Jean-Christophe Fillion-Robin jcfr

## vtkITKTransformInverse.h
// PR#1096
// https://github.com/Slicer/Slicer/pull/1096/commits/5d8cce93acfcd9504e98cb318e1ddff92afea723#diff-685fe5dc92e213efacb56c685635f8a7
/*=========================================================================

  Program:   Visualization Toolkit
  Module:    $RCSfile: vtkITKTransformInverse.h,v $

  Copyright (c) Ken Martin, Will Schroeder, Bill Lorensen
  All rights reserved.
  See Copyright.txt or http://www.kitware.com/Copyright.htm for details.

## maker_layer_structures.py
from allensdk.api.queries.rma_api import RmaApi
import allensdk.core.json_utilities as ju


all_structs = []

root = RmaApi().model_query("Structure", criteria="[graph_id$eq1],[acronym$eqgrey]")[0]

all_structs.append(root)

## dmctk-CMakeCache.txt
# This is the CMakeCache file.
# For build in directory: /work/Slicer-build/DCMTK-build
# It was generated by CMake: /usr/bin/cmake
# You can edit this file to change values found and used by cmake.
# If you do not want to change any of the values, simply exit the editor.
# If you do want to change a value, simply edit, save, and exit the editor.
# The syntax for the file is as follows:
# KEY:TYPE=VALUE
# KEY is the name of a variable in the cache.
# TYPE is a hint to GUIs for the type of VALUE, DO NOT EDIT TYPE!.

## CMakeLists.txt

cmake_minimum_required(VERSION 3.12)

project(Test LANGUAGES CXX)

# launcher executable
set(CTKAppLauncher_EXECUTABLE ${CMAKE_CURRENT_BINARY_DIR}/fake_launcher_executable)
file(WRITE ${CTKAppLauncher_EXECUTABLE} "")

# application and executable name

## CMakeLists.txt
cmake_minimum_required(VERSION 3.12)

set(CMAKE_CXX_STANDARD 11)

project(Test)

option(${PROJECT_NAME}_SUPERBUILD "Build ${PROJECT_NAME} and the projects it depends on." ON)

if(${PROJECT_NAME}_SUPERBUILD)
    include("${CMAKE_CURRENT_SOURCE_DIR}/SuperBuild.cmake")

## Dockerfile
#FROM quay.io/pypa/manylinux1_x86_64
FROM dockcross/manylinux-x64
# FROM quay.io/pypa/manylinux1_i686
# Includes glibc 2.5

RUN mkdir /build
WORKDIR /build

RUN yum install -y \
    # for easier development

## verify_cmake_check_for_bad_ssl_cert.cmake
#
# slicer_check_cmake_https
#
# Check if CMake supports downloading files using the HTTPS protocol. Fail if
# HTTPS is unsupported.
#
# CMake should support HTTPS when compiled with CMAKE_USE_OPENSSL enabled.
#
# Based on the script created by Jean-Christophe Fillion-Robin:
# https://gist.github.com/jcfr/e88a2a7cbc4ddd235186

## cronjob_docker_cleanup.sh
#!/bin/bash

#
# This script maintained at https://gist.github.com/jcfr/0bb9b695a5f1511a4b66f9e872d44743
#

#
# Source: https://lebkowski.name/docker-volumes/#recap
#

## slicer_git_history_350_largest_files.txt
        size    pack_size sha                                      location
       55MiB        55MiB 2cadcca7dd65c008c03ca0786ed3b02ad86cc900 Modules/Meshing/Testing/Data/CA05042124RFinal.img.gz
       22MiB       4.9MiB 56760af8680e9ff7e857a97b384fb9c0b974ea11 Modules/Meshing/Testing/Data/lumbar_smoothed_04075.stl
       15MiB       4.6MiB 0b64a9fbd9a0b02f65c726da71b7128013b94e3a Modules/CLI/RigidRegistration/Data/Baseline/RigidRegistrationTest02.nrrd
       13MiB        13MiB d8ffda6d56ebd27758e54d3550dd64ff362a9589 Applications/CLI/BRAINSTools/BRAINSCommonLib/TestData/OutDefField_orientedImage.nii.gz
       13MiB       7.0MiB f56677b93dfcf31975dd86e2b4cff954795467e5 Modules/CLI/ModelToLabelMap/Data/Input/OAS10001.img
       12MiB        11MiB 82101881013d74236903d672b5e85b138cd96acd Modules/TumorGrowth/Testing/Script-Results/TG_Deformable_Deformation_Inverse.mha
       12MiB        11MiB 3d8a4983f4df3b7c5f77f6d945ce415d0495c1c7 Modules/TumorGrowth/Testing/GUI-Results/TG_Deformable_Deformation_Inverse.mha

## git_list_largest_file_from_history.sh
#!/bin/bash

set -eo pipefail

#
# This script will list the N largest files found in the history of a Git project.
#
# References:
# * https://docs.acquia.com/article/removing-large-files-git-without-losing-history
# * https://stackoverflow.com/questions/10622179/how-to-find-identify-large-files-commits-in-git-history
	// PR#1096
	// https://github.com/Slicer/Slicer/pull/1096/commits/5d8cce93acfcd9504e98cb318e1ddff92afea723#diff-685fe5dc92e213efacb56c685635f8a7
	/*=========================================================================

	Program: Visualization Toolkit
	Module: $RCSfile: vtkITKTransformInverse.h,v $

	Copyright (c) Ken Martin, Will Schroeder, Bill Lorensen
	All rights reserved.
	See Copyright.txt or http://www.kitware.com/Copyright.htm for details.
	from allensdk.api.queries.rma_api import RmaApi
	import allensdk.core.json_utilities as ju


	all_structs = []

	root = RmaApi().model_query("Structure", criteria="[graph_id$eq1],[acronym$eqgrey]")[0]

	all_structs.append(root)
	# This is the CMakeCache file.
	# For build in directory: /work/Slicer-build/DCMTK-build
	# It was generated by CMake: /usr/bin/cmake
	# You can edit this file to change values found and used by cmake.
	# If you do not want to change any of the values, simply exit the editor.
	# If you do want to change a value, simply edit, save, and exit the editor.
	# The syntax for the file is as follows:
	# KEY:TYPE=VALUE
	# KEY is the name of a variable in the cache.
	# TYPE is a hint to GUIs for the type of VALUE, DO NOT EDIT TYPE!.

	cmake_minimum_required(VERSION 3.12)

	project(Test LANGUAGES CXX)

	# launcher executable
	set(CTKAppLauncher_EXECUTABLE ${CMAKE_CURRENT_BINARY_DIR}/fake_launcher_executable)
	file(WRITE ${CTKAppLauncher_EXECUTABLE} "")

	# application and executable name
	cmake_minimum_required(VERSION 3.12)

	set(CMAKE_CXX_STANDARD 11)

	project(Test)

	option(${PROJECT_NAME}_SUPERBUILD "Build ${PROJECT_NAME} and the projects it depends on." ON)

	if(${PROJECT_NAME}_SUPERBUILD)
	include("${CMAKE_CURRENT_SOURCE_DIR}/SuperBuild.cmake")
	#FROM quay.io/pypa/manylinux1_x86_64
	FROM dockcross/manylinux-x64
	# FROM quay.io/pypa/manylinux1_i686
	# Includes glibc 2.5

	RUN mkdir /build
	WORKDIR /build

	RUN yum install -y \
	# for easier development
	#
	# slicer_check_cmake_https
	#
	# Check if CMake supports downloading files using the HTTPS protocol. Fail if
	# HTTPS is unsupported.
	#
	# CMake should support HTTPS when compiled with CMAKE_USE_OPENSSL enabled.
	#
	# Based on the script created by Jean-Christophe Fillion-Robin:
	# https://gist.github.com/jcfr/e88a2a7cbc4ddd235186
	#!/bin/bash

	#
	# This script maintained at https://gist.github.com/jcfr/0bb9b695a5f1511a4b66f9e872d44743
	#

	#
	# Source: https://lebkowski.name/docker-volumes/#recap
	#
	size pack_size sha location
	55MiB 55MiB 2cadcca7dd65c008c03ca0786ed3b02ad86cc900 Modules/Meshing/Testing/Data/CA05042124RFinal.img.gz
	22MiB 4.9MiB 56760af8680e9ff7e857a97b384fb9c0b974ea11 Modules/Meshing/Testing/Data/lumbar_smoothed_04075.stl
	15MiB 4.6MiB 0b64a9fbd9a0b02f65c726da71b7128013b94e3a Modules/CLI/RigidRegistration/Data/Baseline/RigidRegistrationTest02.nrrd
	13MiB 13MiB d8ffda6d56ebd27758e54d3550dd64ff362a9589 Applications/CLI/BRAINSTools/BRAINSCommonLib/TestData/OutDefField_orientedImage.nii.gz
	13MiB 7.0MiB f56677b93dfcf31975dd86e2b4cff954795467e5 Modules/CLI/ModelToLabelMap/Data/Input/OAS10001.img
	12MiB 11MiB 82101881013d74236903d672b5e85b138cd96acd Modules/TumorGrowth/Testing/Script-Results/TG_Deformable_Deformation_Inverse.mha
	12MiB 11MiB 3d8a4983f4df3b7c5f77f6d945ce415d0495c1c7 Modules/TumorGrowth/Testing/GUI-Results/TG_Deformable_Deformation_Inverse.mha
	#!/bin/bash

	set -eo pipefail

	#
	# This script will list the N largest files found in the history of a Git project.
	#
	# References:
	# * https://docs.acquia.com/article/removing-large-files-git-without-losing-history
	# * https://stackoverflow.com/questions/10622179/how-to-find-identify-large-files-commits-in-git-history