jayeshkrishna
jayeshkrishna
/ build_uELM_AKSPx10x10.sh
Last active
July 30, 2024 20:19
E3SM ELM 1kmx1km run script for summit
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| #!/bin/bash | |
| set -e | |
| # Create a test case uELM_AKSP_I1850uELMCNPRDCTCBC | |
| E3SM_DIN="/gpfs/alpine2/cli180/proj-shared/wangd/inputdata" | |
| #E3SM_SRCROOT="/gpfs/alpine2/cli180/proj-shared/wangd/uELM" | |
| E3SM_SRCROOT="/gpfs/alpine2/cli180/proj-shared/jayesh/daliwang_uELM" |
jayeshkrishna
/ cime fix
Created
September 28, 2021 19:12
E3SM + gnu 11 fixes required for ANL GCE (v2.0.0-rc4-467-ge7a7dc2d36 + cime fix + sbetr fix = https://github.com/BeTR-biogeochemistry-modeling/sbetr/commit/51be6d5f858145654d3c94c2985b3e347dd5a1d4)
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| diff --git a/scripts/lib/CIME/XML/env_mach_specific.py b/scripts/lib/CIME/XML/env_mach_specific.py | |
| index 86b0ff869..3d477efc5 100644 | |
| --- a/scripts/lib/CIME/XML/env_mach_specific.py | |
| +++ b/scripts/lib/CIME/XML/env_mach_specific.py | |
| @@ -149,7 +149,7 @@ class EnvMachSpecific(EnvBase): | |
| # setup script if it exists. | |
| init_path = self.get_module_system_init_path("sh") | |
| if init_path: | |
| - source_cmd = "source {} && ".format(init_path) | |
| + source_cmd = ". {} && ".format(init_path) |
jayeshkrishna
/ build_scorpio.sh
Last active
September 21, 2021 16:30
Scorpio build script for anl gce nodes
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| #!/bin/bash | |
| module load autoconf/2.69-tz6eue5 | |
| module load automake/1.16.3-fm5m6qc | |
| module load libtool/2.4.6-jdxbjft | |
| module load m4/1.4.19-wq3bm42 | |
| module load cmake/3.20.5-yjp2hz6 | |
| module load gcc/11.1.0-5ikoznk | |
| module load zlib/1.2.11-smoyzzo | |
| #module load mpich/3.4.2-gnu |
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| diff --git a/components/elm/src/main/pftvarcon.F90 b/components/elm/src/main/pftvarcon.F90 | |
| index e2bffb5..eae421d 100644 | |
| --- a/components/elm/src/main/pftvarcon.F90 | |
| +++ b/components/elm/src/main/pftvarcon.F90 | |
| @@ -207,7 +207,7 @@ module pftvarcon | |
| real(r8), allocatable :: root_dmx(:) !maximum root depth | |
| integer, parameter :: pftname_len = 40 ! max length of pftname | |
| - character(len=pftname_len) :: pftname(0:mxpft) !PFT description | |
| + character(len=:), allocatable :: pftname(:) !PFT description |
jayeshkrishna
/ OpenMPI chrysalis master install info (omp_info)
Created
April 8, 2021 17:59
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| ====== omp_info ====== | |
| Package: Open MPI userx@xxxlogin1.xxxx.xxx.gov Distribution | |
| Open MPI: 5.1.0a1 | |
| Open MPI repo revision: v2.x-dev-8678-g18648d307b | |
| Open MPI release date: Unreleased developer copy | |
| MPI API: 3.1.0 | |
| Ident string: 5.1.0a1 | |
| Prefix: /xxx/soft/openmpi/master/chrys/intel-20.0.4 | |
| Configured architecture: x86_64-pc-linux-gnu | |
| Configured by: userx |
jayeshkrishna
/ argparser.cpp
Created
February 3, 2021 14:25
OpenMPI 4.0.4 + UCX 1.9.0 data corruption issue - test program and details
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| #include "mpi.h" | |
| #include <iostream> | |
| #include <string> | |
| #include <vector> | |
| #include <map> | |
| #include <regex> | |
| #include <cassert> | |
| #include <stdexcept> | |
| #include "argparser.h" |
jayeshkrishna
/ ecp_master_patch_summit_and_summitcpu_changes_101419_01.patch
Created
October 14, 2019 18:54
Getting ECP master to build on Summit
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| diff --git a/cime/config/e3sm/machines/config_compilers.xml b/cime/config/e3s | |
| m/machines/config_compilers.xml | |
| index 35ff773..257b85f 100644 | |
| --- a/cime/config/e3sm/machines/config_compilers.xml | |
| +++ b/cime/config/e3sm/machines/config_compilers.xml | |
| @@ -1793,6 +1793,34 @@ ntel/x86_64/2013/composer_xe_2013/composer_xe_201 | |
| 3_sp1.3.174/mkl/include </base> | |
| <SUPPORTS_CXX>TRUE</SUPPORTS_CXX> | |
| </compiler> | |
jayeshkrishna
/ ecp_master_patch_summit_cpu_101419_01.patch
Created
October 14, 2019 17:55
ECP master changes for summit-cpu
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| diff --git a/cime/config/e3sm/machines/config_compilers.xml b/cime/config/e3s | |
| m/machines/config_compilers.xml | |
| index 35ff773..257b85f 100644 | |
| --- a/cime/config/e3sm/machines/config_compilers.xml | |
| +++ b/cime/config/e3sm/machines/config_compilers.xml | |
| @@ -1793,6 +1793,34 @@ ntel/x86_64/2013/composer_xe_2013/composer_xe_201 | |
| 3_sp1.3.174/mkl/include </base> | |
| <SUPPORTS_CXX>TRUE</SUPPORTS_CXX> | |
| </compiler> | |
jayeshkrishna
/ master-merge-WH-JUL2019.patch
Created
July 15, 2019 21:43
Fixes required to build master-merge-WH-JUL2019 in ECP repo
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| diff --git a/cime/config/e3sm/machines/config_compilers.xml b/cime/config/e3s | |
| m/machines/config_compilers.xml | |
| index d29ee09..3e1e7c8 100644 | |
| --- a/cime/config/e3sm/machines/config_compilers.xml | |
| +++ b/cime/config/e3sm/machines/config_compilers.xml | |
| @@ -2049,6 +2049,8 @@ ntel/x86_64/2013/composer_xe_2013/composer_xe_2013 | |
| _sp1.3.174/mkl/include </base> | |
| <PIO_FILESYSTEM_HINTS>gpfs</PIO_FILESYSTEM_HINTS> | |
| <SCC> pgcc </SCC> | |
| <SFC> pgfortran </SFC> |
jayeshkrishna
/ anvil_cime_5_3_0_alpha29_patch
Created
July 31, 2017 17:09
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| diff --git a/cime/config/acme/machines/config_machines.xml b/cime/config/acme/machines/config_machines.xml | |
| index 1b5cc3d..4248ea2 100644 | |
| --- a/cime/config/acme/machines/config_machines.xml | |
| +++ b/cime/config/acme/machines/config_machines.xml | |
| @@ -1019,10 +1019,10 @@ | |
| <env name="KMP_HOT_TEAMS_MODE">1</env> | |
| <env name="KMP_HOT_TEAMS_MAX_LEVEL">1</env> | |
| </environment_variables> | |
| - <environment_variables SMP_PRESENT="FALSE"> | |
| - <env mpilib="mvapich" name="MV2_ENABLE_AFFINITY">1</env> |
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