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jazzwang/mahout 0.10 canopy test

Created December 20, 2015 07:53
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mahout 0.10 canopy test
root@mahout:~# wget http://archive.ics.uci.edu/ml/databases/synthetic_control/synthetic_control.data
root@mahout:~# hadoop fs -put synthetic_control.data testdata
root@mahout:~# hadoop fs -ls /user/root
Found 1 items
-rw-r--r-- 1 root supergroup 288374 2015-12-20 07:39 /user/root/testdata
root@mahout:~# hadoop fs -cat /user/root/testdata | head -n 2
28.7812 34.4632 31.3381 31.2834 28.9207 33.7596 25.3969 27.7849 35.2479 27.1159 32.8717 29.2171 36.0253 32.337 34.5249 32.8717 34.1173 26.5235 27.6623 26.3693 25.7744 29.27 30.7326 29.5054 33.0292 25.04 28.9167 24.3437 26.1203 34.9424 25.0293 26.6311 35.6541 28.4353 29.1495 28.1584 26.1927 33.3182 30.9772 27.0443 35.5344 26.2353 28.9964 32.0036 31.0558 34.2553 28.0721 28.9402 35.4973 29.747 31.4333 24.5556 33.7431 25.0466 34.9318 34.9879 32.4721 33.3759 25.4652 25.8717
24.8923 25.741 27.5532 32.8217 27.8789 31.5926 31.4861 35.5469 27.9516 31.6595 27.5415 31.1887 27.4867 31.391 27.811 24.488 27.5918 35.6273 35.4102 31.4167 30.7447 24.1311 35.1422 30.4719 31.9874 33.6615 25.5511 30.4686 33.6472 25.0701 34.0765 32.5981 28.3038 26.1471 26.9414 31.5203 33.1089 24.1491 28.5157 25.7906 35.9519 26.5301 24.8578 25.9562 32.8357 28.5322 26.3458 30.6213 28.9861 29.4047 32.5577 31.0205 26.6418 28.4331 33.6564 26.4244 28.4661 34.2484 32.1005 26.691
cat: Unable to write to output stream
root@mahout:~# mahout org.apache.mahout.clustering.syntheticcontrol.canopy.Job
MAHOUT_LOCAL is not set; adding HADOOP_CONF_DIR to classpath.
Running on hadoop, using /usr/lib/hadoop/bin/hadoop and HADOOP_CONF_DIR=/etc/hadoop/conf
MAHOUT-JOB: /usr/lib/mahout/mahout-examples-0.10.0-job.jar
15/12/20 07:50:06 WARN MahoutDriver: No org.apache.mahout.clustering.syntheticcontrol.canopy.Job.props found on classpath, will use command-line arguments only
15/12/20 07:50:06 INFO Job: Running with default arguments
15/12/20 07:50:07 INFO RMProxy: Connecting to ResourceManager at /0.0.0.0:8032
15/12/20 07:50:07 WARN JobSubmitter: Hadoop command-line option parsing not performed. Implement the Tool interface and execute your application with ToolRunner to remedy this.
15/12/20 07:50:08 INFO FileInputFormat: Total input paths to process : 1
15/12/20 07:50:08 INFO JobSubmitter: number of splits:1
15/12/20 07:50:08 INFO JobSubmitter: Submitting tokens for job: job_1450596139560_0005
15/12/20 07:50:09 INFO YarnClientImpl: Submitted application application_1450596139560_0005
15/12/20 07:50:09 INFO Job: The url to track the job: http://mahout:8088/proxy/application_1450596139560_0005/
15/12/20 07:50:09 INFO Job: Running job: job_1450596139560_0005
15/12/20 07:50:15 INFO Job: Job job_1450596139560_0005 running in uber mode : false
15/12/20 07:50:15 INFO Job: map 0% reduce 0%
15/12/20 07:50:20 INFO Job: map 100% reduce 0%
15/12/20 07:50:20 INFO Job: Job job_1450596139560_0005 completed successfully
15/12/20 07:50:20 INFO Job: Counters: 30
File System Counters
FILE: Number of bytes read=0
FILE: Number of bytes written=106816
FILE: Number of read operations=0
FILE: Number of large read operations=0
FILE: Number of write operations=0
HDFS: Number of bytes read=288479
HDFS: Number of bytes written=335470
HDFS: Number of read operations=5
HDFS: Number of large read operations=0
HDFS: Number of write operations=2
Job Counters
Launched map tasks=1
Data-local map tasks=1
Total time spent by all maps in occupied slots (ms)=3022
Total time spent by all reduces in occupied slots (ms)=0
Total time spent by all map tasks (ms)=3022
Total vcore-seconds taken by all map tasks=3022
Total megabyte-seconds taken by all map tasks=3094528
Map-Reduce Framework
Map input records=600
Map output records=600
Input split bytes=105
Spilled Records=0
Failed Shuffles=0
Merged Map outputs=0
GC time elapsed (ms)=32
CPU time spent (ms)=1200
Physical memory (bytes) snapshot=171528192
Virtual memory (bytes) snapshot=842551296
Total committed heap usage (bytes)=201326592
File Input Format Counters
Bytes Read=288374
File Output Format Counters
Bytes Written=335470
15/12/20 07:50:20 INFO CanopyDriver: Build Clusters Input: output/data Out: output Measure: org.apache.mahout.common.distance.EuclideanDistanceMeasure@743bb0 t1: 80.0 t2: 55.0
15/12/20 07:50:20 INFO RMProxy: Connecting to ResourceManager at /0.0.0.0:8032
15/12/20 07:50:20 WARN JobSubmitter: Hadoop command-line option parsing not performed. Implement the Tool interface and execute your application with ToolRunner to remedy this.
15/12/20 07:50:20 INFO FileInputFormat: Total input paths to process : 1
15/12/20 07:50:20 INFO JobSubmitter: number of splits:1
15/12/20 07:50:20 INFO JobSubmitter: Submitting tokens for job: job_1450596139560_0006
15/12/20 07:50:21 INFO YarnClientImpl: Submitted application application_1450596139560_0006
15/12/20 07:50:21 INFO Job: The url to track the job: http://mahout:8088/proxy/application_1450596139560_0006/
15/12/20 07:50:21 INFO Job: Running job: job_1450596139560_0006
15/12/20 07:50:31 INFO Job: Job job_1450596139560_0006 running in uber mode : false
15/12/20 07:50:31 INFO Job: map 0% reduce 0%
15/12/20 07:50:36 INFO Job: map 100% reduce 0%
15/12/20 07:50:43 INFO Job: map 100% reduce 100%
15/12/20 07:50:43 INFO Job: Job job_1450596139560_0006 completed successfully
15/12/20 07:50:43 INFO Job: Counters: 49
File System Counters
FILE: Number of bytes read=13906
FILE: Number of bytes written=244809
FILE: Number of read operations=0
FILE: Number of large read operations=0
FILE: Number of write operations=0
HDFS: Number of bytes read=335591
HDFS: Number of bytes written=7562
HDFS: Number of read operations=7
HDFS: Number of large read operations=0
HDFS: Number of write operations=2
Job Counters
Launched map tasks=1
Launched reduce tasks=1
Data-local map tasks=1
Total time spent by all maps in occupied slots (ms)=3198
Total time spent by all reduces in occupied slots (ms)=3752
Total time spent by all map tasks (ms)=3198
Total time spent by all reduce tasks (ms)=3752
Total vcore-seconds taken by all map tasks=3198
Total vcore-seconds taken by all reduce tasks=3752
Total megabyte-seconds taken by all map tasks=3274752
Total megabyte-seconds taken by all reduce tasks=3842048
Map-Reduce Framework
Map input records=600
Map output records=25
Map output bytes=13800
Map output materialized bytes=13906
Input split bytes=121
Combine input records=0
Combine output records=0
Reduce input groups=1
Reduce shuffle bytes=13906
Reduce input records=25
Reduce output records=6
Spilled Records=50
Shuffled Maps =1
Failed Shuffles=0
Merged Map outputs=1
GC time elapsed (ms)=56
CPU time spent (ms)=2090
Physical memory (bytes) snapshot=462516224
Virtual memory (bytes) snapshot=1686986752
Total committed heap usage (bytes)=402653184
Shuffle Errors
BAD_ID=0
CONNECTION=0
IO_ERROR=0
WRONG_LENGTH=0
WRONG_MAP=0
WRONG_REDUCE=0
File Input Format Counters
Bytes Read=335470
File Output Format Counters
Bytes Written=7562
15/12/20 07:50:43 INFO RMProxy: Connecting to ResourceManager at /0.0.0.0:8032
15/12/20 07:50:43 WARN JobSubmitter: Hadoop command-line option parsing not performed. Implement the Tool interface and execute your application with ToolRunner to remedy this.
15/12/20 07:50:43 INFO FileInputFormat: Total input paths to process : 1
15/12/20 07:50:43 INFO JobSubmitter: number of splits:1
15/12/20 07:50:43 INFO JobSubmitter: Submitting tokens for job: job_1450596139560_0007
15/12/20 07:50:44 INFO YarnClientImpl: Submitted application application_1450596139560_0007
15/12/20 07:50:44 INFO Job: The url to track the job: http://mahout:8088/proxy/application_1450596139560_0007/
15/12/20 07:50:44 INFO Job: Running job: job_1450596139560_0007
15/12/20 07:50:54 INFO Job: Job job_1450596139560_0007 running in uber mode : false
15/12/20 07:50:54 INFO Job: map 0% reduce 0%
15/12/20 07:51:00 INFO Job: map 100% reduce 0%
15/12/20 07:51:00 INFO Job: Job job_1450596139560_0007 completed successfully
15/12/20 07:51:00 INFO Job: Counters: 30
File System Counters
FILE: Number of bytes read=0
FILE: Number of bytes written=108252
FILE: Number of read operations=0
FILE: Number of large read operations=0
FILE: Number of write operations=0
HDFS: Number of bytes read=343355
HDFS: Number of bytes written=363222
HDFS: Number of read operations=13
HDFS: Number of large read operations=0
HDFS: Number of write operations=2
Job Counters
Launched map tasks=1
Data-local map tasks=1
Total time spent by all maps in occupied slots (ms)=3390
Total time spent by all reduces in occupied slots (ms)=0
Total time spent by all map tasks (ms)=3390
Total vcore-seconds taken by all map tasks=3390
Total megabyte-seconds taken by all map tasks=3471360
Map-Reduce Framework
Map input records=600
Map output records=600
Input split bytes=121
Spilled Records=0
Failed Shuffles=0
Merged Map outputs=0
GC time elapsed (ms)=29
CPU time spent (ms)=1410
Physical memory (bytes) snapshot=171155456
Virtual memory (bytes) snapshot=829710336
Total committed heap usage (bytes)=201326592
File Input Format Counters
Bytes Read=335470
File Output Format Counters
Bytes Written=363222
{"r":[0.183,1.462,2.78,3.546,3.481,3.226,1.672,1.132,1.186,2.301,3.296,2.987,2.537,1.837,1.617,2.417,3.044,4.008,3.886,3.688,3.049,2.733,1.988,2.034,2.252,2.901,2.537,2.77,3.181,4.115,4.965,6.178,6.628,6.887,6.646,5.97,5.866,4.883,4.657,4.643,4.652,5.582,5.969,6.598,7.555,8.148,8.941,8.269,7.764,7.117,6.315,6.004,5.574,5.688,5.978,6.526,6.682,7.223,7.878,8.267],"c":[30.071,31.088,31.885,31.942,31.848,31.503,30.35,29.729,28.543,28.62,27.378,27.514,27.882,28.733,28.99,29.92,30.321,30.484,30.647,30.473,30.092,27.739,26.843,26.265,25.678,24.522,25.253,25.728,25.37,25.716,25.837,26.172,25.384,25.008,23.279,22.892,21.29,20.565,19.599,19.733,19.614,19.605,20.332,20.409,21.045,21.46,20.981,21.349,21.164,20.679,20.158,19.749,18.93,18.254,18.313,18.818,19.311,19.673,19.604,20.898],"n":9,"identifier":"C-0"}
Weight : [props - optional]: Point:
1.0 : [distance=91.56195743001058]: [34.758,27.233,29.696,25.885,26.54,31.134,25.037,20.582,27.216,21.948,20.745,28.963,19.58,21.069,25.237,18.536,20.531,21.009,21.623,19.681,17.87,20.057,15.625,19.459,19.662,20.113,13.512,17.312,14.962,13.642,20.624,18.942,11.751,15.77,12.761,15.35,11.058,11.049,7.154,12.108,10.914,15.312,4.75,11.451,7.409,1.798,2.758,12.27,2.261,0.281,5.607,2.778,8.248,-1.948,4.64,-1.098,1.734,-0.389,-0.918,-5.115]
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1.0 : [distance=27.416127109479312]: [30.343,33.085,28.13,31.294,28.719,30.306,26.441,29.986,25.757,26.601,27.699,27.233,29.376,31.373,30.535,24.821,23.137,24.924,30.362,29.024,28.737,19.135,19.318,22.184,24.326,21.256,24.222,24.839,24.351,18.481,21.962,20.152,18.972,22.825,22.988,23.799,18.61,17.205,17.968,22.92,21.987,22.731,18.08,19.168,20.863,19.833,16.372,19.79,16.253,15.409,16.462,19.237,14.938,12.695,16.116,19.813,17.155,19.612,19.827,13.522]
1.0 : [distance=39.50876203162965]: [35.808,31.081,24.708,33.25,27.58,32.197,33.551,25.853,30.312,29.219,30.36,25.589,31.237,30.415,26.281,29.581,25.528,24.473,30.356,19.168,25.713,25.939,29.067,22.784,24.974,18.374,19.958,16.594,25.982,25.78,21.492,16.749,24.357,19.331,23.435,25.199,22.319,22.317,16.496,14.443,21.78,24.062,17.402,22.303,12.297,17.604,11.538,12.63,11.392,12.564,18.107,18.251,16.264,13.074,19.478,17.523,8.629,16.786,7.773,12.647]
1.0 : [distance=68.57437450493295]: [29.867,27.662,30.615,27.443,26.834,29.238,28.5,25.822,32.061,23.053,23.046,28.729,19.495,24.597,29.458,28.13,26.827,18.405,23.911,23.385,25.663,18.145,17.487,23.53,24.485,17.958,23.168,21.471,15.201,15.921,23.03,15.682,17.863,19.779,12.747,16.593,14.861,11.23,13.949,17.009,17.119,7.537,11.233,8.134,5.484,16.281,5.18,8.507,13.885,9.961,5.813,6.94,13.238,5.075,1.437,3.341,7.066,11.391,4.029,0.398]
1.0 : [distance=84.23756255147966]: [33.982,27.292,23.285,31.68,27.752,28.281,22.657,32.096,23.95,29.764,26.166,24.675,25.807,20.08,20.555,19.438,26.317,17.243,26.964,22.209,22.891,14.457,19.237,16.465,19.157,12.311,15.326,15.531,20.297,10.217,14.253,12.514,10.259,16.094,10.67,10.358,13.517,7.013,12.146,7.555,13.103,8.122,14.478,13.573,8.088,5.955,4.553,5.662,6.304,7.855,6.207,9.389,6.852,-0.305,9.996,-2.05,8.857,5.353,6.883,-2.805]
1.0 : [distance=76.42611302413457]: [29.342,32.128,24.462,23.814,31.151,23.235,24.278,32.621,24.863,23.868,31.156,23.508,20.793,20.928,24.837,25.32,22.193,18.089,20.21,17.955,21.685,17.908,26.203,15.083,19.347,23.237,18.984,19.694,13.175,13.186,15.594,15.294,14.955,11.323,15.228,17.206,18.213,8.849,14.628,9.848,7.364,16.869,9.205,11.058,6.937,10.479,5.848,5.093,7.285,2.71,7.165,9.442,6.34,11.035,5.163,5.057,3.81,10.084,4.274,7.158]
1.0 : [distance=67.54495905978763]: [32.988,30.099,32.923,30.828,30.08,31.882,22.925,29.649,20.623,20.459,26.64,29.324,25.901,24.628,22.665,25.443,18.324,26.998,20.707,26.018,24.886,16.114,21.037,18.21,17.903,14.912,20.871,22.885,23.599,21.208,19.926,19.274,18.713,18.53,19.519,9.353,9.621,17.05,15.577,16.249,8.516,18.211,16.02,9.539,12.363,7.204,10.687,8.992,12.036,11.27,8.509,10.665,4.967,3.102,9.931,10.972,2.643,0.184,5.209,1.268]
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1.0 : [distance=51.74482770346846]: [26.369,37.791,41.839,39.694,36.728,35.079,30.668,24.755,20.61,18.885,15.459,14.074,19.117,34.23,32.202,40.715,39.543,37.193,39.448,30.829,25.273,22.324,19.801,13.505,17.462,24.287,27.398,38.577,42.108,41.947,43.987,41.331,28.958,23.664,20.308,22.244,12.149,15.768,18.964,32.579,33.202,36.205,42.364,40.601,35.415,39.576,33.145,19.936,23.062,19.053,24.383,19.611,25.218,38.86,36.57,38.964,36.946,36.9,32.593,31.563]
1.0 : [distance=74.77880379878118]: [35.389,31.178,40.041,43.034,49.524,40.942,42.369,30.153,26.253,23.178,19.885,19.693,21.837,26.858,23.533,29.798,43.401,43.349,48.238,43.868,44.017,28.056,25.284,22.737,13.703,14.023,22.115,23.72,25.478,37.87,37.868,46.954,43.135,41.286,37.269,29.347,24.312,21.743,19.152,21.668,10.882,16.147,30.02,28.472,38.716,44.62,47.847,48.846,39.361,38.449,33.105,19.935,14.961,12.149,12.63,13.459,18.967,35.473,30.146,45.527]
1.0 : [distance=76.30544621109495]: [27.662,37.199,39.158,44.264,46.473,40.178,38.728,24.412,25.155,15.938,13.125,16.867,13.875,29.969,34.322,40.87,44.225,47.594,47.607,44.751,39.813,32.461,16.646,16.305,21.256,20.627,19.267,31.901,34.995,43.643,43.152,47.125,48.524,33.131,32.697,20.3,14.35,18.33,12.155,11.261,19.701,29.313,30.457,39.914,49.543,49.851,46.445,39.561,28.86,22.486,13.967,10.006,11.715,15.945,21.348,25.439,41.024,37.105,45.623,43.589]
1.0 : [distance=45.415811212235155]: [25.784,34.129,42.659,37.176,35.961,34.307,32.108,29.749,25.047,17.455,24.652,25.311,22.995,30.256,25.955,28.426,34.556,40.386,39.642,40.566,32.612,34.091,26.033,25.668,26.545,17.338,24.98,20.134,27.542,36.612,31.855,37.947,39.736,33.535,36.607,37.479,32.612,22.262,20.662,16.124,24.547,27.686,21.747,27.198,31.259,40.569,37.067,34.465,34.73,33.371,23.06,30.162,22.022,22.216,14.812,19.357,24.508,34.432,32.155,34.839]
1.0 : [distance=73.14237594803824]: [25.87,39.195,36.908,47.052,47.384,40.741,42.494,30.282,25.834,17.65,16.004,17.895,13.321,19.045,27.44,31.911,39.208,43.622,41.567,44.815,44.921,35.422,35.477,23.19,17.859,14.684,23.504,23.141,21.746,30.816,31.361,37.015,38.094,46.688,47.681,43.777,39.652,31.701,23.767,22.265,22.654,22.327,19.195,21.163,29.602,27.563,36.244,38.859,44.234,42.352,42.16,40.172,30.094,21.092,25.193,13.096,18.111,14.754,27.386,27.026]
1.0 : [distance=64.14475717744268]: [28.075,41.784,42.12,38.735,44.32,34.316,32.212,31.868,24.301,14.547,17.178,22.279,24.357,31.011,31.444,34.837,46.55,48.301,38.859,42.363,35.657,31.499,19.794,12.124,15.371,12.436,15.763,24.679,32.597,43.004,36.616,38.935,42.954,34.957,36.183,28.177,16.326,14.988,10.68,22.728,24.075,24.058,36.616,43.982,39.198,40.118,40.078,34.752,34.018,23.75,18.374,12.251,15.539,18.699,28.973,24.044,39.404,38.034,46.458,44.432]
1.0 : [distance=47.73514004495213]: [33.67,38.675,39.742,41.989,37.291,43.975,31.909,25.878,31.08,15.858,13.95,23.097,19.983,21.692,31.579,38.57,33.376,38.843,41.936,33.534,39.195,32.897,25.343,18.523,15.089,17.771,22.614,25.313,23.687,29.01,41.995,35.712,40.872,41.669,32.156,25.162,24.98,23.705,18.413,20.975,14.906,26.171,30.165,27.818,35.083,39.514,37.851,33.967,32.338,34.977,26.589,28.079,19.597,24.669,23.098,25.685,28.215,34.94,36.91,39.749]
15/12/20 07:51:00 INFO ClusterDumper: Wrote 6 clusters
15/12/20 07:51:00 INFO MahoutDriver: Program took 54308 ms (Minutes: 0.9051333333333333)
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