Jean-Christophe Fillion-Robin jcfr

## 3613-test-slicer-midas-upload.cmake

#
# For example:
#
#   cmake -DSlicer_SOURCE_DIR:PATH=/home/jchris/Projects/Slicer -DPACKAGE_FILEPATH:FILEPATH=/home/jchris/Projects/Slicer/Resources/3DSlicer-DesktopIcon.png  -P  3613-test-slicer-midas-upload.cmake
#

if(NOT EXISTS "${Slicer_SOURCE_DIR}")
  message(FATAL_ERROR "Make sure to run this script passing -DSlicer_SOURCE_DIR:PATH=/path/to/Slicer")
endif()

## get-pip.py
#!/usr/bin/env python
#
# Hi There!
# You may be wondering what this giant blob of binary data here is, you might
# even be worried that we're up to something nefarious (good for you for being
# paranoid!). This is a base85 encoding of a zip file, this zip file contains
# an entire copy of pip (version 19.0.3).
#
# Pip is a thing that installs packages, pip itself is a package that someone
# might want to install, especially if they're looking to run this get-pip.py

## vtkITKTransformInverse.h
// PR#1096
// https://github.com/Slicer/Slicer/pull/1096/commits/5d8cce93acfcd9504e98cb318e1ddff92afea723#diff-685fe5dc92e213efacb56c685635f8a7
/*=========================================================================

  Program:   Visualization Toolkit
  Module:    $RCSfile: vtkITKTransformInverse.h,v $

  Copyright (c) Ken Martin, Will Schroeder, Bill Lorensen
  All rights reserved.
  See Copyright.txt or http://www.kitware.com/Copyright.htm for details.

## maker_layer_structures.py
from allensdk.api.queries.rma_api import RmaApi
import allensdk.core.json_utilities as ju


all_structs = []

root = RmaApi().model_query("Structure", criteria="[graph_id$eq1],[acronym$eqgrey]")[0]

all_structs.append(root)

## dmctk-CMakeCache.txt
# This is the CMakeCache file.
# For build in directory: /work/Slicer-build/DCMTK-build
# It was generated by CMake: /usr/bin/cmake
# You can edit this file to change values found and used by cmake.
# If you do not want to change any of the values, simply exit the editor.
# If you do want to change a value, simply edit, save, and exit the editor.
# The syntax for the file is as follows:
# KEY:TYPE=VALUE
# KEY is the name of a variable in the cache.
# TYPE is a hint to GUIs for the type of VALUE, DO NOT EDIT TYPE!.

## .gitignore
ExtensionsIndex
generated
tmp

## CMakeLists.txt

cmake_minimum_required(VERSION 3.12)

project(Test LANGUAGES CXX)

# launcher executable
set(CTKAppLauncher_EXECUTABLE ${CMAKE_CURRENT_BINARY_DIR}/fake_launcher_executable)
file(WRITE ${CTKAppLauncher_EXECUTABLE} "")

# application and executable name

## Dockerfile
#FROM quay.io/pypa/manylinux1_x86_64
FROM dockcross/manylinux-x64
# FROM quay.io/pypa/manylinux1_i686
# Includes glibc 2.5

RUN mkdir /build
WORKDIR /build

RUN yum install -y \
    # for easier development

## verify_cmake_check_for_bad_ssl_cert.cmake
#
# slicer_check_cmake_https
#
# Check if CMake supports downloading files using the HTTPS protocol. Fail if
# HTTPS is unsupported.
#
# CMake should support HTTPS when compiled with CMAKE_USE_OPENSSL enabled.
#
# Based on the script created by Jean-Christophe Fillion-Robin:
# https://gist.github.com/jcfr/e88a2a7cbc4ddd235186

## cronjob_docker_cleanup.sh
#!/bin/bash

#
# This script maintained at https://gist.github.com/jcfr/0bb9b695a5f1511a4b66f9e872d44743
#

#
# Source: https://lebkowski.name/docker-volumes/#recap
#

	#
	# For example:
	#
	# cmake -DSlicer_SOURCE_DIR:PATH=/home/jchris/Projects/Slicer -DPACKAGE_FILEPATH:FILEPATH=/home/jchris/Projects/Slicer/Resources/3DSlicer-DesktopIcon.png -P 3613-test-slicer-midas-upload.cmake
	#

	if(NOT EXISTS "${Slicer_SOURCE_DIR}")
	message(FATAL_ERROR "Make sure to run this script passing -DSlicer_SOURCE_DIR:PATH=/path/to/Slicer")
	endif()
	#!/usr/bin/env python
	#
	# Hi There!
	# You may be wondering what this giant blob of binary data here is, you might
	# even be worried that we're up to something nefarious (good for you for being
	# paranoid!). This is a base85 encoding of a zip file, this zip file contains
	# an entire copy of pip (version 19.0.3).
	#
	# Pip is a thing that installs packages, pip itself is a package that someone
	# might want to install, especially if they're looking to run this get-pip.py
	// PR#1096
	// https://github.com/Slicer/Slicer/pull/1096/commits/5d8cce93acfcd9504e98cb318e1ddff92afea723#diff-685fe5dc92e213efacb56c685635f8a7
	/*=========================================================================

	Program: Visualization Toolkit
	Module: $RCSfile: vtkITKTransformInverse.h,v $

	Copyright (c) Ken Martin, Will Schroeder, Bill Lorensen
	All rights reserved.
	See Copyright.txt or http://www.kitware.com/Copyright.htm for details.
	from allensdk.api.queries.rma_api import RmaApi
	import allensdk.core.json_utilities as ju


	all_structs = []

	root = RmaApi().model_query("Structure", criteria="[graph_id$eq1],[acronym$eqgrey]")[0]

	all_structs.append(root)
	# This is the CMakeCache file.
	# For build in directory: /work/Slicer-build/DCMTK-build
	# It was generated by CMake: /usr/bin/cmake
	# You can edit this file to change values found and used by cmake.
	# If you do not want to change any of the values, simply exit the editor.
	# If you do want to change a value, simply edit, save, and exit the editor.
	# The syntax for the file is as follows:
	# KEY:TYPE=VALUE
	# KEY is the name of a variable in the cache.
	# TYPE is a hint to GUIs for the type of VALUE, DO NOT EDIT TYPE!.

	cmake_minimum_required(VERSION 3.12)

	project(Test LANGUAGES CXX)

	# launcher executable
	set(CTKAppLauncher_EXECUTABLE ${CMAKE_CURRENT_BINARY_DIR}/fake_launcher_executable)
	file(WRITE ${CTKAppLauncher_EXECUTABLE} "")

	# application and executable name
	#FROM quay.io/pypa/manylinux1_x86_64
	FROM dockcross/manylinux-x64
	# FROM quay.io/pypa/manylinux1_i686
	# Includes glibc 2.5

	RUN mkdir /build
	WORKDIR /build

	RUN yum install -y \
	# for easier development
	#
	# slicer_check_cmake_https
	#
	# Check if CMake supports downloading files using the HTTPS protocol. Fail if
	# HTTPS is unsupported.
	#
	# CMake should support HTTPS when compiled with CMAKE_USE_OPENSSL enabled.
	#
	# Based on the script created by Jean-Christophe Fillion-Robin:
	# https://gist.github.com/jcfr/e88a2a7cbc4ddd235186
	#!/bin/bash

	#
	# This script maintained at https://gist.github.com/jcfr/0bb9b695a5f1511a4b66f9e872d44743
	#

	#
	# Source: https://lebkowski.name/docker-volumes/#recap
	#