2024-04-29 13:22:16,542] {utils.py:315} DEBUG - 2024-04-29 13:22:14 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 16:g.28332504_28332521delinsACACACACACACACACAC;Error from VEP for: 16:g.28332504_28332521delinsACACACACACACACACAC | |
| [2024-04-29 13:22:16,542] {utils.py:315} DEBUG - 2024-04-29 13:22:14 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 16:g.29994531_29994533delinsGAG;Error from VEP for: 16:g.29994531_29994533delinsGAG | |
| [2024-04-29 13:22:16,542] {utils.py:315} DEBUG - 2024-04-29 13:22:14 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 16:g.29994855_29994856delinsAG;Error from VEP for: 16:g.29994855_29994856delinsAG | |
| [2024-04-29 13:22:16,542] {utils.py:315} DEBUG - 2024-04-29 13:22:14 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 16:g.29998225_29998226delinsGA;Error from VEP for: 16:g.29998225_29998226delinsGA | |
| [2024-04-29 13:22:16,542] {utils.py:315} DEBUG - 2024-04-29 13:22:14 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 16:g.30002685G>G;Error from VEP for: 16:g.30002685G>G | |
| [2024-04-29 13:22:16,542] {utils.py:315} DEBUG - 2024-04-29 13:22:14 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 16:g.30134505C>C;Error from VEP for: 16:g.30134505C>C | |
| [2024-04-29 13:22:16,542] {utils.py:315} DEBUG - 2024-04-29 13:22:14 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 16:g.30762837_30762840delinsTCTG;Error from VEP for: 16:g.30762837_30762840delinsTCTG | |
| [2024-04-29 13:22:16,542] {utils.py:315} DEBUG - 2024-04-29 13:22:14 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 16:g.30768493_30768499delinsCTCTGGC;Error from VEP for: 16:g.30768493_30768499delinsCTCTGGC | |
| [2024-04-29 13:22:16,542] {utils.py:315} DEBUG - 2024-04-29 13:22:14 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 16:g.31072346G>G;Error from VEP for: 16:g.31072346G>G | |
| [2024-04-29 13:22:16,542] {utils.py:315} DEBUG - 2024-04-29 13:22:14 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 16:g.31072706G>G;Error from VEP for: 16:g.31072706G>G | |
| [2024-04-29 13:22:16,542] {utils.py:315} DEBUG - 2024-04-29 13:22:14 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 16:g.31072732C>C;Error from VEP for: 16:g.31072732C>C | |
| [2024-04-29 13:22:16,542] {utils.py:315} DEBUG - 2024-04-29 13:22:14 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 16:g.31120696_31120698delinsCCT;Error from VEP for: 16:g.31120696_31120698delinsCCT | |
| [2024-04-29 13:22:16,542] {utils.py:315} DEBUG - 2024-04-29 13:22:14 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 16:g.31120709_31120716delinsCCAGTCGG;Error from VEP for: 16:g.31120709_31120716delinsCCAGTCGG | |
| [2024-04-29 13:22:16,542] {utils.py:315} DEBUG - 2024-04-29 13:22:14 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 16:g.31202376G>G;Error from VEP for: 16:g.31202376G>G | |
| [2024-04-29 13:22:16,542] {utils.py:315} DEBUG - 2024-04-29 13:22:14 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 16:g.46761135G>G;Error from VEP for: 16:g.46761135G>G | |
| [2024-04-29 13:22:16,542] {utils.py:315} DEBUG - 2024-04-29 13:22:14 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 16:g.46781859G>G;Error from VEP for: 16:g.46781859G>G | |
| [2024-04-29 13:22:16,543] {utils.py:315} DEBUG - 2024-04-29 13:22:14 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 16:g.49670510C>C;Error from VEP for: 16:g.49670510C>C | |
| [2024-04-29 13:22:16,543] {utils.py:315} DEBUG - 2024-04-29 13:22:14 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 16:g.49671855C>C;Error from VEP for: 16:g.49671855C>C | |
| [2024-04-29 13:22:16,543] {utils.py:315} DEBUG - 2024-04-29 13:22:14 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 16:g.50784085C>C;Error from VEP for: 16:g.50784085C>C | |
| [2024-04-29 13:22:16,543] {utils.py:315} DEBUG - 2024-04-29 13:22:14 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 16:g.50821755A>A;Error from VEP for: 16:g.50821755A>A | |
| [2024-04-29 13:22:16,543] {utils.py:315} DEBUG - 2024-04-29 13:22:14 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 16:g.50825519A>A;Error from VEP for: 16:g.50825519A>A | |
| [2024-04-29 13:22:16,543] {utils.py:315} DEBUG - 2024-04-29 13:22:16 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 16:g.52473504_52473506delinsTGT;Error from VEP for: 16:g.52473504_52473506delinsTGT | |
| [2024-04-29 13:22:17,219] {utils.py:315} DEBUG - 2024-04-29 13:22:16 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 16:g.52473513_52473515delinsTGC;Error from VEP for: 16:g.52473513_52473515delinsTGC | |
| [2024-04-29 13:22:17,219] {utils.py:315} DEBUG - 2024-04-29 13:22:16 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 16:g.53263000T>T;Error from VEP for: 16:g.53263000T>T | |
| [2024-04-29 13:22:17,220] {utils.py:315} DEBUG - 2024-04-29 13:22:16 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 16:g.53269084T>T;Error from VEP for: 16:g.53269084T>T | |
| [2024-04-29 13:22:17,220] {utils.py:315} DEBUG - 2024-04-29 13:22:16 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 16:g.53337669_53337671delinsAGA;Error from VEP for: 16:g.53337669_53337671delinsAGA | |
| [2024-04-29 13:22:17,220] {utils.py:315} DEBUG - 2024-04-29 13:22:16 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 16:g.53338410_53338412delinsTTC;Error from VEP for: 16:g.53338410_53338412delinsTTC | |
| [2024-04-29 13:22:17,220] {utils.py:315} DEBUG - 2024-04-29 13:22:16 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 16:g.53338483_53338488delinsTCTTCA;Error from VEP for: 16:g.53338483_53338488delinsTCTTCA | |
| [2024-04-29 13:22:17,220] {utils.py:315} DEBUG - 2024-04-29 13:22:16 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 16:g.53348351A>A;Error from VEP for: 16:g.53348351A>A | |
| [2024-04-29 13:22:17,220] {utils.py:315} DEBUG - 2024-04-29 13:22:16 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 16:g.53358011G>G;Error from VEP for: 16:g.53358011G>G | |
| [2024-04-29 13:22:17,220] {utils.py:315} DEBUG - 2024-04-29 13:22:16 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 16:g.53358016A>A;Error from VEP for: 16:g.53358016A>A | |
| [2024-04-29 13:22:17,220] {utils.py:315} DEBUG - 2024-04-29 13:22:16 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 16:g.53358641_53358643delinsAAG;Error from VEP for: 16:g.53358641_53358643delinsAAG | |
| [2024-04-29 13:22:17,220] {utils.py:315} DEBUG - 2024-04-29 13:22:16 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 16:g.53476704T>T;Error from VEP for: 16:g.53476704T>T | |
| [2024-04-29 13:22:17,220] {utils.py:315} DEBUG - 2024-04-29 13:22:16 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 16:g.53485672C>C;Error from VEP for: 16:g.53485672C>C | |
| [2024-04-29 13:22:17,220] {utils.py:315} DEBUG - 2024-04-29 13:22:16 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 16:g.53487526T>T;Error from VEP for: 16:g.53487526T>T | |
| [2024-04-29 13:22:17,220] {utils.py:315} DEBUG - 2024-04-29 13:22:16 [main] INFO org.cbioportal.annotator.internal.GenomeNexusImpl - On record 23000 out of 116708, annotation 19% complete | |
| [2024-04-29 13:22:17,220] {utils.py:315} DEBUG - 2024-04-29 13:22:16 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 16:g.55527106C>C;Error from VEP for: 16:g.55527106C>C | |
| [2024-04-29 13:22:17,220] {utils.py:315} DEBUG - 2024-04-29 13:22:16 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 16:g.64981444C>C;Error from VEP for: 16:g.64981444C>C | |
| [2024-04-29 13:22:17,220] {utils.py:315} DEBUG - 2024-04-29 13:22:16 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 16:g.65025791C>C;Error from VEP for: 16:g.65025791C>C | |
| [2024-04-29 13:22:17,220] {utils.py:315} DEBUG - 2024-04-29 13:22:16 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 16:g.65032684C>C;Error from VEP for: 16:g.65032684C>C | |
| [2024-04-29 13:22:17,220] {utils.py:315} DEBUG - 2024-04-29 13:22:16 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 16:g.67070584C>C;Error from VEP for: 16:g.67070584C>C | |
| [2024-04-29 13:22:17,220] {utils.py:315} DEBUG - 2024-04-29 13:22:16 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 16:g.67132905T>T;Error from VEP for: 16:g.67132905T>T | |
| [2024-04-29 13:22:17,220] {utils.py:315} DEBUG - 2024-04-29 13:22:16 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 16:g.68835766G>G;Error from VEP for: 16:g.68835766G>G | |
| [2024-04-29 13:22:17,220] {utils.py:315} DEBUG - 2024-04-29 13:22:16 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 16:g.68835781C>C;Error from VEP for: 16:g.68835781C>C | |
| [2024-04-29 13:22:17,220] {utils.py:315} DEBUG - 2024-04-29 13:22:16 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 16:g.68842427_68842444delinsGCCCAGAAAATGAAAAAG;Error from VEP for: 16:g.68842427_68842444delinsGCCCAGAAAATGAAAAAG | |
| [2024-04-29 13:22:17,220] {utils.py:315} DEBUG - 2024-04-29 13:22:16 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 16:g.68842751_68842752delinsTG;Error from VEP for: 16:g.68842751_68842752delinsTG | |
| [2024-04-29 13:22:17,220] {utils.py:315} DEBUG - 2024-04-29 13:22:16 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 16:g.68849545_68849562delinsCCCCCATCTTTGTGCCTC;Error from VEP for: 16:g.68849545_68849562delinsCCCCCATCTTTGTGCCTC | |
| [2024-04-29 13:22:17,220] {utils.py:315} DEBUG - 2024-04-29 13:22:16 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 16:g.68867468T>T;Error from VEP for: 16:g.68867468T>T | |
| [2024-04-29 13:22:17,220] {utils.py:315} DEBUG - 2024-04-29 13:22:16 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 16:g.68867505A>A;Error from VEP for: 16:g.68867505A>A | |
| [2024-04-29 13:22:17,220] {utils.py:315} DEBUG - 2024-04-29 13:22:16 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 16:g.68867612_68867613delinsTT;Error from VEP for: 16:g.68867612_68867613delinsTT | |
| [2024-04-29 13:22:17,220] {utils.py:315} DEBUG - 2024-04-29 13:22:16 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 16:g.74485842A>A;Error from VEP for: 16:g.74485842A>A | |
| [2024-04-29 13:22:17,220] {utils.py:315} DEBUG - 2024-04-29 13:22:17 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 16:g.74706328_74706329delinsGA;Error from VEP for: 16:g.74706328_74706329delinsGA | |
| [2024-04-29 13:22:18,099] {utils.py:315} DEBUG - 2024-04-29 13:22:17 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 16:g.74709590_74709591delinsCT;Error from VEP for: 16:g.74709590_74709591delinsCT | |
| [2024-04-29 13:22:18,099] {utils.py:315} DEBUG - 2024-04-29 13:22:17 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 16:g.74709591_74709594delinsTCTG;Error from VEP for: 16:g.74709591_74709594delinsTCTG | |
| [2024-04-29 13:22:18,099] {utils.py:315} DEBUG - 2024-04-29 13:22:17 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 16:g.74716579A>A;Error from VEP for: 16:g.74716579A>A | |
| [2024-04-29 13:22:18,099] {utils.py:315} DEBUG - 2024-04-29 13:22:17 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 16:g.75271108C>C;Error from VEP for: 16:g.75271108C>C | |
| [2024-04-29 13:22:18,099] {utils.py:315} DEBUG - 2024-04-29 13:22:17 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 16:g.77356311A>A;Error from VEP for: 16:g.77356311A>A | |
| [2024-04-29 13:22:18,099] {utils.py:315} DEBUG - 2024-04-29 13:22:17 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 16:g.79628325A>A;Error from VEP for: 16:g.79628325A>A | |
| [2024-04-29 13:22:18,099] {utils.py:315} DEBUG - 2024-04-29 13:22:17 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 16:g.79628326T>T;Error from VEP for: 16:g.79628326T>T | |
| [2024-04-29 13:22:18,099] {utils.py:315} DEBUG - 2024-04-29 13:22:17 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 16:g.79628537T>T;Error from VEP for: 16:g.79628537T>T | |
| [2024-04-29 13:22:18,099] {utils.py:315} DEBUG - 2024-04-29 13:22:18 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 16:g.79628537T>T;Error from VEP for: 16:g.79628537T>T | |
| [2024-04-29 13:22:19,220] {utils.py:315} DEBUG - 2024-04-29 13:22:18 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 16:g.79628537_79628538delinsTT;Error from VEP for: 16:g.79628537_79628538delinsTT | |
| [2024-04-29 13:22:19,220] {utils.py:315} DEBUG - 2024-04-29 13:22:18 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 16:g.79628537_79628539delinsTTT;Error from VEP for: 16:g.79628537_79628539delinsTTT | |
| [2024-04-29 13:22:19,220] {utils.py:315} DEBUG - 2024-04-29 13:22:18 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 16:g.79628610A>A;Error from VEP for: 16:g.79628610A>A | |
| [2024-04-29 13:22:19,220] {utils.py:315} DEBUG - 2024-04-29 13:22:18 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 16:g.79632479_79632480delinsGT;Error from VEP for: 16:g.79632479_79632480delinsGT | |
| [2024-04-29 13:22:19,220] {utils.py:315} DEBUG - 2024-04-29 13:22:18 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 16:g.79632525_79632526delinsTG;Error from VEP for: 16:g.79632525_79632526delinsTG | |
| [2024-04-29 13:22:19,221] {utils.py:315} DEBUG - 2024-04-29 13:22:18 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 16:g.79633806_79633808delinsGCC;Error from VEP for: 16:g.79633806_79633808delinsGCC | |
| [2024-04-29 13:22:19,221] {utils.py:315} DEBUG - 2024-04-29 13:22:18 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 16:g.81819650_81819651delinsAG;Error from VEP for: 16:g.81819650_81819651delinsAG | |
| [2024-04-29 13:22:19,221] {utils.py:315} DEBUG - 2024-04-29 13:22:18 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 16:g.81904462_81904464delinsAGG;Error from VEP for: 16:g.81904462_81904464delinsAGG | |
| [2024-04-29 13:22:19,221] {utils.py:315} DEBUG - 2024-04-29 13:22:18 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 16:g.81954974_81954975delinsTT;Error from VEP for: 16:g.81954974_81954975delinsTT | |
| [2024-04-29 13:22:19,221] {utils.py:315} DEBUG - 2024-04-29 13:22:18 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 16:g.81954997T>T;Error from VEP for: 16:g.81954997T>T | |
| [2024-04-29 13:22:19,221] {utils.py:315} DEBUG - 2024-04-29 13:22:18 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 16:g.81954997_81954998delinsTT;Error from VEP for: 16:g.81954997_81954998delinsTT | |
| [2024-04-29 13:22:19,221] {utils.py:315} DEBUG - 2024-04-29 13:22:18 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 16:g.81954997_81954999delinsTTT;Error from VEP for: 16:g.81954997_81954999delinsTTT | |
| [2024-04-29 13:22:19,221] {utils.py:315} DEBUG - 2024-04-29 13:22:18 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 16:g.81954997_81955000delinsTTTT;Error from VEP for: 16:g.81954997_81955000delinsTTTT | |
| [2024-04-29 13:22:19,221] {utils.py:315} DEBUG - 2024-04-29 13:22:18 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 16:g.81954997_81955001delinsTTTTT;Error from VEP for: 16:g.81954997_81955001delinsTTTTT | |
| [2024-04-29 13:22:19,221] {utils.py:315} DEBUG - 2024-04-29 13:22:18 [main] INFO org.cbioportal.annotator.internal.GenomeNexusImpl - On record 23500 out of 116708, annotation 20% complete | |
| [2024-04-29 13:22:19,221] {utils.py:315} DEBUG - 2024-04-29 13:22:18 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 16:g.81990349_81990351delinsAAG;Error from VEP for: 16:g.81990349_81990351delinsAAG | |
| [2024-04-29 13:22:19,221] {utils.py:315} DEBUG - 2024-04-29 13:22:18 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 16:g.88951484G>G;Error from VEP for: 16:g.88951484G>G | |
| [2024-04-29 13:22:19,221] {utils.py:315} DEBUG - 2024-04-29 13:22:18 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 16:g.89753116G>G;Error from VEP for: 16:g.89753116G>G | |
| [2024-04-29 13:22:19,221] {utils.py:315} DEBUG - 2024-04-29 13:22:18 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 16:g.89759883_89759885delinsCTT;Error from VEP for: 16:g.89759883_89759885delinsCTT | |
| [2024-04-29 13:22:19,221] {utils.py:315} DEBUG - 2024-04-29 13:22:18 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 16:g.89760800_89760802delinsAGG;Error from VEP for: 16:g.89760800_89760802delinsAGG | |
| [2024-04-29 13:22:19,221] {utils.py:315} DEBUG - 2024-04-29 13:22:18 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 16:g.89805176_89805191delinsAGGGGCTCTGGCAGAA;Error from VEP for: 16:g.89805176_89805191delinsAGGGGCTCTGGCAGAA | |
| [2024-04-29 13:22:19,221] {utils.py:315} DEBUG - 2024-04-29 13:22:18 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 16:g.89805381C>C;Error from VEP for: 16:g.89805381C>C | |
| [2024-04-29 13:22:19,221] {utils.py:315} DEBUG - 2024-04-29 13:22:18 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 16:g.89805499G>G;Error from VEP for: 16:g.89805499G>G | |
| [2024-04-29 13:22:19,221] {utils.py:315} DEBUG - 2024-04-29 13:22:18 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 16:g.89831345_89831346delinsAG;Error from VEP for: 16:g.89831345_89831346delinsAG | |
| [2024-04-29 13:22:19,221] {utils.py:315} DEBUG - 2024-04-29 13:22:18 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 16:g.89858927_89858928delinsCT;Error from VEP for: 16:g.89858927_89858928delinsCT | |
| [2024-04-29 13:22:19,221] {utils.py:315} DEBUG - 2024-04-29 13:22:18 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 16:g.89869675T>T;Error from VEP for: 16:g.89869675T>T | |
| [2024-04-29 13:22:19,221] {utils.py:315} DEBUG - 2024-04-29 13:22:18 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 16:g.89880996A>A;Error from VEP for: 16:g.89880996A>A | |
| [2024-04-29 13:22:19,221] {utils.py:315} DEBUG - 2024-04-29 13:22:18 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 17:g.3628298A>A;Error from VEP for: 17:g.3628298A>A | |
| [2024-04-29 13:22:19,221] {utils.py:315} DEBUG - 2024-04-29 13:22:18 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 17:g.3628460_3628461delinsTC;Error from VEP for: 17:g.3628460_3628461delinsTC | |
| [2024-04-29 13:22:19,221] {utils.py:315} DEBUG - 2024-04-29 13:22:18 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 17:g.3629216A>A;Error from VEP for: 17:g.3629216A>A | |
| [2024-04-29 13:22:19,221] {utils.py:315} DEBUG - 2024-04-29 13:22:18 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 17:g.3785646T>T;Error from VEP for: 17:g.3785646T>T | |
| [2024-04-29 13:22:19,221] {utils.py:315} DEBUG - 2024-04-29 13:22:18 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 17:g.4799884_4799887delinsGTGA;Error from VEP for: 17:g.4799884_4799887delinsGTGA | |
| [2024-04-29 13:22:19,221] {utils.py:315} DEBUG - 2024-04-29 13:22:18 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 17:g.5048786_5048787delinsAT;Error from VEP for: 17:g.5048786_5048787delinsAT | |
| [2024-04-29 13:22:19,221] {utils.py:315} DEBUG - 2024-04-29 13:22:18 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 17:g.5072211G>G;Error from VEP for: 17:g.5072211G>G | |
| [2024-04-29 13:22:19,221] {utils.py:315} DEBUG - 2024-04-29 13:22:18 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 17:g.5241516A>A;Error from VEP for: 17:g.5241516A>A | |
| [2024-04-29 13:22:19,221] {utils.py:315} DEBUG - 2024-04-29 13:22:18 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 17:g.5257696A>A;Error from VEP for: 17:g.5257696A>A | |
| [2024-04-29 13:22:19,221] {utils.py:315} DEBUG - 2024-04-29 13:22:19 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 17:g.5281724A>A;Error from VEP for: 17:g.5281724A>A | |
| [2024-04-29 13:22:20,204] {utils.py:315} DEBUG - 2024-04-29 13:22:19 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 17:g.5418227G>G;Error from VEP for: 17:g.5418227G>G | |
| [2024-04-29 13:22:20,204] {utils.py:315} DEBUG - 2024-04-29 13:22:19 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 17:g.5461960_5461961delinsTC;Error from VEP for: 17:g.5461960_5461961delinsTC | |
| [2024-04-29 13:22:20,204] {utils.py:315} DEBUG - 2024-04-29 13:22:19 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 17:g.5462268T>T;Error from VEP for: 17:g.5462268T>T | |
| [2024-04-29 13:22:20,204] {utils.py:315} DEBUG - 2024-04-29 13:22:19 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 17:g.5463133G>G;Error from VEP for: 17:g.5463133G>G | |
| [2024-04-29 13:22:20,204] {utils.py:315} DEBUG - 2024-04-29 13:22:19 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 17:g.5487224_5487226delinsCTT;Error from VEP for: 17:g.5487224_5487226delinsCTT | |
| [2024-04-29 13:22:20,204] {utils.py:315} DEBUG - 2024-04-29 13:22:19 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 17:g.7481846_7481847delinsTG;Error from VEP for: 17:g.7481846_7481847delinsTG | |
| [2024-04-29 13:22:20,204] {utils.py:315} DEBUG - 2024-04-29 13:22:19 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 17:g.7482019A>A;Error from VEP for: 17:g.7482019A>A | |
| [2024-04-29 13:22:20,204] {utils.py:315} DEBUG - 2024-04-29 13:22:19 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 17:g.7576879_7576880delinsGT;Error from VEP for: 17:g.7576879_7576880delinsGT | |
| [2024-04-29 13:22:20,204] {utils.py:315} DEBUG - 2024-04-29 13:22:19 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 17:g.7577036G>G;Error from VEP for: 17:g.7577036G>G | |
| [2024-04-29 13:22:20,204] {utils.py:315} DEBUG - 2024-04-29 13:22:19 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 17:g.7577077_7577082delinsCTCTTC;Error from VEP for: 17:g.7577077_7577082delinsCTCTTC | |
| [2024-04-29 13:22:20,204] {utils.py:315} DEBUG - 2024-04-29 13:22:19 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 17:g.7577080_7577088delinsTTCCTCTGT;Error from VEP for: 17:g.7577080_7577088delinsTTCCTCTGT | |
| [2024-04-29 13:22:20,204] {utils.py:315} DEBUG - 2024-04-29 13:22:19 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 17:g.7577086_7577087delinsTG;Error from VEP for: 17:g.7577086_7577087delinsTG | |
| [2024-04-29 13:22:20,204] {utils.py:315} DEBUG - 2024-04-29 13:22:19 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 17:g.7577101C>C;Error from VEP for: 17:g.7577101C>C | |
| [2024-04-29 13:22:20,204] {utils.py:315} DEBUG - 2024-04-29 13:22:19 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 17:g.7577137C>C;Error from VEP for: 17:g.7577137C>C | |
| [2024-04-29 13:22:20,204] {utils.py:315} DEBUG - 2024-04-29 13:22:19 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 17:g.7577150_7577159delinsTTACCACTAC;Error from VEP for: 17:g.7577150_7577159delinsTTACCACTAC | |
| [2024-04-29 13:22:20,204] {utils.py:315} DEBUG - 2024-04-29 13:22:19 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 17:g.7577495_7577514delinsTGACCTGGAGTCTTCCAGTG;Error from VEP for: 17:g.7577495_7577514delinsTGACCTGGAGTCTTCCAGTG | |
| [2024-04-29 13:22:20,204] {utils.py:315} DEBUG - 2024-04-29 13:22:19 [main] INFO org.cbioportal.annotator.internal.GenomeNexusImpl - On record 24000 out of 116708, annotation 20% complete | |
| [2024-04-29 13:22:20,204] {utils.py:315} DEBUG - 2024-04-29 13:22:19 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 17:g.7577529A>A;Error from VEP for: 17:g.7577529A>A | |
| [2024-04-29 13:22:20,205] {utils.py:315} DEBUG - 2024-04-29 13:22:19 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 17:g.7577556_7577569delinsCAGGAACTGTTACA;Error from VEP for: 17:g.7577556_7577569delinsCAGGAACTGTTACA | |
| [2024-04-29 13:22:20,205] {utils.py:315} DEBUG - 2024-04-29 13:22:19 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 17:g.7577575_7577585delinsAGTTGTAGTGG;Error from VEP for: 17:g.7577575_7577585delinsAGTTGTAGTGG | |
| [2024-04-29 13:22:20,205] {utils.py:315} DEBUG - 2024-04-29 13:22:19 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 17:g.7577582_7577584delinsGTG;Error from VEP for: 17:g.7577582_7577584delinsGTG | |
| [2024-04-29 13:22:20,205] {utils.py:315} DEBUG - 2024-04-29 13:22:19 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 17:g.7577594_7577595delinsAC;Error from VEP for: 17:g.7577594_7577595delinsAC | |
| [2024-04-29 13:22:20,205] {utils.py:315} DEBUG - 2024-04-29 13:22:19 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 17:g.7578192_7578193delinsGG;Error from VEP for: 17:g.7578192_7578193delinsGG | |
| [2024-04-29 13:22:20,205] {utils.py:315} DEBUG - 2024-04-29 13:22:19 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 17:g.7578195_7578197delinsCAC;Error from VEP for: 17:g.7578195_7578197delinsCAC | |
| [2024-04-29 13:22:20,205] {utils.py:315} DEBUG - 2024-04-29 13:22:19 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 17:g.7578204_7578206delinsACT;Error from VEP for: 17:g.7578204_7578206delinsACT | |
| [2024-04-29 13:22:20,205] {utils.py:315} DEBUG - 2024-04-29 13:22:20 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 17:g.7578222_7578223delinsTC;Error from VEP for: 17:g.7578222_7578223delinsTC | |
| [2024-04-29 13:22:22,338] {utils.py:315} DEBUG - 2024-04-29 13:22:20 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 17:g.7578253_7578257delinsCCTTC;Error from VEP for: 17:g.7578253_7578257delinsCCTTC | |
| [2024-04-29 13:22:22,338] {utils.py:315} DEBUG - 2024-04-29 13:22:20 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 17:g.7578257_7578272delinsCCACTCGGATAAGATG;Error from VEP for: 17:g.7578257_7578272delinsCCACTCGGATAAGATG | |
| [2024-04-29 13:22:22,338] {utils.py:315} DEBUG - 2024-04-29 13:22:20 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 17:g.7578269_7578280delinsGATGCTGAGGAG;Error from VEP for: 17:g.7578269_7578280delinsGATGCTGAGGAG | |
| [2024-04-29 13:22:22,338] {utils.py:315} DEBUG - 2024-04-29 13:22:20 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 17:g.7578277G>G;Error from VEP for: 17:g.7578277G>G | |
| [2024-04-29 13:22:22,338] {utils.py:315} DEBUG - 2024-04-29 13:22:20 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 17:g.7578385_7578410delinsCAGCGCTCATGGTGGGGGCAGCGCCT;Error from VEP for: 17:g.7578385_7578410delinsCAGCGCTCATGGTGGGGGCAGCGCCT | |
| [2024-04-29 13:22:22,338] {utils.py:315} DEBUG - 2024-04-29 13:22:20 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 17:g.7578391T>T;Error from VEP for: 17:g.7578391T>T | |
| [2024-04-29 13:22:22,338] {utils.py:315} DEBUG - 2024-04-29 13:22:20 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 17:g.7578410_7578412delinsTCA;Error from VEP for: 17:g.7578410_7578412delinsTCA | |
| [2024-04-29 13:22:22,338] {utils.py:315} DEBUG - 2024-04-29 13:22:20 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 17:g.7578464_7578476delinsGGGTGCCGGGCGG;Error from VEP for: 17:g.7578464_7578476delinsGGGTGCCGGGCGG | |
| [2024-04-29 13:22:22,338] {utils.py:315} DEBUG - 2024-04-29 13:22:20 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 17:g.7578475G>G;Error from VEP for: 17:g.7578475G>G | |
| [2024-04-29 13:22:22,338] {utils.py:315} DEBUG - 2024-04-29 13:22:20 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 17:g.7578484_7578492delinsGAATCAACC;Error from VEP for: 17:g.7578484_7578492delinsGAATCAACC | |
| [2024-04-29 13:22:22,338] {utils.py:315} DEBUG - 2024-04-29 13:22:20 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 17:g.7578504_7578505delinsAG;Error from VEP for: 17:g.7578504_7578505delinsAG | |
| [2024-04-29 13:22:22,338] {utils.py:315} DEBUG - 2024-04-29 13:22:20 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 17:g.7578513C>C;Error from VEP for: 17:g.7578513C>C | |
| [2024-04-29 13:22:22,338] {utils.py:315} DEBUG - 2024-04-29 13:22:20 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 17:g.7578516G>G;Error from VEP for: 17:g.7578516G>G | |
| [2024-04-29 13:22:22,338] {utils.py:315} DEBUG - 2024-04-29 13:22:20 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 17:g.7578527A>A;Error from VEP for: 17:g.7578527A>A | |
| [2024-04-29 13:22:22,338] {utils.py:315} DEBUG - 2024-04-29 13:22:20 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 17:g.7578527_7578528delinsAA;Error from VEP for: 17:g.7578527_7578528delinsAA | |
| [2024-04-29 13:22:22,338] {utils.py:315} DEBUG - 2024-04-29 13:22:20 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 17:g.7578546_7578558delinsAGGGGAGTACTGT;Error from VEP for: 17:g.7578546_7578558delinsAGGGGAGTACTGT | |
| [2024-04-29 13:22:22,338] {utils.py:315} DEBUG - 2024-04-29 13:22:20 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 17:g.7578677_7578678delinsAG;Error from VEP for: 17:g.7578677_7578678delinsAG | |
| [2024-04-29 13:22:22,338] {utils.py:315} DEBUG - 2024-04-29 13:22:20 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 17:g.7578712_7578713delinsTT;Error from VEP for: 17:g.7578712_7578713delinsTT | |
| [2024-04-29 13:22:22,338] {utils.py:315} DEBUG - 2024-04-29 13:22:20 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 17:g.7578712_7578714delinsTTT;Error from VEP for: 17:g.7578712_7578714delinsTTT | |
| [2024-04-29 13:22:22,338] {utils.py:315} DEBUG - 2024-04-29 13:22:20 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 17:g.7579420G>G;Error from VEP for: 17:g.7579420G>G | |
| [2024-04-29 13:22:22,338] {utils.py:315} DEBUG - 2024-04-29 13:22:20 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 17:g.7579580G>G;Error from VEP for: 17:g.7579580G>G | |
| [2024-04-29 13:22:22,339] {utils.py:315} DEBUG - 2024-04-29 13:22:20 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 17:g.7579585G>G;Error from VEP for: 17:g.7579585G>G | |
| [2024-04-29 13:22:22,339] {utils.py:315} DEBUG - 2024-04-29 13:22:20 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 17:g.8048006C>C;Error from VEP for: 17:g.8048006C>C | |
| [2024-04-29 13:22:22,339] {utils.py:315} DEBUG - 2024-04-29 13:22:20 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 17:g.8415878T>T;Error from VEP for: 17:g.8415878T>T | |
| [2024-04-29 13:22:22,339] {utils.py:315} DEBUG - 2024-04-29 13:22:20 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 17:g.8438774G>G;Error from VEP for: 17:g.8438774G>G | |
| [2024-04-29 13:22:22,339] {utils.py:315} DEBUG - 2024-04-29 13:22:20 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 17:g.8526464T>T;Error from VEP for: 17:g.8526464T>T | |
| [2024-04-29 13:22:22,339] {utils.py:315} DEBUG - 2024-04-29 13:22:20 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 17:g.9820461G>G;Error from VEP for: 17:g.9820461G>G | |
| [2024-04-29 13:22:22,339] {utils.py:315} DEBUG - 2024-04-29 13:22:20 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 17:g.9862623T>T;Error from VEP for: 17:g.9862623T>T | |
| [2024-04-29 13:22:22,339] {utils.py:315} DEBUG - 2024-04-29 13:22:20 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 17:g.9862629C>C;Error from VEP for: 17:g.9862629C>C | |
| [2024-04-29 13:22:22,339] {utils.py:315} DEBUG - 2024-04-29 13:22:20 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 17:g.10101576_10101578delinsCTT;Error from VEP for: 17:g.10101576_10101578delinsCTT | |
| [2024-04-29 13:22:22,339] {utils.py:315} DEBUG - 2024-04-29 13:22:20 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 17:g.10400618T>T;Error from VEP for: 17:g.10400618T>T | |
| [2024-04-29 13:22:22,339] {utils.py:315} DEBUG - 2024-04-29 13:22:22 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 17:g.10406224T>T;Error from VEP for: 17:g.10406224T>T | |
| [2024-04-29 13:22:22,339] {utils.py:315} DEBUG - 2024-04-29 13:22:22 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 17:g.10411917_10411918delinsTG;Error from VEP for: 17:g.10411917_10411918delinsTG | |
| [2024-04-29 13:22:22,339] {utils.py:315} DEBUG - 2024-04-29 13:22:22 [main] INFO org.cbioportal.annotator.internal.GenomeNexusImpl - On record 24500 out of 116708, annotation 20% complete | |
| [2024-04-29 13:22:22,339] {utils.py:315} DEBUG - 2024-04-29 13:22:22 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 17:g.11958296A>A;Error from VEP for: 17:g.11958296A>A | |
| [2024-04-29 13:22:22,339] {utils.py:315} DEBUG - 2024-04-29 13:22:22 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 17:g.12044602A>A;Error from VEP for: 17:g.12044602A>A | |
| [2024-04-29 13:22:22,339] {utils.py:315} DEBUG - 2024-04-29 13:22:22 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 17:g.16855854G>G;Error from VEP for: 17:g.16855854G>G | |
| [2024-04-29 13:22:22,339] {utils.py:315} DEBUG - 2024-04-29 13:22:22 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 17:g.19285630C>C;Error from VEP for: 17:g.19285630C>C | |
| [2024-04-29 13:22:23,228] {utils.py:315} DEBUG - 2024-04-29 13:22:22 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 17:g.19285705G>G;Error from VEP for: 17:g.19285705G>G | |
| [2024-04-29 13:22:23,228] {utils.py:315} DEBUG - 2024-04-29 13:22:22 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 17:g.19687070G>G;Error from VEP for: 17:g.19687070G>G | |
| [2024-04-29 13:22:23,228] {utils.py:315} DEBUG - 2024-04-29 13:22:22 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 17:g.19729453T>T;Error from VEP for: 17:g.19729453T>T | |
| [2024-04-29 13:22:23,228] {utils.py:315} DEBUG - 2024-04-29 13:22:22 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 17:g.25910016C>C;Error from VEP for: 17:g.25910016C>C | |
| [2024-04-29 13:22:23,228] {utils.py:315} DEBUG - 2024-04-29 13:22:22 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 17:g.26369893A>A;Error from VEP for: 17:g.26369893A>A | |
| [2024-04-29 13:22:23,228] {utils.py:315} DEBUG - 2024-04-29 13:22:22 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 17:g.26369987_26369992delinsCACCAT;Error from VEP for: 17:g.26369987_26369992delinsCACCAT | |
| [2024-04-29 13:22:23,228] {utils.py:315} DEBUG - 2024-04-29 13:22:22 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 17:g.26370014_26370016delinsCCT;Error from VEP for: 17:g.26370014_26370016delinsCCT | |
| [2024-04-29 13:22:23,228] {utils.py:315} DEBUG - 2024-04-29 13:22:22 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 17:g.26370116_26370130delinsGCGGCAGCCGCAGCA;Error from VEP for: 17:g.26370116_26370130delinsGCGGCAGCCGCAGCA | |
| [2024-04-29 13:22:23,228] {utils.py:315} DEBUG - 2024-04-29 13:22:22 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 17:g.26449740T>T;Error from VEP for: 17:g.26449740T>T | |
| [2024-04-29 13:22:23,229] {utils.py:315} DEBUG - 2024-04-29 13:22:22 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 17:g.26521949A>A;Error from VEP for: 17:g.26521949A>A | |
| [2024-04-29 13:22:23,229] {utils.py:315} DEBUG - 2024-04-29 13:22:22 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 17:g.26941135_26941152delinsCCCCTGCTGGGTGTGCTG;Error from VEP for: 17:g.26941135_26941152delinsCCCCTGCTGGGTGTGCTG | |
| [2024-04-29 13:22:23,229] {utils.py:315} DEBUG - 2024-04-29 13:22:22 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 17:g.27869780G>G;Error from VEP for: 17:g.27869780G>G | |
| [2024-04-29 13:22:23,229] {utils.py:315} DEBUG - 2024-04-29 13:22:22 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 17:g.27870147_27870148delinsGA;Error from VEP for: 17:g.27870147_27870148delinsGA | |
| [2024-04-29 13:22:23,229] {utils.py:315} DEBUG - 2024-04-29 13:22:23 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 17:g.29548963_29548965delinsTTT;Error from VEP for: 17:g.29548963_29548965delinsTTT | |
| [2024-04-29 13:22:24,104] {utils.py:315} DEBUG - 2024-04-29 13:22:23 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 17:g.29552144T>T;Error from VEP for: 17:g.29552144T>T | |
| [2024-04-29 13:22:24,104] {utils.py:315} DEBUG - 2024-04-29 13:22:23 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 17:g.29553478C>C;Error from VEP for: 17:g.29553478C>C | |
| [2024-04-29 13:22:24,104] {utils.py:315} DEBUG - 2024-04-29 13:22:23 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 17:g.29557382G>G;Error from VEP for: 17:g.29557382G>G | |
| [2024-04-29 13:22:24,104] {utils.py:315} DEBUG - 2024-04-29 13:22:23 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 17:g.29557929A>A;Error from VEP for: 17:g.29557929A>A | |
| [2024-04-29 13:22:24,104] {utils.py:315} DEBUG - 2024-04-29 13:22:23 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 17:g.29562657_29562660delinsTGTT;Error from VEP for: 17:g.29562657_29562660delinsTGTT | |
| [2024-04-29 13:22:24,104] {utils.py:315} DEBUG - 2024-04-29 13:22:23 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 17:g.29562745C>C;Error from VEP for: 17:g.29562745C>C | |
| [2024-04-29 13:22:24,104] {utils.py:315} DEBUG - 2024-04-29 13:22:23 [main] INFO org.cbioportal.annotator.internal.GenomeNexusImpl - On record 25000 out of 116708, annotation 21% complete | |
| [2024-04-29 13:22:24,104] {utils.py:315} DEBUG - 2024-04-29 13:22:23 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 17:g.29667620A>A;Error from VEP for: 17:g.29667620A>A | |
| [2024-04-29 13:22:24,104] {utils.py:315} DEBUG - 2024-04-29 13:22:23 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 17:g.29684320G>G;Error from VEP for: 17:g.29684320G>G | |
| [2024-04-29 13:22:24,104] {utils.py:315} DEBUG - 2024-04-29 13:22:23 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 17:g.29701297C>C;Error from VEP for: 17:g.29701297C>C | |
| [2024-04-29 13:22:24,104] {utils.py:315} DEBUG - 2024-04-29 13:22:23 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 17:g.30315461_30315462delinsAG;Error from VEP for: 17:g.30315461_30315462delinsAG | |
| [2024-04-29 13:22:24,104] {utils.py:315} DEBUG - 2024-04-29 13:22:23 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 17:g.34149739_34149741delinsATG;Error from VEP for: 17:g.34149739_34149741delinsATG | |
| [2024-04-29 13:22:24,104] {utils.py:315} DEBUG - 2024-04-29 13:22:23 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 17:g.34165493G>G;Error from VEP for: 17:g.34165493G>G | |
| [2024-04-29 13:22:24,104] {utils.py:315} DEBUG - 2024-04-29 13:22:23 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 17:g.34169406T>T;Error from VEP for: 17:g.34169406T>T | |
| [2024-04-29 13:22:24,104] {utils.py:315} DEBUG - 2024-04-29 13:22:23 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 17:g.34171624_34171650delinsAGAAGTGGGGGCGGCTATGGTGGAGAC;Error from VEP for: 17:g.34171624_34171650delinsAGAAGTGGGGGCGGCTATGGTGGAGAC | |
| [2024-04-29 13:22:24,104] {utils.py:315} DEBUG - 2024-04-29 13:22:23 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 17:g.34171636_34171662delinsGGCTATGGTGGAGACAGAAGTGGGGGT;Error from VEP for: 17:g.34171636_34171662delinsGGCTATGGTGGAGACAGAAGTGGGGGT | |
| [2024-04-29 13:22:24,104] {utils.py:315} DEBUG - 2024-04-29 13:22:23 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 17:g.34171660_34171683delinsGGTGGCTATGGTGGGGACAGAGGC;Error from VEP for: 17:g.34171660_34171683delinsGGTGGCTATGGTGGGGACAGAGGC | |
| [2024-04-29 13:22:24,104] {utils.py:315} DEBUG - 2024-04-29 13:22:23 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 17:g.34171663_34171686delinsGGCTATGGTGGGGACAGAGGCGGC;Error from VEP for: 17:g.34171663_34171686delinsGGCTATGGTGGGGACAGAGGCGGC | |
| [2024-04-29 13:22:24,104] {utils.py:315} DEBUG - 2024-04-29 13:22:23 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 17:g.34171684_34171707delinsGGCGGCTATGGTGGGGACAGAGGA;Error from VEP for: 17:g.34171684_34171707delinsGGCGGCTATGGTGGGGACAGAGGA | |
| [2024-04-29 13:22:24,104] {utils.py:315} DEBUG - 2024-04-29 13:22:23 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 17:g.34171795_34171815delinsCGAGGAGGCTATGGAGGAGAT;Error from VEP for: 17:g.34171795_34171815delinsCGAGGAGGCTATGGAGGAGAT | |
| [2024-04-29 13:22:24,104] {utils.py:315} DEBUG - 2024-04-29 13:22:23 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 17:g.34171807_34171827delinsGGAGGAGATCGAGGAGGTTAC;Error from VEP for: 17:g.34171807_34171827delinsGGAGGAGATCGAGGAGGTTAC | |
| [2024-04-29 13:22:24,104] {utils.py:315} DEBUG - 2024-04-29 13:22:23 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 17:g.34171886G>G;Error from VEP for: 17:g.34171886G>G | |
| [2024-04-29 13:22:24,104] {utils.py:315} DEBUG - 2024-04-29 13:22:23 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 17:g.35578553A>A;Error from VEP for: 17:g.35578553A>A | |
| [2024-04-29 13:22:24,104] {utils.py:315} DEBUG - 2024-04-29 13:22:23 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 17:g.35608932T>T;Error from VEP for: 17:g.35608932T>T | |
| [2024-04-29 13:22:24,104] {utils.py:315} DEBUG - 2024-04-29 13:22:23 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 17:g.35766564A>A;Error from VEP for: 17:g.35766564A>A | |
| [2024-04-29 13:22:24,104] {utils.py:315} DEBUG - 2024-04-29 13:22:24 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 17:g.35766564A>A;Error from VEP for: 17:g.35766564A>A | |
| [2024-04-29 13:22:24,880] {utils.py:315} DEBUG - 2024-04-29 13:22:24 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 17:g.36091625G>G;Error from VEP for: 17:g.36091625G>G | |
| [2024-04-29 13:22:24,880] {utils.py:315} DEBUG - 2024-04-29 13:22:24 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 17:g.36104911G>G;Error from VEP for: 17:g.36104911G>G | |
| [2024-04-29 13:22:24,880] {utils.py:315} DEBUG - 2024-04-29 13:22:24 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 17:g.36865780G>G;Error from VEP for: 17:g.36865780G>G | |
| [2024-04-29 13:22:24,880] {utils.py:315} DEBUG - 2024-04-29 13:22:24 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 17:g.36871867_36871869delinsCTC;Error from VEP for: 17:g.36871867_36871869delinsCTC | |
| [2024-04-29 13:22:24,880] {utils.py:315} DEBUG - 2024-04-29 13:22:24 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 17:g.36872036_36872038delinsTCC;Error from VEP for: 17:g.36872036_36872038delinsTCC | |
| [2024-04-29 13:22:24,880] {utils.py:315} DEBUG - 2024-04-29 13:22:24 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 17:g.36872086_36872087delinsGT;Error from VEP for: 17:g.36872086_36872087delinsGT | |
| [2024-04-29 13:22:24,880] {utils.py:315} DEBUG - 2024-04-29 13:22:24 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 17:g.36872704C>C;Error from VEP for: 17:g.36872704C>C | |
| [2024-04-29 13:22:24,880] {utils.py:315} DEBUG - 2024-04-29 13:22:24 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 17:g.36881107_36881112delinsGCCGCA;Error from VEP for: 17:g.36881107_36881112delinsGCCGCA | |
| [2024-04-29 13:22:24,880] {utils.py:315} DEBUG - 2024-04-29 13:22:24 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 17:g.36881841A>A;Error from VEP for: 17:g.36881841A>A | |
| [2024-04-29 13:22:24,880] {utils.py:315} DEBUG - 2024-04-29 13:22:24 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 17:g.36881863C>C;Error from VEP for: 17:g.36881863C>C | |
| [2024-04-29 13:22:24,880] {utils.py:315} DEBUG - 2024-04-29 13:22:24 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 17:g.36881873C>C;Error from VEP for: 17:g.36881873C>C | |
| [2024-04-29 13:22:24,880] {utils.py:315} DEBUG - 2024-04-29 13:22:24 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 17:g.37371427C>C;Error from VEP for: 17:g.37371427C>C | |
| [2024-04-29 13:22:24,880] {utils.py:315} DEBUG - 2024-04-29 13:22:24 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 17:g.37371466_37371473delinsCCACCTTC;Error from VEP for: 17:g.37371466_37371473delinsCCACCTTC | |
| [2024-04-29 13:22:24,880] {utils.py:315} DEBUG - 2024-04-29 13:22:24 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 17:g.37618904_37618908delinsCACAA;Error from VEP for: 17:g.37618904_37618908delinsCACAA | |
| [2024-04-29 13:22:24,880] {utils.py:315} DEBUG - 2024-04-29 13:22:24 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 17:g.37627292_37627294delinsAAG;Error from VEP for: 17:g.37627292_37627294delinsAAG | |
| [2024-04-29 13:22:24,880] {utils.py:315} DEBUG - 2024-04-29 13:22:24 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 17:g.37814793G>G;Error from VEP for: 17:g.37814793G>G | |
| [2024-04-29 13:22:24,880] {utils.py:315} DEBUG - 2024-04-29 13:22:24 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 17:g.37865585G>G;Error from VEP for: 17:g.37865585G>G | |
| [2024-04-29 13:22:24,880] {utils.py:315} DEBUG - 2024-04-29 13:22:24 [main] INFO org.cbioportal.annotator.internal.GenomeNexusImpl - On record 25500 out of 116708, annotation 21% complete | |
| [2024-04-29 13:22:24,880] {utils.py:315} DEBUG - 2024-04-29 13:22:24 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 17:g.37884371A>A;Error from VEP for: 17:g.37884371A>A | |
| [2024-04-29 13:22:24,880] {utils.py:315} DEBUG - 2024-04-29 13:22:24 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 17:g.38171944C>C;Error from VEP for: 17:g.38171944C>C | |
| [2024-04-29 13:22:25,337] {utils.py:315} DEBUG - 2024-04-29 13:22:24 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 17:g.38171995C>C;Error from VEP for: 17:g.38171995C>C | |
| [2024-04-29 13:22:25,337] {utils.py:315} DEBUG - 2024-04-29 13:22:24 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 17:g.38487425C>C;Error from VEP for: 17:g.38487425C>C | |
| [2024-04-29 13:22:25,337] {utils.py:315} DEBUG - 2024-04-29 13:22:24 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 17:g.38487452_38487455delinsCTGA;Error from VEP for: 17:g.38487452_38487455delinsCTGA | |
| [2024-04-29 13:22:25,337] {utils.py:315} DEBUG - 2024-04-29 13:22:24 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 17:g.38545687G>G;Error from VEP for: 17:g.38545687G>G | |
| [2024-04-29 13:22:25,337] {utils.py:315} DEBUG - 2024-04-29 13:22:24 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 17:g.38546327_38546328delinsGA;Error from VEP for: 17:g.38546327_38546328delinsGA | |
| [2024-04-29 13:22:25,337] {utils.py:315} DEBUG - 2024-04-29 13:22:24 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 17:g.38546381T>T;Error from VEP for: 17:g.38546381T>T | |
| [2024-04-29 13:22:25,337] {utils.py:315} DEBUG - 2024-04-29 13:22:24 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 17:g.38552642T>T;Error from VEP for: 17:g.38552642T>T | |
| [2024-04-29 13:22:25,337] {utils.py:315} DEBUG - 2024-04-29 13:22:24 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 17:g.38552661C>C;Error from VEP for: 17:g.38552661C>C | |
| [2024-04-29 13:22:25,338] {utils.py:315} DEBUG - 2024-04-29 13:22:24 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 17:g.38572285T>T;Error from VEP for: 17:g.38572285T>T | |
| [2024-04-29 13:22:25,338] {utils.py:315} DEBUG - 2024-04-29 13:22:24 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 17:g.40353543_40353544delinsCA;Error from VEP for: 17:g.40353543_40353544delinsCA | |
| [2024-04-29 13:22:25,338] {utils.py:315} DEBUG - 2024-04-29 13:22:24 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 17:g.40362447T>T;Error from VEP for: 17:g.40362447T>T | |
| [2024-04-29 13:22:25,338] {utils.py:315} DEBUG - 2024-04-29 13:22:24 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 17:g.40370236G>G;Error from VEP for: 17:g.40370236G>G | |
| [2024-04-29 13:22:25,338] {utils.py:315} DEBUG - 2024-04-29 13:22:24 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 17:g.40453399C>C;Error from VEP for: 17:g.40453399C>C | |
| [2024-04-29 13:22:25,338] {utils.py:315} DEBUG - 2024-04-29 13:22:24 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 17:g.40462797_40462798delinsTG;Error from VEP for: 17:g.40462797_40462798delinsTG | |
| [2024-04-29 13:22:25,338] {utils.py:315} DEBUG - 2024-04-29 13:22:24 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 17:g.40462797_40462800delinsTGTG;Error from VEP for: 17:g.40462797_40462800delinsTGTG | |
| [2024-04-29 13:22:25,338] {utils.py:315} DEBUG - 2024-04-29 13:22:24 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 17:g.40462797_40462802delinsTGTGTG;Error from VEP for: 17:g.40462797_40462802delinsTGTGTG | |
| [2024-04-29 13:22:25,338] {utils.py:315} DEBUG - 2024-04-29 13:22:24 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 17:g.40475061_40475063delinsCTT;Error from VEP for: 17:g.40475061_40475063delinsCTT | |
| [2024-04-29 13:22:25,338] {utils.py:315} DEBUG - 2024-04-29 13:22:24 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 17:g.40490767T>T;Error from VEP for: 17:g.40490767T>T | |
| [2024-04-29 13:22:25,338] {utils.py:315} DEBUG - 2024-04-29 13:22:24 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 17:g.40936458C>C;Error from VEP for: 17:g.40936458C>C | |
| [2024-04-29 13:22:25,338] {utils.py:315} DEBUG - 2024-04-29 13:22:24 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 17:g.40939870G>G;Error from VEP for: 17:g.40939870G>G | |
| [2024-04-29 13:22:25,338] {utils.py:315} DEBUG - 2024-04-29 13:22:24 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 17:g.40945774G>G;Error from VEP for: 17:g.40945774G>G | |
| [2024-04-29 13:22:25,338] {utils.py:315} DEBUG - 2024-04-29 13:22:24 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 17:g.40945875T>T;Error from VEP for: 17:g.40945875T>T | |
| [2024-04-29 13:22:25,338] {utils.py:315} DEBUG - 2024-04-29 13:22:24 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 17:g.40945875_40945876delinsTT;Error from VEP for: 17:g.40945875_40945876delinsTT | |
| [2024-04-29 13:22:25,338] {utils.py:315} DEBUG - 2024-04-29 13:22:24 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 17:g.40945875_40945877delinsTTT;Error from VEP for: 17:g.40945875_40945877delinsTTT | |
| [2024-04-29 13:22:25,338] {utils.py:315} DEBUG - 2024-04-29 13:22:24 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 17:g.40945875_40945878delinsTTTT;Error from VEP for: 17:g.40945875_40945878delinsTTTT | |
| [2024-04-29 13:22:25,338] {utils.py:315} DEBUG - 2024-04-29 13:22:24 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 17:g.40946443_40946448delinsTAAGAG;Error from VEP for: 17:g.40946443_40946448delinsTAAGAG | |
| [2024-04-29 13:22:25,338] {utils.py:315} DEBUG - 2024-04-29 13:22:24 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 17:g.40946852_40946854delinsTCT;Error from VEP for: 17:g.40946852_40946854delinsTCT | |
| [2024-04-29 13:22:25,338] {utils.py:315} DEBUG - 2024-04-29 13:22:24 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 17:g.40947909G>G;Error from VEP for: 17:g.40947909G>G | |
| [2024-04-29 13:22:25,338] {utils.py:315} DEBUG - 2024-04-29 13:22:24 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 17:g.40948079_40948081delinsGAG;Error from VEP for: 17:g.40948079_40948081delinsGAG | |
| [2024-04-29 13:22:25,338] {utils.py:315} DEBUG - 2024-04-29 13:22:25 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 17:g.41245587T>T;Error from VEP for: 17:g.41245587T>T | |
| [2024-04-29 13:22:26,534] {utils.py:315} DEBUG - 2024-04-29 13:22:25 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 17:g.41607586G>G;Error from VEP for: 17:g.41607586G>G | |
| [2024-04-29 13:22:26,534] {utils.py:315} DEBUG - 2024-04-29 13:22:25 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 17:g.41832905G>G;Error from VEP for: 17:g.41832905G>G | |
| [2024-04-29 13:22:26,534] {utils.py:315} DEBUG - 2024-04-29 13:22:25 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 17:g.43341884C>C;Error from VEP for: 17:g.43341884C>C | |
| [2024-04-29 13:22:26,534] {utils.py:315} DEBUG - 2024-04-29 13:22:26 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 17:g.43364609_43364611delinsTCT;Error from VEP for: 17:g.43364609_43364611delinsTCT | |
| [2024-04-29 13:22:27,588] {utils.py:315} DEBUG - 2024-04-29 13:22:26 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 17:g.47899143T>T;Error from VEP for: 17:g.47899143T>T | |
| [2024-04-29 13:22:27,588] {utils.py:315} DEBUG - 2024-04-29 13:22:26 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 17:g.48172910G>G;Error from VEP for: 17:g.48172910G>G | |
| [2024-04-29 13:22:27,588] {utils.py:315} DEBUG - 2024-04-29 13:22:26 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 17:g.48186724C>C;Error from VEP for: 17:g.48186724C>C | |
| [2024-04-29 13:22:27,588] {utils.py:315} DEBUG - 2024-04-29 13:22:26 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 17:g.48187596_48187597delinsCA;Error from VEP for: 17:g.48187596_48187597delinsCA | |
| [2024-04-29 13:22:27,588] {utils.py:315} DEBUG - 2024-04-29 13:22:26 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 17:g.48262721A>A;Error from VEP for: 17:g.48262721A>A | |
| [2024-04-29 13:22:27,588] {utils.py:315} DEBUG - 2024-04-29 13:22:26 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 17:g.48262775A>A;Error from VEP for: 17:g.48262775A>A | |
| [2024-04-29 13:22:27,588] {utils.py:315} DEBUG - 2024-04-29 13:22:26 [main] INFO org.cbioportal.annotator.internal.GenomeNexusImpl - On record 26000 out of 116708, annotation 22% complete | |
| [2024-04-29 13:22:27,588] {utils.py:315} DEBUG - 2024-04-29 13:22:26 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 17:g.48264275G>G;Error from VEP for: 17:g.48264275G>G | |
| [2024-04-29 13:22:27,588] {utils.py:315} DEBUG - 2024-04-29 13:22:26 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 17:g.48741488T>T;Error from VEP for: 17:g.48741488T>T | |
| [2024-04-29 13:22:27,588] {utils.py:315} DEBUG - 2024-04-29 13:22:26 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 17:g.48745203C>C;Error from VEP for: 17:g.48745203C>C | |
| [2024-04-29 13:22:27,588] {utils.py:315} DEBUG - 2024-04-29 13:22:26 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 17:g.48745322A>A;Error from VEP for: 17:g.48745322A>A | |
| [2024-04-29 13:22:27,588] {utils.py:315} DEBUG - 2024-04-29 13:22:27 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 17:g.53345077T>T;Error from VEP for: 17:g.53345077T>T | |
| [2024-04-29 13:22:28,279] {utils.py:315} DEBUG - 2024-04-29 13:22:27 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 17:g.53345288C>C;Error from VEP for: 17:g.53345288C>C | |
| [2024-04-29 13:22:28,279] {utils.py:315} DEBUG - 2024-04-29 13:22:27 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 17:g.55709380A>A;Error from VEP for: 17:g.55709380A>A | |
| [2024-04-29 13:22:28,279] {utils.py:315} DEBUG - 2024-04-29 13:22:27 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 17:g.56634351C>C;Error from VEP for: 17:g.56634351C>C | |
| [2024-04-29 13:22:28,279] {utils.py:315} DEBUG - 2024-04-29 13:22:27 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 17:g.56642230_56642231delinsCT;Error from VEP for: 17:g.56642230_56642231delinsCT | |
| [2024-04-29 13:22:28,279] {utils.py:315} DEBUG - 2024-04-29 13:22:27 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 17:g.56649371_56649374delinsCAGA;Error from VEP for: 17:g.56649371_56649374delinsCAGA | |
| [2024-04-29 13:22:28,279] {utils.py:315} DEBUG - 2024-04-29 13:22:27 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 17:g.56663316G>G;Error from VEP for: 17:g.56663316G>G | |
| [2024-04-29 13:22:28,279] {utils.py:315} DEBUG - 2024-04-29 13:22:27 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 17:g.56676292C>C;Error from VEP for: 17:g.56676292C>C | |
| [2024-04-29 13:22:28,279] {utils.py:315} DEBUG - 2024-04-29 13:22:27 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 17:g.57060352A>A;Error from VEP for: 17:g.57060352A>A | |
| [2024-04-29 13:22:28,280] {utils.py:315} DEBUG - 2024-04-29 13:22:27 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 17:g.57060352_57060353delinsAA;Error from VEP for: 17:g.57060352_57060353delinsAA | |
| [2024-04-29 13:22:28,280] {utils.py:315} DEBUG - 2024-04-29 13:22:27 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 17:g.57060464A>A;Error from VEP for: 17:g.57060464A>A | |
| [2024-04-29 13:22:28,280] {utils.py:315} DEBUG - 2024-04-29 13:22:27 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 17:g.57093049A>A;Error from VEP for: 17:g.57093049A>A | |
| [2024-04-29 13:22:28,280] {utils.py:315} DEBUG - 2024-04-29 13:22:27 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 17:g.57126678T>T;Error from VEP for: 17:g.57126678T>T | |
| [2024-04-29 13:22:28,280] {utils.py:315} DEBUG - 2024-04-29 13:22:27 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 17:g.57140004A>A;Error from VEP for: 17:g.57140004A>A | |
| [2024-04-29 13:22:28,280] {utils.py:315} DEBUG - 2024-04-29 13:22:27 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 17:g.57183842_57183848delinsGGCCGCT;Error from VEP for: 17:g.57183842_57183848delinsGGCCGCT | |
| [2024-04-29 13:22:28,280] {utils.py:315} DEBUG - 2024-04-29 13:22:27 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 17:g.57738871_57738873delinsCTC;Error from VEP for: 17:g.57738871_57738873delinsCTC | |
| [2024-04-29 13:22:28,280] {utils.py:315} DEBUG - 2024-04-29 13:22:27 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 17:g.57746241_57746244delinsAGAA;Error from VEP for: 17:g.57746241_57746244delinsAGAA | |
| [2024-04-29 13:22:28,280] {utils.py:315} DEBUG - 2024-04-29 13:22:27 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 17:g.57768031_57768033delinsAAG;Error from VEP for: 17:g.57768031_57768033delinsAAG | |
| [2024-04-29 13:22:28,280] {utils.py:315} DEBUG - 2024-04-29 13:22:27 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 17:g.59760492A>A;Error from VEP for: 17:g.59760492A>A | |
| [2024-04-29 13:22:28,280] {utils.py:315} DEBUG - 2024-04-29 13:22:27 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 17:g.59763496T>T;Error from VEP for: 17:g.59763496T>T | |
| [2024-04-29 13:22:28,280] {utils.py:315} DEBUG - 2024-04-29 13:22:27 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 17:g.59878817A>A;Error from VEP for: 17:g.59878817A>A | |
| [2024-04-29 13:22:28,280] {utils.py:315} DEBUG - 2024-04-29 13:22:28 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 17:g.61994641A>A;Error from VEP for: 17:g.61994641A>A | |
| [2024-04-29 13:22:29,356] {utils.py:315} DEBUG - 2024-04-29 13:22:28 [main] INFO org.cbioportal.annotator.internal.GenomeNexusImpl - On record 26500 out of 116708, annotation 22% complete | |
| [2024-04-29 13:22:29,356] {utils.py:315} DEBUG - 2024-04-29 13:22:28 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 17:g.62541835A>A;Error from VEP for: 17:g.62541835A>A | |
| [2024-04-29 13:22:29,356] {utils.py:315} DEBUG - 2024-04-29 13:22:28 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 17:g.62541844_62541855delinsAAAAAAAAGGGG;Error from VEP for: 17:g.62541844_62541855delinsAAAAAAAAGGGG | |
| [2024-04-29 13:22:29,356] {utils.py:315} DEBUG - 2024-04-29 13:22:28 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 17:g.62541845_62541855delinsAAAAAAAGGGG;Error from VEP for: 17:g.62541845_62541855delinsAAAAAAAGGGG | |
| [2024-04-29 13:22:29,356] {utils.py:315} DEBUG - 2024-04-29 13:22:28 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 17:g.62541846_62541855delinsAAAAAAGGGG;Error from VEP for: 17:g.62541846_62541855delinsAAAAAAGGGG | |
| [2024-04-29 13:22:29,356] {utils.py:315} DEBUG - 2024-04-29 13:22:28 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 17:g.62541847_62541854delinsAAAAAGGG;Error from VEP for: 17:g.62541847_62541854delinsAAAAAGGG | |
| [2024-04-29 13:22:29,356] {utils.py:315} DEBUG - 2024-04-29 13:22:28 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 17:g.62541847_62541855delinsAAAAAGGGG;Error from VEP for: 17:g.62541847_62541855delinsAAAAAGGGG | |
| [2024-04-29 13:22:29,356] {utils.py:315} DEBUG - 2024-04-29 13:22:28 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 17:g.62541847_62541856delinsAAAAAGGGGG;Error from VEP for: 17:g.62541847_62541856delinsAAAAAGGGGG | |
| [2024-04-29 13:22:29,356] {utils.py:315} DEBUG - 2024-04-29 13:22:28 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 17:g.62541848_62541854delinsAAAAGGG;Error from VEP for: 17:g.62541848_62541854delinsAAAAGGG | |
| [2024-04-29 13:22:29,356] {utils.py:315} DEBUG - 2024-04-29 13:22:28 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 17:g.62541848_62541855delinsAAAAGGGG;Error from VEP for: 17:g.62541848_62541855delinsAAAAGGGG | |
| [2024-04-29 13:22:29,357] {utils.py:315} DEBUG - 2024-04-29 13:22:28 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 17:g.62541849_62541854delinsAAAGGG;Error from VEP for: 17:g.62541849_62541854delinsAAAGGG | |
| [2024-04-29 13:22:29,357] {utils.py:315} DEBUG - 2024-04-29 13:22:28 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 17:g.62541849_62541855delinsAAAGGGG;Error from VEP for: 17:g.62541849_62541855delinsAAAGGGG | |
| [2024-04-29 13:22:29,357] {utils.py:315} DEBUG - 2024-04-29 13:22:28 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 17:g.62541850_62541852delinsAAG;Error from VEP for: 17:g.62541850_62541852delinsAAG | |
| [2024-04-29 13:22:29,357] {utils.py:315} DEBUG - 2024-04-29 13:22:28 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 17:g.62541850_62541854delinsAAGGG;Error from VEP for: 17:g.62541850_62541854delinsAAGGG | |
| [2024-04-29 13:22:29,357] {utils.py:315} DEBUG - 2024-04-29 13:22:28 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 17:g.62541851_62541852delinsAG;Error from VEP for: 17:g.62541851_62541852delinsAG | |
| [2024-04-29 13:22:29,357] {utils.py:315} DEBUG - 2024-04-29 13:22:28 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 17:g.62541851_62541853delinsAGG;Error from VEP for: 17:g.62541851_62541853delinsAGG | |
| [2024-04-29 13:22:29,357] {utils.py:315} DEBUG - 2024-04-29 13:22:28 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 17:g.62541852G>G;Error from VEP for: 17:g.62541852G>G | |
| [2024-04-29 13:22:29,357] {utils.py:315} DEBUG - 2024-04-29 13:22:28 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 17:g.62541852_62541853delinsGG;Error from VEP for: 17:g.62541852_62541853delinsGG | |
| [2024-04-29 13:22:29,357] {utils.py:315} DEBUG - 2024-04-29 13:22:28 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 17:g.62541852_62541854delinsGGG;Error from VEP for: 17:g.62541852_62541854delinsGGG | |
| [2024-04-29 13:22:29,357] {utils.py:315} DEBUG - 2024-04-29 13:22:28 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 17:g.62541865A>A;Error from VEP for: 17:g.62541865A>A | |
| [2024-04-29 13:22:29,357] {utils.py:315} DEBUG - 2024-04-29 13:22:28 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 17:g.62589571G>G;Error from VEP for: 17:g.62589571G>G | |
| [2024-04-29 13:22:29,357] {utils.py:315} DEBUG - 2024-04-29 13:22:28 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 17:g.63532555_63532566delinsCGGGGGGTGGTG;Error from VEP for: 17:g.63532555_63532566delinsCGGGGGGTGGTG | |
| [2024-04-29 13:22:29,357] {utils.py:315} DEBUG - 2024-04-29 13:22:28 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 17:g.63532556G>G;Error from VEP for: 17:g.63532556G>G | |
| [2024-04-29 13:22:29,357] {utils.py:315} DEBUG - 2024-04-29 13:22:28 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 17:g.63532585C>C;Error from VEP for: 17:g.63532585C>C | |
| [2024-04-29 13:22:29,357] {utils.py:315} DEBUG - 2024-04-29 13:22:28 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 17:g.63533517C>C;Error from VEP for: 17:g.63533517C>C | |
| [2024-04-29 13:22:29,357] {utils.py:315} DEBUG - 2024-04-29 13:22:29 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 17:g.64731780G>G;Error from VEP for: 17:g.64731780G>G | |
| [2024-04-29 13:22:30,270] {utils.py:315} DEBUG - 2024-04-29 13:22:29 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 17:g.64785051A>A;Error from VEP for: 17:g.64785051A>A | |
| [2024-04-29 13:22:30,270] {utils.py:315} DEBUG - 2024-04-29 13:22:29 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 17:g.64800215A>A;Error from VEP for: 17:g.64800215A>A | |
| [2024-04-29 13:22:30,270] {utils.py:315} DEBUG - 2024-04-29 13:22:29 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 17:g.66246316T>T;Error from VEP for: 17:g.66246316T>T | |
| [2024-04-29 13:22:30,270] {utils.py:315} DEBUG - 2024-04-29 13:22:29 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 17:g.66252960_66252964delinsGGTGA;Error from VEP for: 17:g.66252960_66252964delinsGGTGA | |
| [2024-04-29 13:22:30,270] {utils.py:315} DEBUG - 2024-04-29 13:22:29 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 17:g.66524034_66524038delinsTATTT;Error from VEP for: 17:g.66524034_66524038delinsTATTT | |
| [2024-04-29 13:22:30,270] {utils.py:315} DEBUG - 2024-04-29 13:22:29 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 17:g.67516289C>C;Error from VEP for: 17:g.67516289C>C | |
| [2024-04-29 13:22:30,270] {utils.py:315} DEBUG - 2024-04-29 13:22:29 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 17:g.67516341T>T;Error from VEP for: 17:g.67516341T>T | |
| [2024-04-29 13:22:30,270] {utils.py:315} DEBUG - 2024-04-29 13:22:29 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 17:g.67516341_67516342delinsTT;Error from VEP for: 17:g.67516341_67516342delinsTT | |
| [2024-04-29 13:22:30,270] {utils.py:315} DEBUG - 2024-04-29 13:22:29 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 17:g.67517411T>T;Error from VEP for: 17:g.67517411T>T | |
| [2024-04-29 13:22:30,270] {utils.py:315} DEBUG - 2024-04-29 13:22:29 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 17:g.73316467G>G;Error from VEP for: 17:g.73316467G>G | |
| [2024-04-29 13:22:30,270] {utils.py:315} DEBUG - 2024-04-29 13:22:29 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 17:g.73732904C>C;Error from VEP for: 17:g.73732904C>C | |
| [2024-04-29 13:22:30,270] {utils.py:315} DEBUG - 2024-04-29 13:22:29 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 17:g.73738669G>G;Error from VEP for: 17:g.73738669G>G | |
| [2024-04-29 13:22:30,270] {utils.py:315} DEBUG - 2024-04-29 13:22:29 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 17:g.73746261C>C;Error from VEP for: 17:g.73746261C>C | |
| [2024-04-29 13:22:30,270] {utils.py:315} DEBUG - 2024-04-29 13:22:29 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 17:g.73751196C>C;Error from VEP for: 17:g.73751196C>C | |
| [2024-04-29 13:22:30,270] {utils.py:315} DEBUG - 2024-04-29 13:22:29 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 17:g.73751239C>C;Error from VEP for: 17:g.73751239C>C | |
| [2024-04-29 13:22:30,270] {utils.py:315} DEBUG - 2024-04-29 13:22:29 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 17:g.73753723C>C;Error from VEP for: 17:g.73753723C>C | |
| [2024-04-29 13:22:30,270] {utils.py:315} DEBUG - 2024-04-29 13:22:29 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 17:g.73997602_73997604delinsGAA;Error from VEP for: 17:g.73997602_73997604delinsGAA | |
| [2024-04-29 13:22:30,270] {utils.py:315} DEBUG - 2024-04-29 13:22:29 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 17:g.74392200C>C;Error from VEP for: 17:g.74392200C>C | |
| [2024-04-29 13:22:30,270] {utils.py:315} DEBUG - 2024-04-29 13:22:29 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 17:g.74392741G>G;Error from VEP for: 17:g.74392741G>G | |
| [2024-04-29 13:22:30,271] {utils.py:315} DEBUG - 2024-04-29 13:22:29 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 17:g.74395563_74395565delinsTTC;Error from VEP for: 17:g.74395563_74395565delinsTTC | |
| [2024-04-29 13:22:30,271] {utils.py:315} DEBUG - 2024-04-29 13:22:29 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 17:g.74397224_74397226delinsGAA;Error from VEP for: 17:g.74397224_74397226delinsGAA | |
| [2024-04-29 13:22:30,271] {utils.py:315} DEBUG - 2024-04-29 13:22:29 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 17:g.75471864_75471865delinsAG;Error from VEP for: 17:g.75471864_75471865delinsAG | |
| [2024-04-29 13:22:30,271] {utils.py:315} DEBUG - 2024-04-29 13:22:29 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 17:g.75488715_75488717delinsCTG;Error from VEP for: 17:g.75488715_75488717delinsCTG | |
| [2024-04-29 13:22:30,271] {utils.py:315} DEBUG - 2024-04-29 13:22:30 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 17:g.76219856_76219857delinsTC;Error from VEP for: 17:g.76219856_76219857delinsTC | |
| [2024-04-29 13:22:32,121] {utils.py:315} DEBUG - 2024-04-29 13:22:30 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 17:g.76354878C>C;Error from VEP for: 17:g.76354878C>C | |
| [2024-04-29 13:22:32,121] {utils.py:315} DEBUG - 2024-04-29 13:22:30 [main] INFO org.cbioportal.annotator.internal.GenomeNexusImpl - On record 27000 out of 116708, annotation 23% complete | |
| [2024-04-29 13:22:32,121] {utils.py:315} DEBUG - 2024-04-29 13:22:30 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 17:g.78172264G>G;Error from VEP for: 17:g.78172264G>G | |
| [2024-04-29 13:22:32,121] {utils.py:315} DEBUG - 2024-04-29 13:22:30 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 17:g.78182309_78182312delinsCACA;Error from VEP for: 17:g.78182309_78182312delinsCACA | |
| [2024-04-29 13:22:32,121] {utils.py:315} DEBUG - 2024-04-29 13:22:30 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 17:g.78519274_78519275delinsTT;Error from VEP for: 17:g.78519274_78519275delinsTT | |
| [2024-04-29 13:22:32,121] {utils.py:315} DEBUG - 2024-04-29 13:22:30 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 17:g.78854262G>G;Error from VEP for: 17:g.78854262G>G | |
| [2024-04-29 13:22:32,121] {utils.py:315} DEBUG - 2024-04-29 13:22:30 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 17:g.78938194G>G;Error from VEP for: 17:g.78938194G>G | |
| [2024-04-29 13:22:32,121] {utils.py:315} DEBUG - 2024-04-29 13:22:30 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 17:g.79094046_79094048delinsCTT;Error from VEP for: 17:g.79094046_79094048delinsCTT | |
| [2024-04-29 13:22:32,121] {utils.py:315} DEBUG - 2024-04-29 13:22:30 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 17:g.79095015_79095023delinsGTCCAGGGA;Error from VEP for: 17:g.79095015_79095023delinsGTCCAGGGA | |
| [2024-04-29 13:22:32,121] {utils.py:315} DEBUG - 2024-04-29 13:22:30 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 17:g.79096509_79096511delinsCTC;Error from VEP for: 17:g.79096509_79096511delinsCTC | |
| [2024-04-29 13:22:32,121] {utils.py:315} DEBUG - 2024-04-29 13:22:30 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 17:g.79803088C>C;Error from VEP for: 17:g.79803088C>C | |
| [2024-04-29 13:22:32,121] {utils.py:315} DEBUG - 2024-04-29 13:22:30 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 17:g.79803764T>T;Error from VEP for: 17:g.79803764T>T | |
| [2024-04-29 13:22:32,121] {utils.py:315} DEBUG - 2024-04-29 13:22:30 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 17:g.79943427_79943428delinsCT;Error from VEP for: 17:g.79943427_79943428delinsCT | |
| [2024-04-29 13:22:32,121] {utils.py:315} DEBUG - 2024-04-29 13:22:30 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 17:g.79954508C>C;Error from VEP for: 17:g.79954508C>C | |
| [2024-04-29 13:22:32,121] {utils.py:315} DEBUG - 2024-04-29 13:22:30 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 17:g.80043423G>G;Error from VEP for: 17:g.80043423G>G | |
| [2024-04-29 13:22:32,121] {utils.py:315} DEBUG - 2024-04-29 13:22:30 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 17:g.80051614_80051615delinsGT;Error from VEP for: 17:g.80051614_80051615delinsGT | |
| [2024-04-29 13:22:32,121] {utils.py:315} DEBUG - 2024-04-29 13:22:30 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 17:g.80206876G>G;Error from VEP for: 17:g.80206876G>G | |
| [2024-04-29 13:22:32,121] {utils.py:315} DEBUG - 2024-04-29 13:22:30 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 18:g.724268A>A;Error from VEP for: 18:g.724268A>A | |
| [2024-04-29 13:22:32,121] {utils.py:315} DEBUG - 2024-04-29 13:22:30 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 18:g.724333_724335delinsAAG;Error from VEP for: 18:g.724333_724335delinsAAG | |
| [2024-04-29 13:22:32,121] {utils.py:315} DEBUG - 2024-04-29 13:22:30 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 18:g.745962_745963delinsCT;Error from VEP for: 18:g.745962_745963delinsCT | |
| [2024-04-29 13:22:32,121] {utils.py:315} DEBUG - 2024-04-29 13:22:30 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 18:g.6993723T>T;Error from VEP for: 18:g.6993723T>T | |
| [2024-04-29 13:22:32,121] {utils.py:315} DEBUG - 2024-04-29 13:22:32 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 18:g.7013879C>C;Error from VEP for: 18:g.7013879C>C | |
| [2024-04-29 13:22:32,931] {utils.py:315} DEBUG - 2024-04-29 13:22:32 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 18:g.7014041A>A;Error from VEP for: 18:g.7014041A>A | |
| [2024-04-29 13:22:32,932] {utils.py:315} DEBUG - 2024-04-29 13:22:32 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 18:g.7034575T>T;Error from VEP for: 18:g.7034575T>T | |
| [2024-04-29 13:22:32,932] {utils.py:315} DEBUG - 2024-04-29 13:22:32 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 18:g.7038885T>T;Error from VEP for: 18:g.7038885T>T | |
| [2024-04-29 13:22:32,932] {utils.py:315} DEBUG - 2024-04-29 13:22:32 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 18:g.7042192G>G;Error from VEP for: 18:g.7042192G>G | |
| [2024-04-29 13:22:32,932] {utils.py:315} DEBUG - 2024-04-29 13:22:32 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 18:g.8784105C>C;Error from VEP for: 18:g.8784105C>C | |
| [2024-04-29 13:22:32,932] {utils.py:315} DEBUG - 2024-04-29 13:22:32 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 18:g.8793004C>C;Error from VEP for: 18:g.8793004C>C | |
| [2024-04-29 13:22:32,932] {utils.py:315} DEBUG - 2024-04-29 13:22:32 [main] INFO org.cbioportal.annotator.internal.GenomeNexusImpl - On record 27500 out of 116708, annotation 23% complete | |
| [2024-04-29 13:22:32,932] {utils.py:315} DEBUG - 2024-04-29 13:22:32 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 18:g.18533679T>T;Error from VEP for: 18:g.18533679T>T | |
| [2024-04-29 13:22:32,932] {utils.py:315} DEBUG - 2024-04-29 13:22:32 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 18:g.18539865T>T;Error from VEP for: 18:g.18539865T>T | |
| [2024-04-29 13:22:32,932] {utils.py:315} DEBUG - 2024-04-29 13:22:32 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 18:g.18547866T>T;Error from VEP for: 18:g.18547866T>T | |
| [2024-04-29 13:22:32,933] {utils.py:315} DEBUG - 2024-04-29 13:22:32 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 18:g.18588126_18588127delinsTG;Error from VEP for: 18:g.18588126_18588127delinsTG | |
| [2024-04-29 13:22:32,933] {utils.py:315} DEBUG - 2024-04-29 13:22:32 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 18:g.20555182_20555185delinsAGTA;Error from VEP for: 18:g.20555182_20555185delinsAGTA | |
| [2024-04-29 13:22:32,933] {utils.py:315} DEBUG - 2024-04-29 13:22:32 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 18:g.20572853A>A;Error from VEP for: 18:g.20572853A>A | |
| [2024-04-29 13:22:32,933] {utils.py:315} DEBUG - 2024-04-29 13:22:32 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 18:g.20573182T>T;Error from VEP for: 18:g.20573182T>T | |
| [2024-04-29 13:22:32,933] {utils.py:315} DEBUG - 2024-04-29 13:22:32 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 18:g.20606214_20606215delinsAG;Error from VEP for: 18:g.20606214_20606215delinsAG | |
| [2024-04-29 13:22:32,933] {utils.py:315} DEBUG - 2024-04-29 13:22:32 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 18:g.21059376T>T;Error from VEP for: 18:g.21059376T>T | |
| [2024-04-29 13:22:32,933] {utils.py:315} DEBUG - 2024-04-29 13:22:32 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 18:g.22805205C>C;Error from VEP for: 18:g.22805205C>C | |
| [2024-04-29 13:22:32,933] {utils.py:315} DEBUG - 2024-04-29 13:22:32 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 18:g.23615012_23615014delinsCTG;Error from VEP for: 18:g.23615012_23615014delinsCTG | |
| [2024-04-29 13:22:32,933] {utils.py:315} DEBUG - 2024-04-29 13:22:32 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 18:g.23637654G>G;Error from VEP for: 18:g.23637654G>G | |
| [2024-04-29 13:22:32,933] {utils.py:315} DEBUG - 2024-04-29 13:22:32 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 18:g.23670594_23670595delinsGA;Error from VEP for: 18:g.23670594_23670595delinsGA | |
| [2024-04-29 13:22:32,933] {utils.py:315} DEBUG - 2024-04-29 13:22:32 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 18:g.25572683G>G;Error from VEP for: 18:g.25572683G>G | |
| [2024-04-29 13:22:32,933] {utils.py:315} DEBUG - 2024-04-29 13:22:32 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 18:g.39573290C>C;Error from VEP for: 18:g.39573290C>C | |
| [2024-04-29 13:22:33,671] {utils.py:315} DEBUG - 2024-04-29 13:22:32 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 18:g.45372073A>A;Error from VEP for: 18:g.45372073A>A | |
| [2024-04-29 13:22:33,671] {utils.py:315} DEBUG - 2024-04-29 13:22:32 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 18:g.45374949_45374952delinsAGTG;Error from VEP for: 18:g.45374949_45374952delinsAGTG | |
| [2024-04-29 13:22:33,671] {utils.py:315} DEBUG - 2024-04-29 13:22:32 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 18:g.46447624A>A;Error from VEP for: 18:g.46447624A>A | |
| [2024-04-29 13:22:33,671] {utils.py:315} DEBUG - 2024-04-29 13:22:32 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 18:g.46474795G>G;Error from VEP for: 18:g.46474795G>G | |
| [2024-04-29 13:22:33,671] {utils.py:315} DEBUG - 2024-04-29 13:22:32 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 18:g.46474795_46474796delinsGG;Error from VEP for: 18:g.46474795_46474796delinsGG | |
| [2024-04-29 13:22:33,671] {utils.py:315} DEBUG - 2024-04-29 13:22:32 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 18:g.48573339T>T;Error from VEP for: 18:g.48573339T>T | |
| [2024-04-29 13:22:33,671] {utils.py:315} DEBUG - 2024-04-29 13:22:32 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 18:g.48573561_48573569delinsGAGAAAAAA;Error from VEP for: 18:g.48573561_48573569delinsGAGAAAAAA | |
| [2024-04-29 13:22:33,671] {utils.py:315} DEBUG - 2024-04-29 13:22:32 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 18:g.48573605A>A;Error from VEP for: 18:g.48573605A>A | |
| [2024-04-29 13:22:33,671] {utils.py:315} DEBUG - 2024-04-29 13:22:32 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 18:g.48581091T>T;Error from VEP for: 18:g.48581091T>T | |
| [2024-04-29 13:22:33,671] {utils.py:315} DEBUG - 2024-04-29 13:22:32 [main] INFO org.cbioportal.annotator.internal.GenomeNexusImpl - On record 28000 out of 116708, annotation 23% complete | |
| [2024-04-29 13:22:33,671] {utils.py:315} DEBUG - 2024-04-29 13:22:32 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 18:g.48584514G>G;Error from VEP for: 18:g.48584514G>G | |
| [2024-04-29 13:22:33,671] {utils.py:315} DEBUG - 2024-04-29 13:22:32 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 18:g.48584575_48584587delinsCAGAATGGATTTA;Error from VEP for: 18:g.48584575_48584587delinsCAGAATGGATTTA | |
| [2024-04-29 13:22:33,671] {utils.py:315} DEBUG - 2024-04-29 13:22:32 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 18:g.48593491_48593494delinsAGAC;Error from VEP for: 18:g.48593491_48593494delinsAGAC | |
| [2024-04-29 13:22:33,672] {utils.py:315} DEBUG - 2024-04-29 13:22:32 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 18:g.48604793_48604806delinsGTACTTCATACCAT;Error from VEP for: 18:g.48604793_48604806delinsGTACTTCATACCAT | |
| [2024-04-29 13:22:33,672] {utils.py:315} DEBUG - 2024-04-29 13:22:32 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 18:g.48605008T>T;Error from VEP for: 18:g.48605008T>T | |
| [2024-04-29 13:22:33,672] {utils.py:315} DEBUG - 2024-04-29 13:22:32 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 18:g.55328515_55328517delinsGCA;Error from VEP for: 18:g.55328515_55328517delinsGCA | |
| [2024-04-29 13:22:33,672] {utils.py:315} DEBUG - 2024-04-29 13:22:32 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 18:g.55328620_55328622delinsTTC;Error from VEP for: 18:g.55328620_55328622delinsTTC | |
| [2024-04-29 13:22:33,672] {utils.py:315} DEBUG - 2024-04-29 13:22:32 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 18:g.55329760A>A;Error from VEP for: 18:g.55329760A>A | |
| [2024-04-29 13:22:33,672] {utils.py:315} DEBUG - 2024-04-29 13:22:32 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 18:g.55351290_55351291delinsTG;Error from VEP for: 18:g.55351290_55351291delinsTG | |
| [2024-04-29 13:22:33,672] {utils.py:315} DEBUG - 2024-04-29 13:22:32 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 18:g.55351309_55351311delinsAAG;Error from VEP for: 18:g.55351309_55351311delinsAAG | |
| [2024-04-29 13:22:33,672] {utils.py:315} DEBUG - 2024-04-29 13:22:32 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 18:g.55355557T>T;Error from VEP for: 18:g.55355557T>T | |
| [2024-04-29 13:22:33,672] {utils.py:315} DEBUG - 2024-04-29 13:22:32 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 18:g.55365040T>T;Error from VEP for: 18:g.55365040T>T | |
| [2024-04-29 13:22:33,672] {utils.py:315} DEBUG - 2024-04-29 13:22:32 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 18:g.56196451C>C;Error from VEP for: 18:g.56196451C>C | |
| [2024-04-29 13:22:33,672] {utils.py:315} DEBUG - 2024-04-29 13:22:32 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 18:g.56202710T>T;Error from VEP for: 18:g.56202710T>T | |
| [2024-04-29 13:22:33,672] {utils.py:315} DEBUG - 2024-04-29 13:22:32 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 18:g.56203253_56203255delinsAAG;Error from VEP for: 18:g.56203253_56203255delinsAAG | |
| [2024-04-29 13:22:33,672] {utils.py:315} DEBUG - 2024-04-29 13:22:32 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 18:g.56204388_56204402delinsCAGTTGATGTGTCCT;Error from VEP for: 18:g.56204388_56204402delinsCAGTTGATGTGTCCT | |
| [2024-04-29 13:22:33,672] {utils.py:315} DEBUG - 2024-04-29 13:22:33 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 18:g.56204388_56204402delinsCAGTTGATGTGTCCT;Error from VEP for: 18:g.56204388_56204402delinsCAGTTGATGTGTCCT | |
| [2024-04-29 13:22:35,339] {utils.py:315} DEBUG - 2024-04-29 13:22:33 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 18:g.56246440T>T;Error from VEP for: 18:g.56246440T>T | |
| [2024-04-29 13:22:35,339] {utils.py:315} DEBUG - 2024-04-29 13:22:33 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 18:g.56246941A>A;Error from VEP for: 18:g.56246941A>A | |
| [2024-04-29 13:22:35,339] {utils.py:315} DEBUG - 2024-04-29 13:22:33 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 18:g.56376774A>A;Error from VEP for: 18:g.56376774A>A | |
| [2024-04-29 13:22:35,339] {utils.py:315} DEBUG - 2024-04-29 13:22:33 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 18:g.60985201T>T;Error from VEP for: 18:g.60985201T>T | |
| [2024-04-29 13:22:35,339] {utils.py:315} DEBUG - 2024-04-29 13:22:33 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 18:g.61306960G>G;Error from VEP for: 18:g.61306960G>G | |
| [2024-04-29 13:22:35,339] {utils.py:315} DEBUG - 2024-04-29 13:22:33 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 18:g.77211010_77211011delinsGA;Error from VEP for: 18:g.77211010_77211011delinsGA | |
| [2024-04-29 13:22:35,339] {utils.py:315} DEBUG - 2024-04-29 13:22:33 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 18:g.77227747A>A;Error from VEP for: 18:g.77227747A>A | |
| [2024-04-29 13:22:35,339] {utils.py:315} DEBUG - 2024-04-29 13:22:33 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 18:g.77287653_77287654delinsAA;Error from VEP for: 18:g.77287653_77287654delinsAA | |
| [2024-04-29 13:22:35,339] {utils.py:315} DEBUG - 2024-04-29 13:22:35 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 18:g.77287653_77287654delinsAA;Error from VEP for: 18:g.77287653_77287654delinsAA | |
| [2024-04-29 13:22:37,482] {utils.py:315} DEBUG - 2024-04-29 13:22:35 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 19:g.1221314C>C;Error from VEP for: 19:g.1221314C>C | |
| [2024-04-29 13:22:37,482] {utils.py:315} DEBUG - 2024-04-29 13:22:35 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 19:g.1615487G>G;Error from VEP for: 19:g.1615487G>G | |
| [2024-04-29 13:22:37,482] {utils.py:315} DEBUG - 2024-04-29 13:22:35 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 19:g.1980360_1980361delinsCA;Error from VEP for: 19:g.1980360_1980361delinsCA | |
| [2024-04-29 13:22:37,482] {utils.py:315} DEBUG - 2024-04-29 13:22:35 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 19:g.3653520C>C;Error from VEP for: 19:g.3653520C>C | |
| [2024-04-29 13:22:37,482] {utils.py:315} DEBUG - 2024-04-29 13:22:35 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 19:g.3661060G>G;Error from VEP for: 19:g.3661060G>G | |
| [2024-04-29 13:22:37,482] {utils.py:315} DEBUG - 2024-04-29 13:22:35 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 19:g.6213976G>G;Error from VEP for: 19:g.6213976G>G | |
| [2024-04-29 13:22:37,482] {utils.py:315} DEBUG - 2024-04-29 13:22:35 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 19:g.6222335_6222337delinsTCT;Error from VEP for: 19:g.6222335_6222337delinsTCT | |
| [2024-04-29 13:22:37,482] {utils.py:315} DEBUG - 2024-04-29 13:22:35 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 19:g.6825352G>G;Error from VEP for: 19:g.6825352G>G | |
| [2024-04-29 13:22:37,482] {utils.py:315} DEBUG - 2024-04-29 13:22:35 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 19:g.6832176_6832178delinsGAA;Error from VEP for: 19:g.6832176_6832178delinsGAA | |
| [2024-04-29 13:22:37,482] {utils.py:315} DEBUG - 2024-04-29 13:22:35 [main] INFO org.cbioportal.annotator.internal.GenomeNexusImpl - On record 28500 out of 116708, annotation 24% complete | |
| [2024-04-29 13:22:37,482] {utils.py:315} DEBUG - 2024-04-29 13:22:35 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 19:g.7117126_7117127delinsTG;Error from VEP for: 19:g.7117126_7117127delinsTG | |
| [2024-04-29 13:22:37,482] {utils.py:315} DEBUG - 2024-04-29 13:22:35 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 19:g.7152596C>C;Error from VEP for: 19:g.7152596C>C | |
| [2024-04-29 13:22:37,482] {utils.py:315} DEBUG - 2024-04-29 13:22:35 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 19:g.7168023G>G;Error from VEP for: 19:g.7168023G>G | |
| [2024-04-29 13:22:37,482] {utils.py:315} DEBUG - 2024-04-29 13:22:35 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 19:g.7976149C>C;Error from VEP for: 19:g.7976149C>C | |
| [2024-04-29 13:22:37,482] {utils.py:315} DEBUG - 2024-04-29 13:22:35 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 19:g.7976202T>T;Error from VEP for: 19:g.7976202T>T | |
| [2024-04-29 13:22:37,482] {utils.py:315} DEBUG - 2024-04-29 13:22:35 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 19:g.7976434G>G;Error from VEP for: 19:g.7976434G>G | |
| [2024-04-29 13:22:37,482] {utils.py:315} DEBUG - 2024-04-29 13:22:35 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 19:g.7977066_7977068delinsATA;Error from VEP for: 19:g.7977066_7977068delinsATA | |
| [2024-04-29 13:22:37,483] {utils.py:315} DEBUG - 2024-04-29 13:22:35 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 19:g.8028348A>A;Error from VEP for: 19:g.8028348A>A | |
| [2024-04-29 13:22:37,483] {utils.py:315} DEBUG - 2024-04-29 13:22:35 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 19:g.10257106_10257110delinsAGAGG;Error from VEP for: 19:g.10257106_10257110delinsAGAGG | |
| [2024-04-29 13:22:37,483] {utils.py:315} DEBUG - 2024-04-29 13:22:35 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 19:g.10273397T>T;Error from VEP for: 19:g.10273397T>T | |
| [2024-04-29 13:22:37,483] {utils.py:315} DEBUG - 2024-04-29 13:22:35 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 19:g.10463758_10463781delinsTGCAGATAGGCCATGCCCTGGGGA;Error from VEP for: 19:g.10463758_10463781delinsTGCAGATAGGCCATGCCCTGGGGA | |
| [2024-04-29 13:22:37,483] {utils.py:315} DEBUG - 2024-04-29 13:22:35 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 19:g.10468331_10468332delinsTT;Error from VEP for: 19:g.10468331_10468332delinsTT | |
| [2024-04-29 13:22:37,483] {utils.py:315} DEBUG - 2024-04-29 13:22:35 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 19:g.11097625_11097626delinsCC;Error from VEP for: 19:g.11097625_11097626delinsCC | |
| [2024-04-29 13:22:37,483] {utils.py:315} DEBUG - 2024-04-29 13:22:35 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 19:g.11118633_11118635delinsAGA;Error from VEP for: 19:g.11118633_11118635delinsAGA | |
| [2024-04-29 13:22:37,483] {utils.py:315} DEBUG - 2024-04-29 13:22:35 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 19:g.11121117_11121139delinsGCAGTCCTACTATGCCGTGGCCC;Error from VEP for: 19:g.11121117_11121139delinsGCAGTCCTACTATGCCGTGGCCC | |
| [2024-04-29 13:22:37,483] {utils.py:315} DEBUG - 2024-04-29 13:22:35 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 19:g.11129635_11129641delinsCGCTGTC;Error from VEP for: 19:g.11129635_11129641delinsCGCTGTC | |
| [2024-04-29 13:22:37,483] {utils.py:315} DEBUG - 2024-04-29 13:22:35 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 19:g.11129671C>C;Error from VEP for: 19:g.11129671C>C | |
| [2024-04-29 13:22:37,483] {utils.py:315} DEBUG - 2024-04-29 13:22:35 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 19:g.11132442_11132444delinsGAA;Error from VEP for: 19:g.11132442_11132444delinsGAA | |
| [2024-04-29 13:22:37,483] {utils.py:315} DEBUG - 2024-04-29 13:22:37 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 19:g.11138497_11138513delinsCTTGATAGAATTCTTCC;Error from VEP for: 19:g.11138497_11138513delinsCTTGATAGAATTCTTCC | |
| [2024-04-29 13:22:39,108] {utils.py:315} DEBUG - 2024-04-29 13:22:37 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 19:g.11141498G>G;Error from VEP for: 19:g.11141498G>G | |
| [2024-04-29 13:22:39,108] {utils.py:315} DEBUG - 2024-04-29 13:22:37 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 19:g.11144049_11144051delinsGGA;Error from VEP for: 19:g.11144049_11144051delinsGGA | |
| [2024-04-29 13:22:39,108] {utils.py:315} DEBUG - 2024-04-29 13:22:37 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 19:g.11144148_11144149delinsGC;Error from VEP for: 19:g.11144148_11144149delinsGC | |
| [2024-04-29 13:22:39,108] {utils.py:315} DEBUG - 2024-04-29 13:22:37 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 19:g.11144179_11144190delinsGAGGAGCAGGAT;Error from VEP for: 19:g.11144179_11144190delinsGAGGAGCAGGAT | |
| [2024-04-29 13:22:39,108] {utils.py:315} DEBUG - 2024-04-29 13:22:37 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 19:g.11230805T>T;Error from VEP for: 19:g.11230805T>T | |
| [2024-04-29 13:22:39,108] {utils.py:315} DEBUG - 2024-04-29 13:22:37 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 19:g.11527353C>C;Error from VEP for: 19:g.11527353C>C | |
| [2024-04-29 13:22:39,108] {utils.py:315} DEBUG - 2024-04-29 13:22:37 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 19:g.12902925G>G;Error from VEP for: 19:g.12902925G>G | |
| [2024-04-29 13:22:39,108] {utils.py:315} DEBUG - 2024-04-29 13:22:37 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 19:g.12981872C>C;Error from VEP for: 19:g.12981872C>C | |
| [2024-04-29 13:22:39,108] {utils.py:315} DEBUG - 2024-04-29 13:22:37 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 19:g.14203863C>C;Error from VEP for: 19:g.14203863C>C | |
| [2024-04-29 13:22:39,108] {utils.py:315} DEBUG - 2024-04-29 13:22:37 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 19:g.14203874A>A;Error from VEP for: 19:g.14203874A>A | |
| [2024-04-29 13:22:39,108] {utils.py:315} DEBUG - 2024-04-29 13:22:37 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 19:g.14203876_14203882delinsAAAAAAG;Error from VEP for: 19:g.14203876_14203882delinsAAAAAAG | |
| [2024-04-29 13:22:39,108] {utils.py:315} DEBUG - 2024-04-29 13:22:37 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 19:g.14203926A>A;Error from VEP for: 19:g.14203926A>A | |
| [2024-04-29 13:22:39,108] {utils.py:315} DEBUG - 2024-04-29 13:22:37 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 19:g.14218178T>T;Error from VEP for: 19:g.14218178T>T | |
| [2024-04-29 13:22:39,109] {utils.py:315} DEBUG - 2024-04-29 13:22:37 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 19:g.15276861C>C;Error from VEP for: 19:g.15276861C>C | |
| [2024-04-29 13:22:39,109] {utils.py:315} DEBUG - 2024-04-29 13:22:37 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 19:g.15288789G>G;Error from VEP for: 19:g.15288789G>G | |
| [2024-04-29 13:22:39,109] {utils.py:315} DEBUG - 2024-04-29 13:22:37 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 19:g.15289955A>A;Error from VEP for: 19:g.15289955A>A | |
| [2024-04-29 13:22:39,109] {utils.py:315} DEBUG - 2024-04-29 13:22:37 [main] INFO org.cbioportal.annotator.internal.GenomeNexusImpl - On record 29000 out of 116708, annotation 24% complete | |
| [2024-04-29 13:22:39,109] {utils.py:315} DEBUG - 2024-04-29 13:22:37 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 19:g.15290896C>C;Error from VEP for: 19:g.15290896C>C | |
| [2024-04-29 13:22:39,109] {utils.py:315} DEBUG - 2024-04-29 13:22:37 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 19:g.15290919C>C;Error from VEP for: 19:g.15290919C>C | |
| [2024-04-29 13:22:39,109] {utils.py:315} DEBUG - 2024-04-29 13:22:37 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 19:g.15366939T>T;Error from VEP for: 19:g.15366939T>T | |
| [2024-04-29 13:22:39,109] {utils.py:315} DEBUG - 2024-04-29 13:22:37 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 19:g.16199871_16199873delinsGAA;Error from VEP for: 19:g.16199871_16199873delinsGAA | |
| [2024-04-29 13:22:39,109] {utils.py:315} DEBUG - 2024-04-29 13:22:37 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 19:g.17004203C>C;Error from VEP for: 19:g.17004203C>C | |
| [2024-04-29 13:22:39,109] {utils.py:315} DEBUG - 2024-04-29 13:22:37 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 19:g.17006715_17006716delinsCA;Error from VEP for: 19:g.17006715_17006716delinsCA | |
| [2024-04-29 13:22:39,109] {utils.py:315} DEBUG - 2024-04-29 13:22:37 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 19:g.17039884C>C;Error from VEP for: 19:g.17039884C>C | |
| [2024-04-29 13:22:39,109] {utils.py:315} DEBUG - 2024-04-29 13:22:37 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 19:g.17085999A>A;Error from VEP for: 19:g.17085999A>A | |
| [2024-04-29 13:22:39,109] {utils.py:315} DEBUG - 2024-04-29 13:22:37 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 19:g.17091475A>A;Error from VEP for: 19:g.17091475A>A | |
| [2024-04-29 13:22:39,109] {utils.py:315} DEBUG - 2024-04-29 13:22:37 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 19:g.17115106_17115108delinsTTG;Error from VEP for: 19:g.17115106_17115108delinsTTG | |
| [2024-04-29 13:22:39,109] {utils.py:315} DEBUG - 2024-04-29 13:22:37 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 19:g.18235444_18235451delinsGCCCCTAG;Error from VEP for: 19:g.18235444_18235451delinsGCCCCTAG | |
| [2024-04-29 13:22:39,109] {utils.py:315} DEBUG - 2024-04-29 13:22:37 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 19:g.18260077C>C;Error from VEP for: 19:g.18260077C>C | |
| [2024-04-29 13:22:39,109] {utils.py:315} DEBUG - 2024-04-29 13:22:39 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 19:g.18391193C>C;Error from VEP for: 19:g.18391193C>C | |
| [2024-04-29 13:22:39,843] {utils.py:315} DEBUG - 2024-04-29 13:22:39 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 19:g.18391240_18391241delinsCG;Error from VEP for: 19:g.18391240_18391241delinsCG | |
| [2024-04-29 13:22:39,843] {utils.py:315} DEBUG - 2024-04-29 13:22:39 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 19:g.18632881C>C;Error from VEP for: 19:g.18632881C>C | |
| [2024-04-29 13:22:39,843] {utils.py:315} DEBUG - 2024-04-29 13:22:39 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 19:g.18879554C>C;Error from VEP for: 19:g.18879554C>C | |
| [2024-04-29 13:22:39,843] {utils.py:315} DEBUG - 2024-04-29 13:22:39 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 19:g.18882347_18882352delinsCTCCCC;Error from VEP for: 19:g.18882347_18882352delinsCTCCCC | |
| [2024-04-29 13:22:39,843] {utils.py:315} DEBUG - 2024-04-29 13:22:39 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 19:g.18887993C>C;Error from VEP for: 19:g.18887993C>C | |
| [2024-04-29 13:22:39,843] {utils.py:315} DEBUG - 2024-04-29 13:22:39 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 19:g.33535248_33535251delinsGTTT;Error from VEP for: 19:g.33535248_33535251delinsGTTT | |
| [2024-04-29 13:22:39,843] {utils.py:315} DEBUG - 2024-04-29 13:22:39 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 19:g.35941423C>C;Error from VEP for: 19:g.35941423C>C | |
| [2024-04-29 13:22:39,843] {utils.py:315} DEBUG - 2024-04-29 13:22:39 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 19:g.36237319G>G;Error from VEP for: 19:g.36237319G>G | |
| [2024-04-29 13:22:39,843] {utils.py:315} DEBUG - 2024-04-29 13:22:39 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 19:g.39078349G>G;Error from VEP for: 19:g.39078349G>G | |
| [2024-04-29 13:22:39,843] {utils.py:315} DEBUG - 2024-04-29 13:22:39 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 19:g.39088047G>G;Error from VEP for: 19:g.39088047G>G | |
| [2024-04-29 13:22:39,843] {utils.py:315} DEBUG - 2024-04-29 13:22:39 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 19:g.39663591G>G;Error from VEP for: 19:g.39663591G>G | |
| [2024-04-29 13:22:39,843] {utils.py:315} DEBUG - 2024-04-29 13:22:39 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 19:g.39664547C>C;Error from VEP for: 19:g.39664547C>C | |
| [2024-04-29 13:22:39,843] {utils.py:315} DEBUG - 2024-04-29 13:22:39 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 19:g.39668366C>C;Error from VEP for: 19:g.39668366C>C | |
| [2024-04-29 13:22:39,843] {utils.py:315} DEBUG - 2024-04-29 13:22:39 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 19:g.40317962C>C;Error from VEP for: 19:g.40317962C>C | |
| [2024-04-29 13:22:39,843] {utils.py:315} DEBUG - 2024-04-29 13:22:39 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 19:g.40320999G>G;Error from VEP for: 19:g.40320999G>G | |
| [2024-04-29 13:22:39,843] {utils.py:315} DEBUG - 2024-04-29 13:22:39 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 19:g.40719820C>C;Error from VEP for: 19:g.40719820C>C | |
| [2024-04-29 13:22:39,843] {utils.py:315} DEBUG - 2024-04-29 13:22:39 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 19:g.40720945C>C;Error from VEP for: 19:g.40720945C>C | |
| [2024-04-29 13:22:39,843] {utils.py:315} DEBUG - 2024-04-29 13:22:39 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 19:g.40739722A>A;Error from VEP for: 19:g.40739722A>A | |
| [2024-04-29 13:22:39,843] {utils.py:315} DEBUG - 2024-04-29 13:22:39 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 19:g.41198864C>C;Error from VEP for: 19:g.41198864C>C | |
| [2024-04-29 13:22:39,843] {utils.py:315} DEBUG - 2024-04-29 13:22:39 [main] INFO org.cbioportal.annotator.internal.GenomeNexusImpl - On record 29500 out of 116708, annotation 25% complete | |
| [2024-04-29 13:22:39,843] {utils.py:315} DEBUG - 2024-04-29 13:22:39 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 19:g.41220286G>G;Error from VEP for: 19:g.41220286G>G | |
| [2024-04-29 13:22:39,844] {utils.py:315} DEBUG - 2024-04-29 13:22:39 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 19:g.41518327C>C;Error from VEP for: 19:g.41518327C>C | |
| [2024-04-29 13:22:39,844] {utils.py:315} DEBUG - 2024-04-29 13:22:39 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 19:g.41522939_41522940delinsAT;Error from VEP for: 19:g.41522939_41522940delinsAT | |
| [2024-04-29 13:22:39,844] {utils.py:315} DEBUG - 2024-04-29 13:22:39 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 19:g.41737179C>C;Error from VEP for: 19:g.41737179C>C | |
| [2024-04-29 13:22:39,844] {utils.py:315} DEBUG - 2024-04-29 13:22:39 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 19:g.41743896C>C;Error from VEP for: 19:g.41743896C>C | |
| [2024-04-29 13:22:39,844] {utils.py:315} DEBUG - 2024-04-29 13:22:39 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 19:g.41744385C>C;Error from VEP for: 19:g.41744385C>C | |
| [2024-04-29 13:22:39,844] {utils.py:315} DEBUG - 2024-04-29 13:22:39 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 19:g.41765973_41765992delinsGCAGTAGCATCACCTTGAAA;Error from VEP for: 19:g.41765973_41765992delinsGCAGTAGCATCACCTTGAAA | |
| [2024-04-29 13:22:39,844] {utils.py:315} DEBUG - 2024-04-29 13:22:39 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 19:g.42383610C>C;Error from VEP for: 19:g.42383610C>C | |
| [2024-04-29 13:22:39,844] {utils.py:315} DEBUG - 2024-04-29 13:22:39 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 19:g.42741010_42741012delinsCTT;Error from VEP for: 19:g.42741010_42741012delinsCTT | |
| [2024-04-29 13:22:39,844] {utils.py:315} DEBUG - 2024-04-29 13:22:39 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 19:g.42791339C>C;Error from VEP for: 19:g.42791339C>C | |
| [2024-04-29 13:22:39,844] {utils.py:315} DEBUG - 2024-04-29 13:22:39 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 19:g.42794627C>C;Error from VEP for: 19:g.42794627C>C | |
| [2024-04-29 13:22:39,844] {utils.py:315} DEBUG - 2024-04-29 13:22:39 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 19:g.42795075G>G;Error from VEP for: 19:g.42795075G>G | |
| [2024-04-29 13:22:39,844] {utils.py:315} DEBUG - 2024-04-29 13:22:39 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 19:g.42795269G>G;Error from VEP for: 19:g.42795269G>G | |
| [2024-04-29 13:22:39,844] {utils.py:315} DEBUG - 2024-04-29 13:22:39 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 19:g.42795609C>C;Error from VEP for: 19:g.42795609C>C | |
| [2024-04-29 13:22:39,844] {utils.py:315} DEBUG - 2024-04-29 13:22:39 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 19:g.42797376C>C;Error from VEP for: 19:g.42797376C>C | |
| [2024-04-29 13:22:39,844] {utils.py:315} DEBUG - 2024-04-29 13:22:39 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 19:g.42798164C>C;Error from VEP for: 19:g.42798164C>C | |
| [2024-04-29 13:22:39,844] {utils.py:315} DEBUG - 2024-04-29 13:22:39 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 19:g.42799098C>C;Error from VEP for: 19:g.42799098C>C | |
| [2024-04-29 13:22:40,296] {utils.py:315} DEBUG - 2024-04-29 13:22:39 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 19:g.45262726C>C;Error from VEP for: 19:g.45262726C>C | |
| [2024-04-29 13:22:40,296] {utils.py:315} DEBUG - 2024-04-29 13:22:39 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 19:g.45262726_45262729delinsCCCC;Error from VEP for: 19:g.45262726_45262729delinsCCCC | |
| [2024-04-29 13:22:40,296] {utils.py:315} DEBUG - 2024-04-29 13:22:39 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 19:g.45262880G>G;Error from VEP for: 19:g.45262880G>G | |
| [2024-04-29 13:22:40,296] {utils.py:315} DEBUG - 2024-04-29 13:22:39 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 19:g.45262965C>C;Error from VEP for: 19:g.45262965C>C | |
| [2024-04-29 13:22:40,296] {utils.py:315} DEBUG - 2024-04-29 13:22:39 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 19:g.45262965_45262966delinsCC;Error from VEP for: 19:g.45262965_45262966delinsCC | |
| [2024-04-29 13:22:40,296] {utils.py:315} DEBUG - 2024-04-29 13:22:39 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 19:g.45262965_45262967delinsCCC;Error from VEP for: 19:g.45262965_45262967delinsCCC | |
| [2024-04-29 13:22:40,296] {utils.py:315} DEBUG - 2024-04-29 13:22:39 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 19:g.45262965_45262968delinsCCCC;Error from VEP for: 19:g.45262965_45262968delinsCCCC | |
| [2024-04-29 13:22:40,297] {utils.py:315} DEBUG - 2024-04-29 13:22:39 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 19:g.45490501C>C;Error from VEP for: 19:g.45490501C>C | |
| [2024-04-29 13:22:40,297] {utils.py:315} DEBUG - 2024-04-29 13:22:39 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 19:g.45762391G>G;Error from VEP for: 19:g.45762391G>G | |
| [2024-04-29 13:22:40,297] {utils.py:315} DEBUG - 2024-04-29 13:22:39 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 19:g.45854768G>G;Error from VEP for: 19:g.45854768G>G | |
| [2024-04-29 13:22:40,297] {utils.py:315} DEBUG - 2024-04-29 13:22:39 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 19:g.45867313C>C;Error from VEP for: 19:g.45867313C>C | |
| [2024-04-29 13:22:40,297] {utils.py:315} DEBUG - 2024-04-29 13:22:39 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 19:g.45873749C>C;Error from VEP for: 19:g.45873749C>C | |
| [2024-04-29 13:22:40,297] {utils.py:315} DEBUG - 2024-04-29 13:22:39 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 19:g.46273463_46273486delinsCAGCAGCAGCAGCAGCAGCAGCAG;Error from VEP for: 19:g.46273463_46273486delinsCAGCAGCAGCAGCAGCAGCAGCAG | |
| [2024-04-29 13:22:40,297] {utils.py:315} DEBUG - 2024-04-29 13:22:39 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 19:g.46273463_46273489delinsCAGCAGCAGCAGCAGCAGCAGCAGCAG;Error from VEP for: 19:g.46273463_46273489delinsCAGCAGCAGCAGCAGCAGCAGCAGCAG | |
| [2024-04-29 13:22:40,297] {utils.py:315} DEBUG - 2024-04-29 13:22:39 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 19:g.46273508_46273525delinsCAGCAGCAGCAGCAGCAT;Error from VEP for: 19:g.46273508_46273525delinsCAGCAGCAGCAGCAGCAT | |
| [2024-04-29 13:22:40,297] {utils.py:315} DEBUG - 2024-04-29 13:22:39 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 19:g.46273765C>C;Error from VEP for: 19:g.46273765C>C | |
| [2024-04-29 13:22:40,297] {utils.py:315} DEBUG - 2024-04-29 13:22:39 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 19:g.46280835_46280836delinsAG;Error from VEP for: 19:g.46280835_46280836delinsAG | |
| [2024-04-29 13:22:40,297] {utils.py:315} DEBUG - 2024-04-29 13:22:39 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 19:g.46281936_46281937delinsCT;Error from VEP for: 19:g.46281936_46281937delinsCT | |
| [2024-04-29 13:22:40,297] {utils.py:315} DEBUG - 2024-04-29 13:22:39 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 19:g.46283130G>G;Error from VEP for: 19:g.46283130G>G | |
| [2024-04-29 13:22:40,297] {utils.py:315} DEBUG - 2024-04-29 13:22:39 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 19:g.47231884G>G;Error from VEP for: 19:g.47231884G>G | |
| [2024-04-29 13:22:40,297] {utils.py:315} DEBUG - 2024-04-29 13:22:39 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 19:g.48176865G>G;Error from VEP for: 19:g.48176865G>G | |
| [2024-04-29 13:22:40,297] {utils.py:315} DEBUG - 2024-04-29 13:22:39 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 19:g.48183094G>G;Error from VEP for: 19:g.48183094G>G | |
| [2024-04-29 13:22:40,297] {utils.py:315} DEBUG - 2024-04-29 13:22:39 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 19:g.48184382C>C;Error from VEP for: 19:g.48184382C>C | |
| [2024-04-29 13:22:40,297] {utils.py:315} DEBUG - 2024-04-29 13:22:39 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 19:g.48184484C>C;Error from VEP for: 19:g.48184484C>C | |
| [2024-04-29 13:22:40,297] {utils.py:315} DEBUG - 2024-04-29 13:22:39 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 19:g.48197891C>C;Error from VEP for: 19:g.48197891C>C | |
| [2024-04-29 13:22:40,297] {utils.py:315} DEBUG - 2024-04-29 13:22:39 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 19:g.48202014_48202015delinsCC;Error from VEP for: 19:g.48202014_48202015delinsCC | |
| [2024-04-29 13:22:40,297] {utils.py:315} DEBUG - 2024-04-29 13:22:39 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 19:g.48988848G>G;Error from VEP for: 19:g.48988848G>G | |
| [2024-04-29 13:22:40,297] {utils.py:315} DEBUG - 2024-04-29 13:22:39 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 19:g.49012148G>G;Error from VEP for: 19:g.49012148G>G | |
| [2024-04-29 13:22:40,297] {utils.py:315} DEBUG - 2024-04-29 13:22:39 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 19:g.49458971G>G;Error from VEP for: 19:g.49458971G>G | |
| [2024-04-29 13:22:40,297] {utils.py:315} DEBUG - 2024-04-29 13:22:39 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 19:g.49458971_49458972delinsGG;Error from VEP for: 19:g.49458971_49458972delinsGG | |
| [2024-04-29 13:22:40,298] {utils.py:315} DEBUG - 2024-04-29 13:22:39 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 19:g.49464486C>C;Error from VEP for: 19:g.49464486C>C | |
| [2024-04-29 13:22:40,298] {utils.py:315} DEBUG - 2024-04-29 13:22:39 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 19:g.49464508T>T;Error from VEP for: 19:g.49464508T>T | |
| [2024-04-29 13:22:40,298] {utils.py:315} DEBUG - 2024-04-29 13:22:39 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 19:g.49464508_49464509delinsTT;Error from VEP for: 19:g.49464508_49464509delinsTT | |
| [2024-04-29 13:22:40,298] {utils.py:315} DEBUG - 2024-04-29 13:22:39 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 19:g.49464508_49464510delinsTTT;Error from VEP for: 19:g.49464508_49464510delinsTTT | |
| [2024-04-29 13:22:40,298] {utils.py:315} DEBUG - 2024-04-29 13:22:39 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 19:g.49464508_49464511delinsTTTT;Error from VEP for: 19:g.49464508_49464511delinsTTTT | |
| [2024-04-29 13:22:40,298] {utils.py:315} DEBUG - 2024-04-29 13:22:39 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 19:g.49464508_49464512delinsTTTTT;Error from VEP for: 19:g.49464508_49464512delinsTTTTT | |
| [2024-04-29 13:22:40,298] {utils.py:315} DEBUG - 2024-04-29 13:22:39 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 19:g.50510972_50510992delinsCTGGTCTTCTGAGGGCTACAG;Error from VEP for: 19:g.50510972_50510992delinsCTGGTCTTCTGAGGGCTACAG | |
| [2024-04-29 13:22:40,298] {utils.py:315} DEBUG - 2024-04-29 13:22:39 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 19:g.50519410_50519412delinsAGG;Error from VEP for: 19:g.50519410_50519412delinsAGG | |
| [2024-04-29 13:22:40,298] {utils.py:315} DEBUG - 2024-04-29 13:22:39 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 19:g.50880894C>C;Error from VEP for: 19:g.50880894C>C | |
| [2024-04-29 13:22:40,298] {utils.py:315} DEBUG - 2024-04-29 13:22:40 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 19:g.50882029_50882031delinsCTT;Error from VEP for: 19:g.50882029_50882031delinsCTT | |
| [2024-04-29 13:22:41,210] {utils.py:315} DEBUG - 2024-04-29 13:22:40 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 19:g.51480672_51480675delinsGGTT;Error from VEP for: 19:g.51480672_51480675delinsGGTT | |
| [2024-04-29 13:22:41,210] {utils.py:315} DEBUG - 2024-04-29 13:22:41 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 19:g.51480672_51480675delinsGGTT;Error from VEP for: 19:g.51480672_51480675delinsGGTT | |
| [2024-04-29 13:22:41,778] {utils.py:315} DEBUG - 2024-04-29 13:22:41 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 19:g.51480672_51480675delinsGGTT;Error from VEP for: 19:g.51480672_51480675delinsGGTT | |
| [2024-04-29 13:22:41,779] {utils.py:315} DEBUG - 2024-04-29 13:22:41 [main] INFO org.cbioportal.annotator.internal.GenomeNexusImpl - On record 30000 out of 116708, annotation 25% complete | |
| [2024-04-29 13:22:41,779] {utils.py:315} DEBUG - 2024-04-29 13:22:41 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 19:g.54080223G>G;Error from VEP for: 19:g.54080223G>G | |
| [2024-04-29 13:22:41,779] {utils.py:315} DEBUG - 2024-04-29 13:22:41 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 19:g.54080449A>A;Error from VEP for: 19:g.54080449A>A | |
| [2024-04-29 13:22:41,779] {utils.py:315} DEBUG - 2024-04-29 13:22:41 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 19:g.54080640_54080641delinsTG;Error from VEP for: 19:g.54080640_54080641delinsTG | |
| [2024-04-29 13:22:41,779] {utils.py:315} DEBUG - 2024-04-29 13:22:41 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 19:g.54403949C>C;Error from VEP for: 19:g.54403949C>C | |
| [2024-04-29 13:22:41,779] {utils.py:315} DEBUG - 2024-04-29 13:22:41 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 19:g.54617959_54617960delinsAC;Error from VEP for: 19:g.54617959_54617960delinsAC | |
| [2024-04-29 13:22:42,868] {utils.py:315} DEBUG - 2024-04-29 13:22:41 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 19:g.55815036C>C;Error from VEP for: 19:g.55815036C>C | |
| [2024-04-29 13:22:42,868] {utils.py:315} DEBUG - 2024-04-29 13:22:41 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 19:g.56041210G>G;Error from VEP for: 19:g.56041210G>G | |
| [2024-04-29 13:22:42,868] {utils.py:315} DEBUG - 2024-04-29 13:22:41 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 19:g.57742494_57742507delinsGGACGAGCAGGATT;Error from VEP for: 19:g.57742494_57742507delinsGGACGAGCAGGATT | |
| [2024-04-29 13:22:42,868] {utils.py:315} DEBUG - 2024-04-29 13:22:42 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 19:g.57742494_57742507delinsGGACGAGCAGGATT;Error from VEP for: 19:g.57742494_57742507delinsGGACGAGCAGGATT | |
| [2024-04-29 13:22:43,530] {utils.py:315} DEBUG - 2024-04-29 13:22:42 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 19:g.57746647G>G;Error from VEP for: 19:g.57746647G>G | |
| [2024-04-29 13:22:43,530] {utils.py:315} DEBUG - 2024-04-29 13:22:42 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 19:g.57746858T>T;Error from VEP for: 19:g.57746858T>T | |
| [2024-04-29 13:22:43,530] {utils.py:315} DEBUG - 2024-04-29 13:22:42 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 19:g.58868870G>G;Error from VEP for: 19:g.58868870G>G | |
| [2024-04-29 13:22:43,530] {utils.py:315} DEBUG - 2024-04-29 13:22:42 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.1499906_1499907delinsTT;Error from VEP for: 2:g.1499906_1499907delinsTT | |
| [2024-04-29 13:22:43,530] {utils.py:315} DEBUG - 2024-04-29 13:22:42 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.1507748C>C;Error from VEP for: 2:g.1507748C>C | |
| [2024-04-29 13:22:43,530] {utils.py:315} DEBUG - 2024-04-29 13:22:42 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.1507755T>T;Error from VEP for: 2:g.1507755T>T | |
| [2024-04-29 13:22:43,530] {utils.py:315} DEBUG - 2024-04-29 13:22:42 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.1642734C>C;Error from VEP for: 2:g.1642734C>C | |
| [2024-04-29 13:22:43,530] {utils.py:315} DEBUG - 2024-04-29 13:22:42 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.1652960G>G;Error from VEP for: 2:g.1652960G>G | |
| [2024-04-29 13:22:43,530] {utils.py:315} DEBUG - 2024-04-29 13:22:42 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.9630176A>A;Error from VEP for: 2:g.9630176A>A | |
| [2024-04-29 13:22:43,530] {utils.py:315} DEBUG - 2024-04-29 13:22:42 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.9630241_9630245delinsTTGAT;Error from VEP for: 2:g.9630241_9630245delinsTTGAT | |
| [2024-04-29 13:22:43,530] {utils.py:315} DEBUG - 2024-04-29 13:22:42 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.9630245T>T;Error from VEP for: 2:g.9630245T>T | |
| [2024-04-29 13:22:43,530] {utils.py:315} DEBUG - 2024-04-29 13:22:43 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.9630245T>T;Error from VEP for: 2:g.9630245T>T | |
| [2024-04-29 13:22:44,675] {utils.py:315} DEBUG - 2024-04-29 13:22:43 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.9667799C>C;Error from VEP for: 2:g.9667799C>C | |
| [2024-04-29 13:22:44,676] {utils.py:315} DEBUG - 2024-04-29 13:22:43 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.10268984_10268985delinsTG;Error from VEP for: 2:g.10268984_10268985delinsTG | |
| [2024-04-29 13:22:44,676] {utils.py:315} DEBUG - 2024-04-29 13:22:43 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.10269545T>T;Error from VEP for: 2:g.10269545T>T | |
| [2024-04-29 13:22:44,676] {utils.py:315} DEBUG - 2024-04-29 13:22:43 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.11332603T>T;Error from VEP for: 2:g.11332603T>T | |
| [2024-04-29 13:22:44,676] {utils.py:315} DEBUG - 2024-04-29 13:22:43 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.11334379_11334385delinsTACTCTA;Error from VEP for: 2:g.11334379_11334385delinsTACTCTA | |
| [2024-04-29 13:22:44,676] {utils.py:315} DEBUG - 2024-04-29 13:22:43 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.11347937T>T;Error from VEP for: 2:g.11347937T>T | |
| [2024-04-29 13:22:44,676] {utils.py:315} DEBUG - 2024-04-29 13:22:43 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.11389837A>A;Error from VEP for: 2:g.11389837A>A | |
| [2024-04-29 13:22:44,676] {utils.py:315} DEBUG - 2024-04-29 13:22:43 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.11426745T>T;Error from VEP for: 2:g.11426745T>T | |
| [2024-04-29 13:22:44,676] {utils.py:315} DEBUG - 2024-04-29 13:22:43 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.11427810T>T;Error from VEP for: 2:g.11427810T>T | |
| [2024-04-29 13:22:44,676] {utils.py:315} DEBUG - 2024-04-29 13:22:43 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.12858399T>T;Error from VEP for: 2:g.12858399T>T | |
| [2024-04-29 13:22:44,676] {utils.py:315} DEBUG - 2024-04-29 13:22:43 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.12863620G>G;Error from VEP for: 2:g.12863620G>G | |
| [2024-04-29 13:22:44,676] {utils.py:315} DEBUG - 2024-04-29 13:22:43 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.16082314C>C;Error from VEP for: 2:g.16082314C>C | |
| [2024-04-29 13:22:44,676] {utils.py:315} DEBUG - 2024-04-29 13:22:43 [main] INFO org.cbioportal.annotator.internal.GenomeNexusImpl - On record 30500 out of 116708, annotation 26% complete | |
| [2024-04-29 13:22:44,676] {utils.py:315} DEBUG - 2024-04-29 13:22:43 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.16086265T>T;Error from VEP for: 2:g.16086265T>T | |
| [2024-04-29 13:22:44,676] {utils.py:315} DEBUG - 2024-04-29 13:22:43 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.24933982_24933983delinsTA;Error from VEP for: 2:g.24933982_24933983delinsTA | |
| [2024-04-29 13:22:44,676] {utils.py:315} DEBUG - 2024-04-29 13:22:43 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.24952369G>G;Error from VEP for: 2:g.24952369G>G | |
| [2024-04-29 13:22:44,676] {utils.py:315} DEBUG - 2024-04-29 13:22:44 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.27461412_27461414delinsGGA;Error from VEP for: 2:g.27461412_27461414delinsGGA | |
| [2024-04-29 13:22:45,446] {utils.py:315} DEBUG - 2024-04-29 13:22:44 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.27464212_27464213delinsCA;Error from VEP for: 2:g.27464212_27464213delinsCA | |
| [2024-04-29 13:22:45,446] {utils.py:315} DEBUG - 2024-04-29 13:22:44 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.27658018C>C;Error from VEP for: 2:g.27658018C>C | |
| [2024-04-29 13:22:45,446] {utils.py:315} DEBUG - 2024-04-29 13:22:44 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.27664750C>C;Error from VEP for: 2:g.27664750C>C | |
| [2024-04-29 13:22:45,446] {utils.py:315} DEBUG - 2024-04-29 13:22:44 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.29416468G>G;Error from VEP for: 2:g.29416468G>G | |
| [2024-04-29 13:22:45,446] {utils.py:315} DEBUG - 2024-04-29 13:22:44 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.29416648_29416650delinsCTC;Error from VEP for: 2:g.29416648_29416650delinsCTC | |
| [2024-04-29 13:22:45,446] {utils.py:315} DEBUG - 2024-04-29 13:22:44 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.29455205_29455207delinsGAG;Error from VEP for: 2:g.29455205_29455207delinsGAG | |
| [2024-04-29 13:22:45,446] {utils.py:315} DEBUG - 2024-04-29 13:22:44 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.29474017G>G;Error from VEP for: 2:g.29474017G>G | |
| [2024-04-29 13:22:45,446] {utils.py:315} DEBUG - 2024-04-29 13:22:44 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.32640173A>A;Error from VEP for: 2:g.32640173A>A | |
| [2024-04-29 13:22:45,447] {utils.py:315} DEBUG - 2024-04-29 13:22:44 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.32740837G>G;Error from VEP for: 2:g.32740837G>G | |
| [2024-04-29 13:22:45,447] {utils.py:315} DEBUG - 2024-04-29 13:22:44 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.32800345_32800347delinsGAA;Error from VEP for: 2:g.32800345_32800347delinsGAA | |
| [2024-04-29 13:22:45,447] {utils.py:315} DEBUG - 2024-04-29 13:22:44 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.32820101A>A;Error from VEP for: 2:g.32820101A>A | |
| [2024-04-29 13:22:45,447] {utils.py:315} DEBUG - 2024-04-29 13:22:44 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.37362636A>A;Error from VEP for: 2:g.37362636A>A | |
| [2024-04-29 13:22:45,447] {utils.py:315} DEBUG - 2024-04-29 13:22:44 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.37480134C>C;Error from VEP for: 2:g.37480134C>C | |
| [2024-04-29 13:22:45,447] {utils.py:315} DEBUG - 2024-04-29 13:22:44 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.37496478C>C;Error from VEP for: 2:g.37496478C>C | |
| [2024-04-29 13:22:45,447] {utils.py:315} DEBUG - 2024-04-29 13:22:44 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.37496646A>A;Error from VEP for: 2:g.37496646A>A | |
| [2024-04-29 13:22:45,447] {utils.py:315} DEBUG - 2024-04-29 13:22:44 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.37496651_37496654delinsAAAG;Error from VEP for: 2:g.37496651_37496654delinsAAAG | |
| [2024-04-29 13:22:45,447] {utils.py:315} DEBUG - 2024-04-29 13:22:44 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.37505135A>A;Error from VEP for: 2:g.37505135A>A | |
| [2024-04-29 13:22:45,447] {utils.py:315} DEBUG - 2024-04-29 13:22:44 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.37505287_37505289delinsATG;Error from VEP for: 2:g.37505287_37505289delinsATG | |
| [2024-04-29 13:22:45,447] {utils.py:315} DEBUG - 2024-04-29 13:22:44 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.37505368_37505369delinsAA;Error from VEP for: 2:g.37505368_37505369delinsAA | |
| [2024-04-29 13:22:45,447] {utils.py:315} DEBUG - 2024-04-29 13:22:44 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.37506994C>C;Error from VEP for: 2:g.37506994C>C | |
| [2024-04-29 13:22:45,447] {utils.py:315} DEBUG - 2024-04-29 13:22:44 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.38297793A>A;Error from VEP for: 2:g.38297793A>A | |
| [2024-04-29 13:22:45,447] {utils.py:315} DEBUG - 2024-04-29 13:22:44 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.38301673C>C;Error from VEP for: 2:g.38301673C>C | |
| [2024-04-29 13:22:45,447] {utils.py:315} DEBUG - 2024-04-29 13:22:45 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.39222520T>T;Error from VEP for: 2:g.39222520T>T | |
| [2024-04-29 13:22:46,166] {utils.py:315} DEBUG - 2024-04-29 13:22:45 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.39278480_39278483delinsAAAC;Error from VEP for: 2:g.39278480_39278483delinsAAAC | |
| [2024-04-29 13:22:46,166] {utils.py:315} DEBUG - 2024-04-29 13:22:45 [main] INFO org.cbioportal.annotator.internal.GenomeNexusImpl - On record 31000 out of 116708, annotation 26% complete | |
| [2024-04-29 13:22:46,166] {utils.py:315} DEBUG - 2024-04-29 13:22:45 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.39552931_39552932delinsAA;Error from VEP for: 2:g.39552931_39552932delinsAA | |
| [2024-04-29 13:22:46,166] {utils.py:315} DEBUG - 2024-04-29 13:22:45 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.39553380C>C;Error from VEP for: 2:g.39553380C>C | |
| [2024-04-29 13:22:46,166] {utils.py:315} DEBUG - 2024-04-29 13:22:45 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.42282085_42282087delinsTTC;Error from VEP for: 2:g.42282085_42282087delinsTTC | |
| [2024-04-29 13:22:46,166] {utils.py:315} DEBUG - 2024-04-29 13:22:45 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.42488302A>A;Error from VEP for: 2:g.42488302A>A | |
| [2024-04-29 13:22:46,166] {utils.py:315} DEBUG - 2024-04-29 13:22:45 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.42513400T>T;Error from VEP for: 2:g.42513400T>T | |
| [2024-04-29 13:22:46,167] {utils.py:315} DEBUG - 2024-04-29 13:22:45 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.46378264C>C;Error from VEP for: 2:g.46378264C>C | |
| [2024-04-29 13:22:46,167] {utils.py:315} DEBUG - 2024-04-29 13:22:45 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.47635601_47635603delinsTCT;Error from VEP for: 2:g.47635601_47635603delinsTCT | |
| [2024-04-29 13:22:46,167] {utils.py:315} DEBUG - 2024-04-29 13:22:45 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.47637247_47637248delinsTC;Error from VEP for: 2:g.47637247_47637248delinsTC | |
| [2024-04-29 13:22:46,167] {utils.py:315} DEBUG - 2024-04-29 13:22:45 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.47641559_47641564delinsTAAAAA;Error from VEP for: 2:g.47641559_47641564delinsTAAAAA | |
| [2024-04-29 13:22:46,167] {utils.py:315} DEBUG - 2024-04-29 13:22:45 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.47643465_47643466delinsTC;Error from VEP for: 2:g.47643465_47643466delinsTC | |
| [2024-04-29 13:22:46,167] {utils.py:315} DEBUG - 2024-04-29 13:22:45 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.47702220_47702222delinsGTC;Error from VEP for: 2:g.47702220_47702222delinsGTC | |
| [2024-04-29 13:22:46,167] {utils.py:315} DEBUG - 2024-04-29 13:22:45 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.47702370T>T;Error from VEP for: 2:g.47702370T>T | |
| [2024-04-29 13:22:46,167] {utils.py:315} DEBUG - 2024-04-29 13:22:45 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.47705563_47705564delinsCT;Error from VEP for: 2:g.47705563_47705564delinsCT | |
| [2024-04-29 13:22:46,167] {utils.py:315} DEBUG - 2024-04-29 13:22:45 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.48010254G>G;Error from VEP for: 2:g.48010254G>G | |
| [2024-04-29 13:22:46,167] {utils.py:315} DEBUG - 2024-04-29 13:22:45 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.48025989C>C;Error from VEP for: 2:g.48025989C>C | |
| [2024-04-29 13:22:46,167] {utils.py:315} DEBUG - 2024-04-29 13:22:45 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.48028257G>G;Error from VEP for: 2:g.48028257G>G | |
| [2024-04-29 13:22:46,167] {utils.py:315} DEBUG - 2024-04-29 13:22:45 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.48028293G>G;Error from VEP for: 2:g.48028293G>G | |
| [2024-04-29 13:22:46,167] {utils.py:315} DEBUG - 2024-04-29 13:22:45 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.48030640C>C;Error from VEP for: 2:g.48030640C>C | |
| [2024-04-29 13:22:46,167] {utils.py:315} DEBUG - 2024-04-29 13:22:45 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.48033792_48033795delinsTAAC;Error from VEP for: 2:g.48033792_48033795delinsTAAC | |
| [2024-04-29 13:22:46,167] {utils.py:315} DEBUG - 2024-04-29 13:22:45 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.58373509A>A;Error from VEP for: 2:g.58373509A>A | |
| [2024-04-29 13:22:46,167] {utils.py:315} DEBUG - 2024-04-29 13:22:45 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.58386493_58386495delinsAGG;Error from VEP for: 2:g.58386493_58386495delinsAGG | |
| [2024-04-29 13:22:46,167] {utils.py:315} DEBUG - 2024-04-29 13:22:45 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.58387283_58387284delinsCT;Error from VEP for: 2:g.58387283_58387284delinsCT | |
| [2024-04-29 13:22:46,168] {utils.py:315} DEBUG - 2024-04-29 13:22:45 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.58468467_58468468delinsAC;Error from VEP for: 2:g.58468467_58468468delinsAC | |
| [2024-04-29 13:22:46,168] {utils.py:315} DEBUG - 2024-04-29 13:22:45 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.60687401_60687404delinsTGTT;Error from VEP for: 2:g.60687401_60687404delinsTGTT | |
| [2024-04-29 13:22:46,168] {utils.py:315} DEBUG - 2024-04-29 13:22:45 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.60687522G>G;Error from VEP for: 2:g.60687522G>G | |
| [2024-04-29 13:22:46,168] {utils.py:315} DEBUG - 2024-04-29 13:22:45 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.60688554_60688562delinsTCCTCTTCT;Error from VEP for: 2:g.60688554_60688562delinsTCCTCTTCT | |
| [2024-04-29 13:22:46,168] {utils.py:315} DEBUG - 2024-04-29 13:22:45 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.60688969G>G;Error from VEP for: 2:g.60688969G>G | |
| [2024-04-29 13:22:46,168] {utils.py:315} DEBUG - 2024-04-29 13:22:45 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.60689254G>G;Error from VEP for: 2:g.60689254G>G | |
| [2024-04-29 13:22:46,168] {utils.py:315} DEBUG - 2024-04-29 13:22:46 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.63085639_63085643delinsTCTGA;Error from VEP for: 2:g.63085639_63085643delinsTCTGA | |
| [2024-04-29 13:22:47,602] {utils.py:315} DEBUG - 2024-04-29 13:22:46 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.69702914A>A;Error from VEP for: 2:g.69702914A>A | |
| [2024-04-29 13:22:47,602] {utils.py:315} DEBUG - 2024-04-29 13:22:46 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.69741754_69741756delinsTGT;Error from VEP for: 2:g.69741754_69741756delinsTGT | |
| [2024-04-29 13:22:47,602] {utils.py:315} DEBUG - 2024-04-29 13:22:47 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.69741754_69741756delinsTGT;Error from VEP for: 2:g.69741754_69741756delinsTGT | |
| [2024-04-29 13:22:48,919] {utils.py:315} DEBUG - 2024-04-29 13:22:47 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.69741760_69741765delinsTGTTGC;Error from VEP for: 2:g.69741760_69741765delinsTGTTGC | |
| [2024-04-29 13:22:48,919] {utils.py:315} DEBUG - 2024-04-29 13:22:47 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.69754390T>T;Error from VEP for: 2:g.69754390T>T | |
| [2024-04-29 13:22:48,920] {utils.py:315} DEBUG - 2024-04-29 13:22:47 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.69870218_69870229delinsTTTTTTTTTTTT;Error from VEP for: 2:g.69870218_69870229delinsTTTTTTTTTTTT | |
| [2024-04-29 13:22:48,920] {utils.py:315} DEBUG - 2024-04-29 13:22:47 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.79971632G>G;Error from VEP for: 2:g.79971632G>G | |
| [2024-04-29 13:22:48,920] {utils.py:315} DEBUG - 2024-04-29 13:22:47 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.79971696_79971708delinsGTGCGCAAACAAG;Error from VEP for: 2:g.79971696_79971708delinsGTGCGCAAACAAG | |
| [2024-04-29 13:22:48,920] {utils.py:315} DEBUG - 2024-04-29 13:22:47 [main] INFO org.cbioportal.annotator.internal.GenomeNexusImpl - On record 31500 out of 116708, annotation 26% complete | |
| [2024-04-29 13:22:48,920] {utils.py:315} DEBUG - 2024-04-29 13:22:47 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.80782932A>A;Error from VEP for: 2:g.80782932A>A | |
| [2024-04-29 13:22:48,920] {utils.py:315} DEBUG - 2024-04-29 13:22:47 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.88890027_88890029delinsCAT;Error from VEP for: 2:g.88890027_88890029delinsCAT | |
| [2024-04-29 13:22:48,920] {utils.py:315} DEBUG - 2024-04-29 13:22:47 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.98350785_98350787delinsGGG;Error from VEP for: 2:g.98350785_98350787delinsGGG | |
| [2024-04-29 13:22:48,920] {utils.py:315} DEBUG - 2024-04-29 13:22:47 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.98351655G>G;Error from VEP for: 2:g.98351655G>G | |
| [2024-04-29 13:22:48,920] {utils.py:315} DEBUG - 2024-04-29 13:22:47 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.102477240T>T;Error from VEP for: 2:g.102477240T>T | |
| [2024-04-29 13:22:48,920] {utils.py:315} DEBUG - 2024-04-29 13:22:47 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.102507895T>T;Error from VEP for: 2:g.102507895T>T | |
| [2024-04-29 13:22:48,920] {utils.py:315} DEBUG - 2024-04-29 13:22:47 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.102507895_102507896delinsTT;Error from VEP for: 2:g.102507895_102507896delinsTT | |
| [2024-04-29 13:22:48,920] {utils.py:315} DEBUG - 2024-04-29 13:22:48 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.102626147G>G;Error from VEP for: 2:g.102626147G>G | |
| [2024-04-29 13:22:49,634] {utils.py:315} DEBUG - 2024-04-29 13:22:48 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.102638649A>A;Error from VEP for: 2:g.102638649A>A | |
| [2024-04-29 13:22:49,634] {utils.py:315} DEBUG - 2024-04-29 13:22:48 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.102793184A>A;Error from VEP for: 2:g.102793184A>A | |
| [2024-04-29 13:22:49,634] {utils.py:315} DEBUG - 2024-04-29 13:22:48 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.111395468A>A;Error from VEP for: 2:g.111395468A>A | |
| [2024-04-29 13:22:49,634] {utils.py:315} DEBUG - 2024-04-29 13:22:48 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.111413317T>T;Error from VEP for: 2:g.111413317T>T | |
| [2024-04-29 13:22:49,634] {utils.py:315} DEBUG - 2024-04-29 13:22:48 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.113587719A>A;Error from VEP for: 2:g.113587719A>A | |
| [2024-04-29 13:22:49,634] {utils.py:315} DEBUG - 2024-04-29 13:22:48 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.113587858A>A;Error from VEP for: 2:g.113587858A>A | |
| [2024-04-29 13:22:49,634] {utils.py:315} DEBUG - 2024-04-29 13:22:48 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.113890607_113890609delinsCCT;Error from VEP for: 2:g.113890607_113890609delinsCCT | |
| [2024-04-29 13:22:49,634] {utils.py:315} DEBUG - 2024-04-29 13:22:48 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.121554984A>A;Error from VEP for: 2:g.121554984A>A | |
| [2024-04-29 13:22:49,634] {utils.py:315} DEBUG - 2024-04-29 13:22:48 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.121708914C>C;Error from VEP for: 2:g.121708914C>C | |
| [2024-04-29 13:22:49,634] {utils.py:315} DEBUG - 2024-04-29 13:22:48 [main] INFO org.cbioportal.annotator.internal.GenomeNexusImpl - On record 32000 out of 116708, annotation 27% complete | |
| [2024-04-29 13:22:49,634] {utils.py:315} DEBUG - 2024-04-29 13:22:48 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.121726465C>C;Error from VEP for: 2:g.121726465C>C | |
| [2024-04-29 13:22:49,634] {utils.py:315} DEBUG - 2024-04-29 13:22:48 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.128047671_128047675delinsTTCTC;Error from VEP for: 2:g.128047671_128047675delinsTTCTC | |
| [2024-04-29 13:22:49,634] {utils.py:315} DEBUG - 2024-04-29 13:22:48 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.128065065_128065067delinsTCT;Error from VEP for: 2:g.128065065_128065067delinsTCT | |
| [2024-04-29 13:22:49,634] {utils.py:315} DEBUG - 2024-04-29 13:22:48 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.128079681_128079683delinsCTT;Error from VEP for: 2:g.128079681_128079683delinsCTT | |
| [2024-04-29 13:22:49,635] {utils.py:315} DEBUG - 2024-04-29 13:22:48 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.128079791C>C;Error from VEP for: 2:g.128079791C>C | |
| [2024-04-29 13:22:49,635] {utils.py:315} DEBUG - 2024-04-29 13:22:48 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.128081812_128081813delinsCT;Error from VEP for: 2:g.128081812_128081813delinsCT | |
| [2024-04-29 13:22:49,635] {utils.py:315} DEBUG - 2024-04-29 13:22:48 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.128096511T>T;Error from VEP for: 2:g.128096511T>T | |
| [2024-04-29 13:22:49,635] {utils.py:315} DEBUG - 2024-04-29 13:22:48 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.135738293A>A;Error from VEP for: 2:g.135738293A>A | |
| [2024-04-29 13:22:49,635] {utils.py:315} DEBUG - 2024-04-29 13:22:48 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.135743471T>T;Error from VEP for: 2:g.135743471T>T | |
| [2024-04-29 13:22:49,635] {utils.py:315} DEBUG - 2024-04-29 13:22:48 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.135757546G>G;Error from VEP for: 2:g.135757546G>G | |
| [2024-04-29 13:22:49,635] {utils.py:315} DEBUG - 2024-04-29 13:22:48 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.136872393A>A;Error from VEP for: 2:g.136872393A>A | |
| [2024-04-29 13:22:49,635] {utils.py:315} DEBUG - 2024-04-29 13:22:49 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.136872393A>A;Error from VEP for: 2:g.136872393A>A | |
| [2024-04-29 13:22:51,305] {utils.py:315} DEBUG - 2024-04-29 13:22:49 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.136872415A>A;Error from VEP for: 2:g.136872415A>A | |
| [2024-04-29 13:22:51,305] {utils.py:315} DEBUG - 2024-04-29 13:22:49 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.141032034C>C;Error from VEP for: 2:g.141032034C>C | |
| [2024-04-29 13:22:51,305] {utils.py:315} DEBUG - 2024-04-29 13:22:49 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.141081572T>T;Error from VEP for: 2:g.141081572T>T | |
| [2024-04-29 13:22:51,305] {utils.py:315} DEBUG - 2024-04-29 13:22:49 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.141143539T>T;Error from VEP for: 2:g.141143539T>T | |
| [2024-04-29 13:22:51,305] {utils.py:315} DEBUG - 2024-04-29 13:22:49 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.141245301T>T;Error from VEP for: 2:g.141245301T>T | |
| [2024-04-29 13:22:51,305] {utils.py:315} DEBUG - 2024-04-29 13:22:49 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.141299517C>C;Error from VEP for: 2:g.141299517C>C | |
| [2024-04-29 13:22:51,305] {utils.py:315} DEBUG - 2024-04-29 13:22:49 [main] INFO org.cbioportal.annotator.internal.GenomeNexusImpl - On record 32500 out of 116708, annotation 27% complete | |
| [2024-04-29 13:22:51,305] {utils.py:315} DEBUG - 2024-04-29 13:22:49 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.141607758C>C;Error from VEP for: 2:g.141607758C>C | |
| [2024-04-29 13:22:51,305] {utils.py:315} DEBUG - 2024-04-29 13:22:49 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.141625799A>A;Error from VEP for: 2:g.141625799A>A | |
| [2024-04-29 13:22:51,305] {utils.py:315} DEBUG - 2024-04-29 13:22:49 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.141707843_141707844delinsCC;Error from VEP for: 2:g.141707843_141707844delinsCC | |
| [2024-04-29 13:22:51,305] {utils.py:315} DEBUG - 2024-04-29 13:22:49 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.141812783C>C;Error from VEP for: 2:g.141812783C>C | |
| [2024-04-29 13:22:51,305] {utils.py:315} DEBUG - 2024-04-29 13:22:49 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.142567922G>G;Error from VEP for: 2:g.142567922G>G | |
| [2024-04-29 13:22:51,305] {utils.py:315} DEBUG - 2024-04-29 13:22:49 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.148657041A>A;Error from VEP for: 2:g.148657041A>A | |
| [2024-04-29 13:22:51,305] {utils.py:315} DEBUG - 2024-04-29 13:22:49 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.148657074G>G;Error from VEP for: 2:g.148657074G>G | |
| [2024-04-29 13:22:51,306] {utils.py:315} DEBUG - 2024-04-29 13:22:49 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.148657349A>A;Error from VEP for: 2:g.148657349A>A | |
| [2024-04-29 13:22:51,306] {utils.py:315} DEBUG - 2024-04-29 13:22:49 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.148683686A>A;Error from VEP for: 2:g.148683686A>A | |
| [2024-04-29 13:22:51,306] {utils.py:315} DEBUG - 2024-04-29 13:22:51 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.148683686A>A;Error from VEP for: 2:g.148683686A>A | |
| [2024-04-29 13:22:51,837] {utils.py:315} DEBUG - 2024-04-29 13:22:51 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.152293790T>T;Error from VEP for: 2:g.152293790T>T | |
| [2024-04-29 13:22:51,837] {utils.py:315} DEBUG - 2024-04-29 13:22:51 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.152319553A>A;Error from VEP for: 2:g.152319553A>A | |
| [2024-04-29 13:22:51,837] {utils.py:315} DEBUG - 2024-04-29 13:22:51 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.152320541A>A;Error from VEP for: 2:g.152320541A>A | |
| [2024-04-29 13:22:51,837] {utils.py:315} DEBUG - 2024-04-29 13:22:51 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.152320713_152320715delinsAAG;Error from VEP for: 2:g.152320713_152320715delinsAAG | |
| [2024-04-29 13:22:51,838] {utils.py:315} DEBUG - 2024-04-29 13:22:51 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.152321320A>A;Error from VEP for: 2:g.152321320A>A | |
| [2024-04-29 13:22:51,838] {utils.py:315} DEBUG - 2024-04-29 13:22:51 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.152321544_152321549delinsAAATTT;Error from VEP for: 2:g.152321544_152321549delinsAAATTT | |
| [2024-04-29 13:22:51,838] {utils.py:315} DEBUG - 2024-04-29 13:22:51 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.152331608T>T;Error from VEP for: 2:g.152331608T>T | |
| [2024-04-29 13:22:51,838] {utils.py:315} DEBUG - 2024-04-29 13:22:51 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.152331770T>T;Error from VEP for: 2:g.152331770T>T | |
| [2024-04-29 13:22:51,838] {utils.py:315} DEBUG - 2024-04-29 13:22:51 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.158390344A>A;Error from VEP for: 2:g.158390344A>A | |
| [2024-04-29 13:22:51,838] {utils.py:315} DEBUG - 2024-04-29 13:22:51 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.158390344_158390345delinsAA;Error from VEP for: 2:g.158390344_158390345delinsAA | |
| [2024-04-29 13:22:51,838] {utils.py:315} DEBUG - 2024-04-29 13:22:51 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.158390353_158390354delinsAT;Error from VEP for: 2:g.158390353_158390354delinsAT | |
| [2024-04-29 13:22:51,838] {utils.py:315} DEBUG - 2024-04-29 13:22:51 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.158637068_158637069delinsCA;Error from VEP for: 2:g.158637068_158637069delinsCA | |
| [2024-04-29 13:22:51,838] {utils.py:315} DEBUG - 2024-04-29 13:22:51 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.160968601G>G;Error from VEP for: 2:g.160968601G>G | |
| [2024-04-29 13:22:51,838] {utils.py:315} DEBUG - 2024-04-29 13:22:51 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.170063198_170063200delinsGTT;Error from VEP for: 2:g.170063198_170063200delinsGTT | |
| [2024-04-29 13:22:51,838] {utils.py:315} DEBUG - 2024-04-29 13:22:51 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.170088332A>A;Error from VEP for: 2:g.170088332A>A | |
| [2024-04-29 13:22:51,838] {utils.py:315} DEBUG - 2024-04-29 13:22:51 [main] INFO org.cbioportal.annotator.internal.GenomeNexusImpl - On record 33000 out of 116708, annotation 28% complete | |
| [2024-04-29 13:22:51,838] {utils.py:315} DEBUG - 2024-04-29 13:22:51 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.171034664_171034669delinsAAGTCC;Error from VEP for: 2:g.171034664_171034669delinsAAGTCC | |
| [2024-04-29 13:22:51,838] {utils.py:315} DEBUG - 2024-04-29 13:22:51 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.171240259C>C;Error from VEP for: 2:g.171240259C>C | |
| [2024-04-29 13:22:51,838] {utils.py:315} DEBUG - 2024-04-29 13:22:51 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.171376043A>A;Error from VEP for: 2:g.171376043A>A | |
| [2024-04-29 13:22:52,460] {utils.py:315} DEBUG - 2024-04-29 13:22:51 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.171376171_171376172delinsGA;Error from VEP for: 2:g.171376171_171376172delinsGA | |
| [2024-04-29 13:22:52,460] {utils.py:315} DEBUG - 2024-04-29 13:22:51 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.171400488T>T;Error from VEP for: 2:g.171400488T>T | |
| [2024-04-29 13:22:52,460] {utils.py:315} DEBUG - 2024-04-29 13:22:51 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.171509587T>T;Error from VEP for: 2:g.171509587T>T | |
| [2024-04-29 13:22:52,460] {utils.py:315} DEBUG - 2024-04-29 13:22:51 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.171850179_171850181delinsAAA;Error from VEP for: 2:g.171850179_171850181delinsAAA | |
| [2024-04-29 13:22:52,460] {utils.py:315} DEBUG - 2024-04-29 13:22:51 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.171850179_171850184delinsAAAAAA;Error from VEP for: 2:g.171850179_171850184delinsAAAAAA | |
| [2024-04-29 13:22:52,461] {utils.py:315} DEBUG - 2024-04-29 13:22:51 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.171850200_171850201delinsAG;Error from VEP for: 2:g.171850200_171850201delinsAG | |
| [2024-04-29 13:22:52,461] {utils.py:315} DEBUG - 2024-04-29 13:22:51 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.171850201G>G;Error from VEP for: 2:g.171850201G>G | |
| [2024-04-29 13:22:52,461] {utils.py:315} DEBUG - 2024-04-29 13:22:51 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.171850204_171850207delinsAAAG;Error from VEP for: 2:g.171850204_171850207delinsAAAG | |
| [2024-04-29 13:22:52,461] {utils.py:315} DEBUG - 2024-04-29 13:22:51 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.172016964C>C;Error from VEP for: 2:g.172016964C>C | |
| [2024-04-29 13:22:52,461] {utils.py:315} DEBUG - 2024-04-29 13:22:51 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.172017033G>G;Error from VEP for: 2:g.172017033G>G | |
| [2024-04-29 13:22:52,461] {utils.py:315} DEBUG - 2024-04-29 13:22:51 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.174062830A>A;Error from VEP for: 2:g.174062830A>A | |
| [2024-04-29 13:22:52,461] {utils.py:315} DEBUG - 2024-04-29 13:22:51 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.174068520_174068522delinsGTA;Error from VEP for: 2:g.174068520_174068522delinsGTA | |
| [2024-04-29 13:22:52,461] {utils.py:315} DEBUG - 2024-04-29 13:22:51 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.174074693T>T;Error from VEP for: 2:g.174074693T>T | |
| [2024-04-29 13:22:52,461] {utils.py:315} DEBUG - 2024-04-29 13:22:51 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.174086202_174086204delinsGAT;Error from VEP for: 2:g.174086202_174086204delinsGAT | |
| [2024-04-29 13:22:52,461] {utils.py:315} DEBUG - 2024-04-29 13:22:51 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.174128577_174128579delinsATT;Error from VEP for: 2:g.174128577_174128579delinsATT | |
| [2024-04-29 13:22:52,461] {utils.py:315} DEBUG - 2024-04-29 13:22:51 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.174131371G>G;Error from VEP for: 2:g.174131371G>G | |
| [2024-04-29 13:22:52,461] {utils.py:315} DEBUG - 2024-04-29 13:22:51 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.174131512A>A;Error from VEP for: 2:g.174131512A>A | |
| [2024-04-29 13:22:52,461] {utils.py:315} DEBUG - 2024-04-29 13:22:51 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.174131512_174131513delinsAA;Error from VEP for: 2:g.174131512_174131513delinsAA | |
| [2024-04-29 13:22:52,461] {utils.py:315} DEBUG - 2024-04-29 13:22:51 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.174131512_174131514delinsAAA;Error from VEP for: 2:g.174131512_174131514delinsAAA | |
| [2024-04-29 13:22:52,461] {utils.py:315} DEBUG - 2024-04-29 13:22:51 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.175742640T>T;Error from VEP for: 2:g.175742640T>T | |
| [2024-04-29 13:22:52,461] {utils.py:315} DEBUG - 2024-04-29 13:22:51 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.175939224A>A;Error from VEP for: 2:g.175939224A>A | |
| [2024-04-29 13:22:52,461] {utils.py:315} DEBUG - 2024-04-29 13:22:51 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.175939578G>G;Error from VEP for: 2:g.175939578G>G | |
| [2024-04-29 13:22:52,461] {utils.py:315} DEBUG - 2024-04-29 13:22:52 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.175979367A>A;Error from VEP for: 2:g.175979367A>A | |
| [2024-04-29 13:22:53,676] {utils.py:315} DEBUG - 2024-04-29 13:22:52 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.176958225G>G;Error from VEP for: 2:g.176958225G>G | |
| [2024-04-29 13:22:53,676] {utils.py:315} DEBUG - 2024-04-29 13:22:52 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.176973638C>C;Error from VEP for: 2:g.176973638C>C | |
| [2024-04-29 13:22:53,676] {utils.py:315} DEBUG - 2024-04-29 13:22:52 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.176981559A>A;Error from VEP for: 2:g.176981559A>A | |
| [2024-04-29 13:22:53,676] {utils.py:315} DEBUG - 2024-04-29 13:22:52 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.179391640T>T;Error from VEP for: 2:g.179391640T>T | |
| [2024-04-29 13:22:53,676] {utils.py:315} DEBUG - 2024-04-29 13:22:53 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.179395826_179395828delinsAGA;Error from VEP for: 2:g.179395826_179395828delinsAGA | |
| [2024-04-29 13:22:55,173] {utils.py:315} DEBUG - 2024-04-29 13:22:53 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.179398170G>G;Error from VEP for: 2:g.179398170G>G | |
| [2024-04-29 13:22:55,173] {utils.py:315} DEBUG - 2024-04-29 13:22:53 [main] INFO org.cbioportal.annotator.internal.GenomeNexusImpl - On record 33500 out of 116708, annotation 28% complete | |
| [2024-04-29 13:22:55,173] {utils.py:315} DEBUG - 2024-04-29 13:22:53 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.179408625T>T;Error from VEP for: 2:g.179408625T>T | |
| [2024-04-29 13:22:55,173] {utils.py:315} DEBUG - 2024-04-29 13:22:53 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.179410231T>T;Error from VEP for: 2:g.179410231T>T | |
| [2024-04-29 13:22:55,173] {utils.py:315} DEBUG - 2024-04-29 13:22:53 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.179412467_179412472delinsCACCAG;Error from VEP for: 2:g.179412467_179412472delinsCACCAG | |
| [2024-04-29 13:22:55,173] {utils.py:315} DEBUG - 2024-04-29 13:22:53 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.179416861_179416863delinsCTC;Error from VEP for: 2:g.179416861_179416863delinsCTC | |
| [2024-04-29 13:22:55,173] {utils.py:315} DEBUG - 2024-04-29 13:22:53 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.179422685_179422687delinsAAT;Error from VEP for: 2:g.179422685_179422687delinsAAT | |
| [2024-04-29 13:22:55,173] {utils.py:315} DEBUG - 2024-04-29 13:22:53 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.179424125_179424127delinsCTT;Error from VEP for: 2:g.179424125_179424127delinsCTT | |
| [2024-04-29 13:22:55,173] {utils.py:315} DEBUG - 2024-04-29 13:22:53 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.179424205C>C;Error from VEP for: 2:g.179424205C>C | |
| [2024-04-29 13:22:55,173] {utils.py:315} DEBUG - 2024-04-29 13:22:53 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.179427957G>G;Error from VEP for: 2:g.179427957G>G | |
| [2024-04-29 13:22:55,173] {utils.py:315} DEBUG - 2024-04-29 13:22:55 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.179432761_179432764delinsTTTC;Error from VEP for: 2:g.179432761_179432764delinsTTTC | |
| [2024-04-29 13:22:56,841] {utils.py:315} DEBUG - 2024-04-29 13:22:55 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.179435978T>T;Error from VEP for: 2:g.179435978T>T | |
| [2024-04-29 13:22:56,842] {utils.py:315} DEBUG - 2024-04-29 13:22:55 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.179436257_179436259delinsTTG;Error from VEP for: 2:g.179436257_179436259delinsTTG | |
| [2024-04-29 13:22:56,842] {utils.py:315} DEBUG - 2024-04-29 13:22:55 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.179438043_179438044delinsGC;Error from VEP for: 2:g.179438043_179438044delinsGC | |
| [2024-04-29 13:22:56,842] {utils.py:315} DEBUG - 2024-04-29 13:22:55 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.179438935_179438944delinsTTGGCCTTCA;Error from VEP for: 2:g.179438935_179438944delinsTTGGCCTTCA | |
| [2024-04-29 13:22:56,842] {utils.py:315} DEBUG - 2024-04-29 13:22:55 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.179440920_179440922delinsGTT;Error from VEP for: 2:g.179440920_179440922delinsGTT | |
| [2024-04-29 13:22:56,842] {utils.py:315} DEBUG - 2024-04-29 13:22:55 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.179445078T>T;Error from VEP for: 2:g.179445078T>T | |
| [2024-04-29 13:22:56,842] {utils.py:315} DEBUG - 2024-04-29 13:22:55 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.179446352T>T;Error from VEP for: 2:g.179446352T>T | |
| [2024-04-29 13:22:56,842] {utils.py:315} DEBUG - 2024-04-29 13:22:55 [main] INFO org.cbioportal.annotator.internal.GenomeNexusImpl - On record 34000 out of 116708, annotation 29% complete | |
| [2024-04-29 13:22:56,842] {utils.py:315} DEBUG - 2024-04-29 13:22:55 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.179456385T>T;Error from VEP for: 2:g.179456385T>T | |
| [2024-04-29 13:22:56,842] {utils.py:315} DEBUG - 2024-04-29 13:22:55 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.179457381G>G;Error from VEP for: 2:g.179457381G>G | |
| [2024-04-29 13:22:56,842] {utils.py:315} DEBUG - 2024-04-29 13:22:55 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.179463253_179463255delinsCTT;Error from VEP for: 2:g.179463253_179463255delinsCTT | |
| [2024-04-29 13:22:56,842] {utils.py:315} DEBUG - 2024-04-29 13:22:55 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.179467186_179467188delinsCTT;Error from VEP for: 2:g.179467186_179467188delinsCTT | |
| [2024-04-29 13:22:56,842] {utils.py:315} DEBUG - 2024-04-29 13:22:55 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.179469896T>T;Error from VEP for: 2:g.179469896T>T | |
| [2024-04-29 13:22:56,842] {utils.py:315} DEBUG - 2024-04-29 13:22:55 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.179473392T>T;Error from VEP for: 2:g.179473392T>T | |
| [2024-04-29 13:22:56,842] {utils.py:315} DEBUG - 2024-04-29 13:22:55 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.179474290G>G;Error from VEP for: 2:g.179474290G>G | |
| [2024-04-29 13:22:56,842] {utils.py:315} DEBUG - 2024-04-29 13:22:56 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.179476320T>T;Error from VEP for: 2:g.179476320T>T | |
| [2024-04-29 13:22:58,373] {utils.py:315} DEBUG - 2024-04-29 13:22:56 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.179477976T>T;Error from VEP for: 2:g.179477976T>T | |
| [2024-04-29 13:22:58,373] {utils.py:315} DEBUG - 2024-04-29 13:22:56 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.179480130T>T;Error from VEP for: 2:g.179480130T>T | |
| [2024-04-29 13:22:58,373] {utils.py:315} DEBUG - 2024-04-29 13:22:56 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.179486691T>T;Error from VEP for: 2:g.179486691T>T | |
| [2024-04-29 13:22:58,373] {utils.py:315} DEBUG - 2024-04-29 13:22:56 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.179486701T>T;Error from VEP for: 2:g.179486701T>T | |
| [2024-04-29 13:22:58,373] {utils.py:315} DEBUG - 2024-04-29 13:22:56 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.179499178_179499180delinsAAC;Error from VEP for: 2:g.179499178_179499180delinsAAC | |
| [2024-04-29 13:22:58,373] {utils.py:315} DEBUG - 2024-04-29 13:22:56 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.179505993T>T;Error from VEP for: 2:g.179505993T>T | |
| [2024-04-29 13:22:58,373] {utils.py:315} DEBUG - 2024-04-29 13:22:56 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.179516828G>G;Error from VEP for: 2:g.179516828G>G | |
| [2024-04-29 13:22:58,373] {utils.py:315} DEBUG - 2024-04-29 13:22:56 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.179535860T>T;Error from VEP for: 2:g.179535860T>T | |
| [2024-04-29 13:22:58,373] {utils.py:315} DEBUG - 2024-04-29 13:22:56 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.179536771T>T;Error from VEP for: 2:g.179536771T>T | |
| [2024-04-29 13:22:58,373] {utils.py:315} DEBUG - 2024-04-29 13:22:56 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.179539084_179539086delinsTTC;Error from VEP for: 2:g.179539084_179539086delinsTTC | |
| [2024-04-29 13:22:58,373] {utils.py:315} DEBUG - 2024-04-29 13:22:56 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.179542390_179542392delinsCTT;Error from VEP for: 2:g.179542390_179542392delinsCTT | |
| [2024-04-29 13:22:58,373] {utils.py:315} DEBUG - 2024-04-29 13:22:56 [main] INFO org.cbioportal.annotator.internal.GenomeNexusImpl - On record 34500 out of 116708, annotation 29% complete | |
| [2024-04-29 13:22:58,373] {utils.py:315} DEBUG - 2024-04-29 13:22:56 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.179546149T>T;Error from VEP for: 2:g.179546149T>T | |
| [2024-04-29 13:22:58,374] {utils.py:315} DEBUG - 2024-04-29 13:22:56 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.179547531_179547548delinsTCATATTCTTCATATTCC;Error from VEP for: 2:g.179547531_179547548delinsTCATATTCTTCATATTCC | |
| [2024-04-29 13:22:58,374] {utils.py:315} DEBUG - 2024-04-29 13:22:56 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.179549440T>T;Error from VEP for: 2:g.179549440T>T | |
| [2024-04-29 13:22:58,374] {utils.py:315} DEBUG - 2024-04-29 13:22:56 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.179581889C>C;Error from VEP for: 2:g.179581889C>C | |
| [2024-04-29 13:22:58,374] {utils.py:315} DEBUG - 2024-04-29 13:22:56 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.179582703C>C;Error from VEP for: 2:g.179582703C>C | |
| [2024-04-29 13:22:58,374] {utils.py:315} DEBUG - 2024-04-29 13:22:56 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.179583429A>A;Error from VEP for: 2:g.179583429A>A | |
| [2024-04-29 13:22:58,374] {utils.py:315} DEBUG - 2024-04-29 13:22:58 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.179584853_179584854delinsCT;Error from VEP for: 2:g.179584853_179584854delinsCT | |
| [2024-04-29 13:22:59,226] {utils.py:315} DEBUG - 2024-04-29 13:22:58 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.179595092G>G;Error from VEP for: 2:g.179595092G>G | |
| [2024-04-29 13:22:59,226] {utils.py:315} DEBUG - 2024-04-29 13:22:58 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.179598102T>T;Error from VEP for: 2:g.179598102T>T | |
| [2024-04-29 13:22:59,226] {utils.py:315} DEBUG - 2024-04-29 13:22:58 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.179600384G>G;Error from VEP for: 2:g.179600384G>G | |
| [2024-04-29 13:22:59,226] {utils.py:315} DEBUG - 2024-04-29 13:22:58 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.179604379T>T;Error from VEP for: 2:g.179604379T>T | |
| [2024-04-29 13:22:59,226] {utils.py:315} DEBUG - 2024-04-29 13:22:58 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.179604689T>T;Error from VEP for: 2:g.179604689T>T | |
| [2024-04-29 13:22:59,226] {utils.py:315} DEBUG - 2024-04-29 13:22:58 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.179611375C>C;Error from VEP for: 2:g.179611375C>C | |
| [2024-04-29 13:22:59,226] {utils.py:315} DEBUG - 2024-04-29 13:22:58 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.179611843_179611875delinsTATCTCTCCAGAGTCTCTCCTGGGGGTGTGGAA;Error from VEP for: 2:g.179611843_179611875delinsTATCTCTCCAGAGTCTCTCCTGGGGGTGTGGAA | |
| [2024-04-29 13:22:59,227] {utils.py:315} DEBUG - 2024-04-29 13:22:58 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.179611963G>G;Error from VEP for: 2:g.179611963G>G | |
| [2024-04-29 13:22:59,227] {utils.py:315} DEBUG - 2024-04-29 13:22:58 [main] INFO org.cbioportal.annotator.internal.GenomeNexusImpl - On record 35000 out of 116708, annotation 29% complete | |
| [2024-04-29 13:22:59,227] {utils.py:315} DEBUG - 2024-04-29 13:22:58 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.179612891T>T;Error from VEP for: 2:g.179612891T>T | |
| [2024-04-29 13:22:59,227] {utils.py:315} DEBUG - 2024-04-29 13:22:58 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.179621155A>A;Error from VEP for: 2:g.179621155A>A | |
| [2024-04-29 13:22:59,227] {utils.py:315} DEBUG - 2024-04-29 13:22:59 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.179646985G>G;Error from VEP for: 2:g.179646985G>G | |
| [2024-04-29 13:23:02,130] {utils.py:315} DEBUG - 2024-04-29 13:22:59 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.179647781T>T;Error from VEP for: 2:g.179647781T>T | |
| [2024-04-29 13:23:02,132] {utils.py:315} DEBUG - 2024-04-29 13:22:59 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.187511448A>A;Error from VEP for: 2:g.187511448A>A | |
| [2024-04-29 13:23:02,132] {utils.py:315} DEBUG - 2024-04-29 13:22:59 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.187521085G>G;Error from VEP for: 2:g.187521085G>G | |
| [2024-04-29 13:23:02,132] {utils.py:315} DEBUG - 2024-04-29 13:22:59 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.189849608_189849616delinsGACGATCAA;Error from VEP for: 2:g.189849608_189849616delinsGACGATCAA | |
| [2024-04-29 13:23:02,132] {utils.py:315} DEBUG - 2024-04-29 13:22:59 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.189854864C>C;Error from VEP for: 2:g.189854864C>C | |
| [2024-04-29 13:23:02,132] {utils.py:315} DEBUG - 2024-04-29 13:22:59 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.189859023G>G;Error from VEP for: 2:g.189859023G>G | |
| [2024-04-29 13:23:02,132] {utils.py:315} DEBUG - 2024-04-29 13:22:59 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.189860905G>G;Error from VEP for: 2:g.189860905G>G | |
| [2024-04-29 13:23:02,132] {utils.py:315} DEBUG - 2024-04-29 13:22:59 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.189876526A>A;Error from VEP for: 2:g.189876526A>A | |
| [2024-04-29 13:23:02,132] {utils.py:315} DEBUG - 2024-04-29 13:22:59 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.190660531_190660535delinsAACGG;Error from VEP for: 2:g.190660531_190660535delinsAACGG | |
| [2024-04-29 13:23:02,132] {utils.py:315} DEBUG - 2024-04-29 13:22:59 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.190670540A>A;Error from VEP for: 2:g.190670540A>A | |
| [2024-04-29 13:23:02,132] {utils.py:315} DEBUG - 2024-04-29 13:22:59 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.190670540_190670541delinsAA;Error from VEP for: 2:g.190670540_190670541delinsAA | |
| [2024-04-29 13:23:02,132] {utils.py:315} DEBUG - 2024-04-29 13:22:59 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.190682810A>A;Error from VEP for: 2:g.190682810A>A | |
| [2024-04-29 13:23:02,133] {utils.py:315} DEBUG - 2024-04-29 13:22:59 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.190719361A>A;Error from VEP for: 2:g.190719361A>A | |
| [2024-04-29 13:23:02,133] {utils.py:315} DEBUG - 2024-04-29 13:22:59 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.190728930A>A;Error from VEP for: 2:g.190728930A>A | |
| [2024-04-29 13:23:02,133] {utils.py:315} DEBUG - 2024-04-29 13:22:59 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.191840353T>T;Error from VEP for: 2:g.191840353T>T | |
| [2024-04-29 13:23:02,133] {utils.py:315} DEBUG - 2024-04-29 13:23:02 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.191840353T>T;Error from VEP for: 2:g.191840353T>T | |
| [2024-04-29 13:23:02,714] {utils.py:315} DEBUG - 2024-04-29 13:23:02 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.191840353_191840354delinsTT;Error from VEP for: 2:g.191840353_191840354delinsTT | |
| [2024-04-29 13:23:02,715] {utils.py:315} DEBUG - 2024-04-29 13:23:02 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.191840353_191840355delinsTTT;Error from VEP for: 2:g.191840353_191840355delinsTTT | |
| [2024-04-29 13:23:02,715] {utils.py:315} DEBUG - 2024-04-29 13:23:02 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.191840353_191840356delinsTTTT;Error from VEP for: 2:g.191840353_191840356delinsTTTT | |
| [2024-04-29 13:23:02,715] {utils.py:315} DEBUG - 2024-04-29 13:23:02 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.197002061A>A;Error from VEP for: 2:g.197002061A>A | |
| [2024-04-29 13:23:02,715] {utils.py:315} DEBUG - 2024-04-29 13:23:02 [main] INFO org.cbioportal.annotator.internal.GenomeNexusImpl - On record 35500 out of 116708, annotation 30% complete | |
| [2024-04-29 13:23:02,715] {utils.py:315} DEBUG - 2024-04-29 13:23:02 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.197002245_197002247delinsTGC;Error from VEP for: 2:g.197002245_197002247delinsTGC | |
| [2024-04-29 13:23:02,715] {utils.py:315} DEBUG - 2024-04-29 13:23:02 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.197004350T>T;Error from VEP for: 2:g.197004350T>T | |
| [2024-04-29 13:23:02,715] {utils.py:315} DEBUG - 2024-04-29 13:23:02 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.197021291_197021293delinsTCT;Error from VEP for: 2:g.197021291_197021293delinsTCT | |
| [2024-04-29 13:23:02,715] {utils.py:315} DEBUG - 2024-04-29 13:23:02 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.201724708C>C;Error from VEP for: 2:g.201724708C>C | |
| [2024-04-29 13:23:02,715] {utils.py:315} DEBUG - 2024-04-29 13:23:02 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.201725035_201725042delinsATTCAGGC;Error from VEP for: 2:g.201725035_201725042delinsATTCAGGC | |
| [2024-04-29 13:23:02,715] {utils.py:315} DEBUG - 2024-04-29 13:23:02 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.201725218A>A;Error from VEP for: 2:g.201725218A>A | |
| [2024-04-29 13:23:02,715] {utils.py:315} DEBUG - 2024-04-29 13:23:02 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.202074072_202074078delinsGCCAAGG;Error from VEP for: 2:g.202074072_202074078delinsGCCAAGG | |
| [2024-04-29 13:23:02,716] {utils.py:315} DEBUG - 2024-04-29 13:23:02 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.202122902T>T;Error from VEP for: 2:g.202122902T>T | |
| [2024-04-29 13:23:02,716] {utils.py:315} DEBUG - 2024-04-29 13:23:02 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.202136290_202136292delinsTTT;Error from VEP for: 2:g.202136290_202136292delinsTTT | |
| [2024-04-29 13:23:02,716] {utils.py:315} DEBUG - 2024-04-29 13:23:02 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.202137379_202137380delinsAT;Error from VEP for: 2:g.202137379_202137380delinsAT | |
| [2024-04-29 13:23:02,716] {utils.py:315} DEBUG - 2024-04-29 13:23:02 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.202137471_202137474delinsAATC;Error from VEP for: 2:g.202137471_202137474delinsAATC | |
| [2024-04-29 13:23:02,716] {utils.py:315} DEBUG - 2024-04-29 13:23:02 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.202149799T>T;Error from VEP for: 2:g.202149799T>T | |
| [2024-04-29 13:23:02,716] {utils.py:315} DEBUG - 2024-04-29 13:23:02 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.202151192A>A;Error from VEP for: 2:g.202151192A>A | |
| [2024-04-29 13:23:02,716] {utils.py:315} DEBUG - 2024-04-29 13:23:02 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.202151350T>T;Error from VEP for: 2:g.202151350T>T | |
| [2024-04-29 13:23:02,716] {utils.py:315} DEBUG - 2024-04-29 13:23:02 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.202319488_202319492delinsGAAAG;Error from VEP for: 2:g.202319488_202319492delinsGAAAG | |
| [2024-04-29 13:23:02,716] {utils.py:315} DEBUG - 2024-04-29 13:23:02 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.202339391T>T;Error from VEP for: 2:g.202339391T>T | |
| [2024-04-29 13:23:02,716] {utils.py:315} DEBUG - 2024-04-29 13:23:02 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.202343320A>A;Error from VEP for: 2:g.202343320A>A | |
| [2024-04-29 13:23:02,716] {utils.py:315} DEBUG - 2024-04-29 13:23:02 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.202587707A>A;Error from VEP for: 2:g.202587707A>A | |
| [2024-04-29 13:23:02,716] {utils.py:315} DEBUG - 2024-04-29 13:23:02 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.202587740A>A;Error from VEP for: 2:g.202587740A>A | |
| [2024-04-29 13:23:02,716] {utils.py:315} DEBUG - 2024-04-29 13:23:02 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.202587740_202587741delinsAA;Error from VEP for: 2:g.202587740_202587741delinsAA | |
| [2024-04-29 13:23:02,716] {utils.py:315} DEBUG - 2024-04-29 13:23:02 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.202590151_202590153delinsTTG;Error from VEP for: 2:g.202590151_202590153delinsTTG | |
| [2024-04-29 13:23:02,716] {utils.py:315} DEBUG - 2024-04-29 13:23:02 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.202606468A>A;Error from VEP for: 2:g.202606468A>A | |
| [2024-04-29 13:23:02,716] {utils.py:315} DEBUG - 2024-04-29 13:23:02 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.202609085_202609087delinsATA;Error from VEP for: 2:g.202609085_202609087delinsATA | |
| [2024-04-29 13:23:02,717] {utils.py:315} DEBUG - 2024-04-29 13:23:02 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.202611413A>A;Error from VEP for: 2:g.202611413A>A | |
| [2024-04-29 13:23:02,717] {utils.py:315} DEBUG - 2024-04-29 13:23:02 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.202625982_202625984delinsTTT;Error from VEP for: 2:g.202625982_202625984delinsTTT | |
| [2024-04-29 13:23:02,717] {utils.py:315} DEBUG - 2024-04-29 13:23:02 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.202719637C>C;Error from VEP for: 2:g.202719637C>C | |
| [2024-04-29 13:23:02,717] {utils.py:315} DEBUG - 2024-04-29 13:23:02 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.203383628A>A;Error from VEP for: 2:g.203383628A>A | |
| [2024-04-29 13:23:02,717] {utils.py:315} DEBUG - 2024-04-29 13:23:02 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.203383716_203383717delinsGA;Error from VEP for: 2:g.203383716_203383717delinsGA | |
| [2024-04-29 13:23:02,717] {utils.py:315} DEBUG - 2024-04-29 13:23:02 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.203407124A>A;Error from VEP for: 2:g.203407124A>A | |
| [2024-04-29 13:23:02,717] {utils.py:315} DEBUG - 2024-04-29 13:23:02 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.203420130A>A;Error from VEP for: 2:g.203420130A>A | |
| [2024-04-29 13:23:02,717] {utils.py:315} DEBUG - 2024-04-29 13:23:02 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.203424739A>A;Error from VEP for: 2:g.203424739A>A | |
| [2024-04-29 13:23:02,717] {utils.py:315} DEBUG - 2024-04-29 13:23:02 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.204735492T>T;Error from VEP for: 2:g.204735492T>T | |
| [2024-04-29 13:23:02,717] {utils.py:315} DEBUG - 2024-04-29 13:23:02 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.204736166T>T;Error from VEP for: 2:g.204736166T>T | |
| [2024-04-29 13:23:02,717] {utils.py:315} DEBUG - 2024-04-29 13:23:02 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.208425864_208425865delinsAG;Error from VEP for: 2:g.208425864_208425865delinsAG | |
| [2024-04-29 13:23:02,717] {utils.py:315} DEBUG - 2024-04-29 13:23:02 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.209116180A>A;Error from VEP for: 2:g.209116180A>A | |
| [2024-04-29 13:23:02,717] {utils.py:315} DEBUG - 2024-04-29 13:23:02 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.209116263T>T;Error from VEP for: 2:g.209116263T>T | |
| [2024-04-29 13:23:02,717] {utils.py:315} DEBUG - 2024-04-29 13:23:02 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.212530143T>T;Error from VEP for: 2:g.212530143T>T | |
| [2024-04-29 13:23:03,718] {utils.py:315} DEBUG - 2024-04-29 13:23:02 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.216184408C>C;Error from VEP for: 2:g.216184408C>C | |
| [2024-04-29 13:23:03,718] {utils.py:315} DEBUG - 2024-04-29 13:23:02 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.216214455A>A;Error from VEP for: 2:g.216214455A>A | |
| [2024-04-29 13:23:03,718] {utils.py:315} DEBUG - 2024-04-29 13:23:02 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.216244182_216244185delinsGTAC;Error from VEP for: 2:g.216244182_216244185delinsGTAC | |
| [2024-04-29 13:23:03,718] {utils.py:315} DEBUG - 2024-04-29 13:23:03 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.216244182_216244185delinsGTAC;Error from VEP for: 2:g.216244182_216244185delinsGTAC | |
| [2024-04-29 13:23:04,524] {utils.py:315} DEBUG - 2024-04-29 13:23:03 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.216246785_216246787delinsAAG;Error from VEP for: 2:g.216246785_216246787delinsAAG | |
| [2024-04-29 13:23:04,524] {utils.py:315} DEBUG - 2024-04-29 13:23:03 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.216248175G>G;Error from VEP for: 2:g.216248175G>G | |
| [2024-04-29 13:23:04,524] {utils.py:315} DEBUG - 2024-04-29 13:23:03 [main] INFO org.cbioportal.annotator.internal.GenomeNexusImpl - On record 36000 out of 116708, annotation 30% complete | |
| [2024-04-29 13:23:04,524] {utils.py:315} DEBUG - 2024-04-29 13:23:03 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.217541461G>G;Error from VEP for: 2:g.217541461G>G | |
| [2024-04-29 13:23:04,525] {utils.py:315} DEBUG - 2024-04-29 13:23:03 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.217559379G>G;Error from VEP for: 2:g.217559379G>G | |
| [2024-04-29 13:23:04,525] {utils.py:315} DEBUG - 2024-04-29 13:23:04 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.220326765C>C;Error from VEP for: 2:g.220326765C>C | |
| [2024-04-29 13:23:04,977] {utils.py:315} DEBUG - 2024-04-29 13:23:04 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.220331951G>G;Error from VEP for: 2:g.220331951G>G | |
| [2024-04-29 13:23:04,977] {utils.py:315} DEBUG - 2024-04-29 13:23:04 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.220347922C>C;Error from VEP for: 2:g.220347922C>C | |
| [2024-04-29 13:23:04,977] {utils.py:315} DEBUG - 2024-04-29 13:23:04 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.220348876C>C;Error from VEP for: 2:g.220348876C>C | |
| [2024-04-29 13:23:04,978] {utils.py:315} DEBUG - 2024-04-29 13:23:04 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.222290624T>T;Error from VEP for: 2:g.222290624T>T | |
| [2024-04-29 13:23:04,978] {utils.py:315} DEBUG - 2024-04-29 13:23:04 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.222290624_222290625delinsTT;Error from VEP for: 2:g.222290624_222290625delinsTT | |
| [2024-04-29 13:23:04,978] {utils.py:315} DEBUG - 2024-04-29 13:23:04 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.222290668A>A;Error from VEP for: 2:g.222290668A>A | |
| [2024-04-29 13:23:04,978] {utils.py:315} DEBUG - 2024-04-29 13:23:04 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.222429083T>T;Error from VEP for: 2:g.222429083T>T | |
| [2024-04-29 13:23:04,978] {utils.py:315} DEBUG - 2024-04-29 13:23:04 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.222436986G>G;Error from VEP for: 2:g.222436986G>G | |
| [2024-04-29 13:23:04,979] {utils.py:315} DEBUG - 2024-04-29 13:23:04 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.223065754_223065755delinsAC;Error from VEP for: 2:g.223065754_223065755delinsAC | |
| [2024-04-29 13:23:04,979] {utils.py:315} DEBUG - 2024-04-29 13:23:04 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.223065754_223065757delinsACAC;Error from VEP for: 2:g.223065754_223065757delinsACAC | |
| [2024-04-29 13:23:04,979] {utils.py:315} DEBUG - 2024-04-29 13:23:04 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.223066018C>C;Error from VEP for: 2:g.223066018C>C | |
| [2024-04-29 13:23:05,599] {utils.py:315} DEBUG - 2024-04-29 13:23:04 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.223066039T>T;Error from VEP for: 2:g.223066039T>T | |
| [2024-04-29 13:23:05,600] {utils.py:315} DEBUG - 2024-04-29 13:23:04 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.223066537A>A;Error from VEP for: 2:g.223066537A>A | |
| [2024-04-29 13:23:05,600] {utils.py:315} DEBUG - 2024-04-29 13:23:04 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.223158425_223158426delinsCT;Error from VEP for: 2:g.223158425_223158426delinsCT | |
| [2024-04-29 13:23:05,600] {utils.py:315} DEBUG - 2024-04-29 13:23:04 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.223158425_223158428delinsCTCT;Error from VEP for: 2:g.223158425_223158428delinsCTCT | |
| [2024-04-29 13:23:05,600] {utils.py:315} DEBUG - 2024-04-29 13:23:04 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.223158604T>T;Error from VEP for: 2:g.223158604T>T | |
| [2024-04-29 13:23:05,600] {utils.py:315} DEBUG - 2024-04-29 13:23:04 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.223158653T>T;Error from VEP for: 2:g.223158653T>T | |
| [2024-04-29 13:23:05,600] {utils.py:315} DEBUG - 2024-04-29 13:23:05 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.223158653T>T;Error from VEP for: 2:g.223158653T>T | |
| [2024-04-29 13:23:06,773] {utils.py:315} DEBUG - 2024-04-29 13:23:05 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.227660075C>C;Error from VEP for: 2:g.227660075C>C | |
| [2024-04-29 13:23:06,773] {utils.py:315} DEBUG - 2024-04-29 13:23:05 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.227660808_227660810delinsGCT;Error from VEP for: 2:g.227660808_227660810delinsGCT | |
| [2024-04-29 13:23:06,774] {utils.py:315} DEBUG - 2024-04-29 13:23:05 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.227661341C>C;Error from VEP for: 2:g.227661341C>C | |
| [2024-04-29 13:23:06,774] {utils.py:315} DEBUG - 2024-04-29 13:23:05 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.227661396_227661398delinsTGC;Error from VEP for: 2:g.227661396_227661398delinsTGC | |
| [2024-04-29 13:23:06,774] {utils.py:315} DEBUG - 2024-04-29 13:23:05 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.227661396_227661401delinsTGCTGC;Error from VEP for: 2:g.227661396_227661401delinsTGCTGC | |
| [2024-04-29 13:23:06,774] {utils.py:315} DEBUG - 2024-04-29 13:23:05 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.227661664C>C;Error from VEP for: 2:g.227661664C>C | |
| [2024-04-29 13:23:06,774] {utils.py:315} DEBUG - 2024-04-29 13:23:05 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.227661672G>G;Error from VEP for: 2:g.227661672G>G | |
| [2024-04-29 13:23:06,774] {utils.py:315} DEBUG - 2024-04-29 13:23:05 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.227662522_227662524delinsGGT;Error from VEP for: 2:g.227662522_227662524delinsGGT | |
| [2024-04-29 13:23:06,774] {utils.py:315} DEBUG - 2024-04-29 13:23:05 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.227663094G>G;Error from VEP for: 2:g.227663094G>G | |
| [2024-04-29 13:23:06,774] {utils.py:315} DEBUG - 2024-04-29 13:23:05 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.227663336C>C;Error from VEP for: 2:g.227663336C>C | |
| [2024-04-29 13:23:06,774] {utils.py:315} DEBUG - 2024-04-29 13:23:05 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.231050821G>G;Error from VEP for: 2:g.231050821G>G | |
| [2024-04-29 13:23:06,774] {utils.py:315} DEBUG - 2024-04-29 13:23:05 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.231106184C>C;Error from VEP for: 2:g.231106184C>C | |
| [2024-04-29 13:23:06,774] {utils.py:315} DEBUG - 2024-04-29 13:23:05 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.231159025A>A;Error from VEP for: 2:g.231159025A>A | |
| [2024-04-29 13:23:06,774] {utils.py:315} DEBUG - 2024-04-29 13:23:05 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.233990484C>C;Error from VEP for: 2:g.233990484C>C | |
| [2024-04-29 13:23:06,774] {utils.py:315} DEBUG - 2024-04-29 13:23:05 [main] INFO org.cbioportal.annotator.internal.GenomeNexusImpl - On record 36500 out of 116708, annotation 31% complete | |
| [2024-04-29 13:23:06,774] {utils.py:315} DEBUG - 2024-04-29 13:23:05 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.234094532G>G;Error from VEP for: 2:g.234094532G>G | |
| [2024-04-29 13:23:06,774] {utils.py:315} DEBUG - 2024-04-29 13:23:05 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.234847688T>T;Error from VEP for: 2:g.234847688T>T | |
| [2024-04-29 13:23:06,774] {utils.py:315} DEBUG - 2024-04-29 13:23:05 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.234871949C>C;Error from VEP for: 2:g.234871949C>C | |
| [2024-04-29 13:23:06,774] {utils.py:315} DEBUG - 2024-04-29 13:23:05 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.234879010C>C;Error from VEP for: 2:g.234879010C>C | |
| [2024-04-29 13:23:06,774] {utils.py:315} DEBUG - 2024-04-29 13:23:06 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.240002823G>G;Error from VEP for: 2:g.240002823G>G | |
| [2024-04-29 13:23:07,925] {utils.py:315} DEBUG - 2024-04-29 13:23:06 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.242051701A>A;Error from VEP for: 2:g.242051701A>A | |
| [2024-04-29 13:23:07,925] {utils.py:315} DEBUG - 2024-04-29 13:23:06 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.242062279G>G;Error from VEP for: 2:g.242062279G>G | |
| [2024-04-29 13:23:07,925] {utils.py:315} DEBUG - 2024-04-29 13:23:06 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.242065751G>G;Error from VEP for: 2:g.242065751G>G | |
| [2024-04-29 13:23:07,925] {utils.py:315} DEBUG - 2024-04-29 13:23:06 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.242169327G>G;Error from VEP for: 2:g.242169327G>G | |
| [2024-04-29 13:23:07,925] {utils.py:315} DEBUG - 2024-04-29 13:23:06 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.242179467C>C;Error from VEP for: 2:g.242179467C>C | |
| [2024-04-29 13:23:07,925] {utils.py:315} DEBUG - 2024-04-29 13:23:06 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.242186472T>T;Error from VEP for: 2:g.242186472T>T | |
| [2024-04-29 13:23:07,925] {utils.py:315} DEBUG - 2024-04-29 13:23:06 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.242187454T>T;Error from VEP for: 2:g.242187454T>T | |
| [2024-04-29 13:23:07,925] {utils.py:315} DEBUG - 2024-04-29 13:23:06 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.242435243C>C;Error from VEP for: 2:g.242435243C>C | |
| [2024-04-29 13:23:07,925] {utils.py:315} DEBUG - 2024-04-29 13:23:06 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.242435659_242435662delinsAAGG;Error from VEP for: 2:g.242435659_242435662delinsAAGG | |
| [2024-04-29 13:23:07,925] {utils.py:315} DEBUG - 2024-04-29 13:23:06 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.242438136_242438138delinsAGG;Error from VEP for: 2:g.242438136_242438138delinsAGG | |
| [2024-04-29 13:23:07,925] {utils.py:315} DEBUG - 2024-04-29 13:23:06 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.242438541C>C;Error from VEP for: 2:g.242438541C>C | |
| [2024-04-29 13:23:07,925] {utils.py:315} DEBUG - 2024-04-29 13:23:06 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.242794819G>G;Error from VEP for: 2:g.242794819G>G | |
| [2024-04-29 13:23:07,925] {utils.py:315} DEBUG - 2024-04-29 13:23:06 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 2:g.242795104G>G;Error from VEP for: 2:g.242795104G>G | |
| [2024-04-29 13:23:07,925] {utils.py:315} DEBUG - 2024-04-29 13:23:06 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 20:g.464449T>T;Error from VEP for: 20:g.464449T>T | |
| [2024-04-29 13:23:07,925] {utils.py:315} DEBUG - 2024-04-29 13:23:06 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 20:g.468160G>G;Error from VEP for: 20:g.468160G>G | |
| [2024-04-29 13:23:07,925] {utils.py:315} DEBUG - 2024-04-29 13:23:06 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 20:g.1352611A>A;Error from VEP for: 20:g.1352611A>A | |
| [2024-04-29 13:23:07,925] {utils.py:315} DEBUG - 2024-04-29 13:23:06 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 20:g.1352629T>T;Error from VEP for: 20:g.1352629T>T | |
| [2024-04-29 13:23:07,925] {utils.py:315} DEBUG - 2024-04-29 13:23:07 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 20:g.9525075C>C;Error from VEP for: 20:g.9525075C>C | |
| [2024-04-29 13:23:08,846] {utils.py:315} DEBUG - 2024-04-29 13:23:07 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 20:g.10620204_10620207delinsTGTT;Error from VEP for: 20:g.10620204_10620207delinsTGTT | |
| [2024-04-29 13:23:08,846] {utils.py:315} DEBUG - 2024-04-29 13:23:07 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 20:g.10630969C>C;Error from VEP for: 20:g.10630969C>C | |
| [2024-04-29 13:23:08,846] {utils.py:315} DEBUG - 2024-04-29 13:23:07 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 20:g.30064233C>C;Error from VEP for: 20:g.30064233C>C | |
| [2024-04-29 13:23:08,846] {utils.py:315} DEBUG - 2024-04-29 13:23:07 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 20:g.30064241T>T;Error from VEP for: 20:g.30064241T>T | |
| [2024-04-29 13:23:08,846] {utils.py:315} DEBUG - 2024-04-29 13:23:07 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 20:g.30072099C>C;Error from VEP for: 20:g.30072099C>C | |
| [2024-04-29 13:23:08,846] {utils.py:315} DEBUG - 2024-04-29 13:23:07 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 20:g.30193289_30193292delinsCTGT;Error from VEP for: 20:g.30193289_30193292delinsCTGT | |
| [2024-04-29 13:23:08,846] {utils.py:315} DEBUG - 2024-04-29 13:23:07 [main] INFO org.cbioportal.annotator.internal.GenomeNexusImpl - On record 37000 out of 116708, annotation 31% complete | |
| [2024-04-29 13:23:08,846] {utils.py:315} DEBUG - 2024-04-29 13:23:07 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 20:g.30418850G>G;Error from VEP for: 20:g.30418850G>G | |
| [2024-04-29 13:23:08,847] {utils.py:315} DEBUG - 2024-04-29 13:23:07 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 20:g.30674527_30674528delinsCT;Error from VEP for: 20:g.30674527_30674528delinsCT | |
| [2024-04-29 13:23:08,847] {utils.py:315} DEBUG - 2024-04-29 13:23:07 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 20:g.31395721C>C;Error from VEP for: 20:g.31395721C>C | |
| [2024-04-29 13:23:08,847] {utils.py:315} DEBUG - 2024-04-29 13:23:07 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 20:g.31395998T>T;Error from VEP for: 20:g.31395998T>T | |
| [2024-04-29 13:23:08,847] {utils.py:315} DEBUG - 2024-04-29 13:23:07 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 20:g.33169374G>G;Error from VEP for: 20:g.33169374G>G | |
| [2024-04-29 13:23:08,847] {utils.py:315} DEBUG - 2024-04-29 13:23:07 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 20:g.35632029A>A;Error from VEP for: 20:g.35632029A>A | |
| [2024-04-29 13:23:08,847] {utils.py:315} DEBUG - 2024-04-29 13:23:07 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 20:g.35632029_35632030delinsAA;Error from VEP for: 20:g.35632029_35632030delinsAA | |
| [2024-04-29 13:23:08,847] {utils.py:315} DEBUG - 2024-04-29 13:23:07 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 20:g.35632029_35632031delinsAAA;Error from VEP for: 20:g.35632029_35632031delinsAAA | |
| [2024-04-29 13:23:08,847] {utils.py:315} DEBUG - 2024-04-29 13:23:07 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 20:g.35695259G>G;Error from VEP for: 20:g.35695259G>G | |
| [2024-04-29 13:23:08,847] {utils.py:315} DEBUG - 2024-04-29 13:23:07 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 20:g.39728799T>T;Error from VEP for: 20:g.39728799T>T | |
| [2024-04-29 13:23:08,847] {utils.py:315} DEBUG - 2024-04-29 13:23:07 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 20:g.39798114C>C;Error from VEP for: 20:g.39798114C>C | |
| [2024-04-29 13:23:08,847] {utils.py:315} DEBUG - 2024-04-29 13:23:08 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 20:g.40739003G>G;Error from VEP for: 20:g.40739003G>G | |
| [2024-04-29 13:23:09,530] {utils.py:315} DEBUG - 2024-04-29 13:23:08 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 20:g.40747109C>C;Error from VEP for: 20:g.40747109C>C | |
| [2024-04-29 13:23:09,530] {utils.py:315} DEBUG - 2024-04-29 13:23:08 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 20:g.40790090G>G;Error from VEP for: 20:g.40790090G>G | |
| [2024-04-29 13:23:09,531] {utils.py:315} DEBUG - 2024-04-29 13:23:08 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 20:g.40827959G>G;Error from VEP for: 20:g.40827959G>G | |
| [2024-04-29 13:23:09,531] {utils.py:315} DEBUG - 2024-04-29 13:23:08 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 20:g.40979337G>G;Error from VEP for: 20:g.40979337G>G | |
| [2024-04-29 13:23:09,531] {utils.py:315} DEBUG - 2024-04-29 13:23:08 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 20:g.42195014G>G;Error from VEP for: 20:g.42195014G>G | |
| [2024-04-29 13:23:09,531] {utils.py:315} DEBUG - 2024-04-29 13:23:08 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 20:g.42198075C>C;Error from VEP for: 20:g.42198075C>C | |
| [2024-04-29 13:23:09,531] {utils.py:315} DEBUG - 2024-04-29 13:23:08 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 20:g.42340215C>C;Error from VEP for: 20:g.42340215C>C | |
| [2024-04-29 13:23:09,531] {utils.py:315} DEBUG - 2024-04-29 13:23:08 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 20:g.44746914T>T;Error from VEP for: 20:g.44746914T>T | |
| [2024-04-29 13:23:09,531] {utils.py:315} DEBUG - 2024-04-29 13:23:08 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 20:g.44752007C>C;Error from VEP for: 20:g.44752007C>C | |
| [2024-04-29 13:23:09,531] {utils.py:315} DEBUG - 2024-04-29 13:23:08 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 20:g.44752028T>T;Error from VEP for: 20:g.44752028T>T | |
| [2024-04-29 13:23:09,531] {utils.py:315} DEBUG - 2024-04-29 13:23:08 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 20:g.45315440T>T;Error from VEP for: 20:g.45315440T>T | |
| [2024-04-29 13:23:09,531] {utils.py:315} DEBUG - 2024-04-29 13:23:08 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 20:g.45315634G>G;Error from VEP for: 20:g.45315634G>G | |
| [2024-04-29 13:23:09,531] {utils.py:315} DEBUG - 2024-04-29 13:23:08 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 20:g.46262816C>C;Error from VEP for: 20:g.46262816C>C | |
| [2024-04-29 13:23:09,531] {utils.py:315} DEBUG - 2024-04-29 13:23:08 [main] INFO org.cbioportal.annotator.internal.GenomeNexusImpl - On record 37500 out of 116708, annotation 32% complete | |
| [2024-04-29 13:23:09,531] {utils.py:315} DEBUG - 2024-04-29 13:23:08 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 20:g.46264693_46264694delinsCT;Error from VEP for: 20:g.46264693_46264694delinsCT | |
| [2024-04-29 13:23:09,531] {utils.py:315} DEBUG - 2024-04-29 13:23:08 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 20:g.46264985A>A;Error from VEP for: 20:g.46264985A>A | |
| [2024-04-29 13:23:09,531] {utils.py:315} DEBUG - 2024-04-29 13:23:08 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 20:g.46279815_46279823delinsGCAGCAGCA;Error from VEP for: 20:g.46279815_46279823delinsGCAGCAGCA | |
| [2024-04-29 13:23:09,531] {utils.py:315} DEBUG - 2024-04-29 13:23:08 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 20:g.46279831_46279836delinsCAGCAA;Error from VEP for: 20:g.46279831_46279836delinsCAGCAA | |
| [2024-04-29 13:23:09,531] {utils.py:315} DEBUG - 2024-04-29 13:23:08 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 20:g.46279837_46279839delinsCAG;Error from VEP for: 20:g.46279837_46279839delinsCAG | |
| [2024-04-29 13:23:09,531] {utils.py:315} DEBUG - 2024-04-29 13:23:09 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 20:g.46279837_46279839delinsCAG;Error from VEP for: 20:g.46279837_46279839delinsCAG | |
| [2024-04-29 13:23:11,504] {utils.py:315} DEBUG - 2024-04-29 13:23:09 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 20:g.46279837_46279851delinsCAGCAGCAGCAGCAG;Error from VEP for: 20:g.46279837_46279851delinsCAGCAGCAGCAGCAG | |
| [2024-04-29 13:23:11,504] {utils.py:315} DEBUG - 2024-04-29 13:23:09 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 20:g.46279858_46279866delinsCAGCAGCAA;Error from VEP for: 20:g.46279858_46279866delinsCAGCAGCAA | |
| [2024-04-29 13:23:11,504] {utils.py:315} DEBUG - 2024-04-29 13:23:09 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 20:g.46279861_46279866delinsCAGCAA;Error from VEP for: 20:g.46279861_46279866delinsCAGCAA | |
| [2024-04-29 13:23:11,504] {utils.py:315} DEBUG - 2024-04-29 13:23:09 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 20:g.46279864_46279866delinsCAA;Error from VEP for: 20:g.46279864_46279866delinsCAA | |
| [2024-04-29 13:23:11,504] {utils.py:315} DEBUG - 2024-04-29 13:23:09 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 20:g.46279864_46279878delinsCAACAGCAACAGCAA;Error from VEP for: 20:g.46279864_46279878delinsCAACAGCAACAGCAA | |
| [2024-04-29 13:23:11,504] {utils.py:315} DEBUG - 2024-04-29 13:23:09 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 20:g.46279879_46279887delinsCAGCAACAG;Error from VEP for: 20:g.46279879_46279887delinsCAGCAACAG | |
| [2024-04-29 13:23:11,504] {utils.py:315} DEBUG - 2024-04-29 13:23:09 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 20:g.46282351T>T;Error from VEP for: 20:g.46282351T>T | |
| [2024-04-29 13:23:11,504] {utils.py:315} DEBUG - 2024-04-29 13:23:09 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 20:g.46295012C>C;Error from VEP for: 20:g.46295012C>C | |
| [2024-04-29 13:23:11,504] {utils.py:315} DEBUG - 2024-04-29 13:23:09 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 20:g.46318931G>G;Error from VEP for: 20:g.46318931G>G | |
| [2024-04-29 13:23:11,504] {utils.py:315} DEBUG - 2024-04-29 13:23:09 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 20:g.46331407G>G;Error from VEP for: 20:g.46331407G>G | |
| [2024-04-29 13:23:11,504] {utils.py:315} DEBUG - 2024-04-29 13:23:09 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 20:g.46386097G>G;Error from VEP for: 20:g.46386097G>G | |
| [2024-04-29 13:23:11,504] {utils.py:315} DEBUG - 2024-04-29 13:23:09 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 20:g.46386112T>T;Error from VEP for: 20:g.46386112T>T | |
| [2024-04-29 13:23:11,504] {utils.py:315} DEBUG - 2024-04-29 13:23:09 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 20:g.52188261T>T;Error from VEP for: 20:g.52188261T>T | |
| [2024-04-29 13:23:11,504] {utils.py:315} DEBUG - 2024-04-29 13:23:09 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 20:g.52193208C>C;Error from VEP for: 20:g.52193208C>C | |
| [2024-04-29 13:23:11,504] {utils.py:315} DEBUG - 2024-04-29 13:23:09 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 20:g.52194917A>A;Error from VEP for: 20:g.52194917A>A | |
| [2024-04-29 13:23:11,504] {utils.py:315} DEBUG - 2024-04-29 13:23:09 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 20:g.52198814G>G;Error from VEP for: 20:g.52198814G>G | |
| [2024-04-29 13:23:11,504] {utils.py:315} DEBUG - 2024-04-29 13:23:09 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 20:g.52789467_52789469delinsCTT;Error from VEP for: 20:g.52789467_52789469delinsCTT | |
| [2024-04-29 13:23:11,504] {utils.py:315} DEBUG - 2024-04-29 13:23:09 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 20:g.54956539A>A;Error from VEP for: 20:g.54956539A>A | |
| [2024-04-29 13:23:11,504] {utils.py:315} DEBUG - 2024-04-29 13:23:09 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 20:g.57428975C>C;Error from VEP for: 20:g.57428975C>C | |
| [2024-04-29 13:23:11,504] {utils.py:315} DEBUG - 2024-04-29 13:23:09 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 20:g.57429035C>C;Error from VEP for: 20:g.57429035C>C | |
| [2024-04-29 13:23:11,504] {utils.py:315} DEBUG - 2024-04-29 13:23:09 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 20:g.57473929_57473930delinsTG;Error from VEP for: 20:g.57473929_57473930delinsTG | |
| [2024-04-29 13:23:11,504] {utils.py:315} DEBUG - 2024-04-29 13:23:09 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 20:g.57484580T>T;Error from VEP for: 20:g.57484580T>T | |
| [2024-04-29 13:23:11,504] {utils.py:315} DEBUG - 2024-04-29 13:23:09 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 20:g.60737906T>T;Error from VEP for: 20:g.60737906T>T | |
| [2024-04-29 13:23:11,505] {utils.py:315} DEBUG - 2024-04-29 13:23:09 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 20:g.60737926G>G;Error from VEP for: 20:g.60737926G>G | |
| [2024-04-29 13:23:11,505] {utils.py:315} DEBUG - 2024-04-29 13:23:09 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 20:g.60754484_60754488delinsGTATT;Error from VEP for: 20:g.60754484_60754488delinsGTATT | |
| [2024-04-29 13:23:11,505] {utils.py:315} DEBUG - 2024-04-29 13:23:09 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 20:g.60754515T>T;Error from VEP for: 20:g.60754515T>T | |
| [2024-04-29 13:23:11,505] {utils.py:315} DEBUG - 2024-04-29 13:23:11 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 20:g.61297778_61297780delinsCTT;Error from VEP for: 20:g.61297778_61297780delinsCTT | |
| [2024-04-29 13:23:12,207] {utils.py:315} DEBUG - 2024-04-29 13:23:11 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 20:g.61391688C>C;Error from VEP for: 20:g.61391688C>C | |
| [2024-04-29 13:23:12,207] {utils.py:315} DEBUG - 2024-04-29 13:23:11 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 20:g.62161351C>C;Error from VEP for: 20:g.62161351C>C | |
| [2024-04-29 13:23:12,207] {utils.py:315} DEBUG - 2024-04-29 13:23:11 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 20:g.62164170C>C;Error from VEP for: 20:g.62164170C>C | |
| [2024-04-29 13:23:12,207] {utils.py:315} DEBUG - 2024-04-29 13:23:11 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 20:g.62174799G>G;Error from VEP for: 20:g.62174799G>G | |
| [2024-04-29 13:23:12,207] {utils.py:315} DEBUG - 2024-04-29 13:23:11 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 20:g.62178771_62178773delinsAGA;Error from VEP for: 20:g.62178771_62178773delinsAGA | |
| [2024-04-29 13:23:12,207] {utils.py:315} DEBUG - 2024-04-29 13:23:11 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 20:g.62839333_62839335delinsGAG;Error from VEP for: 20:g.62839333_62839335delinsGAG | |
| [2024-04-29 13:23:12,207] {utils.py:315} DEBUG - 2024-04-29 13:23:11 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 20:g.62839354_62839356delinsGAG;Error from VEP for: 20:g.62839354_62839356delinsGAG | |
| [2024-04-29 13:23:12,207] {utils.py:315} DEBUG - 2024-04-29 13:23:11 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 20:g.62839393_62839407delinsGAGGAGGAAGAGGAA;Error from VEP for: 20:g.62839393_62839407delinsGAGGAGGAAGAGGAA | |
| [2024-04-29 13:23:12,207] {utils.py:315} DEBUG - 2024-04-29 13:23:11 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 20:g.62839408_62839410delinsGAG;Error from VEP for: 20:g.62839408_62839410delinsGAG | |
| [2024-04-29 13:23:12,207] {utils.py:315} DEBUG - 2024-04-29 13:23:11 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 20:g.62839417_62839422delinsGAGGAA;Error from VEP for: 20:g.62839417_62839422delinsGAGGAA | |
| [2024-04-29 13:23:12,207] {utils.py:315} DEBUG - 2024-04-29 13:23:11 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 20:g.62839435_62839440delinsGAGGAA;Error from VEP for: 20:g.62839435_62839440delinsGAGGAA | |
| [2024-04-29 13:23:12,208] {utils.py:315} DEBUG - 2024-04-29 13:23:11 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 20:g.62839453_62839455delinsGAG;Error from VEP for: 20:g.62839453_62839455delinsGAG | |
| [2024-04-29 13:23:12,208] {utils.py:315} DEBUG - 2024-04-29 13:23:11 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 20:g.62859240_62859243delinsGCTT;Error from VEP for: 20:g.62859240_62859243delinsGCTT | |
| [2024-04-29 13:23:12,208] {utils.py:315} DEBUG - 2024-04-29 13:23:11 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 21:g.30909646T>T;Error from VEP for: 21:g.30909646T>T | |
| [2024-04-29 13:23:12,208] {utils.py:315} DEBUG - 2024-04-29 13:23:11 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 21:g.30959780C>C;Error from VEP for: 21:g.30959780C>C | |
| [2024-04-29 13:23:12,208] {utils.py:315} DEBUG - 2024-04-29 13:23:11 [main] INFO org.cbioportal.annotator.internal.GenomeNexusImpl - On record 38000 out of 116708, annotation 32% complete | |
| [2024-04-29 13:23:12,208] {utils.py:315} DEBUG - 2024-04-29 13:23:11 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 21:g.32508286C>C;Error from VEP for: 21:g.32508286C>C | |
| [2024-04-29 13:23:12,208] {utils.py:315} DEBUG - 2024-04-29 13:23:11 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 21:g.32537324_32537334delinsCTCGGTCTCCT;Error from VEP for: 21:g.32537324_32537334delinsCTCGGTCTCCT | |
| [2024-04-29 13:23:12,208] {utils.py:315} DEBUG - 2024-04-29 13:23:11 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 21:g.32595721C>C;Error from VEP for: 21:g.32595721C>C | |
| [2024-04-29 13:23:12,208] {utils.py:315} DEBUG - 2024-04-29 13:23:11 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 21:g.32639025G>G;Error from VEP for: 21:g.32639025G>G | |
| [2024-04-29 13:23:12,208] {utils.py:315} DEBUG - 2024-04-29 13:23:11 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 21:g.33368251C>C;Error from VEP for: 21:g.33368251C>C | |
| [2024-04-29 13:23:12,208] {utils.py:315} DEBUG - 2024-04-29 13:23:11 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 21:g.36171736_36171740delinsGGGAT;Error from VEP for: 21:g.36171736_36171740delinsGGGAT | |
| [2024-04-29 13:23:12,208] {utils.py:315} DEBUG - 2024-04-29 13:23:11 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 21:g.36421367A>A;Error from VEP for: 21:g.36421367A>A | |
| [2024-04-29 13:23:12,208] {utils.py:315} DEBUG - 2024-04-29 13:23:11 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 21:g.36421413A>A;Error from VEP for: 21:g.36421413A>A | |
| [2024-04-29 13:23:12,208] {utils.py:315} DEBUG - 2024-04-29 13:23:11 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 21:g.38884884T>T;Error from VEP for: 21:g.38884884T>T | |
| [2024-04-29 13:23:12,208] {utils.py:315} DEBUG - 2024-04-29 13:23:12 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 21:g.38884967T>T;Error from VEP for: 21:g.38884967T>T | |
| [2024-04-29 13:23:12,758] {utils.py:315} DEBUG - 2024-04-29 13:23:12 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 21:g.39755554G>G;Error from VEP for: 21:g.39755554G>G | |
| [2024-04-29 13:23:12,759] {utils.py:315} DEBUG - 2024-04-29 13:23:12 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 21:g.42837952G>G;Error from VEP for: 21:g.42837952G>G | |
| [2024-04-29 13:23:12,759] {utils.py:315} DEBUG - 2024-04-29 13:23:12 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 21:g.42851110T>T;Error from VEP for: 21:g.42851110T>T | |
| [2024-04-29 13:23:12,759] {utils.py:315} DEBUG - 2024-04-29 13:23:12 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 21:g.43176840_43176847delinsGCTTTTCC;Error from VEP for: 21:g.43176840_43176847delinsGCTTTTCC | |
| [2024-04-29 13:23:12,759] {utils.py:315} DEBUG - 2024-04-29 13:23:12 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 21:g.46875923C>C;Error from VEP for: 21:g.46875923C>C | |
| [2024-04-29 13:23:12,759] {utils.py:315} DEBUG - 2024-04-29 13:23:12 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 21:g.46900038C>C;Error from VEP for: 21:g.46900038C>C | |
| [2024-04-29 13:23:12,759] {utils.py:315} DEBUG - 2024-04-29 13:23:12 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 21:g.46916425C>C;Error from VEP for: 21:g.46916425C>C | |
| [2024-04-29 13:23:12,759] {utils.py:315} DEBUG - 2024-04-29 13:23:12 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 21:g.46923943_46923945delinsTTC;Error from VEP for: 21:g.46923943_46923945delinsTTC | |
| [2024-04-29 13:23:12,759] {utils.py:315} DEBUG - 2024-04-29 13:23:12 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 21:g.46925141_46925149delinsGGCCCCCCA;Error from VEP for: 21:g.46925141_46925149delinsGGCCCCCCA | |
| [2024-04-29 13:23:12,759] {utils.py:315} DEBUG - 2024-04-29 13:23:12 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 21:g.46925298_46925306delinsCCCCCTGGG;Error from VEP for: 21:g.46925298_46925306delinsCCCCCTGGG | |
| [2024-04-29 13:23:12,759] {utils.py:315} DEBUG - 2024-04-29 13:23:12 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 21:g.47655133A>A;Error from VEP for: 21:g.47655133A>A | |
| [2024-04-29 13:23:12,759] {utils.py:315} DEBUG - 2024-04-29 13:23:12 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 21:g.47663397G>G;Error from VEP for: 21:g.47663397G>G | |
| [2024-04-29 13:23:12,759] {utils.py:315} DEBUG - 2024-04-29 13:23:12 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 21:g.47666951_47666968delinsCCTGTAGTTATCTTACTT;Error from VEP for: 21:g.47666951_47666968delinsCCTGTAGTTATCTTACTT | |
| [2024-04-29 13:23:12,759] {utils.py:315} DEBUG - 2024-04-29 13:23:12 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 21:g.47667038T>T;Error from VEP for: 21:g.47667038T>T | |
| [2024-04-29 13:23:12,759] {utils.py:315} DEBUG - 2024-04-29 13:23:12 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 21:g.47704116T>T;Error from VEP for: 21:g.47704116T>T | |
| [2024-04-29 13:23:13,129] {utils.py:315} DEBUG - 2024-04-29 13:23:12 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 21:g.47704276C>C;Error from VEP for: 21:g.47704276C>C | |
| [2024-04-29 13:23:13,130] {utils.py:315} DEBUG - 2024-04-29 13:23:12 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 21:g.47705090_47705092delinsAGA;Error from VEP for: 21:g.47705090_47705092delinsAGA | |
| [2024-04-29 13:23:13,130] {utils.py:315} DEBUG - 2024-04-29 13:23:12 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 22:g.18256409C>C;Error from VEP for: 22:g.18256409C>C | |
| [2024-04-29 13:23:13,130] {utils.py:315} DEBUG - 2024-04-29 13:23:12 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 22:g.19118788_19118789delinsCT;Error from VEP for: 22:g.19118788_19118789delinsCT | |
| [2024-04-29 13:23:13,130] {utils.py:315} DEBUG - 2024-04-29 13:23:12 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 22:g.19119732C>C;Error from VEP for: 22:g.19119732C>C | |
| [2024-04-29 13:23:13,130] {utils.py:315} DEBUG - 2024-04-29 13:23:12 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 22:g.19171000_19171009delinsAGCAGGTCAT;Error from VEP for: 22:g.19171000_19171009delinsAGCAGGTCAT | |
| [2024-04-29 13:23:13,130] {utils.py:315} DEBUG - 2024-04-29 13:23:13 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 22:g.19195739A>A;Error from VEP for: 22:g.19195739A>A | |
| [2024-04-29 13:23:14,000] {utils.py:315} DEBUG - 2024-04-29 13:23:13 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 22:g.19196833_19196834delinsAG;Error from VEP for: 22:g.19196833_19196834delinsAG | |
| [2024-04-29 13:23:14,000] {utils.py:315} DEBUG - 2024-04-29 13:23:13 [main] INFO org.cbioportal.annotator.internal.GenomeNexusImpl - On record 38500 out of 116708, annotation 32% complete | |
| [2024-04-29 13:23:14,000] {utils.py:315} DEBUG - 2024-04-29 13:23:13 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 22:g.19226837A>A;Error from VEP for: 22:g.19226837A>A | |
| [2024-04-29 13:23:14,000] {utils.py:315} DEBUG - 2024-04-29 13:23:14 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 22:g.19709595C>C;Error from VEP for: 22:g.19709595C>C | |
| [2024-04-29 13:23:14,550] {utils.py:315} DEBUG - 2024-04-29 13:23:14 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 22:g.21105629G>G;Error from VEP for: 22:g.21105629G>G | |
| [2024-04-29 13:23:14,550] {utils.py:315} DEBUG - 2024-04-29 13:23:14 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 22:g.21153431G>G;Error from VEP for: 22:g.21153431G>G | |
| [2024-04-29 13:23:14,550] {utils.py:315} DEBUG - 2024-04-29 13:23:14 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 22:g.21159300C>C;Error from VEP for: 22:g.21159300C>C | |
| [2024-04-29 13:23:14,550] {utils.py:315} DEBUG - 2024-04-29 13:23:14 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 22:g.21172812G>G;Error from VEP for: 22:g.21172812G>G | |
| [2024-04-29 13:23:14,550] {utils.py:315} DEBUG - 2024-04-29 13:23:14 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 22:g.21288396_21288398delinsCTC;Error from VEP for: 22:g.21288396_21288398delinsCTC | |
| [2024-04-29 13:23:14,550] {utils.py:315} DEBUG - 2024-04-29 13:23:14 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 22:g.21333749_21333752delinsCTAT;Error from VEP for: 22:g.21333749_21333752delinsCTAT | |
| [2024-04-29 13:23:14,550] {utils.py:315} DEBUG - 2024-04-29 13:23:14 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 22:g.21335399_21335400delinsCA;Error from VEP for: 22:g.21335399_21335400delinsCA | |
| [2024-04-29 13:23:14,550] {utils.py:315} DEBUG - 2024-04-29 13:23:14 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 22:g.21346079C>C;Error from VEP for: 22:g.21346079C>C | |
| [2024-04-29 13:23:14,550] {utils.py:315} DEBUG - 2024-04-29 13:23:14 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 22:g.22890533_22890535delinsAGA;Error from VEP for: 22:g.22890533_22890535delinsAGA | |
| [2024-04-29 13:23:14,550] {utils.py:315} DEBUG - 2024-04-29 13:23:14 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 22:g.23631811G>G;Error from VEP for: 22:g.23631811G>G | |
| [2024-04-29 13:23:14,550] {utils.py:315} DEBUG - 2024-04-29 13:23:14 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 22:g.23631814C>C;Error from VEP for: 22:g.23631814C>C | |
| [2024-04-29 13:23:15,700] {utils.py:315} DEBUG - 2024-04-29 13:23:14 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 22:g.24034550C>C;Error from VEP for: 22:g.24034550C>C | |
| [2024-04-29 13:23:15,700] {utils.py:315} DEBUG - 2024-04-29 13:23:14 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 22:g.24145522_24145523delinsTC;Error from VEP for: 22:g.24145522_24145523delinsTC | |
| [2024-04-29 13:23:15,700] {utils.py:315} DEBUG - 2024-04-29 13:23:14 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 22:g.26114297T>T;Error from VEP for: 22:g.26114297T>T | |
| [2024-04-29 13:23:15,700] {utils.py:315} DEBUG - 2024-04-29 13:23:14 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 22:g.26164298A>A;Error from VEP for: 22:g.26164298A>A | |
| [2024-04-29 13:23:15,700] {utils.py:315} DEBUG - 2024-04-29 13:23:14 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 22:g.28193004C>C;Error from VEP for: 22:g.28193004C>C | |
| [2024-04-29 13:23:15,700] {utils.py:315} DEBUG - 2024-04-29 13:23:14 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 22:g.28193569C>C;Error from VEP for: 22:g.28193569C>C | |
| [2024-04-29 13:23:15,700] {utils.py:315} DEBUG - 2024-04-29 13:23:14 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 22:g.28194102_28194103delinsGA;Error from VEP for: 22:g.28194102_28194103delinsGA | |
| [2024-04-29 13:23:15,700] {utils.py:315} DEBUG - 2024-04-29 13:23:14 [main] INFO org.cbioportal.annotator.internal.GenomeNexusImpl - On record 39000 out of 116708, annotation 33% complete | |
| [2024-04-29 13:23:15,700] {utils.py:315} DEBUG - 2024-04-29 13:23:14 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 22:g.28194769C>C;Error from VEP for: 22:g.28194769C>C | |
| [2024-04-29 13:23:15,700] {utils.py:315} DEBUG - 2024-04-29 13:23:14 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 22:g.28194895_28194900delinsTGCTGT;Error from VEP for: 22:g.28194895_28194900delinsTGCTGT | |
| [2024-04-29 13:23:15,700] {utils.py:315} DEBUG - 2024-04-29 13:23:14 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 22:g.28194934_28194936delinsTGC;Error from VEP for: 22:g.28194934_28194936delinsTGC | |
| [2024-04-29 13:23:15,700] {utils.py:315} DEBUG - 2024-04-29 13:23:14 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 22:g.28196286C>C;Error from VEP for: 22:g.28196286C>C | |
| [2024-04-29 13:23:15,700] {utils.py:315} DEBUG - 2024-04-29 13:23:14 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 22:g.29083809A>A;Error from VEP for: 22:g.29083809A>A | |
| [2024-04-29 13:23:15,700] {utils.py:315} DEBUG - 2024-04-29 13:23:14 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 22:g.29091227A>A;Error from VEP for: 22:g.29091227A>A | |
| [2024-04-29 13:23:15,700] {utils.py:315} DEBUG - 2024-04-29 13:23:15 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 22:g.29121281T>T;Error from VEP for: 22:g.29121281T>T | |
| [2024-04-29 13:23:16,964] {utils.py:315} DEBUG - 2024-04-29 13:23:15 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 22:g.29674037C>C;Error from VEP for: 22:g.29674037C>C | |
| [2024-04-29 13:23:16,964] {utils.py:315} DEBUG - 2024-04-29 13:23:15 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 22:g.29687622A>A;Error from VEP for: 22:g.29687622A>A | |
| [2024-04-29 13:23:16,964] {utils.py:315} DEBUG - 2024-04-29 13:23:15 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 22:g.29687622_29687623delinsAA;Error from VEP for: 22:g.29687622_29687623delinsAA | |
| [2024-04-29 13:23:16,964] {utils.py:315} DEBUG - 2024-04-29 13:23:15 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 22:g.29695765G>G;Error from VEP for: 22:g.29695765G>G | |
| [2024-04-29 13:23:16,964] {utils.py:315} DEBUG - 2024-04-29 13:23:15 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 22:g.29696337T>T;Error from VEP for: 22:g.29696337T>T | |
| [2024-04-29 13:23:16,964] {utils.py:315} DEBUG - 2024-04-29 13:23:15 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 22:g.30050663_30050664delinsCA;Error from VEP for: 22:g.30050663_30050664delinsCA | |
| [2024-04-29 13:23:16,964] {utils.py:315} DEBUG - 2024-04-29 13:23:15 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 22:g.30050708A>A;Error from VEP for: 22:g.30050708A>A | |
| [2024-04-29 13:23:16,964] {utils.py:315} DEBUG - 2024-04-29 13:23:15 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 22:g.30057197A>A;Error from VEP for: 22:g.30057197A>A | |
| [2024-04-29 13:23:16,964] {utils.py:315} DEBUG - 2024-04-29 13:23:15 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 22:g.30057286C>C;Error from VEP for: 22:g.30057286C>C | |
| [2024-04-29 13:23:16,964] {utils.py:315} DEBUG - 2024-04-29 13:23:15 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 22:g.30060991C>C;Error from VEP for: 22:g.30060991C>C | |
| [2024-04-29 13:23:16,964] {utils.py:315} DEBUG - 2024-04-29 13:23:15 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 22:g.30074194_30074203delinsCCAATTCCAG;Error from VEP for: 22:g.30074194_30074203delinsCCAATTCCAG | |
| [2024-04-29 13:23:16,964] {utils.py:315} DEBUG - 2024-04-29 13:23:15 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 22:g.30079072_30079073delinsCT;Error from VEP for: 22:g.30079072_30079073delinsCT | |
| [2024-04-29 13:23:16,964] {utils.py:315} DEBUG - 2024-04-29 13:23:15 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 22:g.31672777C>C;Error from VEP for: 22:g.31672777C>C | |
| [2024-04-29 13:23:16,964] {utils.py:315} DEBUG - 2024-04-29 13:23:15 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 22:g.31722929_31722931delinsGAT;Error from VEP for: 22:g.31722929_31722931delinsGAT | |
| [2024-04-29 13:23:16,964] {utils.py:315} DEBUG - 2024-04-29 13:23:15 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 22:g.31741067G>G;Error from VEP for: 22:g.31741067G>G | |
| [2024-04-29 13:23:16,964] {utils.py:315} DEBUG - 2024-04-29 13:23:15 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 22:g.32352855_32352856delinsAA;Error from VEP for: 22:g.32352855_32352856delinsAA | |
| [2024-04-29 13:23:16,964] {utils.py:315} DEBUG - 2024-04-29 13:23:15 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 22:g.33255324C>C;Error from VEP for: 22:g.33255324C>C | |
| [2024-04-29 13:23:16,964] {utils.py:315} DEBUG - 2024-04-29 13:23:15 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 22:g.36682803_36682805delinsCTT;Error from VEP for: 22:g.36682803_36682805delinsCTT | |
| [2024-04-29 13:23:16,965] {utils.py:315} DEBUG - 2024-04-29 13:23:15 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 22:g.36685266_36685268delinsCTT;Error from VEP for: 22:g.36685266_36685268delinsCTT | |
| [2024-04-29 13:23:16,965] {utils.py:315} DEBUG - 2024-04-29 13:23:15 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 22:g.36688174_36688176delinsTGC;Error from VEP for: 22:g.36688174_36688176delinsTGC | |
| [2024-04-29 13:23:16,965] {utils.py:315} DEBUG - 2024-04-29 13:23:15 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 22:g.36690293C>C;Error from VEP for: 22:g.36690293C>C | |
| [2024-04-29 13:23:16,965] {utils.py:315} DEBUG - 2024-04-29 13:23:15 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 22:g.36690310A>A;Error from VEP for: 22:g.36690310A>A | |
| [2024-04-29 13:23:16,965] {utils.py:315} DEBUG - 2024-04-29 13:23:15 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 22:g.36698721_36698722delinsCT;Error from VEP for: 22:g.36698721_36698722delinsCT | |
| [2024-04-29 13:23:16,965] {utils.py:315} DEBUG - 2024-04-29 13:23:15 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 22:g.36702074_36702091delinsGAGATGCGGGTCCAGCTT;Error from VEP for: 22:g.36702074_36702091delinsGAGATGCGGGTCCAGCTT | |
| [2024-04-29 13:23:16,965] {utils.py:315} DEBUG - 2024-04-29 13:23:15 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 22:g.36708203_36708204delinsTT;Error from VEP for: 22:g.36708203_36708204delinsTT | |
| [2024-04-29 13:23:16,965] {utils.py:315} DEBUG - 2024-04-29 13:23:15 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 22:g.36708257G>G;Error from VEP for: 22:g.36708257G>G | |
| [2024-04-29 13:23:16,965] {utils.py:315} DEBUG - 2024-04-29 13:23:15 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 22:g.36716380T>T;Error from VEP for: 22:g.36716380T>T | |
| [2024-04-29 13:23:16,965] {utils.py:315} DEBUG - 2024-04-29 13:23:15 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 22:g.37906309_37906314delinsCTCCTT;Error from VEP for: 22:g.37906309_37906314delinsCTCCTT | |
| [2024-04-29 13:23:16,965] {utils.py:315} DEBUG - 2024-04-29 13:23:15 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 22:g.37912022_37912024delinsCTC;Error from VEP for: 22:g.37912022_37912024delinsCTC | |
| [2024-04-29 13:23:16,965] {utils.py:315} DEBUG - 2024-04-29 13:23:16 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 22:g.39621705_39621706delinsCA;Error from VEP for: 22:g.39621705_39621706delinsCA | |
| [2024-04-29 13:23:17,827] {utils.py:315} DEBUG - 2024-04-29 13:23:16 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 22:g.39636900_39636901delinsTC;Error from VEP for: 22:g.39636900_39636901delinsTC | |
| [2024-04-29 13:23:17,827] {utils.py:315} DEBUG - 2024-04-29 13:23:16 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 22:g.40574007_40574008delinsTC;Error from VEP for: 22:g.40574007_40574008delinsTC | |
| [2024-04-29 13:23:17,827] {utils.py:315} DEBUG - 2024-04-29 13:23:16 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 22:g.40660740G>G;Error from VEP for: 22:g.40660740G>G | |
| [2024-04-29 13:23:17,827] {utils.py:315} DEBUG - 2024-04-29 13:23:16 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 22:g.40661866C>C;Error from VEP for: 22:g.40661866C>C | |
| [2024-04-29 13:23:17,828] {utils.py:315} DEBUG - 2024-04-29 13:23:16 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 22:g.40662480G>G;Error from VEP for: 22:g.40662480G>G | |
| [2024-04-29 13:23:17,828] {utils.py:315} DEBUG - 2024-04-29 13:23:16 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 22:g.40662617G>G;Error from VEP for: 22:g.40662617G>G | |
| [2024-04-29 13:23:17,828] {utils.py:315} DEBUG - 2024-04-29 13:23:16 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 22:g.40662764C>C;Error from VEP for: 22:g.40662764C>C | |
| [2024-04-29 13:23:17,828] {utils.py:315} DEBUG - 2024-04-29 13:23:16 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 22:g.40669453G>G;Error from VEP for: 22:g.40669453G>G | |
| [2024-04-29 13:23:17,828] {utils.py:315} DEBUG - 2024-04-29 13:23:16 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 22:g.40696458G>G;Error from VEP for: 22:g.40696458G>G | |
| [2024-04-29 13:23:17,828] {utils.py:315} DEBUG - 2024-04-29 13:23:16 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 22:g.40697177_40697179delinsGCA;Error from VEP for: 22:g.40697177_40697179delinsGCA | |
| [2024-04-29 13:23:17,828] {utils.py:315} DEBUG - 2024-04-29 13:23:16 [main] INFO org.cbioportal.annotator.internal.GenomeNexusImpl - On record 39500 out of 116708, annotation 33% complete | |
| [2024-04-29 13:23:17,828] {utils.py:315} DEBUG - 2024-04-29 13:23:16 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 22:g.40706848G>G;Error from VEP for: 22:g.40706848G>G | |
| [2024-04-29 13:23:17,828] {utils.py:315} DEBUG - 2024-04-29 13:23:16 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 22:g.40718944_40718950delinsCACCTGC;Error from VEP for: 22:g.40718944_40718950delinsCACCTGC | |
| [2024-04-29 13:23:17,828] {utils.py:315} DEBUG - 2024-04-29 13:23:16 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 22:g.40807831G>G;Error from VEP for: 22:g.40807831G>G | |
| [2024-04-29 13:23:17,828] {utils.py:315} DEBUG - 2024-04-29 13:23:16 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 22:g.40814900C>C;Error from VEP for: 22:g.40814900C>C | |
| [2024-04-29 13:23:17,828] {utils.py:315} DEBUG - 2024-04-29 13:23:16 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 22:g.40816494G>G;Error from VEP for: 22:g.40816494G>G | |
| [2024-04-29 13:23:17,828] {utils.py:315} DEBUG - 2024-04-29 13:23:16 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 22:g.41522009A>A;Error from VEP for: 22:g.41522009A>A | |
| [2024-04-29 13:23:17,828] {utils.py:315} DEBUG - 2024-04-29 13:23:16 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 22:g.41527444_41527446delinsGGG;Error from VEP for: 22:g.41527444_41527446delinsGGG | |
| [2024-04-29 13:23:17,828] {utils.py:315} DEBUG - 2024-04-29 13:23:16 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 22:g.41545952_41545954delinsCAA;Error from VEP for: 22:g.41545952_41545954delinsCAA | |
| [2024-04-29 13:23:17,828] {utils.py:315} DEBUG - 2024-04-29 13:23:16 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 22:g.41547916C>C;Error from VEP for: 22:g.41547916C>C | |
| [2024-04-29 13:23:17,828] {utils.py:315} DEBUG - 2024-04-29 13:23:16 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 22:g.41566508_41566512delinsGACTG;Error from VEP for: 22:g.41566508_41566512delinsGACTG | |
| [2024-04-29 13:23:17,828] {utils.py:315} DEBUG - 2024-04-29 13:23:16 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 22:g.41566525A>A;Error from VEP for: 22:g.41566525A>A | |
| [2024-04-29 13:23:17,828] {utils.py:315} DEBUG - 2024-04-29 13:23:16 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 22:g.41568504A>A;Error from VEP for: 22:g.41568504A>A | |
| [2024-04-29 13:23:17,828] {utils.py:315} DEBUG - 2024-04-29 13:23:16 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 22:g.41569645A>A;Error from VEP for: 22:g.41569645A>A | |
| [2024-04-29 13:23:17,828] {utils.py:315} DEBUG - 2024-04-29 13:23:16 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 22:g.41572902T>T;Error from VEP for: 22:g.41572902T>T | |
| [2024-04-29 13:23:17,828] {utils.py:315} DEBUG - 2024-04-29 13:23:16 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 22:g.41574341_41574352delinsACCAGTTCCAGC;Error from VEP for: 22:g.41574341_41574352delinsACCAGTTCCAGC | |
| [2024-04-29 13:23:17,828] {utils.py:315} DEBUG - 2024-04-29 13:23:16 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 22:g.41574679C>C;Error from VEP for: 22:g.41574679C>C | |
| [2024-04-29 13:23:17,828] {utils.py:315} DEBUG - 2024-04-29 13:23:16 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 22:g.41574970_41574972delinsGTA;Error from VEP for: 22:g.41574970_41574972delinsGTA | |
| [2024-04-29 13:23:17,828] {utils.py:315} DEBUG - 2024-04-29 13:23:17 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 22:g.41574970_41574972delinsGTA;Error from VEP for: 22:g.41574970_41574972delinsGTA | |
| [2024-04-29 13:23:18,462] {utils.py:315} DEBUG - 2024-04-29 13:23:17 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 22:g.41575059_41575060delinsAC;Error from VEP for: 22:g.41575059_41575060delinsAC | |
| [2024-04-29 13:23:18,463] {utils.py:315} DEBUG - 2024-04-29 13:23:17 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 22:g.42390888_42390889delinsTG;Error from VEP for: 22:g.42390888_42390889delinsTG | |
| [2024-04-29 13:23:18,463] {utils.py:315} DEBUG - 2024-04-29 13:23:17 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 22:g.42390888_42390891delinsTGTG;Error from VEP for: 22:g.42390888_42390891delinsTGTG | |
| [2024-04-29 13:23:18,463] {utils.py:315} DEBUG - 2024-04-29 13:23:17 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 22:g.42390888_42390895delinsTGTGTGTG;Error from VEP for: 22:g.42390888_42390895delinsTGTGTGTG | |
| [2024-04-29 13:23:18,463] {utils.py:315} DEBUG - 2024-04-29 13:23:17 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 22:g.43525245_43525253delinsGCTGCTGCT;Error from VEP for: 22:g.43525245_43525253delinsGCTGCTGCT | |
| [2024-04-29 13:23:18,463] {utils.py:315} DEBUG - 2024-04-29 13:23:17 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 22:g.43525262_43525273delinsCGCTGCTGCTGC;Error from VEP for: 22:g.43525262_43525273delinsCGCTGCTGCTGC | |
| [2024-04-29 13:23:18,463] {utils.py:315} DEBUG - 2024-04-29 13:23:17 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 22:g.45732267A>A;Error from VEP for: 22:g.45732267A>A | |
| [2024-04-29 13:23:18,463] {utils.py:315} DEBUG - 2024-04-29 13:23:17 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 22:g.45736297G>G;Error from VEP for: 22:g.45736297G>G | |
| [2024-04-29 13:23:18,463] {utils.py:315} DEBUG - 2024-04-29 13:23:17 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 22:g.46631153A>A;Error from VEP for: 22:g.46631153A>A | |
| [2024-04-29 13:23:18,463] {utils.py:315} DEBUG - 2024-04-29 13:23:17 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 22:g.46712114C>C;Error from VEP for: 22:g.46712114C>C | |
| [2024-04-29 13:23:18,463] {utils.py:315} DEBUG - 2024-04-29 13:23:17 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 22:g.46712300T>T;Error from VEP for: 22:g.46712300T>T | |
| [2024-04-29 13:23:18,463] {utils.py:315} DEBUG - 2024-04-29 13:23:17 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 22:g.46722670_46722673delinsGTTT;Error from VEP for: 22:g.46722670_46722673delinsGTTT | |
| [2024-04-29 13:23:18,463] {utils.py:315} DEBUG - 2024-04-29 13:23:17 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 22:g.46722675_46722679delinsTTTGT;Error from VEP for: 22:g.46722675_46722679delinsTTTGT | |
| [2024-04-29 13:23:18,463] {utils.py:315} DEBUG - 2024-04-29 13:23:17 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 22:g.46722679T>T;Error from VEP for: 22:g.46722679T>T | |
| [2024-04-29 13:23:18,463] {utils.py:315} DEBUG - 2024-04-29 13:23:17 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 22:g.50693505C>C;Error from VEP for: 22:g.50693505C>C | |
| [2024-04-29 13:23:18,463] {utils.py:315} DEBUG - 2024-04-29 13:23:17 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 22:g.50693576_50693610delinsGAGCCCCCCACTTGGGTCCACACAGGCCGTGCCAG;Error from VEP for: 22:g.50693576_50693610delinsGAGCCCCCCACTTGGGTCCACACAGGCCGTGCCAG | |
| [2024-04-29 13:23:18,463] {utils.py:315} DEBUG - 2024-04-29 13:23:17 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 22:g.50704060G>G;Error from VEP for: 22:g.50704060G>G | |
| [2024-04-29 13:23:18,463] {utils.py:315} DEBUG - 2024-04-29 13:23:17 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 22:g.50704784C>C;Error from VEP for: 22:g.50704784C>C | |
| [2024-04-29 13:23:18,463] {utils.py:315} DEBUG - 2024-04-29 13:23:17 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 22:g.51045156G>G;Error from VEP for: 22:g.51045156G>G | |
| [2024-04-29 13:23:18,463] {utils.py:315} DEBUG - 2024-04-29 13:23:17 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 3:g.1262422T>T;Error from VEP for: 3:g.1262422T>T | |
| [2024-04-29 13:23:18,463] {utils.py:315} DEBUG - 2024-04-29 13:23:18 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 3:g.1339681_1339686delinsGTTTTT;Error from VEP for: 3:g.1339681_1339686delinsGTTTTT | |
| [2024-04-29 13:23:19,847] {utils.py:315} DEBUG - 2024-04-29 13:23:18 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 3:g.1339718T>T;Error from VEP for: 3:g.1339718T>T | |
| [2024-04-29 13:23:19,847] {utils.py:315} DEBUG - 2024-04-29 13:23:18 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 3:g.1367608A>A;Error from VEP for: 3:g.1367608A>A | |
| [2024-04-29 13:23:19,848] {utils.py:315} DEBUG - 2024-04-29 13:23:18 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 3:g.1371501A>A;Error from VEP for: 3:g.1371501A>A | |
| [2024-04-29 13:23:19,848] {utils.py:315} DEBUG - 2024-04-29 13:23:18 [main] INFO org.cbioportal.annotator.internal.GenomeNexusImpl - On record 40000 out of 116708, annotation 34% complete | |
| [2024-04-29 13:23:19,848] {utils.py:315} DEBUG - 2024-04-29 13:23:18 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 3:g.1427472A>A;Error from VEP for: 3:g.1427472A>A | |
| [2024-04-29 13:23:19,848] {utils.py:315} DEBUG - 2024-04-29 13:23:18 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 3:g.1445212A>A;Error from VEP for: 3:g.1445212A>A | |
| [2024-04-29 13:23:19,848] {utils.py:315} DEBUG - 2024-04-29 13:23:18 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 3:g.1445212_1445213delinsAA;Error from VEP for: 3:g.1445212_1445213delinsAA | |
| [2024-04-29 13:23:19,848] {utils.py:315} DEBUG - 2024-04-29 13:23:18 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 3:g.4738955G>G;Error from VEP for: 3:g.4738955G>G | |
| [2024-04-29 13:23:19,848] {utils.py:315} DEBUG - 2024-04-29 13:23:18 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 3:g.9802250_9802253delinsAGAA;Error from VEP for: 3:g.9802250_9802253delinsAGAA | |
| [2024-04-29 13:23:19,848] {utils.py:315} DEBUG - 2024-04-29 13:23:18 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 3:g.10081677A>A;Error from VEP for: 3:g.10081677A>A | |
| [2024-04-29 13:23:19,848] {utils.py:315} DEBUG - 2024-04-29 13:23:18 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 3:g.10081718_10081720delinsTTT;Error from VEP for: 3:g.10081718_10081720delinsTTT | |
| [2024-04-29 13:23:19,848] {utils.py:315} DEBUG - 2024-04-29 13:23:18 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 3:g.10143061C>C;Error from VEP for: 3:g.10143061C>C | |
| [2024-04-29 13:23:19,848] {utils.py:315} DEBUG - 2024-04-29 13:23:18 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 3:g.10143062_10143064delinsTTT;Error from VEP for: 3:g.10143062_10143064delinsTTT | |
| [2024-04-29 13:23:19,848] {utils.py:315} DEBUG - 2024-04-29 13:23:19 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 3:g.10188283_10188286delinsTGAC;Error from VEP for: 3:g.10188283_10188286delinsTGAC | |
| [2024-04-29 13:23:20,581] {utils.py:315} DEBUG - 2024-04-29 13:23:19 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 3:g.10191487_10191488delinsGC;Error from VEP for: 3:g.10191487_10191488delinsGC | |
| [2024-04-29 13:23:20,582] {utils.py:315} DEBUG - 2024-04-29 13:23:19 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 3:g.10191564A>A;Error from VEP for: 3:g.10191564A>A | |
| [2024-04-29 13:23:20,582] {utils.py:315} DEBUG - 2024-04-29 13:23:19 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 3:g.10283873_10283874delinsAG;Error from VEP for: 3:g.10283873_10283874delinsAG | |
| [2024-04-29 13:23:20,582] {utils.py:315} DEBUG - 2024-04-29 13:23:19 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 3:g.12393037_12393040delinsTAGA;Error from VEP for: 3:g.12393037_12393040delinsTAGA | |
| [2024-04-29 13:23:20,582] {utils.py:315} DEBUG - 2024-04-29 13:23:19 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 3:g.12393048A>A;Error from VEP for: 3:g.12393048A>A | |
| [2024-04-29 13:23:20,582] {utils.py:315} DEBUG - 2024-04-29 13:23:19 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 3:g.12458270C>C;Error from VEP for: 3:g.12458270C>C | |
| [2024-04-29 13:23:20,582] {utils.py:315} DEBUG - 2024-04-29 13:23:19 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 3:g.12633289_12633291delinsCTC;Error from VEP for: 3:g.12633289_12633291delinsCTC | |
| [2024-04-29 13:23:20,582] {utils.py:315} DEBUG - 2024-04-29 13:23:19 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 3:g.13359129G>G;Error from VEP for: 3:g.13359129G>G | |
| [2024-04-29 13:23:20,582] {utils.py:315} DEBUG - 2024-04-29 13:23:19 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 3:g.14219966_14219968delinsCCT;Error from VEP for: 3:g.14219966_14219968delinsCCT | |
| [2024-04-29 13:23:20,582] {utils.py:315} DEBUG - 2024-04-29 13:23:19 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 3:g.25470119A>A;Error from VEP for: 3:g.25470119A>A | |
| [2024-04-29 13:23:20,582] {utils.py:315} DEBUG - 2024-04-29 13:23:19 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 3:g.25542672G>G;Error from VEP for: 3:g.25542672G>G | |
| [2024-04-29 13:23:20,582] {utils.py:315} DEBUG - 2024-04-29 13:23:19 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 3:g.25639792G>G;Error from VEP for: 3:g.25639792G>G | |
| [2024-04-29 13:23:20,582] {utils.py:315} DEBUG - 2024-04-29 13:23:19 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 3:g.25648715C>C;Error from VEP for: 3:g.25648715C>C | |
| [2024-04-29 13:23:20,582] {utils.py:315} DEBUG - 2024-04-29 13:23:19 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 3:g.25661374_25661380delinsAGTTTGA;Error from VEP for: 3:g.25661374_25661380delinsAGTTTGA | |
| [2024-04-29 13:23:20,582] {utils.py:315} DEBUG - 2024-04-29 13:23:19 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 3:g.25666225_25666230delinsACTTTT;Error from VEP for: 3:g.25666225_25666230delinsACTTTT | |
| [2024-04-29 13:23:20,582] {utils.py:315} DEBUG - 2024-04-29 13:23:19 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 3:g.25673949T>T;Error from VEP for: 3:g.25673949T>T | |
| [2024-04-29 13:23:20,582] {utils.py:315} DEBUG - 2024-04-29 13:23:19 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 3:g.25686929T>T;Error from VEP for: 3:g.25686929T>T | |
| [2024-04-29 13:23:20,582] {utils.py:315} DEBUG - 2024-04-29 13:23:19 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 3:g.27161265G>G;Error from VEP for: 3:g.27161265G>G | |
| [2024-04-29 13:23:20,582] {utils.py:315} DEBUG - 2024-04-29 13:23:19 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 3:g.27243993_27243994delinsCT;Error from VEP for: 3:g.27243993_27243994delinsCT | |
| [2024-04-29 13:23:20,582] {utils.py:315} DEBUG - 2024-04-29 13:23:19 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 3:g.27326342T>T;Error from VEP for: 3:g.27326342T>T | |
| [2024-04-29 13:23:20,582] {utils.py:315} DEBUG - 2024-04-29 13:23:19 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 3:g.30691807C>C;Error from VEP for: 3:g.30691807C>C | |
| [2024-04-29 13:23:20,582] {utils.py:315} DEBUG - 2024-04-29 13:23:19 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 3:g.30691872A>A;Error from VEP for: 3:g.30691872A>A | |
| [2024-04-29 13:23:20,582] {utils.py:315} DEBUG - 2024-04-29 13:23:19 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 3:g.30691872_30691873delinsAA;Error from VEP for: 3:g.30691872_30691873delinsAA | |
| [2024-04-29 13:23:20,583] {utils.py:315} DEBUG - 2024-04-29 13:23:19 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 3:g.30713153_30713165delinsTTGTTGCTAGTCA;Error from VEP for: 3:g.30713153_30713165delinsTTGTTGCTAGTCA | |
| [2024-04-29 13:23:20,583] {utils.py:315} DEBUG - 2024-04-29 13:23:19 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 3:g.30713211C>C;Error from VEP for: 3:g.30713211C>C | |
| [2024-04-29 13:23:20,583] {utils.py:315} DEBUG - 2024-04-29 13:23:19 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 3:g.30713896_30713899delinsTCTG;Error from VEP for: 3:g.30713896_30713899delinsTCTG | |
| [2024-04-29 13:23:20,583] {utils.py:315} DEBUG - 2024-04-29 13:23:19 [main] INFO org.cbioportal.annotator.internal.GenomeNexusImpl - On record 40500 out of 116708, annotation 34% complete | |
| [2024-04-29 13:23:20,583] {utils.py:315} DEBUG - 2024-04-29 13:23:19 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 3:g.32995888T>T;Error from VEP for: 3:g.32995888T>T | |
| [2024-04-29 13:23:20,583] {utils.py:315} DEBUG - 2024-04-29 13:23:19 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 3:g.36756662_36756663delinsTT;Error from VEP for: 3:g.36756662_36756663delinsTT | |
| [2024-04-29 13:23:20,583] {utils.py:315} DEBUG - 2024-04-29 13:23:19 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 3:g.36779824G>G;Error from VEP for: 3:g.36779824G>G | |
| [2024-04-29 13:23:20,583] {utils.py:315} DEBUG - 2024-04-29 13:23:19 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 3:g.37048490A>A;Error from VEP for: 3:g.37048490A>A | |
| [2024-04-29 13:23:20,583] {utils.py:315} DEBUG - 2024-04-29 13:23:19 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 3:g.37053348A>A;Error from VEP for: 3:g.37053348A>A | |
| [2024-04-29 13:23:20,583] {utils.py:315} DEBUG - 2024-04-29 13:23:19 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 3:g.37053576A>A;Error from VEP for: 3:g.37053576A>A | |
| [2024-04-29 13:23:20,583] {utils.py:315} DEBUG - 2024-04-29 13:23:19 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 3:g.37067184T>T;Error from VEP for: 3:g.37067184T>T | |
| [2024-04-29 13:23:20,583] {utils.py:315} DEBUG - 2024-04-29 13:23:19 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 3:g.37070378A>A;Error from VEP for: 3:g.37070378A>A | |
| [2024-04-29 13:23:20,583] {utils.py:315} DEBUG - 2024-04-29 13:23:20 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 3:g.37092005C>C;Error from VEP for: 3:g.37092005C>C | |
| [2024-04-29 13:23:22,005] {utils.py:315} DEBUG - 2024-04-29 13:23:20 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 3:g.37092174_37092176delinsTTC;Error from VEP for: 3:g.37092174_37092176delinsTTC | |
| [2024-04-29 13:23:22,005] {utils.py:315} DEBUG - 2024-04-29 13:23:20 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 3:g.37092302_37092305delinsGATT;Error from VEP for: 3:g.37092302_37092305delinsGATT | |
| [2024-04-29 13:23:22,005] {utils.py:315} DEBUG - 2024-04-29 13:23:20 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 3:g.38022357A>A;Error from VEP for: 3:g.38022357A>A | |
| [2024-04-29 13:23:22,005] {utils.py:315} DEBUG - 2024-04-29 13:23:20 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 3:g.38263085T>T;Error from VEP for: 3:g.38263085T>T | |
| [2024-04-29 13:23:22,005] {utils.py:315} DEBUG - 2024-04-29 13:23:20 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 3:g.38272052C>C;Error from VEP for: 3:g.38272052C>C | |
| [2024-04-29 13:23:22,005] {utils.py:315} DEBUG - 2024-04-29 13:23:20 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 3:g.38284237C>C;Error from VEP for: 3:g.38284237C>C | |
| [2024-04-29 13:23:22,005] {utils.py:315} DEBUG - 2024-04-29 13:23:20 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 3:g.38519754C>C;Error from VEP for: 3:g.38519754C>C | |
| [2024-04-29 13:23:22,005] {utils.py:315} DEBUG - 2024-04-29 13:23:20 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 3:g.38524866A>A;Error from VEP for: 3:g.38524866A>A | |
| [2024-04-29 13:23:22,005] {utils.py:315} DEBUG - 2024-04-29 13:23:20 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 3:g.41266134_41266136delinsCTT;Error from VEP for: 3:g.41266134_41266136delinsCTT | |
| [2024-04-29 13:23:22,005] {utils.py:315} DEBUG - 2024-04-29 13:23:20 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 3:g.41275877C>C;Error from VEP for: 3:g.41275877C>C | |
| [2024-04-29 13:23:22,005] {utils.py:315} DEBUG - 2024-04-29 13:23:20 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 3:g.41278277_41278280delinsACTT;Error from VEP for: 3:g.41278277_41278280delinsACTT | |
| [2024-04-29 13:23:22,005] {utils.py:315} DEBUG - 2024-04-29 13:23:20 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 3:g.41756973A>A;Error from VEP for: 3:g.41756973A>A | |
| [2024-04-29 13:23:22,005] {utils.py:315} DEBUG - 2024-04-29 13:23:20 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 3:g.41795861_41795871delinsGCAACTGAGCA;Error from VEP for: 3:g.41795861_41795871delinsGCAACTGAGCA | |
| [2024-04-29 13:23:22,005] {utils.py:315} DEBUG - 2024-04-29 13:23:20 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 3:g.41831016C>C;Error from VEP for: 3:g.41831016C>C | |
| [2024-04-29 13:23:22,005] {utils.py:315} DEBUG - 2024-04-29 13:23:20 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 3:g.41860985T>T;Error from VEP for: 3:g.41860985T>T | |
| [2024-04-29 13:23:22,005] {utils.py:315} DEBUG - 2024-04-29 13:23:20 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 3:g.41977368A>A;Error from VEP for: 3:g.41977368A>A | |
| [2024-04-29 13:23:22,005] {utils.py:315} DEBUG - 2024-04-29 13:23:20 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 3:g.43389564G>G;Error from VEP for: 3:g.43389564G>G | |
| [2024-04-29 13:23:22,005] {utils.py:315} DEBUG - 2024-04-29 13:23:20 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 3:g.43389943_43389947delinsTGCAG;Error from VEP for: 3:g.43389943_43389947delinsTGCAG | |
| [2024-04-29 13:23:22,005] {utils.py:315} DEBUG - 2024-04-29 13:23:20 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 3:g.46245605T>T;Error from VEP for: 3:g.46245605T>T | |
| [2024-04-29 13:23:22,005] {utils.py:315} DEBUG - 2024-04-29 13:23:20 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 3:g.46415286C>C;Error from VEP for: 3:g.46415286C>C | |
| [2024-04-29 13:23:22,005] {utils.py:315} DEBUG - 2024-04-29 13:23:20 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 3:g.46560368T>T;Error from VEP for: 3:g.46560368T>T | |
| [2024-04-29 13:23:22,005] {utils.py:315} DEBUG - 2024-04-29 13:23:20 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 3:g.48200388G>G;Error from VEP for: 3:g.48200388G>G | |
| [2024-04-29 13:23:22,005] {utils.py:315} DEBUG - 2024-04-29 13:23:20 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 3:g.48200432C>C;Error from VEP for: 3:g.48200432C>C | |
| [2024-04-29 13:23:22,005] {utils.py:315} DEBUG - 2024-04-29 13:23:20 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 3:g.48200922_48200923delinsTC;Error from VEP for: 3:g.48200922_48200923delinsTC | |
| [2024-04-29 13:23:22,005] {utils.py:315} DEBUG - 2024-04-29 13:23:20 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 3:g.49397560A>A;Error from VEP for: 3:g.49397560A>A | |
| [2024-04-29 13:23:22,005] {utils.py:315} DEBUG - 2024-04-29 13:23:20 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 3:g.49405885A>A;Error from VEP for: 3:g.49405885A>A | |
| [2024-04-29 13:23:22,005] {utils.py:315} DEBUG - 2024-04-29 13:23:20 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 3:g.49405944_49405946delinsTCT;Error from VEP for: 3:g.49405944_49405946delinsTCT | |
| [2024-04-29 13:23:22,006] {utils.py:315} DEBUG - 2024-04-29 13:23:20 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 3:g.49897114G>G;Error from VEP for: 3:g.49897114G>G | |
| [2024-04-29 13:23:22,006] {utils.py:315} DEBUG - 2024-04-29 13:23:20 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 3:g.49940076C>C;Error from VEP for: 3:g.49940076C>C | |
| [2024-04-29 13:23:22,006] {utils.py:315} DEBUG - 2024-04-29 13:23:20 [main] INFO org.cbioportal.annotator.internal.GenomeNexusImpl - On record 41000 out of 116708, annotation 35% complete | |
| [2024-04-29 13:23:22,006] {utils.py:315} DEBUG - 2024-04-29 13:23:22 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 3:g.50310793_50310795delinsCTT;Error from VEP for: 3:g.50310793_50310795delinsCTT | |
| [2024-04-29 13:23:22,749] {utils.py:315} DEBUG - 2024-04-29 13:23:22 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 3:g.50311902G>G;Error from VEP for: 3:g.50311902G>G | |
| [2024-04-29 13:23:22,749] {utils.py:315} DEBUG - 2024-04-29 13:23:22 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 3:g.50384978C>C;Error from VEP for: 3:g.50384978C>C | |
| [2024-04-29 13:23:22,750] {utils.py:315} DEBUG - 2024-04-29 13:23:22 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 3:g.50385580G>G;Error from VEP for: 3:g.50385580G>G | |
| [2024-04-29 13:23:22,750] {utils.py:315} DEBUG - 2024-04-29 13:23:22 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 3:g.50655080G>G;Error from VEP for: 3:g.50655080G>G | |
| [2024-04-29 13:23:22,750] {utils.py:315} DEBUG - 2024-04-29 13:23:22 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 3:g.50685471C>C;Error from VEP for: 3:g.50685471C>C | |
| [2024-04-29 13:23:22,750] {utils.py:315} DEBUG - 2024-04-29 13:23:22 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 3:g.50685575A>A;Error from VEP for: 3:g.50685575A>A | |
| [2024-04-29 13:23:22,750] {utils.py:315} DEBUG - 2024-04-29 13:23:22 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 3:g.51184025C>C;Error from VEP for: 3:g.51184025C>C | |
| [2024-04-29 13:23:22,750] {utils.py:315} DEBUG - 2024-04-29 13:23:22 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 3:g.51297747T>T;Error from VEP for: 3:g.51297747T>T | |
| [2024-04-29 13:23:22,750] {utils.py:315} DEBUG - 2024-04-29 13:23:22 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 3:g.51411945_51411947delinsTGT;Error from VEP for: 3:g.51411945_51411947delinsTGT | |
| [2024-04-29 13:23:23,460] {utils.py:315} DEBUG - 2024-04-29 13:23:22 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 3:g.51417604C>C;Error from VEP for: 3:g.51417604C>C | |
| [2024-04-29 13:23:23,460] {utils.py:315} DEBUG - 2024-04-29 13:23:22 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 3:g.51417604_51417605delinsCC;Error from VEP for: 3:g.51417604_51417605delinsCC | |
| [2024-04-29 13:23:23,460] {utils.py:315} DEBUG - 2024-04-29 13:23:22 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 3:g.52436788_52436794delinsCACCCAC;Error from VEP for: 3:g.52436788_52436794delinsCACCCAC | |
| [2024-04-29 13:23:23,460] {utils.py:315} DEBUG - 2024-04-29 13:23:22 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 3:g.52437305T>T;Error from VEP for: 3:g.52437305T>T | |
| [2024-04-29 13:23:23,460] {utils.py:315} DEBUG - 2024-04-29 13:23:22 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 3:g.52780152T>T;Error from VEP for: 3:g.52780152T>T | |
| [2024-04-29 13:23:23,460] {utils.py:315} DEBUG - 2024-04-29 13:23:22 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 3:g.57132383_57132384delinsAG;Error from VEP for: 3:g.57132383_57132384delinsAG | |
| [2024-04-29 13:23:23,460] {utils.py:315} DEBUG - 2024-04-29 13:23:22 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 3:g.58062864_58062866delinsGGA;Error from VEP for: 3:g.58062864_58062866delinsGGA | |
| [2024-04-29 13:23:23,460] {utils.py:315} DEBUG - 2024-04-29 13:23:22 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 3:g.58092521_58092522delinsTG;Error from VEP for: 3:g.58092521_58092522delinsTG | |
| [2024-04-29 13:23:23,460] {utils.py:315} DEBUG - 2024-04-29 13:23:22 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 3:g.58140654T>T;Error from VEP for: 3:g.58140654T>T | |
| [2024-04-29 13:23:23,460] {utils.py:315} DEBUG - 2024-04-29 13:23:22 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 3:g.58389621A>A;Error from VEP for: 3:g.58389621A>A | |
| [2024-04-29 13:23:23,460] {utils.py:315} DEBUG - 2024-04-29 13:23:22 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 3:g.58395318A>A;Error from VEP for: 3:g.58395318A>A | |
| [2024-04-29 13:23:23,460] {utils.py:315} DEBUG - 2024-04-29 13:23:22 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 3:g.58395326G>G;Error from VEP for: 3:g.58395326G>G | |
| [2024-04-29 13:23:23,460] {utils.py:315} DEBUG - 2024-04-29 13:23:22 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 3:g.70014343A>A;Error from VEP for: 3:g.70014343A>A | |
| [2024-04-29 13:23:23,460] {utils.py:315} DEBUG - 2024-04-29 13:23:22 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 3:g.71008187T>T;Error from VEP for: 3:g.71008187T>T | |
| [2024-04-29 13:23:23,461] {utils.py:315} DEBUG - 2024-04-29 13:23:23 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 3:g.71008342T>T;Error from VEP for: 3:g.71008342T>T | |
| [2024-04-29 13:23:23,897] {utils.py:315} DEBUG - 2024-04-29 13:23:23 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 3:g.71008342_71008343delinsTT;Error from VEP for: 3:g.71008342_71008343delinsTT | |
| [2024-04-29 13:23:23,898] {utils.py:315} DEBUG - 2024-04-29 13:23:23 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 3:g.71008342_71008344delinsTTT;Error from VEP for: 3:g.71008342_71008344delinsTTT | |
| [2024-04-29 13:23:23,898] {utils.py:315} DEBUG - 2024-04-29 13:23:23 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 3:g.71008342_71008345delinsTTTT;Error from VEP for: 3:g.71008342_71008345delinsTTTT | |
| [2024-04-29 13:23:23,898] {utils.py:315} DEBUG - 2024-04-29 13:23:23 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 3:g.71019982_71019983delinsAA;Error from VEP for: 3:g.71019982_71019983delinsAA | |
| [2024-04-29 13:23:23,898] {utils.py:315} DEBUG - 2024-04-29 13:23:23 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 3:g.71021797_71021798delinsTG;Error from VEP for: 3:g.71021797_71021798delinsTG | |
| [2024-04-29 13:23:23,898] {utils.py:315} DEBUG - 2024-04-29 13:23:23 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 3:g.71064782G>G;Error from VEP for: 3:g.71064782G>G | |
| [2024-04-29 13:23:23,898] {utils.py:315} DEBUG - 2024-04-29 13:23:23 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 3:g.77089857T>T;Error from VEP for: 3:g.77089857T>T | |
| [2024-04-29 13:23:23,898] {utils.py:315} DEBUG - 2024-04-29 13:23:23 [main] INFO org.cbioportal.annotator.internal.GenomeNexusImpl - On record 41500 out of 116708, annotation 35% complete | |
| [2024-04-29 13:23:23,898] {utils.py:315} DEBUG - 2024-04-29 13:23:23 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 3:g.77657038C>C;Error from VEP for: 3:g.77657038C>C | |
| [2024-04-29 13:23:23,898] {utils.py:315} DEBUG - 2024-04-29 13:23:23 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 3:g.77666937A>A;Error from VEP for: 3:g.77666937A>A | |
| [2024-04-29 13:23:23,898] {utils.py:315} DEBUG - 2024-04-29 13:23:23 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 3:g.77693932A>A;Error from VEP for: 3:g.77693932A>A | |
| [2024-04-29 13:23:23,898] {utils.py:315} DEBUG - 2024-04-29 13:23:23 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 3:g.77695346C>C;Error from VEP for: 3:g.77695346C>C | |
| [2024-04-29 13:23:23,898] {utils.py:315} DEBUG - 2024-04-29 13:23:23 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 3:g.78647940T>T;Error from VEP for: 3:g.78647940T>T | |
| [2024-04-29 13:23:23,898] {utils.py:315} DEBUG - 2024-04-29 13:23:23 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 3:g.78710099T>T;Error from VEP for: 3:g.78710099T>T | |
| [2024-04-29 13:23:23,898] {utils.py:315} DEBUG - 2024-04-29 13:23:23 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 3:g.78710235A>A;Error from VEP for: 3:g.78710235A>A | |
| [2024-04-29 13:23:23,898] {utils.py:315} DEBUG - 2024-04-29 13:23:23 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 3:g.79639036A>A;Error from VEP for: 3:g.79639036A>A | |
| [2024-04-29 13:23:23,898] {utils.py:315} DEBUG - 2024-04-29 13:23:23 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 3:g.89391024A>A;Error from VEP for: 3:g.89391024A>A | |
| [2024-04-29 13:23:24,355] {utils.py:315} DEBUG - 2024-04-29 13:23:23 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 3:g.89468363G>G;Error from VEP for: 3:g.89468363G>G | |
| [2024-04-29 13:23:24,355] {utils.py:315} DEBUG - 2024-04-29 13:23:24 [main] WARN org.cbioportal.annotator.internal.GenomeNexusImpl - Annotation failed for variant 3:g.119812287_119812288delinsCT;Error from VEP for: 3:g.119812287_119812288delinsCT |
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