gistfile1.txt

[swinbank@lsst-dev01 pipelines_lsst_io (master)]$ pip install -r requirements.txt
Collecting documenteer[pipelines]==0.4.2 (from -r requirements.txt (line 1))
  Downloading https://files.pythonhosted.org/packages/e7/14/fbafa9d199dca07690521d6bd549851c30752320ecb9307aaf6d0cefaca9/documenteer-0.4.2-py3-none-any.whl (57kB)
    100% |████████████████████████████████| 61kB 4.9MB/s
Collecting sphinx-prompt (from documenteer[pipelines]==0.4.2->-r requirements.txt (line 1))
Requirement already satisfied: requests in /software/lsstsw/stack_20181012/stack/miniconda3-4.5.4-fcd27eb/Linux64/requests/2.9.1.lsst1+4/lib/python/requests-2.9.1-py3.6.egg (from documenteer[pipelines]==0.4.2->-r requirements.txt (line 1)) (2.9.1)
Collecting Sphinx<1.8.0,>=1.7.0 (from documenteer[pipelines]==0.4.2->-r requirements.txt (line 1))
  Using cached https://files.pythonhosted.org/packages/90/f9/a0babe32c78480994e4f1b93315558f5ed756104054a7029c672a8d77b72/Sphinx-1.7.9-py2.py3-none-any.whl
Requirement already satisfied: PyYAML in /software/lsstsw/stack_20181012/stack/miniconda3-4.5.4-fcd27eb/Linux64/pyyaml/3.13/lib/python (from documenteer[pipelines]==0.4.2->-r requirements.txt (line 1)) (3.13)
Collecting click<7.0,>=6.7 (from documenteer[pipelines]==0.4.2->-r requirements.txt (line 1))
  Using cached https://files.pythonhosted.org/packages/34/c1/8806f99713ddb993c5366c362b2f908f18269f8d792aff1abfd700775a77/click-6.7-py2.py3-none-any.whl
Collecting GitPython (from documenteer[pipelines]==0.4.2->-r requirements.txt (line 1))
  Using cached https://files.pythonhosted.org/packages/fe/e5/fafe827507644c32d6dc553a1c435cdf882e0c28918a5bab29f7fbebfb70/GitPython-2.1.11-py2.py3-none-any.whl
Collecting lsst-sphinx-bootstrap-theme<0.3.0,>=0.2.0; extra == "pipelines" (from documenteer[pipelines]==0.4.2->-r requirements.txt (line 1))
Collecting numpydoc<0.9.0,>=0.8.0; extra == "pipelines" (from documenteer[pipelines]==0.4.2->-r requirements.txt (line 1))
Collecting sphinx-automodapi<0.8,>=0.7; extra == "pipelines" (from documenteer[pipelines]==0.4.2->-r requirements.txt (line 1))
  Using cached https://files.pythonhosted.org/packages/c6/be/7b24d806568a76d839f4ae0e84edcb71b7e5aa0f958d5bf35ec76acad648/sphinx_automodapi-0.7-py2.py3-none-any.whl
Collecting breathe==4.4.0; extra == "pipelines" (from documenteer[pipelines]==0.4.2->-r requirements.txt (line 1))
  Using cached https://files.pythonhosted.org/packages/fb/a7/4b472db6f8b6755fca97c98aa4ffb874bbcbbbe1ac36b243baaf0538fdeb/breathe-4.4.0-py2.py3-none-any.whl
Requirement already satisfied: pygments in /software/lsstsw/stack_20181012/python/miniconda3-4.5.4/envs/lsst-scipipe/lib/python3.6/site-packages (from sphinx-prompt->documenteer[pipelines]==0.4.2->-r requirements.txt (line 1)) (2.2.0)
Collecting packaging (from Sphinx<1.8.0,>=1.7.0->documenteer[pipelines]==0.4.2->-r requirements.txt (line 1))
  Downloading https://files.pythonhosted.org/packages/91/32/58bc30e646e55eab8b21abf89e353f59c0cc02c417e42929f4a9546e1b1d/packaging-19.0-py2.py3-none-any.whl
Collecting imagesize (from Sphinx<1.8.0,>=1.7.0->documenteer[pipelines]==0.4.2->-r requirements.txt (line 1))
  Using cached https://files.pythonhosted.org/packages/fc/b6/aef66b4c52a6ad6ac18cf6ebc5731ed06d8c9ae4d3b2d9951f261150be67/imagesize-1.1.0-py2.py3-none-any.whl
Requirement already satisfied: setuptools in /software/lsstsw/stack_20181012/python/miniconda3-4.5.4/envs/lsst-scipipe/lib/python3.6/site-packages (from Sphinx<1.8.0,>=1.7.0->documenteer[pipelines]==0.4.2->-r requirements.txt (line 1)) (39.2.0)
Requirement already satisfied: Jinja2>=2.3 in /software/lsstsw/stack_20181012/python/miniconda3-4.5.4/envs/lsst-scipipe/lib/python3.6/site-packages (from Sphinx<1.8.0,>=1.7.0->documenteer[pipelines]==0.4.2->-r requirements.txt (line 1)) (2.9.6)
Collecting alabaster<0.8,>=0.7 (from Sphinx<1.8.0,>=1.7.0->documenteer[pipelines]==0.4.2->-r requirements.txt (line 1))
  Using cached https://files.pythonhosted.org/packages/10/ad/00b090d23a222943eb0eda509720a404f531a439e803f6538f35136cae9e/alabaster-0.7.12-py2.py3-none-any.whl
Collecting docutils>=0.11 (from Sphinx<1.8.0,>=1.7.0->documenteer[pipelines]==0.4.2->-r requirements.txt (line 1))
  Using cached https://files.pythonhosted.org/packages/36/fa/08e9e6e0e3cbd1d362c3bbee8d01d0aedb2155c4ac112b19ef3cae8eed8d/docutils-0.14-py3-none-any.whl
Collecting sphinxcontrib-websupport (from Sphinx<1.8.0,>=1.7.0->documenteer[pipelines]==0.4.2->-r requirements.txt (line 1))
  Using cached https://files.pythonhosted.org/packages/52/69/3c2fbdc3702358c5b34ee25e387b24838597ef099761fc9a42c166796e8f/sphinxcontrib_websupport-1.1.0-py2.py3-none-any.whl
Collecting babel!=2.0,>=1.3 (from Sphinx<1.8.0,>=1.7.0->documenteer[pipelines]==0.4.2->-r requirements.txt (line 1))
  Using cached https://files.pythonhosted.org/packages/b8/ad/c6f60602d3ee3d92fbed87675b6fb6a6f9a38c223343ababdb44ba201f10/Babel-2.6.0-py2.py3-none-any.whl
Requirement already satisfied: six>=1.5 in /software/lsstsw/stack_20181012/python/miniconda3-4.5.4/envs/lsst-scipipe/lib/python3.6/site-packages (from Sphinx<1.8.0,>=1.7.0->documenteer[pipelines]==0.4.2->-r requirements.txt (line 1)) (1.11.0)
Collecting snowballstemmer>=1.1 (from Sphinx<1.8.0,>=1.7.0->documenteer[pipelines]==0.4.2->-r requirements.txt (line 1))
  Using cached https://files.pythonhosted.org/packages/d4/6c/8a935e2c7b54a37714656d753e4187ee0631988184ed50c0cf6476858566/snowballstemmer-1.2.1-py2.py3-none-any.whl
Collecting gitdb2>=2.0.0 (from GitPython->documenteer[pipelines]==0.4.2->-r requirements.txt (line 1))
  Using cached https://files.pythonhosted.org/packages/da/30/a407568aa8d8f25db817cf50121a958722f3fc5f87e3a6fba1f40c0633e3/gitdb2-2.0.5-py2.py3-none-any.whl
Requirement already satisfied: pyparsing>=2.0.2 in /software/lsstsw/stack_20181012/python/miniconda3-4.5.4/envs/lsst-scipipe/lib/python3.6/site-packages (from packaging->Sphinx<1.8.0,>=1.7.0->documenteer[pipelines]==0.4.2->-r requirements.txt (line 1)) (2.2.0)
Requirement already satisfied: MarkupSafe>=0.23 in /software/lsstsw/stack_20181012/python/miniconda3-4.5.4/envs/lsst-scipipe/lib/python3.6/site-packages (from Jinja2>=2.3->Sphinx<1.8.0,>=1.7.0->documenteer[pipelines]==0.4.2->-r requirements.txt (line 1)) (1.0)
Requirement already satisfied: pytz>=0a in /software/lsstsw/stack_20181012/python/miniconda3-4.5.4/envs/lsst-scipipe/lib/python3.6/site-packages (from babel!=2.0,>=1.3->Sphinx<1.8.0,>=1.7.0->documenteer[pipelines]==0.4.2->-r requirements.txt (line 1)) (2018.5)
Collecting smmap2>=2.0.0 (from gitdb2>=2.0.0->GitPython->documenteer[pipelines]==0.4.2->-r requirements.txt (line 1))
  Using cached https://files.pythonhosted.org/packages/55/d2/866d45e3a121ee15a1dc013824d58072fd5c7799c9c34d01378eb262ca8f/smmap2-2.0.5-py2.py3-none-any.whl
Installing collected packages: packaging, imagesize, alabaster, docutils, sphinxcontrib-websupport, babel, snowballstemmer, Sphinx, sphinx-prompt, click, smmap2, gitdb2, GitPython, lsst-sphinx-bootstrap-theme, numpydoc, sphinx-automodapi, breathe, documenteer
Successfully installed GitPython-2.1.11 Sphinx-1.7.9 alabaster-0.7.12 babel-2.6.0 breathe-4.4.0 click-6.7 documenteer-0.4.2 docutils-0.14 gitdb2-2.0.5 imagesize-1.1.0 lsst-sphinx-bootstrap-theme-0.2.0 numpydoc-0.8.0 packaging-19.0 smmap2-2.0.5 snowballstemmer-1.2.1 sphinx-automodapi-0.7 sphinx-prompt-1.0.0 sphinxcontrib-websupport-1.1.0
You are using pip version 10.0.1, however version 19.0.1 is available.
You should consider upgrading via the 'pip install --upgrade pip' command.
[swinbank@lsst-dev01 pipelines_lsst_io (master)]$ stack-docs build
Creating modules/ dir at /ssd/swinbank/pipelines_lsst_io/modules
Creating packages/ dir at /ssd/swinbank/pipelines_lsst_io/packages
Deleting any existing _static/ symlinks
_static doc dir not found: /software/lsstsw/stack_20181012/stack/miniconda3-4.5.4-fcd27eb/Linux64/ip_isr/16.0-20-g8d11721+2/doc/_static/ip_isr
Linking /ssd/swinbank/pipelines_lsst_io/modules/lsst.ip.isr -> /software/lsstsw/stack_20181012/stack/miniconda3-4.5.4-fcd27eb/Linux64/ip_isr/16.0-20-g8d11721+2/doc/lsst.ip.isr
Linking /ssd/swinbank/pipelines_lsst_io/packages/ip_isr -> /software/lsstsw/stack_20181012/stack/miniconda3-4.5.4-fcd27eb/Linux64/ip_isr/16.0-20-g8d11721+2/doc/ip_isr
Linking /ssd/swinbank/pipelines_lsst_io/modules/lsst.ctrl.mpexec -> /software/lsstsw/stack_20181012/stack/miniconda3-4.5.4-fcd27eb/Linux64/ctrl_mpexec/master-g53f50ade4d+6/doc/lsst.ctrl.mpexec
Linking /ssd/swinbank/pipelines_lsst_io/modules/lsst.ap.pipe -> /software/lsstsw/stack_20181012/stack/miniconda3-4.5.4-fcd27eb/Linux64/ap_pipe/master-g720764c253+4/doc/lsst.ap.pipe
Linking /ssd/swinbank/pipelines_lsst_io/modules/lsst.ap.association -> /software/lsstsw/stack_20181012/stack/miniconda3-4.5.4-fcd27eb/Linux64/ap_association/master-gd9d6fc47a6+4/doc/lsst.ap.association
Linking /ssd/swinbank/pipelines_lsst_io/modules/lsst.jointcal -> /software/lsstsw/stack_20181012/stack/miniconda3-4.5.4-fcd27eb/Linux64/jointcal/16.0-29-g44d5b4c/doc/lsst.jointcal
Linking /ssd/swinbank/pipelines_lsst_io/packages/jointcal -> /software/lsstsw/stack_20181012/stack/miniconda3-4.5.4-fcd27eb/Linux64/jointcal/16.0-29-g44d5b4c/doc/jointcal
module doc dir not found: /software/lsstsw/stack_20181012/stack/miniconda3-4.5.4-fcd27eb/Linux64/meas_extensions_photometryKron/16.0-6-gf49912c+44/doc/lsst.meas.extensions_photometryKron
_static doc dir not found: /software/lsstsw/stack_20181012/stack/miniconda3-4.5.4-fcd27eb/Linux64/meas_extensions_photometryKron/16.0-6-gf49912c+44/doc/_static/meas_extensions_photometryKron
Linking /ssd/swinbank/pipelines_lsst_io/packages/meas_extensions_photometryKron -> /software/lsstsw/stack_20181012/stack/miniconda3-4.5.4-fcd27eb/Linux64/meas_extensions_photometryKron/16.0-6-gf49912c+44/doc/meas_extensions_photometryKron
_static doc dir not found: /software/lsstsw/stack_20181012/stack/miniconda3-4.5.4-fcd27eb/Linux64/display_ds9/16.0-2-g9d5294e+76/doc/_static/display_ds9
Linking /ssd/swinbank/pipelines_lsst_io/modules/lsst.display.ds9 -> /software/lsstsw/stack_20181012/stack/miniconda3-4.5.4-fcd27eb/Linux64/display_ds9/16.0-2-g9d5294e+76/doc/lsst.display.ds9
Linking /ssd/swinbank/pipelines_lsst_io/packages/display_ds9 -> /software/lsstsw/stack_20181012/stack/miniconda3-4.5.4-fcd27eb/Linux64/display_ds9/16.0-2-g9d5294e+76/doc/display_ds9
_static doc dir not found: /software/lsstsw/stack_20181012/stack/miniconda3-4.5.4-fcd27eb/Linux64/meas_extensions_simpleShape/16.0-5-gb3f8a4b+101/doc/_static/meas_extensions_simpleShape
Linking /ssd/swinbank/pipelines_lsst_io/modules/lsst.meas.extensions.simpleShape -> /software/lsstsw/stack_20181012/stack/miniconda3-4.5.4-fcd27eb/Linux64/meas_extensions_simpleShape/16.0-5-gb3f8a4b+101/doc/lsst.meas.extensions.simpleShape
Linking /ssd/swinbank/pipelines_lsst_io/packages/meas_extensions_simpleShape -> /software/lsstsw/stack_20181012/stack/miniconda3-4.5.4-fcd27eb/Linux64/meas_extensions_simpleShape/16.0-5-gb3f8a4b+101/doc/meas_extensions_simpleShape
_static doc dir not found: /software/lsstsw/stack_20181012/stack/miniconda3-4.5.4-fcd27eb/Linux64/meas_algorithms/16.0-25-g723f23e8+2/doc/_static/meas_algorithms
Linking /ssd/swinbank/pipelines_lsst_io/modules/lsst.meas.algorithms -> /software/lsstsw/stack_20181012/stack/miniconda3-4.5.4-fcd27eb/Linux64/meas_algorithms/16.0-25-g723f23e8+2/doc/lsst.meas.algorithms
Linking /ssd/swinbank/pipelines_lsst_io/packages/meas_algorithms -> /software/lsstsw/stack_20181012/stack/miniconda3-4.5.4-fcd27eb/Linux64/meas_algorithms/16.0-25-g723f23e8+2/doc/meas_algorithms
_static doc dir not found: /software/lsstsw/stack_20181012/stack/miniconda3-4.5.4-fcd27eb/Linux64/astro_metadata_translator/master-g24fba81b13/doc/_static/astro_metadata_translator
Linking /ssd/swinbank/pipelines_lsst_io/packages/astro_metadata_translator -> /software/lsstsw/stack_20181012/stack/miniconda3-4.5.4-fcd27eb/Linux64/astro_metadata_translator/master-g24fba81b13/doc/astro_metadata_translator
package doc dir excluded or not found: /software/lsstsw/stack_20181012/stack/miniconda3-4.5.4-fcd27eb/Linux64/meas_extensions_psfex/16.0-12-g71e5ef5+10/doc/meas_extensions_psfex
_static doc dir not found: /software/lsstsw/stack_20181012/stack/miniconda3-4.5.4-fcd27eb/Linux64/meas_extensions_psfex/16.0-12-g71e5ef5+10/doc/_static/meas_extensions_psfex
Linking /ssd/swinbank/pipelines_lsst_io/modules/lsst.meas.extensions.psfex -> /software/lsstsw/stack_20181012/stack/miniconda3-4.5.4-fcd27eb/Linux64/meas_extensions_psfex/16.0-12-g71e5ef5+10/doc/lsst.meas.extensions.psfex
_static doc dir not found: /software/lsstsw/stack_20181012/stack/miniconda3-4.5.4-fcd27eb/Linux64/meas_deblender/16.0-12-g5c924a4+21/doc/_static/meas_deblender
Linking /ssd/swinbank/pipelines_lsst_io/modules/lsst.meas.deblender -> /software/lsstsw/stack_20181012/stack/miniconda3-4.5.4-fcd27eb/Linux64/meas_deblender/16.0-12-g5c924a4+21/doc/lsst.meas.deblender
Linking /ssd/swinbank/pipelines_lsst_io/packages/meas_deblender -> /software/lsstsw/stack_20181012/stack/miniconda3-4.5.4-fcd27eb/Linux64/meas_deblender/16.0-12-g5c924a4+21/doc/meas_deblender
module doc dir not found: /software/lsstsw/stack_20181012/stack/miniconda3-4.5.4-fcd27eb/Linux64/daf_butler/master-g5d5c9ddccc/doc/lsst.daf.butler.core
module doc dir not found: /software/lsstsw/stack_20181012/stack/miniconda3-4.5.4-fcd27eb/Linux64/daf_butler/master-g5d5c9ddccc/doc/lsst.daf.butler.ci_hsc
module doc dir not found: /software/lsstsw/stack_20181012/stack/miniconda3-4.5.4-fcd27eb/Linux64/daf_butler/master-g5d5c9ddccc/doc/lsst.daf.butler.datastores
module doc dir not found: /software/lsstsw/stack_20181012/stack/miniconda3-4.5.4-fcd27eb/Linux64/daf_butler/master-g5d5c9ddccc/doc/lsst.daf.butler.formatters
module doc dir not found: /software/lsstsw/stack_20181012/stack/miniconda3-4.5.4-fcd27eb/Linux64/daf_butler/master-g5d5c9ddccc/doc/lsst.daf.butler.registries
_static doc dir not found: /software/lsstsw/stack_20181012/stack/miniconda3-4.5.4-fcd27eb/Linux64/daf_butler/master-g5d5c9ddccc/doc/_static/daf_butler
Linking /ssd/swinbank/pipelines_lsst_io/modules/lsst.daf.butler -> /software/lsstsw/stack_20181012/stack/miniconda3-4.5.4-fcd27eb/Linux64/daf_butler/master-g5d5c9ddccc/doc/lsst.daf.butler
Linking /ssd/swinbank/pipelines_lsst_io/packages/daf_butler -> /software/lsstsw/stack_20181012/stack/miniconda3-4.5.4-fcd27eb/Linux64/daf_butler/master-g5d5c9ddccc/doc/daf_butler
_static doc dir not found: /software/lsstsw/stack_20181012/stack/miniconda3-4.5.4-fcd27eb/Linux64/cp_pipe/16.0-5-g27fb78a+20/doc/_static/cp_pipe
Linking /ssd/swinbank/pipelines_lsst_io/modules/lsst.cp.pipe -> /software/lsstsw/stack_20181012/stack/miniconda3-4.5.4-fcd27eb/Linux64/cp_pipe/16.0-5-g27fb78a+20/doc/lsst.cp.pipe
Linking /ssd/swinbank/pipelines_lsst_io/packages/cp_pipe -> /software/lsstsw/stack_20181012/stack/miniconda3-4.5.4-fcd27eb/Linux64/cp_pipe/16.0-5-g27fb78a+20/doc/cp_pipe
_static doc dir not found: /software/lsstsw/stack_20181012/stack/miniconda3-4.5.4-fcd27eb/Linux64/meas_modelfit/16.0-18-gcf94535+13/doc/_static/meas_modelfit
Linking /ssd/swinbank/pipelines_lsst_io/modules/lsst.meas.modelfit -> /software/lsstsw/stack_20181012/stack/miniconda3-4.5.4-fcd27eb/Linux64/meas_modelfit/16.0-18-gcf94535+13/doc/lsst.meas.modelfit
Linking /ssd/swinbank/pipelines_lsst_io/packages/meas_modelfit -> /software/lsstsw/stack_20181012/stack/miniconda3-4.5.4-fcd27eb/Linux64/meas_modelfit/16.0-18-gcf94535+13/doc/meas_modelfit
_static doc dir not found: /software/lsstsw/stack_20181012/stack/miniconda3-4.5.4-fcd27eb/Linux64/obs_test/16.0-11-g12e47bd+11/doc/_static/obs_test
Linking /ssd/swinbank/pipelines_lsst_io/modules/lsst.obs.test -> /software/lsstsw/stack_20181012/stack/miniconda3-4.5.4-fcd27eb/Linux64/obs_test/16.0-11-g12e47bd+11/doc/lsst.obs.test
Linking /ssd/swinbank/pipelines_lsst_io/packages/obs_test -> /software/lsstsw/stack_20181012/stack/miniconda3-4.5.4-fcd27eb/Linux64/obs_test/16.0-11-g12e47bd+11/doc/obs_test
_static doc dir not found: /software/lsstsw/stack_20181012/stack/miniconda3-4.5.4-fcd27eb/Linux64/obs_cfht/16.0-9-g8b21c43+7/doc/_static/obs_cfht
Linking /ssd/swinbank/pipelines_lsst_io/modules/lsst.obs.cfht -> /software/lsstsw/stack_20181012/stack/miniconda3-4.5.4-fcd27eb/Linux64/obs_cfht/16.0-9-g8b21c43+7/doc/lsst.obs.cfht
Linking /ssd/swinbank/pipelines_lsst_io/packages/obs_cfht -> /software/lsstsw/stack_20181012/stack/miniconda3-4.5.4-fcd27eb/Linux64/obs_cfht/16.0-9-g8b21c43+7/doc/obs_cfht
module doc dir not found: /software/lsstsw/stack_20181012/stack/miniconda3-4.5.4-fcd27eb/Linux64/geom/16.0-15-gdd5ca33+2/doc/lsst.geom
package doc dir excluded or not found: /software/lsstsw/stack_20181012/stack/miniconda3-4.5.4-fcd27eb/Linux64/geom/16.0-15-gdd5ca33+2/doc/geom
_static doc dir not found: /software/lsstsw/stack_20181012/stack/miniconda3-4.5.4-fcd27eb/Linux64/geom/16.0-15-gdd5ca33+2/doc/_static/geom
Linking /ssd/swinbank/pipelines_lsst_io/modules/lsst.shapelet -> /software/lsstsw/stack_20181012/stack/miniconda3-4.5.4-fcd27eb/Linux64/shapelet/16.0-8-g3a9f023+27/doc/lsst.shapelet
Linking /ssd/swinbank/pipelines_lsst_io/packages/shapelet -> /software/lsstsw/stack_20181012/stack/miniconda3-4.5.4-fcd27eb/Linux64/shapelet/16.0-8-g3a9f023+27/doc/shapelet
_static doc dir not found: /software/lsstsw/stack_20181012/stack/miniconda3-4.5.4-fcd27eb/Linux64/meas_extensions_shapeHSM/16.0-6-gfda48a7+83/doc/_static/meas_extensions_shapeHSM
Linking /ssd/swinbank/pipelines_lsst_io/modules/lsst.meas.extensions.shapeHSM -> /software/lsstsw/stack_20181012/stack/miniconda3-4.5.4-fcd27eb/Linux64/meas_extensions_shapeHSM/16.0-6-gfda48a7+83/doc/lsst.meas.extensions.shapeHSM
Linking /ssd/swinbank/pipelines_lsst_io/packages/meas_extensions_shapeHSM -> /software/lsstsw/stack_20181012/stack/miniconda3-4.5.4-fcd27eb/Linux64/meas_extensions_shapeHSM/16.0-6-gfda48a7+83/doc/meas_extensions_shapeHSM
_static doc dir not found: /software/lsstsw/stack_20181012/stack/miniconda3-4.5.4-fcd27eb/Linux64/utils/16.0-16-gf0259e2+1/doc/_static/utils
Linking /ssd/swinbank/pipelines_lsst_io/modules/lsst.utils -> /software/lsstsw/stack_20181012/stack/miniconda3-4.5.4-fcd27eb/Linux64/utils/16.0-16-gf0259e2+1/doc/lsst.utils
Linking /ssd/swinbank/pipelines_lsst_io/packages/utils -> /software/lsstsw/stack_20181012/stack/miniconda3-4.5.4-fcd27eb/Linux64/utils/16.0-16-gf0259e2+1/doc/utils
Linking /ssd/swinbank/pipelines_lsst_io/modules/lsst.pex.config -> /software/lsstsw/stack_20181012/stack/miniconda3-4.5.4-fcd27eb/Linux64/pex_config/16.0-10-g9d3e444/doc/lsst.pex.config
_static doc dir not found: /software/lsstsw/stack_20181012/stack/miniconda3-4.5.4-fcd27eb/Linux64/validate_drp/16.0-16-g58b607b+18/doc/_static/validate_drp
Linking /ssd/swinbank/pipelines_lsst_io/modules/lsst.validate.drp -> /software/lsstsw/stack_20181012/stack/miniconda3-4.5.4-fcd27eb/Linux64/validate_drp/16.0-16-g58b607b+18/doc/lsst.validate.drp
Linking /ssd/swinbank/pipelines_lsst_io/packages/validate_drp -> /software/lsstsw/stack_20181012/stack/miniconda3-4.5.4-fcd27eb/Linux64/validate_drp/16.0-16-g58b607b+18/doc/validate_drp
_static doc dir not found: /software/lsstsw/stack_20181012/stack/miniconda3-4.5.4-fcd27eb/Linux64/log/16.0-4-g6d309fa/doc/_static/log
Linking /ssd/swinbank/pipelines_lsst_io/modules/lsst.log -> /software/lsstsw/stack_20181012/stack/miniconda3-4.5.4-fcd27eb/Linux64/log/16.0-4-g6d309fa/doc/lsst.log
Linking /ssd/swinbank/pipelines_lsst_io/packages/log -> /software/lsstsw/stack_20181012/stack/miniconda3-4.5.4-fcd27eb/Linux64/log/16.0-4-g6d309fa/doc/log
package doc dir excluded or not found: /software/lsstsw/stack_20181012/stack/miniconda3-4.5.4-fcd27eb/Linux64/display_firefly/16.0-10-gb7df26b+3/doc/display_firefly
Linking /ssd/swinbank/pipelines_lsst_io/modules/lsst.display.firefly -> /software/lsstsw/stack_20181012/stack/miniconda3-4.5.4-fcd27eb/Linux64/display_firefly/16.0-10-gb7df26b+3/doc/lsst.display.firefly
Linking /ssd/swinbank/pipelines_lsst_io/_static/display_firefly -> /software/lsstsw/stack_20181012/stack/miniconda3-4.5.4-fcd27eb/Linux64/display_firefly/16.0-10-gb7df26b+3/doc/_static/display_firefly
Linking /ssd/swinbank/pipelines_lsst_io/modules/lsst.dax.ppdb -> /software/lsstsw/stack_20181012/stack/miniconda3-4.5.4-fcd27eb/Linux64/dax_ppdb/master-g5605b1aa4d+2/doc/lsst.dax.ppdb
_static doc dir not found: /software/lsstsw/stack_20181012/stack/miniconda3-4.5.4-fcd27eb/Linux64/synpipe/16.0-6-gcbc7b31+58/doc/_static/synpipe
Linking /ssd/swinbank/pipelines_lsst_io/modules/lsst.synpipe -> /software/lsstsw/stack_20181012/stack/miniconda3-4.5.4-fcd27eb/Linux64/synpipe/16.0-6-gcbc7b31+58/doc/lsst.synpipe
Linking /ssd/swinbank/pipelines_lsst_io/packages/synpipe -> /software/lsstsw/stack_20181012/stack/miniconda3-4.5.4-fcd27eb/Linux64/synpipe/16.0-6-gcbc7b31+58/doc/synpipe
_static doc dir not found: /software/lsstsw/stack_20181012/stack/miniconda3-4.5.4-fcd27eb/Linux64/base/16.0-6-g9321be7+5/doc/_static/base
Linking /ssd/swinbank/pipelines_lsst_io/modules/lsst.base -> /software/lsstsw/stack_20181012/stack/miniconda3-4.5.4-fcd27eb/Linux64/base/16.0-6-g9321be7+5/doc/lsst.base
Linking /ssd/swinbank/pipelines_lsst_io/modules/lsstDebug -> /software/lsstsw/stack_20181012/stack/miniconda3-4.5.4-fcd27eb/Linux64/base/16.0-6-g9321be7+5/doc/lsstDebug
Linking /ssd/swinbank/pipelines_lsst_io/packages/base -> /software/lsstsw/stack_20181012/stack/miniconda3-4.5.4-fcd27eb/Linux64/base/16.0-6-g9321be7+5/doc/base
package doc dir excluded or not found: /software/lsstsw/stack_20181012/stack/miniconda3-4.5.4-fcd27eb/Linux64/obs_decam/16.0-19-g9d290d5+13/doc/obs_decam
_static doc dir not found: /software/lsstsw/stack_20181012/stack/miniconda3-4.5.4-fcd27eb/Linux64/obs_decam/16.0-19-g9d290d5+13/doc/_static/obs_decam
Linking /ssd/swinbank/pipelines_lsst_io/modules/lsst.obs.decam -> /software/lsstsw/stack_20181012/stack/miniconda3-4.5.4-fcd27eb/Linux64/obs_decam/16.0-19-g9d290d5+13/doc/lsst.obs.decam
Linking /ssd/swinbank/pipelines_lsst_io/modules/lsst.meas.base -> /software/lsstsw/stack_20181012/stack/miniconda3-4.5.4-fcd27eb/Linux64/meas_base/16.0-19-g283fd30+1/doc/lsst.meas.base
Linking /ssd/swinbank/pipelines_lsst_io/modules/lsst.pipe.base -> /software/lsstsw/stack_20181012/stack/miniconda3-4.5.4-fcd27eb/Linux64/pipe_base/16.0-32-ga392cb8+2/doc/lsst.pipe.base
Linking /ssd/swinbank/pipelines_lsst_io/packages/pipe_base -> /software/lsstsw/stack_20181012/stack/miniconda3-4.5.4-fcd27eb/Linux64/pipe_base/16.0-32-ga392cb8+2/doc/pipe_base
Linking /ssd/swinbank/pipelines_lsst_io/_static/pipe_base -> /software/lsstsw/stack_20181012/stack/miniconda3-4.5.4-fcd27eb/Linux64/pipe_base/16.0-32-ga392cb8+2/doc/_static/pipe_base
_static doc dir not found: /software/lsstsw/stack_20181012/stack/miniconda3-4.5.4-fcd27eb/Linux64/afw/16.0-76-g802307b6d+2/doc/_static/afw
Linking /ssd/swinbank/pipelines_lsst_io/modules/lsst.afw.cameraGeom -> /software/lsstsw/stack_20181012/stack/miniconda3-4.5.4-fcd27eb/Linux64/afw/16.0-76-g802307b6d+2/doc/lsst.afw.cameraGeom
Linking /ssd/swinbank/pipelines_lsst_io/modules/lsst.afw.coord -> /software/lsstsw/stack_20181012/stack/miniconda3-4.5.4-fcd27eb/Linux64/afw/16.0-76-g802307b6d+2/doc/lsst.afw.coord
Linking /ssd/swinbank/pipelines_lsst_io/modules/lsst.afw.detection -> /software/lsstsw/stack_20181012/stack/miniconda3-4.5.4-fcd27eb/Linux64/afw/16.0-76-g802307b6d+2/doc/lsst.afw.detection
Linking /ssd/swinbank/pipelines_lsst_io/modules/lsst.afw.display -> /software/lsstsw/stack_20181012/stack/miniconda3-4.5.4-fcd27eb/Linux64/afw/16.0-76-g802307b6d+2/doc/lsst.afw.display
Linking /ssd/swinbank/pipelines_lsst_io/modules/lsst.afw.fits -> /software/lsstsw/stack_20181012/stack/miniconda3-4.5.4-fcd27eb/Linux64/afw/16.0-76-g802307b6d+2/doc/lsst.afw.fits
Linking /ssd/swinbank/pipelines_lsst_io/modules/lsst.afw.formatters -> /software/lsstsw/stack_20181012/stack/miniconda3-4.5.4-fcd27eb/Linux64/afw/16.0-76-g802307b6d+2/doc/lsst.afw.formatters
Linking /ssd/swinbank/pipelines_lsst_io/modules/lsst.afw.geom -> /software/lsstsw/stack_20181012/stack/miniconda3-4.5.4-fcd27eb/Linux64/afw/16.0-76-g802307b6d+2/doc/lsst.afw.geom
Linking /ssd/swinbank/pipelines_lsst_io/modules/lsst.afw.image -> /software/lsstsw/stack_20181012/stack/miniconda3-4.5.4-fcd27eb/Linux64/afw/16.0-76-g802307b6d+2/doc/lsst.afw.image
Linking /ssd/swinbank/pipelines_lsst_io/modules/lsst.afw.math -> /software/lsstsw/stack_20181012/stack/miniconda3-4.5.4-fcd27eb/Linux64/afw/16.0-76-g802307b6d+2/doc/lsst.afw.math
Linking /ssd/swinbank/pipelines_lsst_io/modules/lsst.afw.table -> /software/lsstsw/stack_20181012/stack/miniconda3-4.5.4-fcd27eb/Linux64/afw/16.0-76-g802307b6d+2/doc/lsst.afw.table
Linking /ssd/swinbank/pipelines_lsst_io/packages/afw -> /software/lsstsw/stack_20181012/stack/miniconda3-4.5.4-fcd27eb/Linux64/afw/16.0-76-g802307b6d+2/doc/afw
_static doc dir not found: /software/lsstsw/stack_20181012/stack/miniconda3-4.5.4-fcd27eb/Linux64/obs_sdss/16.0-7-g33965e3+59/doc/_static/obs_sdss
Linking /ssd/swinbank/pipelines_lsst_io/modules/lsst.obs.sdss -> /software/lsstsw/stack_20181012/stack/miniconda3-4.5.4-fcd27eb/Linux64/obs_sdss/16.0-7-g33965e3+59/doc/lsst.obs.sdss
Linking /ssd/swinbank/pipelines_lsst_io/packages/obs_sdss -> /software/lsstsw/stack_20181012/stack/miniconda3-4.5.4-fcd27eb/Linux64/obs_sdss/16.0-7-g33965e3+59/doc/obs_sdss
package doc dir excluded or not found: /software/lsstsw/stack_20181012/stack/miniconda3-4.5.4-fcd27eb/Linux64/skymap/16.0-10-gbd9fc95/doc/skymap
_static doc dir not found: /software/lsstsw/stack_20181012/stack/miniconda3-4.5.4-fcd27eb/Linux64/skymap/16.0-10-gbd9fc95/doc/_static/skymap
Linking /ssd/swinbank/pipelines_lsst_io/modules/lsst.skymap -> /software/lsstsw/stack_20181012/stack/miniconda3-4.5.4-fcd27eb/Linux64/skymap/16.0-10-gbd9fc95/doc/lsst.skymap
Linking /ssd/swinbank/pipelines_lsst_io/modules/lsst.meas.astrom -> /software/lsstsw/stack_20181012/stack/miniconda3-4.5.4-fcd27eb/Linux64/meas_astrom/16.0-23-g28ad22d+2/doc/lsst.meas.astrom
Linking /ssd/swinbank/pipelines_lsst_io/modules/lsst.obs.base -> /software/lsstsw/stack_20181012/stack/miniconda3-4.5.4-fcd27eb/Linux64/obs_base/16.0-32-gc794025+1/doc/lsst.obs.base
Linking /ssd/swinbank/pipelines_lsst_io/packages/obs_base -> /software/lsstsw/stack_20181012/stack/miniconda3-4.5.4-fcd27eb/Linux64/obs_base/16.0-32-gc794025+1/doc/obs_base
_static doc dir not found: /software/lsstsw/stack_20181012/stack/miniconda3-4.5.4-fcd27eb/Linux64/obs_lsstSim/16.0-9-g28cebc3+70/doc/_static/obs_lsstSim
Linking /ssd/swinbank/pipelines_lsst_io/modules/lsst.obs.lsstSim -> /software/lsstsw/stack_20181012/stack/miniconda3-4.5.4-fcd27eb/Linux64/obs_lsstSim/16.0-9-g28cebc3+70/doc/lsst.obs.lsstSim
Linking /ssd/swinbank/pipelines_lsst_io/packages/obs_lsstSim -> /software/lsstsw/stack_20181012/stack/miniconda3-4.5.4-fcd27eb/Linux64/obs_lsstSim/16.0-9-g28cebc3+70/doc/obs_lsstSim
_static doc dir not found: /software/lsstsw/stack_20181012/stack/miniconda3-4.5.4-fcd27eb/Linux64/pex_exceptions/16.0-4-ga3eb747+11/doc/_static/pex_exceptions
Linking /ssd/swinbank/pipelines_lsst_io/modules/lsst.pex.exceptions -> /software/lsstsw/stack_20181012/stack/miniconda3-4.5.4-fcd27eb/Linux64/pex_exceptions/16.0-4-ga3eb747+11/doc/lsst.pex.exceptions
Linking /ssd/swinbank/pipelines_lsst_io/packages/pex_exceptions -> /software/lsstsw/stack_20181012/stack/miniconda3-4.5.4-fcd27eb/Linux64/pex_exceptions/16.0-4-ga3eb747+11/doc/pex_exceptions
_static doc dir not found: /software/lsstsw/stack_20181012/stack/miniconda3-4.5.4-fcd27eb/Linux64/coadd_utils/16.0-5-g6a53317+47/doc/_static/coadd_utils
Linking /ssd/swinbank/pipelines_lsst_io/modules/lsst.coadd.utils -> /software/lsstsw/stack_20181012/stack/miniconda3-4.5.4-fcd27eb/Linux64/coadd_utils/16.0-5-g6a53317+47/doc/lsst.coadd.utils
Linking /ssd/swinbank/pipelines_lsst_io/packages/coadd_utils -> /software/lsstsw/stack_20181012/stack/miniconda3-4.5.4-fcd27eb/Linux64/coadd_utils/16.0-5-g6a53317+47/doc/coadd_utils
Linking /ssd/swinbank/pipelines_lsst_io/modules/lsst.verify -> /software/lsstsw/stack_20181012/stack/miniconda3-4.5.4-fcd27eb/Linux64/verify/16.0-9-ga476001+1/doc/lsst.verify
Linking /ssd/swinbank/pipelines_lsst_io/packages/verify -> /software/lsstsw/stack_20181012/stack/miniconda3-4.5.4-fcd27eb/Linux64/verify/16.0-9-ga476001+1/doc/verify
Linking /ssd/swinbank/pipelines_lsst_io/_static/verify -> /software/lsstsw/stack_20181012/stack/miniconda3-4.5.4-fcd27eb/Linux64/verify/16.0-9-ga476001+1/doc/_static/verify
Linking /ssd/swinbank/pipelines_lsst_io/modules/lsst.pipe.tasks -> /software/lsstsw/stack_20181012/stack/miniconda3-4.5.4-fcd27eb/Linux64/pipe_tasks/16.0-65-g12857137/doc/lsst.pipe.tasks
_static doc dir not found: /software/lsstsw/stack_20181012/stack/miniconda3-4.5.4-fcd27eb/Linux64/pipe_drivers/16.0-8-gc11f1cf+11/doc/_static/pipe_drivers
Linking /ssd/swinbank/pipelines_lsst_io/modules/lsst.pipe.drivers -> /software/lsstsw/stack_20181012/stack/miniconda3-4.5.4-fcd27eb/Linux64/pipe_drivers/16.0-8-gc11f1cf+11/doc/lsst.pipe.drivers
Linking /ssd/swinbank/pipelines_lsst_io/packages/pipe_drivers -> /software/lsstsw/stack_20181012/stack/miniconda3-4.5.4-fcd27eb/Linux64/pipe_drivers/16.0-8-gc11f1cf+11/doc/pipe_drivers
Linking /ssd/swinbank/pipelines_lsst_io/modules/lsst.ap.verify -> /software/lsstsw/stack_20181012/stack/miniconda3-4.5.4-fcd27eb/Linux64/ap_verify/master-g4698db16f3+1/doc/lsst.ap.verify
Linking /ssd/swinbank/pipelines_lsst_io/packages/verify_metrics -> /software/lsstsw/stack_20181012/stack/miniconda3-4.5.4-fcd27eb/Linux64/verify_metrics/16.0-4-gd6b74a9+2/doc/verify_metrics
_static doc dir not found: /software/lsstsw/stack_20181012/stack/miniconda3-4.5.4-fcd27eb/Linux64/ip_diffim/16.0-20-g42ca1a7/doc/_static/ip_diffim
Linking /ssd/swinbank/pipelines_lsst_io/modules/lsst.ip.diffim -> /software/lsstsw/stack_20181012/stack/miniconda3-4.5.4-fcd27eb/Linux64/ip_diffim/16.0-20-g42ca1a7/doc/lsst.ip.diffim
Linking /ssd/swinbank/pipelines_lsst_io/packages/ip_diffim -> /software/lsstsw/stack_20181012/stack/miniconda3-4.5.4-fcd27eb/Linux64/ip_diffim/16.0-20-g42ca1a7/doc/ip_diffim
Running Sphinx v1.7.9
making output directory...
loading pickled environment... not yet created
loading intersphinx inventory from https://docs.python.org/3/objects.inv...
loading intersphinx inventory from https://docs.scipy.org/doc/numpy/objects.inv...
loading intersphinx inventory from https://docs.scipy.org/doc/scipy/reference/objects.inv...
loading intersphinx inventory from https://matplotlib.org/objects.inv...
loading intersphinx inventory from http://scikit-learn.org/stable/objects.inv...
intersphinx inventory has moved: http://scikit-learn.org/stable/objects.inv -> https://scikit-learn.org/stable/objects.inv
loading intersphinx inventory from http://pandas.pydata.org/pandas-docs/stable/objects.inv...
loading intersphinx inventory from http://docs.astropy.org/en/v3.0.x/objects.inv...
[autosummary] generating autosummary for: getting-started/coaddition.rst, getting-started/data-setup.rst, getting-started/display.rst, getting-started/index.rst, getting-started/multiband-analysis.rst, getting-started/photometry.rst, getting-started/processccd.rst, index.rst, install/demo.rst, install/docker.rst, ..., releases/notes.rst, releases/tickets.rst, releases/v12_0.rst, releases/v12_0_qserv_dax.rst, releases/v13_0.rst, releases/v13_0_qserv_dax.rst, releases/v13_0_sui.rst, releases/v14_0.rst, releases/v15_0.rst, releases/v16_0.rst
cp.pipe __init__ WARN: eotest module not found; runEotestTask not available
[automodsumm] modules/lsst.display.ds9/index.rst: found 14 automodsumm entries to generate
[automodsumm] modules/lsst.ip.diffim/index.rst: found 98 automodsumm entries to generate
[automodsumm] modules/lsst.base/index.rst: found 13 automodsumm entries to generate
[automodsumm] modules/lsst.afw.coord/index.rst: found 4 automodsumm entries to generate
[automodsumm] modules/lsst.afw.geom/index.rst: found 44 automodsumm entries to generate
[automodsumm] modules/lsst.pex.config/index.rst: found 30 automodsumm entries to generate
[automodsumm] modules/lsst.afw.cameraGeom/index.rst: found 41 automodsumm entries to generate
[automodsumm] modules/lsst.jointcal/index.rst: found 53 automodsumm entries to generate
[automodsumm] modules/lsst.pipe.tasks/index.rst: found 6 automodsumm entries to generate
[automodsumm] modules/lsst.afw.math/index.rst: found 114 automodsumm entries to generate
[automodsumm] modules/lsst.meas.astrom/index.rst: found 40 automodsumm entries to generate
[automodsumm] modules/lsst.obs.decam/index.rst: found 2 automodsumm entries to generate
[automodsumm] packages/astro_metadata_translator/index.rst: found 11 automodsumm entries to generate
[automodsumm] modules/lsst.verify/index.rst: found 44 automodsumm entries to generate
[automodsumm] modules/lsst.obs.base/index.rst: found 11 automodsumm entries to generate
[automodsumm] modules/lsst.ap.verify/index.rst: found 6 automodsumm entries to generate
[automodsumm] modules/lsst.meas.extensions.psfex/index.rst: found 13 automodsumm entries to generate
[automodsumm] packages/obs_test/index.rst: found 7 automodsumm entries to generate
[automodsumm] modules/lsst.obs.cfht/index.rst: found 5 automodsumm entries to generate
[automodsumm] modules/lsst.meas.base/index.rst: found 130 automodsumm entries to generate
[automodsumm] modules/lsst.daf.butler/index.rst: found 85 automodsumm entries to generate
[automodsumm] modules/lsst.pipe.base/index.rst: found 37 automodsumm entries to generate
[automodsumm] modules/lsst.skymap/index.rst: found 18 automodsumm entries to generate
[automodsumm] modules/lsst.ap.pipe/index.rst: found 2 automodsumm entries to generate
[automodsumm] modules/lsst.utils/index.rst: found 16 automodsumm entries to generate
[automodsumm] modules/lsst.cp.pipe/index.rst: found 3 automodsumm entries to generate
[automodsumm] modules/lsst.ctrl.mpexec/index.rst: found 10 automodsumm entries to generate
[automodsumm] modules/lsst.afw.formatters/index.rst: found 2 automodsumm entries to generate
[automodsumm] modules/lsst.pex.exceptions/index.rst: found 18 automodsumm entries to generate
[automodsumm] modules/lsst.afw.display/index.rst: found 14 automodsumm entries to generate
[automodsumm] modules/lsst.ap.association/index.rst: found 10 automodsumm entries to generate
[automodsumm] modules/lsst.dax.ppdb/index.rst: found 11 automodsumm entries to generate
[automodsumm] modules/lsst.validate.drp/index.rst: found 36 automodsumm entries to generate
[automodsumm] modules/lsstDebug/index.rst: found 2 automodsumm entries to generate
[automodsumm] modules/lsst.shapelet/index.rst: found 28 automodsumm entries to generate
building [mo]: all of 0 po files
building [html]: all source files
updating environment: 1224 added, 0 changed, 0 removed
/ssd/swinbank/docs-venv/lib/python3.6/site-packages/numpydoc/docscrape.py:377: UserWarning: Unknown section Parameters: in the docstring of None in None.
  warn(msg)
/ssd/swinbank/docs-venv/lib/python3.6/site-packages/numpydoc/docscrape.py:377: UserWarning: Unknown section Returns: in the docstring of None in None.
  warn(msg)
/ssd/swinbank/docs-venv/lib/python3.6/site-packages/numpydoc/docscrape.py:377: UserWarning: Unknown section Parameters: in the docstring of <function calcBiasCorr at 0x7ff20a97d0d0> in /software/lsstsw/stack_20181012/stack/miniconda3-4.5.4-fcd27eb/Linux64/cp_pipe/16.0-5-g27fb78a+20/python/lsst/cp/pipe/makeBrighterFatterKernel.py.
  warn(msg)
/ssd/swinbank/docs-venv/lib/python3.6/site-packages/numpydoc/docscrape.py:377: UserWarning: Unknown section Returns: in the docstring of <function calcBiasCorr at 0x7ff20a97d0d0> in /software/lsstsw/stack_20181012/stack/miniconda3-4.5.4-fcd27eb/Linux64/cp_pipe/16.0-5-g27fb78a+20/python/lsst/cp/pipe/makeBrighterFatterKernel.py.
  warn(msg)
/ssd/swinbank/pipelines_lsst_io/modules/lsst.afw.detection/index.rst:19: WARNING: toctree contains reference to nonexisting document 'modules/lsst.afw.detection/: maxdepth: 1'
/ssd/swinbank/pipelines_lsst_io/modules/lsst.meas.base/index.rst:73: WARNING: Tried to skip objects {'ForcedFromGenericPlugin', 'SingleFrameFromGenericPlugin'} in module lsst.meas.base, but they were not present.  Ignoring.
/ssd/swinbank/pipelines_lsst_io/modules/lsst.meas.base/index.rst:81: WARNING: Tried to skip objects {'ForcedFromGenericPlugin', 'SingleFrameFromGenericPlugin'} in module lsst.meas.base, but they were not present.  Ignoring.
WARNING: Object <function MergeDetectionsTask.runDataRef at 0x7ff202857b70> doesn't have a docstring.
WARNING: :1: (WARNING/2) Inline interpreted text or phrase reference start-string without end-string.
WARNING: Object <function MergeDetectionsTask.runDataRef at 0x7ff202857b70> doesn't have a docstring.
WARNING: :1: (WARNING/2) Inline interpreted text or phrase reference start-string without end-string.
WARNING: :3: (ERROR/3) Unexpected indentation.
WARNING: :4: (WARNING/2) Block quote ends without a blank line; unexpected unindent.
WARNING: :6: (WARNING/2) Definition list ends without a blank line; unexpected unindent.

Traceback (most recent call last):
  File "/ssd/swinbank/docs-venv/lib/python3.6/site-packages/documenteer/sphinxrunner.py", line 85, in run_sphinx
    app.build(force_all, filenames)
  File "/ssd/swinbank/docs-venv/lib/python3.6/site-packages/sphinx/application.py", line 325, in build
    self.builder.build_all()
  File "/ssd/swinbank/docs-venv/lib/python3.6/site-packages/sphinx/builders/__init__.py", line 299, in build_all
    self.build(None, summary='all source files', method='all')
  File "/ssd/swinbank/docs-venv/lib/python3.6/site-packages/sphinx/builders/__init__.py", line 355, in build
    updated_docnames = set(self.env.update(self.config, self.srcdir, self.doctreedir))
  File "/ssd/swinbank/docs-venv/lib/python3.6/site-packages/sphinx/environment/__init__.py", line 568, in update
    self._read_serial(docnames, self.app)
  File "/ssd/swinbank/docs-venv/lib/python3.6/site-packages/sphinx/environment/__init__.py", line 587, in _read_serial
    self.read_doc(docname, app)
  File "/ssd/swinbank/docs-venv/lib/python3.6/site-packages/sphinx/environment/__init__.py", line 662, in read_doc
    doctree = read_doc(self.app, self, self.doc2path(docname))
  File "/ssd/swinbank/docs-venv/lib/python3.6/site-packages/sphinx/io.py", line 302, in read_doc
    pub.publish()
  File "/ssd/swinbank/docs-venv/lib/python3.6/site-packages/docutils/core.py", line 217, in publish
    self.settings)
  File "/ssd/swinbank/docs-venv/lib/python3.6/site-packages/docutils/readers/__init__.py", line 72, in read
    self.parse()
  File "/ssd/swinbank/docs-venv/lib/python3.6/site-packages/docutils/readers/__init__.py", line 78, in parse
    self.parser.parse(self.input, document)
  File "/ssd/swinbank/docs-venv/lib/python3.6/site-packages/sphinx/parsers.py", line 85, in parse
    self.statemachine.run(inputstring, document, inliner=self.inliner)
  File "/ssd/swinbank/docs-venv/lib/python3.6/site-packages/docutils/parsers/rst/states.py", line 171, in run
    input_source=document['source'])
  File "/ssd/swinbank/docs-venv/lib/python3.6/site-packages/docutils/statemachine.py", line 239, in run
    context, state, transitions)
  File "/ssd/swinbank/docs-venv/lib/python3.6/site-packages/docutils/statemachine.py", line 460, in check_line
    return method(match, context, next_state)
  File "/ssd/swinbank/docs-venv/lib/python3.6/site-packages/docutils/parsers/rst/states.py", line 2988, in text
    self.section(title.lstrip(), source, style, lineno + 1, messages)
  File "/ssd/swinbank/docs-venv/lib/python3.6/site-packages/docutils/parsers/rst/states.py", line 327, in section
    self.new_subsection(title, lineno, messages)
  File "/ssd/swinbank/docs-venv/lib/python3.6/site-packages/docutils/parsers/rst/states.py", line 395, in new_subsection
    node=section_node, match_titles=True)
  File "/ssd/swinbank/docs-venv/lib/python3.6/site-packages/docutils/parsers/rst/states.py", line 282, in nested_parse
    node=node, match_titles=match_titles)
  File "/ssd/swinbank/docs-venv/lib/python3.6/site-packages/docutils/parsers/rst/states.py", line 196, in run
    results = StateMachineWS.run(self, input_lines, input_offset)
  File "/ssd/swinbank/docs-venv/lib/python3.6/site-packages/docutils/statemachine.py", line 239, in run
    context, state, transitions)
  File "/ssd/swinbank/docs-venv/lib/python3.6/site-packages/docutils/statemachine.py", line 460, in check_line
    return method(match, context, next_state)
  File "/ssd/swinbank/docs-venv/lib/python3.6/site-packages/docutils/parsers/rst/states.py", line 2753, in underline
    self.section(title, source, style, lineno - 1, messages)
  File "/ssd/swinbank/docs-venv/lib/python3.6/site-packages/docutils/parsers/rst/states.py", line 327, in section
    self.new_subsection(title, lineno, messages)
  File "/ssd/swinbank/docs-venv/lib/python3.6/site-packages/docutils/parsers/rst/states.py", line 395, in new_subsection
    node=section_node, match_titles=True)
  File "/ssd/swinbank/docs-venv/lib/python3.6/site-packages/docutils/parsers/rst/states.py", line 282, in nested_parse
    node=node, match_titles=match_titles)
  File "/ssd/swinbank/docs-venv/lib/python3.6/site-packages/docutils/parsers/rst/states.py", line 196, in run
    results = StateMachineWS.run(self, input_lines, input_offset)
  File "/ssd/swinbank/docs-venv/lib/python3.6/site-packages/docutils/statemachine.py", line 239, in run
    context, state, transitions)
  File "/ssd/swinbank/docs-venv/lib/python3.6/site-packages/docutils/statemachine.py", line 460, in check_line
    return method(match, context, next_state)
  File "/ssd/swinbank/docs-venv/lib/python3.6/site-packages/docutils/parsers/rst/states.py", line 2326, in explicit_markup
    nodelist, blank_finish = self.explicit_construct(match)
  File "/ssd/swinbank/docs-venv/lib/python3.6/site-packages/docutils/parsers/rst/states.py", line 2338, in explicit_construct
    return method(self, expmatch)
  File "/ssd/swinbank/docs-venv/lib/python3.6/site-packages/docutils/parsers/rst/states.py", line 2081, in directive
    directive_class, match, type_name, option_presets)
  File "/ssd/swinbank/docs-venv/lib/python3.6/site-packages/docutils/parsers/rst/states.py", line 2130, in run_directive
    result = directive_instance.run()
  File "/ssd/swinbank/docs-venv/lib/python3.6/site-packages/documenteer/sphinxext/lssttasks/configfieldlists.py", line 166, in run
    self.lineno)
  File "/ssd/swinbank/docs-venv/lib/python3.6/site-packages/documenteer/sphinxext/lssttasks/configfieldlists.py", line 308, in wrapped_formatter
    nodes = formatter(*args, **kwargs)
  File "/ssd/swinbank/docs-venv/lib/python3.6/site-packages/documenteer/sphinxext/lssttasks/configfieldlists.py", line 933, in format_registryfield_nodes
    name = '.'.join((choice_class.__module__, choice_class.__name__))
AttributeError: 'ConfigurableWrapper' object has no attribute '__name__'

Exception occurred:
  File "/ssd/swinbank/docs-venv/lib/python3.6/site-packages/documenteer/sphinxext/lssttasks/configfieldlists.py", line 933, in format_registryfield_nodes
    name = '.'.join((choice_class.__module__, choice_class.__name__))
AttributeError: 'ConfigurableWrapper' object has no attribute '__name__'
The full traceback has been saved in /tmp/sphinx-err-7y421t1t.log, if you want to report the issue to the developers.
Please also report this if it was a user error, so that a better error message can be provided next time.
A bug report can be filed in the tracker at <https://github.com/sphinx-doc/sphinx/issues>. Thanks!