Created
March 7, 2012 16:15
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My .Rprofile that works both on Windows and Linux
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# .Rprofile -- commands in this file will be executed at the beginning of | |
# each R session. On Windows, the R_PROFILE environment variable must have value | |
# with the full path to this file. On Linux (or other Unix like systems) this file | |
# must be in the user's home directory. | |
# Set the default repository to the main CRAN site | |
options(repos=c(CRAN='http://cran.r-project.org')) | |
# Set the oDrive varaible and library path | |
if(Sys.info()['sysname'] == 'Windows') { | |
oDrive = 'o:/' | |
.libPaths(paste(oDrive, 'R/library/Windows', sep='')) | |
require(utils, quietly=TRUE) | |
print("Setting memory limit for R to 4GB...") | |
memory.limit(size=4095) #Set to 4GB (for 64-bit Windows, this can be much larger) | |
message(paste('R_LIBS: ', Sys.getenv('R_LIBS'), sep='')) | |
message(paste('R_PROFILE: ', Sys.getenv('R_PROFILE'), sep='')) | |
} else if(Sys.info()['sysname'] == 'Linux') { | |
oDrive = '/n01/OutcomesAssessment/' | |
.libPaths(paste(oDrive, 'R/library/Linux', sep='')) | |
} else if(Sys.info()['sysname'] == 'Darwin') { | |
oDrive = NULL | |
} | |
# Customize the default look and feel of ggplot2 | |
if(require(ggplot2, quietly=TRUE)) { | |
theme_update(panel.background=theme_blank(), | |
panel.grid.major=theme_blank(), | |
panel.border=theme_blank()) | |
} | |
# On Linux we will alter the default behavior of the makeR package. | |
if(Sys.info()['sysname'] == 'Linux') { | |
if(require(makeR, quietly=TRUE)) { | |
setAutoOpen(FALSE) | |
setDefaultBuilder(builder.rnw.native) | |
} | |
} | |
# Change the location of the SQL repository | |
if(require(irutils, quietly=TRUE)) { | |
setSQLRepos(paste(oDrive, 'R/ecir/data', sep='')) | |
} |
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