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jeanpat / evenement_ensemble.ipynb
Created September 26, 2020 20:34
Evenement_ensemble.ipynb
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jeanpat / Kaprekar.ipynb
Created May 15, 2020 13:25
Introduction à l'usage du notebook jupyter et au langage python-Un problème: l'algorithme de Kaprekar.
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jeanpat / Download_from_github_2164-dataset.ipynb
Created January 31, 2020 12:15
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jeanpat / Clean Dataset from their spurious pixels.ipynb
Last active January 31, 2020 12:09
This jupyter notebook can be used to clean the groundtruth images from the following dataset: https://github.com/jeanpat/DeepFISH/blob/master/dataset/LowRes_13434_overlapping_pairs.h5
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jeanpat / Fluctuation-naissances.ipynb
Created November 19, 2019 07:12
Introduction à python et fluctuation d'échantillonage
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jeanpat / Test with tf_unet.ipynb
Created April 20, 2017 17:30
Try to load dataset in tf_unet
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jeanpat / C8skel_to_Graph.py
Created May 30, 2014 21:29
Cell of an ipython notebook containing a function to convert the image of a skeleton defined on a neighborhood of 8 pixels, into a graph (networkx). Depends on numpy, mahotas, networkx
import mahotas as mh
import networkx as nx
import numpy as np
def C8skeleton_to_graph(skeletonC8):
#images processing: extraction of branchedpoints, end-points, edges
ep = endPoints(skeletonC8)
bp = branchedPoints(skeletonC8, showSE = False)
## Label branched-points
l_bp,_ = mh.label(bp)
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jeanpat / LoadingDataset-Second Generation-save for SegCaps.ipynb
Created August 26, 2018 08:23
Loading a subset of images to copy them in the data directory of SegCaps
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jeanpat / Cellular.py
Last active July 15, 2018 16:50
Modules used in telomere length modelisation
# -*- coding: utf-8 -*-
"""
Created on Wed Mar 30 13:04:37 2016
@author: jeanpat
"""
import pandas as pn
from itertools import product
import ClassChromosome as K
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jeanpat / Tinkering_with_OverlapSegmentationNet-01.ipynb
Last active October 12, 2017 14:11
Exploration of a Keras model trained for 14 epochs (not enough)
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