Created
May 8, 2024 15:52
-
-
Save jfgrimm/0133cb44634bd6543835643e9b88f797 to your computer and use it in GitHub Desktop.
(partial) EasyBuild log for failed build of /tmp/eb-vh4px4um/files_pr20496/p/PSM2/PSM2-12.0.1-GCCcore-11.3.0.eb (PR(s) #20496)
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
== 2024-05-08 16:52:06,366 easyblock.py:313 INFO This is EasyBuild 4.9.1 (framework: 4.9.1, easyblocks: 4.9.1) on host node109.viking2.yor.alces.network. | |
== 2024-05-08 16:52:06,367 easyblock.py:319 INFO This is easyblock ConfigureMake from module easybuild.easyblocks.generic.configuremake (/opt/apps/eb/software/EasyBuild/4.9.1/lib/python3.6/site-packages/easybuild/easyblocks/generic/configuremake.py) | |
== 2024-05-08 16:52:06,367 easyblock.py:1056 INFO Build dir set to /dev/shm/jfg508/PSM2/12.0.1/GCCcore-11.3.0 | |
== 2024-05-08 16:52:06,367 easyblock.py:1113 INFO Software install dir set to /mnt/scratch/users/jfg508/eb/software/PSM2/12.0.1-GCCcore-11.3.0 | |
== 2024-05-08 16:52:06,367 easyblock.py:1118 INFO Module install dir set to /mnt/scratch/users/jfg508/eb/modules/all | |
== 2024-05-08 16:52:06,367 easyblock.py:288 INFO Init completed for application name PSM2 version 12.0.1 | |
== 2024-05-08 16:52:06,367 easyblock.py:4234 INFO Obtained application instance of for PSM2 (easyblock: ConfigureMake) | |
== 2024-05-08 16:52:06,367 easyconfig.py:1702 INFO Generating template values... | |
== 2024-05-08 16:52:06,368 easyconfig.py:1721 INFO Template values: arch='x86_64', bitbucket_account='psm2', cuda_cc_cmake='86;90', cuda_cc_semicolon_sep='8.6;9.0', cuda_cc_space_sep='8.6 9.0', cuda_compute_capabilities='8.6,9.0', cuda_sm_comma_sep='sm_86,sm_90', cuda_sm_space_sep='sm_86 sm_90', cudamajver='11', cudaminver='7', cudashortver='11.7', cudaver='11.7.0', github_account='psm2', module_name='PSM2/12.0.1-GCCcore-11.3.0', name='PSM2', nameletter='P', nameletterlower='p', namelower='psm2', sysroot='', toolchain_name='GCCcore', toolchain_version='11.3.0', version='12.0.1', version_major='12', version_major_minor='12.0', version_minor='0', versionprefix='', versionsuffix='' | |
== 2024-05-08 16:52:06,368 one.py:180 INFO Skipping reformatting value for parameter 'toolchain' | |
== 2024-05-08 16:52:06,368 one.py:180 INFO Skipping reformatting value for parameter 'toolchainopts' | |
== 2024-05-08 16:52:06,369 filetools.py:1912 INFO Creating directory /tmp/eb-vh4px4um/reprod_20240508165206_2532657 (parents: True, set_gid: False, sticky: False) | |
== 2024-05-08 16:52:06,369 easyblock.py:4488 INFO Dumped easyconfig instance to /tmp/eb-vh4px4um/reprod_20240508165206_2532657/PSM2-12.0.1-GCCcore-11.3.0.eb | |
== 2024-05-08 16:52:06,369 filetools.py:1912 INFO Creating directory /tmp/eb-vh4px4um/reprod_20240508165206_2532657/easyblocks (parents: True, set_gid: False, sticky: False) | |
== 2024-05-08 16:52:06,370 filetools.py:2425 INFO /opt/apps/eb/software/EasyBuild/4.9.1/lib/python3.6/site-packages/easybuild/easyblocks/generic/configuremake.py copied to /tmp/eb-vh4px4um/reprod_20240508165206_2532657/easyblocks/configuremake.py | |
== 2024-05-08 16:52:06,370 easyblock.py:4468 INFO Dumped easyblock configuremake.py required for reproduction to /tmp/eb-vh4px4um/reprod_20240508165206_2532657/easyblocks | |
== 2024-05-08 16:52:06,370 filetools.py:1912 INFO Creating directory /tmp/eb-vh4px4um/reprod_20240508165206_2532657/hooks (parents: True, set_gid: False, sticky: False) | |
== 2024-05-08 16:52:06,370 filetools.py:2425 INFO /users/jfg508/eb//uoy-easyconfigs/hooks/viking_hooks.py copied to /tmp/eb-vh4px4um/reprod_20240508165206_2532657/hooks/viking_hooks.py | |
== 2024-05-08 16:52:06,370 easyblock.py:4500 INFO Dumped hooks file /users/jfg508/eb//uoy-easyconfigs/hooks/viking_hooks.py which is (potentially) required for reproduction to /tmp/eb-vh4px4um/reprod_20240508165206_2532657/hooks/viking_hooks.py | |
== 2024-05-08 16:52:06,370 filetools.py:1764 INFO Adjusting permissions recursively for /mnt/scratch/users/jfg508/eb/software/PSM2/12.0.1-GCCcore-11.3.0 | |
== 2024-05-08 16:52:06,371 easyblock.py:2239 INFO Number of iterations to perform for central part of installation procedure: 1 | |
== 2024-05-08 16:52:06,371 build_log.py:267 INFO building and installing PSM2/12.0.1-GCCcore-11.3.0... | |
== 2024-05-08 16:52:06,371 filetools.py:2005 INFO Lock /mnt/scratch/users/jfg508/eb/software/.locks/_mnt_scratch_users_jfg508_eb_software_PSM2_12.0.1-GCCcore-11.3.0.lock does not exist | |
== 2024-05-08 16:52:06,371 filetools.py:1946 INFO Creating lock at /mnt/scratch/users/jfg508/eb/software/.locks/_mnt_scratch_users_jfg508_eb_software_PSM2_12.0.1-GCCcore-11.3.0.lock... | |
== 2024-05-08 16:52:06,372 filetools.py:1912 INFO Creating directory /mnt/scratch/users/jfg508/eb/software/.locks/_mnt_scratch_users_jfg508_eb_software_PSM2_12.0.1-GCCcore-11.3.0.lock (parents: True, set_gid: False, sticky: False) | |
== 2024-05-08 16:52:06,372 filetools.py:1955 INFO Lock created: /mnt/scratch/users/jfg508/eb/software/.locks/_mnt_scratch_users_jfg508_eb_software_PSM2_12.0.1-GCCcore-11.3.0.lock | |
== 2024-05-08 16:52:06,373 build_log.py:267 INFO fetching files... | |
== 2024-05-08 16:52:06,373 easyblock.py:3956 INFO Starting fetch step | |
== 2024-05-08 16:52:06,373 easyconfig.py:1702 INFO Generating template values... | |
== 2024-05-08 16:52:06,373 easyconfig.py:1721 INFO Template values: arch='x86_64', bitbucket_account='psm2', builddir='/dev/shm/jfg508/PSM2/12.0.1/GCCcore-11.3.0', cuda_cc_cmake='86;90', cuda_cc_semicolon_sep='8.6;9.0', cuda_cc_space_sep='8.6 9.0', cuda_compute_capabilities='8.6,9.0', cuda_sm_comma_sep='sm_86,sm_90', cuda_sm_space_sep='sm_86 sm_90', cudamajver='11', cudaminver='7', cudashortver='11.7', cudaver='11.7.0', github_account='psm2', installdir='/mnt/scratch/users/jfg508/eb/software/PSM2/12.0.1-GCCcore-11.3.0', module_name='PSM2/12.0.1-GCCcore-11.3.0', name='PSM2', nameletter='P', nameletterlower='p', namelower='psm2', start_dir='None', sysroot='', toolchain_name='GCCcore', toolchain_version='11.3.0', version='12.0.1', version_major='12', version_major_minor='12.0', version_minor='0', versionprefix='', versionsuffix='' | |
== 2024-05-08 16:52:06,373 easyblock.py:3964 INFO Running method fetch_step part of step fetch | |
== 2024-05-08 16:52:06,373 easyblock.py:2361 WARNING Easyconfig does not specify an EasyBuild-version (key 'easybuild_version')! Assuming the latest version | |
== 2024-05-08 16:52:06,373 easyblock.py:810 INFO Considering directory in which easyconfig file is located when searching for PSM2_12.0.1.tar.gz: /tmp/eb-vh4px4um/files_pr20496/p/PSM2 | |
== 2024-05-08 16:52:06,373 tools.py:274 INFO Found location to 'eb' script via $EB_SCRIPT_PATH: /opt/apps/eb/software/EasyBuild/4.9.1/bin/eb | |
== 2024-05-08 16:52:06,373 tools.py:288 INFO Also considering installation prefix /opt/apps/eb/software/EasyBuild/4.9.1 (determined via path to 'eb' script)... | |
== 2024-05-08 16:52:06,374 easyblock.py:851 INFO Found file PSM2_12.0.1.tar.gz at /opt/apps/eb/pkg/p/PSM2/PSM2_12.0.1.tar.gz | |
== 2024-05-08 16:52:06,374 easyblock.py:496 INFO Added sources: [{'name': 'PSM2_12.0.1.tar.gz', 'path': '/opt/apps/eb/pkg/p/PSM2/PSM2_12.0.1.tar.gz', 'cmd': None, 'checksum': 'e41af2d7d36a6ab67639ecbd5c1012aa20b2b464bf5cfbdac60e7eb37bfe58de', 'finalpath': '/dev/shm/jfg508/PSM2/12.0.1/GCCcore-11.3.0'}] | |
== 2024-05-08 16:52:06,374 easyblock.py:810 INFO Considering directory in which easyconfig file is located when searching for PSM2-11.2.80_hfi-user.patch: /tmp/eb-vh4px4um/files_pr20496/p/PSM2 | |
== 2024-05-08 16:52:06,374 tools.py:274 INFO Found location to 'eb' script via $EB_SCRIPT_PATH: /opt/apps/eb/software/EasyBuild/4.9.1/bin/eb | |
== 2024-05-08 16:52:06,374 tools.py:288 INFO Also considering installation prefix /opt/apps/eb/software/EasyBuild/4.9.1 (determined via path to 'eb' script)... | |
== 2024-05-08 16:52:06,374 easyblock.py:851 INFO Found file PSM2-11.2.80_hfi-user.patch at /tmp/eb-vh4px4um/files_pr20496/p/PSM2/PSM2-11.2.80_hfi-user.patch | |
== 2024-05-08 16:52:06,374 easyblock.py:535 INFO Added patches: [{'name': 'PSM2-11.2.80_hfi-user.patch', 'level': 1, 'postinstall': False, 'path': '/tmp/eb-vh4px4um/files_pr20496/p/PSM2/PSM2-11.2.80_hfi-user.patch', 'checksum': '7c97f9dc3b2a6f0e5b5d80abca87d44771f03c0895fa363229398de6df4b0884'}] | |
== 2024-05-08 16:52:06,376 easyblock.py:2414 INFO md5 checksum for /opt/apps/eb/pkg/p/PSM2/PSM2_12.0.1.tar.gz: f9c6d37a018d38fdee691fdcc84be834 | |
== 2024-05-08 16:52:06,376 easyblock.py:2414 INFO sha256 checksum for /opt/apps/eb/pkg/p/PSM2/PSM2_12.0.1.tar.gz: e41af2d7d36a6ab67639ecbd5c1012aa20b2b464bf5cfbdac60e7eb37bfe58de | |
== 2024-05-08 16:52:06,377 easyblock.py:2414 INFO md5 checksum for /tmp/eb-vh4px4um/files_pr20496/p/PSM2/PSM2-11.2.80_hfi-user.patch: aed9863630fd533d40de18166b1a1ab8 | |
== 2024-05-08 16:52:06,377 easyblock.py:2414 INFO sha256 checksum for /tmp/eb-vh4px4um/files_pr20496/p/PSM2/PSM2-11.2.80_hfi-user.patch: 7c97f9dc3b2a6f0e5b5d80abca87d44771f03c0895fa363229398de6df4b0884 | |
== 2024-05-08 16:52:06,377 easyblock.py:2449 INFO Checking dirs that need to be created: ['/mnt/scratch/users/jfg508/eb/software/PSM2/12.0.1-GCCcore-11.3.0', '/mnt/scratch/users/jfg508/eb/modules/all/PSM2', '/mnt/scratch/users/jfg508/eb/modules/lib/PSM2'] | |
== 2024-05-08 16:52:06,378 configuremake.py:96 INFO config.guess version: 2018-08-29 (last updated: 2024-04-23T14:11:34, SHA256 checksum: c02eb9cc55c86cfd1e9a794e548d25db5c9539e7b2154beb649bc6e2cbffc74c) | |
== 2024-05-08 16:52:06,378 configuremake.py:151 INFO Found config.guess at /mnt/scratch/users/jfg508/eb//pkg/generic/eb_v4.9.1/ConfigureMake/config.guess | |
== 2024-05-08 16:52:06,378 build_log.py:267 INFO ... (took < 1 sec) | |
== 2024-05-08 16:52:06,378 build_log.py:267 INFO creating build dir, resetting environment... | |
== 2024-05-08 16:52:06,378 easyblock.py:3956 INFO Starting ready step | |
== 2024-05-08 16:52:06,378 easyconfig.py:1702 INFO Generating template values... | |
== 2024-05-08 16:52:06,378 easyconfig.py:1721 INFO Template values: arch='x86_64', bitbucket_account='psm2', builddir='/dev/shm/jfg508/PSM2/12.0.1/GCCcore-11.3.0', cuda_cc_cmake='86;90', cuda_cc_semicolon_sep='8.6;9.0', cuda_cc_space_sep='8.6 9.0', cuda_compute_capabilities='8.6,9.0', cuda_sm_comma_sep='sm_86,sm_90', cuda_sm_space_sep='sm_86 sm_90', cudamajver='11', cudaminver='7', cudashortver='11.7', cudaver='11.7.0', github_account='psm2', installdir='/mnt/scratch/users/jfg508/eb/software/PSM2/12.0.1-GCCcore-11.3.0', module_name='PSM2/12.0.1-GCCcore-11.3.0', name='PSM2', nameletter='P', nameletterlower='p', namelower='psm2', start_dir='None', sysroot='', toolchain_name='GCCcore', toolchain_version='11.3.0', version='12.0.1', version_major='12', version_major_minor='12.0', version_minor='0', versionprefix='', versionsuffix='' | |
== 2024-05-08 16:52:06,379 easyblock.py:3964 INFO Running method check_readiness_step part of step ready | |
== 2024-05-08 16:52:06,379 easyblock.py:2258 INFO Setting parallelism: 16 | |
== 2024-05-08 16:52:06,418 easyblock.py:2310 WARNING Loaded modules detected: ['EasyBuild/4.9.1'] | |
== 2024-05-08 16:52:06,418 easyblock.py:3964 INFO Running method make_builddir part of step ready | |
== 2024-05-08 16:52:06,418 easyblock.py:1138 INFO Found old directory /dev/shm/jfg508/PSM2/12.0.1/GCCcore-11.3.0 | |
== 2024-05-08 16:52:06,421 filetools.py:383 INFO Path /dev/shm/jfg508/PSM2/12.0.1/GCCcore-11.3.0 successfully removed. | |
== 2024-05-08 16:52:06,421 easyblock.py:1146 INFO Removed old directory /dev/shm/jfg508/PSM2/12.0.1/GCCcore-11.3.0 | |
== 2024-05-08 16:52:06,421 filetools.py:1912 INFO Creating directory /dev/shm/jfg508/PSM2/12.0.1/GCCcore-11.3.0 (parents: True, set_gid: False, sticky: False) | |
== 2024-05-08 16:52:06,421 easyblock.py:3964 INFO Running method reset_env part of step ready | |
== 2024-05-08 16:52:06,422 easyblock.py:3964 INFO Running method handle_iterate_opts part of step ready | |
== 2024-05-08 16:52:06,422 easyconfig.py:1702 INFO Generating template values... | |
== 2024-05-08 16:52:06,422 easyconfig.py:1721 INFO Template values: arch='x86_64', bitbucket_account='psm2', builddir='/dev/shm/jfg508/PSM2/12.0.1/GCCcore-11.3.0', cuda_cc_cmake='86;90', cuda_cc_semicolon_sep='8.6;9.0', cuda_cc_space_sep='8.6 9.0', cuda_compute_capabilities='8.6,9.0', cuda_sm_comma_sep='sm_86,sm_90', cuda_sm_space_sep='sm_86 sm_90', cudamajver='11', cudaminver='7', cudashortver='11.7', cudaver='11.7.0', github_account='psm2', installdir='/mnt/scratch/users/jfg508/eb/software/PSM2/12.0.1-GCCcore-11.3.0', module_name='PSM2/12.0.1-GCCcore-11.3.0', name='PSM2', nameletter='P', nameletterlower='p', namelower='psm2', parallel='16', start_dir='None', sysroot='', toolchain_name='GCCcore', toolchain_version='11.3.0', version='12.0.1', version_major='12', version_major_minor='12.0', version_minor='0', versionprefix='', versionsuffix='' | |
== 2024-05-08 16:52:06,422 build_log.py:267 INFO ... (took < 1 sec) | |
== 2024-05-08 16:52:06,422 build_log.py:267 INFO unpacking... | |
== 2024-05-08 16:52:06,422 easyblock.py:3956 INFO Starting source step | |
== 2024-05-08 16:52:06,422 easyconfig.py:1702 INFO Generating template values... | |
== 2024-05-08 16:52:06,423 easyconfig.py:1721 INFO Template values: arch='x86_64', bitbucket_account='psm2', builddir='/dev/shm/jfg508/PSM2/12.0.1/GCCcore-11.3.0', cuda_cc_cmake='86;90', cuda_cc_semicolon_sep='8.6;9.0', cuda_cc_space_sep='8.6 9.0', cuda_compute_capabilities='8.6,9.0', cuda_sm_comma_sep='sm_86,sm_90', cuda_sm_space_sep='sm_86 sm_90', cudamajver='11', cudaminver='7', cudashortver='11.7', cudaver='11.7.0', github_account='psm2', installdir='/mnt/scratch/users/jfg508/eb/software/PSM2/12.0.1-GCCcore-11.3.0', module_name='PSM2/12.0.1-GCCcore-11.3.0', name='PSM2', nameletter='P', nameletterlower='p', namelower='psm2', parallel='16', start_dir='None', sysroot='', toolchain_name='GCCcore', toolchain_version='11.3.0', version='12.0.1', version_major='12', version_major_minor='12.0', version_minor='0', versionprefix='', versionsuffix='' | |
== 2024-05-08 16:52:06,423 easyblock.py:3964 INFO Running method checksum_step part of step source | |
== 2024-05-08 16:52:06,424 easyblock.py:2467 INFO Checksum verification for /opt/apps/eb/pkg/p/PSM2/PSM2_12.0.1.tar.gz using e41af2d7d36a6ab67639ecbd5c1012aa20b2b464bf5cfbdac60e7eb37bfe58de passed. | |
== 2024-05-08 16:52:06,424 easyblock.py:2467 INFO Checksum verification for /tmp/eb-vh4px4um/files_pr20496/p/PSM2/PSM2-11.2.80_hfi-user.patch using 7c97f9dc3b2a6f0e5b5d80abca87d44771f03c0895fa363229398de6df4b0884 passed. | |
== 2024-05-08 16:52:06,424 easyblock.py:3964 INFO Running method extract_step part of step source | |
== 2024-05-08 16:52:06,424 easyblock.py:2579 INFO Unpacking source PSM2_12.0.1.tar.gz | |
== 2024-05-08 16:52:06,424 run.py:247 INFO running cmd: tar xzf /opt/apps/eb/pkg/p/PSM2/PSM2_12.0.1.tar.gz | |
== 2024-05-08 16:52:06,447 build_log.py:267 INFO ... (took < 1 sec) | |
== 2024-05-08 16:52:06,448 build_log.py:267 INFO patching... | |
== 2024-05-08 16:52:06,448 easyblock.py:3956 INFO Starting patch step | |
== 2024-05-08 16:52:06,448 easyconfig.py:1702 INFO Generating template values... | |
== 2024-05-08 16:52:06,448 easyconfig.py:1721 INFO Template values: arch='x86_64', bitbucket_account='psm2', builddir='/dev/shm/jfg508/PSM2/12.0.1/GCCcore-11.3.0', cuda_cc_cmake='86;90', cuda_cc_semicolon_sep='8.6;9.0', cuda_cc_space_sep='8.6 9.0', cuda_compute_capabilities='8.6,9.0', cuda_sm_comma_sep='sm_86,sm_90', cuda_sm_space_sep='sm_86 sm_90', cudamajver='11', cudaminver='7', cudashortver='11.7', cudaver='11.7.0', github_account='psm2', installdir='/mnt/scratch/users/jfg508/eb/software/PSM2/12.0.1-GCCcore-11.3.0', module_name='PSM2/12.0.1-GCCcore-11.3.0', name='PSM2', nameletter='P', nameletterlower='p', namelower='psm2', parallel='16', start_dir='None', sysroot='', toolchain_name='GCCcore', toolchain_version='11.3.0', version='12.0.1', version_major='12', version_major_minor='12.0', version_minor='0', versionprefix='', versionsuffix='' | |
== 2024-05-08 16:52:06,448 easyblock.py:3964 INFO Running method patch_step part of step patch | |
== 2024-05-08 16:52:06,449 easyblock.py:2597 INFO Applying patch PSM2-11.2.80_hfi-user.patch | |
== 2024-05-08 16:52:06,449 run.py:247 INFO running cmd: patch -p1 -i /tmp/eb-vh4px4um/files_pr20496/p/PSM2/PSM2-11.2.80_hfi-user.patch | |
== 2024-05-08 16:52:06,455 build_log.py:267 INFO ... (took < 1 sec) | |
== 2024-05-08 16:52:06,455 build_log.py:267 INFO preparing... | |
== 2024-05-08 16:52:06,455 easyblock.py:3956 INFO Starting prepare step | |
== 2024-05-08 16:52:06,455 easyconfig.py:1702 INFO Generating template values... | |
== 2024-05-08 16:52:06,456 easyconfig.py:1721 INFO Template values: arch='x86_64', bitbucket_account='psm2', builddir='/dev/shm/jfg508/PSM2/12.0.1/GCCcore-11.3.0', cuda_cc_cmake='86;90', cuda_cc_semicolon_sep='8.6;9.0', cuda_cc_space_sep='8.6 9.0', cuda_compute_capabilities='8.6,9.0', cuda_sm_comma_sep='sm_86,sm_90', cuda_sm_space_sep='sm_86 sm_90', cudamajver='11', cudaminver='7', cudashortver='11.7', cudaver='11.7.0', github_account='psm2', installdir='/mnt/scratch/users/jfg508/eb/software/PSM2/12.0.1-GCCcore-11.3.0', module_name='PSM2/12.0.1-GCCcore-11.3.0', name='PSM2', nameletter='P', nameletterlower='p', namelower='psm2', parallel='16', start_dir='None', sysroot='', toolchain_name='GCCcore', toolchain_version='11.3.0', version='12.0.1', version_major='12', version_major_minor='12.0', version_minor='0', versionprefix='', versionsuffix='' | |
== 2024-05-08 16:52:06,456 easyblock.py:3964 INFO Running method prepare_step part of step prepare | |
== 2024-05-08 16:52:07,726 modules.py:626 INFO Checking whether CUDA/11.7.0 exists... | |
== 2024-05-08 16:52:07,727 modules.py:631 INFO Module CUDA/11.7.0 exists (found in list of available modules) | |
== 2024-05-08 16:52:07,727 modules.py:654 INFO Result for existence check of CUDA/11.7.0 module: True | |
== 2024-05-08 16:52:07,727 modules.py:626 INFO Checking whether numactl/2.0.14-GCCcore-11.3.0 exists... | |
== 2024-05-08 16:52:07,727 modules.py:631 INFO Module numactl/2.0.14-GCCcore-11.3.0 exists (found in list of available modules) | |
== 2024-05-08 16:52:07,727 modules.py:654 INFO Result for existence check of numactl/2.0.14-GCCcore-11.3.0 module: True | |
== 2024-05-08 16:52:07,727 modules.py:626 INFO Checking whether GCCcore/11.3.0 exists... | |
== 2024-05-08 16:52:07,727 modules.py:634 INFO Module GCCcore/11.3.0 not found in list of available modules, checking via 'module show'... | |
== 2024-05-08 16:52:08,918 modules.py:654 INFO Result for existence check of GCCcore/11.3.0 module: True | |
== 2024-05-08 16:52:11,468 environment.py:93 INFO Environment variable LD_LIBRARY_PATH set to /opt/apps/eb/software/CUDA/11.7.0/nvvm/lib64:/opt/apps/eb/software/CUDA/11.7.0/extras/CUPTI/lib64:/opt/apps/eb/software/CUDA/11.7.0/lib:/opt/apps/eb/software/GCCcore/11.3.0/lib64 (previous value: '/opt/apps/eb/software/CUDA/11.7.0/nvvm/lib64:/opt/apps/eb/software/CUDA/11.7.0/extras/CUPTI/lib64:/opt/apps/eb/software/CUDA/11.7.0/lib') | |
== 2024-05-08 16:52:12,666 environment.py:93 INFO Environment variable LD_LIBRARY_PATH set to /opt/apps/eb/software/numactl/2.0.14-GCCcore-11.3.0/lib:/opt/apps/eb/software/CUDA/11.7.0/nvvm/lib64:/opt/apps/eb/software/CUDA/11.7.0/extras/CUPTI/lib64:/opt/apps/eb/software/CUDA/11.7.0/lib:/opt/apps/eb/software/GCCcore/11.3.0/lib64 (previous value: '/opt/apps/eb/software/numactl/2.0.14-GCCcore-11.3.0/lib') | |
== 2024-05-08 16:52:12,666 modules.py:626 INFO Checking whether GCCcore/11.3.0 exists... | |
== 2024-05-08 16:52:12,666 modules.py:634 INFO Module GCCcore/11.3.0 not found in list of available modules, checking via 'module show'... | |
== 2024-05-08 16:52:12,666 modules.py:654 INFO Result for existence check of GCCcore/11.3.0 module: True | |
== 2024-05-08 16:52:12,667 toolchain.py:766 INFO List of toolchain dependency modules and toolchain definition match! | |
== 2024-05-08 16:52:12,668 compiler.py:339 INFO _set_optimal_architecture: no optarch found for compiler GCC. Ignoring option. | |
== 2024-05-08 16:52:12,668 compiler.py:363 INFO _set_optimal_architecture: using march=native as optarch for x86_64/AMD. | |
== 2024-05-08 16:52:12,671 environment.py:93 INFO Environment variable CC set to gcc (previously undefined) | |
== 2024-05-08 16:52:12,671 environment.py:93 INFO Environment variable EBVARCC set to gcc (previously undefined) | |
== 2024-05-08 16:52:12,671 environment.py:93 INFO Environment variable CFLAGS set to -O2 -ftree-vectorize -march=native -fno-math-errno -fPIC (previously undefined) | |
== 2024-05-08 16:52:12,671 environment.py:93 INFO Environment variable EBVARCFLAGS set to -O2 -ftree-vectorize -march=native -fno-math-errno -fPIC (previously undefined) | |
== 2024-05-08 16:52:12,671 environment.py:93 INFO Environment variable CPPFLAGS set to -I/opt/apps/eb/software/numactl/2.0.14-GCCcore-11.3.0/include -I/opt/apps/eb/software/CUDA/11.7.0/include (previously undefined) | |
== 2024-05-08 16:52:12,671 environment.py:93 INFO Environment variable EBVARCPPFLAGS set to -I/opt/apps/eb/software/numactl/2.0.14-GCCcore-11.3.0/include -I/opt/apps/eb/software/CUDA/11.7.0/include (previously undefined) | |
== 2024-05-08 16:52:12,671 environment.py:93 INFO Environment variable CXX set to g++ (previously undefined) | |
== 2024-05-08 16:52:12,672 environment.py:93 INFO Environment variable EBVARCXX set to g++ (previously undefined) | |
== 2024-05-08 16:52:12,672 environment.py:93 INFO Environment variable CXXFLAGS set to -O2 -ftree-vectorize -march=native -fno-math-errno -fPIC (previously undefined) | |
== 2024-05-08 16:52:12,672 environment.py:93 INFO Environment variable EBVARCXXFLAGS set to -O2 -ftree-vectorize -march=native -fno-math-errno -fPIC (previously undefined) | |
== 2024-05-08 16:52:12,672 environment.py:93 INFO Environment variable F77 set to gfortran (previously undefined) | |
== 2024-05-08 16:52:12,672 environment.py:93 INFO Environment variable EBVARF77 set to gfortran (previously undefined) | |
== 2024-05-08 16:52:12,672 environment.py:93 INFO Environment variable F90 set to gfortran (previously undefined) | |
== 2024-05-08 16:52:12,672 environment.py:93 INFO Environment variable EBVARF90 set to gfortran (previously undefined) | |
== 2024-05-08 16:52:12,672 environment.py:93 INFO Environment variable F90FLAGS set to -O2 -ftree-vectorize -march=native -fno-math-errno -fPIC (previously undefined) | |
== 2024-05-08 16:52:12,672 environment.py:93 INFO Environment variable EBVARF90FLAGS set to -O2 -ftree-vectorize -march=native -fno-math-errno -fPIC (previously undefined) | |
== 2024-05-08 16:52:12,672 environment.py:93 INFO Environment variable FC set to gfortran (previously undefined) | |
== 2024-05-08 16:52:12,672 environment.py:93 INFO Environment variable EBVARFC set to gfortran (previously undefined) | |
== 2024-05-08 16:52:12,672 environment.py:93 INFO Environment variable FCFLAGS set to -O2 -ftree-vectorize -march=native -fno-math-errno -fPIC (previously undefined) | |
== 2024-05-08 16:52:12,672 environment.py:93 INFO Environment variable EBVARFCFLAGS set to -O2 -ftree-vectorize -march=native -fno-math-errno -fPIC (previously undefined) | |
== 2024-05-08 16:52:12,673 environment.py:93 INFO Environment variable FFLAGS set to -O2 -ftree-vectorize -march=native -fno-math-errno -fPIC (previously undefined) | |
== 2024-05-08 16:52:12,673 environment.py:93 INFO Environment variable EBVARFFLAGS set to -O2 -ftree-vectorize -march=native -fno-math-errno -fPIC (previously undefined) | |
== 2024-05-08 16:52:12,673 environment.py:93 INFO Environment variable FLIBS set to -lgfortran (previously undefined) | |
== 2024-05-08 16:52:12,673 environment.py:93 INFO Environment variable EBVARFLIBS set to -lgfortran (previously undefined) | |
== 2024-05-08 16:52:12,673 environment.py:93 INFO Environment variable LDFLAGS set to -L/opt/apps/eb/software/numactl/2.0.14-GCCcore-11.3.0/lib64 -L/opt/apps/eb/software/numactl/2.0.14-GCCcore-11.3.0/lib -L/opt/apps/eb/software/CUDA/11.7.0/lib64 -L/opt/apps/eb/software/CUDA/11.7.0/lib -L/opt/apps/eb/software/GCCcore/11.3.0/lib64 -L/opt/apps/eb/software/GCCcore/11.3.0/lib (previously undefined) | |
== 2024-05-08 16:52:12,673 environment.py:93 INFO Environment variable EBVARLDFLAGS set to -L/opt/apps/eb/software/numactl/2.0.14-GCCcore-11.3.0/lib64 -L/opt/apps/eb/software/numactl/2.0.14-GCCcore-11.3.0/lib -L/opt/apps/eb/software/CUDA/11.7.0/lib64 -L/opt/apps/eb/software/CUDA/11.7.0/lib -L/opt/apps/eb/software/GCCcore/11.3.0/lib64 -L/opt/apps/eb/software/GCCcore/11.3.0/lib (previously undefined) | |
== 2024-05-08 16:52:12,673 environment.py:93 INFO Environment variable LIBS set to -lm -lpthread (previously undefined) | |
== 2024-05-08 16:52:12,673 environment.py:93 INFO Environment variable EBVARLIBS set to -lm -lpthread (previously undefined) | |
== 2024-05-08 16:52:12,673 environment.py:93 INFO Environment variable OPTFLAGS set to -O2 -ftree-vectorize -march=native (previously undefined) | |
== 2024-05-08 16:52:12,673 environment.py:93 INFO Environment variable EBVAROPTFLAGS set to -O2 -ftree-vectorize -march=native (previously undefined) | |
== 2024-05-08 16:52:12,673 environment.py:93 INFO Environment variable PRECFLAGS set to -fno-math-errno (previously undefined) | |
== 2024-05-08 16:52:12,673 environment.py:93 INFO Environment variable EBVARPRECFLAGS set to -fno-math-errno (previously undefined) | |
== 2024-05-08 16:52:12,673 toolchain.py:961 INFO Putting RPATH wrappers in place... | |
== 2024-05-08 16:52:12,674 filetools.py:526 INFO Command gcc found at /opt/apps/eb/software/GCCcore/11.3.0/bin/gcc | |
== 2024-05-08 16:52:12,674 filetools.py:1912 INFO Creating directory /tmp/eb-vh4px4um/tmp7cvsodfx/rpath_wrappers/gcc_wrapper (parents: True, set_gid: False, sticky: False) | |
== 2024-05-08 16:52:12,675 filetools.py:1764 INFO Adjusting permissions recursively for /tmp/eb-vh4px4um/tmp7cvsodfx/rpath_wrappers/gcc_wrapper/gcc | |
== 2024-05-08 16:52:12,675 environment.py:93 INFO Environment variable PATH set to /tmp/eb-vh4px4um/tmp7cvsodfx/rpath_wrappers/gcc_wrapper:/opt/apps/eb/software/numactl/2.0.14-GCCcore-11.3.0/bin:/opt/apps/eb/software/CUDA/11.7.0/nvvm/bin:/opt/apps/eb/software/CUDA/11.7.0/bin:/opt/apps/eb/software/GCCcore/11.3.0/bin:/opt/apps/eb/software/EasyBuild/4.9.1/bin:/users/jfg508/.local/bin:/users/jfg508/bin:/usr/local/bin:/usr/bin:/usr/local/sbin:/usr/sbin (previous value: '/opt/apps/eb/software/numactl/2.0.14-GCCcore-11.3.0/bin:/opt/apps/eb/software/CUDA/11.7.0/nvvm/bin:/opt/apps/eb/software/CUDA/11.7.0/bin:/opt/apps/eb/software/GCCcore/11.3.0/bin:/opt/apps/eb/software/EasyBuild/4.9.1/bin:/users/jfg508/.local/bin:/users/jfg508/bin:/usr/local/bin:/usr/bin:/usr/local/sbin:/usr/sbin') | |
== 2024-05-08 16:52:12,675 filetools.py:526 INFO Command gcc found at /tmp/eb-vh4px4um/tmp7cvsodfx/rpath_wrappers/gcc_wrapper/gcc | |
== 2024-05-08 16:52:12,675 toolchain.py:1045 INFO RPATH wrapper script for /opt/apps/eb/software/GCCcore/11.3.0/bin/gcc: /tmp/eb-vh4px4um/tmp7cvsodfx/rpath_wrappers/gcc_wrapper/gcc (log: /dev/null) | |
== 2024-05-08 16:52:12,675 filetools.py:526 INFO Command g++ found at /opt/apps/eb/software/GCCcore/11.3.0/bin/g++ | |
== 2024-05-08 16:52:12,675 filetools.py:1912 INFO Creating directory /tmp/eb-vh4px4um/tmp7cvsodfx/rpath_wrappers/gxx_wrapper (parents: True, set_gid: False, sticky: False) | |
== 2024-05-08 16:52:12,676 filetools.py:1764 INFO Adjusting permissions recursively for /tmp/eb-vh4px4um/tmp7cvsodfx/rpath_wrappers/gxx_wrapper/g++ | |
== 2024-05-08 16:52:12,676 environment.py:93 INFO Environment variable PATH set to /tmp/eb-vh4px4um/tmp7cvsodfx/rpath_wrappers/gxx_wrapper:/tmp/eb-vh4px4um/tmp7cvsodfx/rpath_wrappers/gcc_wrapper:/opt/apps/eb/software/numactl/2.0.14-GCCcore-11.3.0/bin:/opt/apps/eb/software/CUDA/11.7.0/nvvm/bin:/opt/apps/eb/software/CUDA/11.7.0/bin:/opt/apps/eb/software/GCCcore/11.3.0/bin:/opt/apps/eb/software/EasyBuild/4.9.1/bin:/users/jfg508/.local/bin:/users/jfg508/bin:/usr/local/bin:/usr/bin:/usr/local/sbin:/usr/sbin (previous value: '/tmp/eb-vh4px4um/tmp7cvsodfx/rpath_wrappers/gcc_wrapper:/opt/apps/eb/software/numactl/2.0.14-GCCcore-11.3.0/bin:/opt/apps/eb/software/CUDA/11.7.0/nvvm/bin:/opt/apps/eb/software/CUDA/11.7.0/bin:/opt/apps/eb/software/GCCcore/11.3.0/bin:/opt/apps/eb/software/EasyBuild/4.9.1/bin:/users/jfg508/.local/bin:/users/jfg508/bin:/usr/local/bin:/usr/bin:/usr/local/sbin:/usr/sbin') | |
== 2024-05-08 16:52:12,676 filetools.py:526 INFO Command g++ found at /tmp/eb-vh4px4um/tmp7cvsodfx/rpath_wrappers/gxx_wrapper/g++ | |
== 2024-05-08 16:52:12,676 toolchain.py:1045 INFO RPATH wrapper script for /opt/apps/eb/software/GCCcore/11.3.0/bin/g++: /tmp/eb-vh4px4um/tmp7cvsodfx/rpath_wrappers/gxx_wrapper/g++ (log: /dev/null) | |
== 2024-05-08 16:52:12,676 filetools.py:526 INFO Command gfortran found at /opt/apps/eb/software/GCCcore/11.3.0/bin/gfortran | |
== 2024-05-08 16:52:12,676 filetools.py:1912 INFO Creating directory /tmp/eb-vh4px4um/tmp7cvsodfx/rpath_wrappers/gfortran_wrapper (parents: True, set_gid: False, sticky: False) | |
== 2024-05-08 16:52:12,677 filetools.py:1764 INFO Adjusting permissions recursively for /tmp/eb-vh4px4um/tmp7cvsodfx/rpath_wrappers/gfortran_wrapper/gfortran | |
== 2024-05-08 16:52:12,677 environment.py:93 INFO Environment variable PATH set to /tmp/eb-vh4px4um/tmp7cvsodfx/rpath_wrappers/gfortran_wrapper:/tmp/eb-vh4px4um/tmp7cvsodfx/rpath_wrappers/gxx_wrapper:/tmp/eb-vh4px4um/tmp7cvsodfx/rpath_wrappers/gcc_wrapper:/opt/apps/eb/software/numactl/2.0.14-GCCcore-11.3.0/bin:/opt/apps/eb/software/CUDA/11.7.0/nvvm/bin:/opt/apps/eb/software/CUDA/11.7.0/bin:/opt/apps/eb/software/GCCcore/11.3.0/bin:/opt/apps/eb/software/EasyBuild/4.9.1/bin:/users/jfg508/.local/bin:/users/jfg508/bin:/usr/local/bin:/usr/bin:/usr/local/sbin:/usr/sbin (previous value: '/tmp/eb-vh4px4um/tmp7cvsodfx/rpath_wrappers/gxx_wrapper:/tmp/eb-vh4px4um/tmp7cvsodfx/rpath_wrappers/gcc_wrapper:/opt/apps/eb/software/numactl/2.0.14-GCCcore-11.3.0/bin:/opt/apps/eb/software/CUDA/11.7.0/nvvm/bin:/opt/apps/eb/software/CUDA/11.7.0/bin:/opt/apps/eb/software/GCCcore/11.3.0/bin:/opt/apps/eb/software/EasyBuild/4.9.1/bin:/users/jfg508/.local/bin:/users/jfg508/bin:/usr/local/bin:/usr/bin:/usr/local/sbin:/usr/sbin') | |
== 2024-05-08 16:52:12,677 filetools.py:526 INFO Command gfortran found at /tmp/eb-vh4px4um/tmp7cvsodfx/rpath_wrappers/gfortran_wrapper/gfortran | |
== 2024-05-08 16:52:12,677 toolchain.py:1045 INFO RPATH wrapper script for /opt/apps/eb/software/GCCcore/11.3.0/bin/gfortran: /tmp/eb-vh4px4um/tmp7cvsodfx/rpath_wrappers/gfortran_wrapper/gfortran (log: /dev/null) | |
== 2024-05-08 16:52:12,677 filetools.py:526 INFO Command ld found at /usr/bin/ld | |
== 2024-05-08 16:52:12,677 filetools.py:1912 INFO Creating directory /tmp/eb-vh4px4um/tmp7cvsodfx/rpath_wrappers/ld_wrapper (parents: True, set_gid: False, sticky: False) | |
== 2024-05-08 16:52:12,678 filetools.py:1764 INFO Adjusting permissions recursively for /tmp/eb-vh4px4um/tmp7cvsodfx/rpath_wrappers/ld_wrapper/ld | |
== 2024-05-08 16:52:12,678 environment.py:93 INFO Environment variable PATH set to /tmp/eb-vh4px4um/tmp7cvsodfx/rpath_wrappers/ld_wrapper:/tmp/eb-vh4px4um/tmp7cvsodfx/rpath_wrappers/gfortran_wrapper:/tmp/eb-vh4px4um/tmp7cvsodfx/rpath_wrappers/gxx_wrapper:/tmp/eb-vh4px4um/tmp7cvsodfx/rpath_wrappers/gcc_wrapper:/opt/apps/eb/software/numactl/2.0.14-GCCcore-11.3.0/bin:/opt/apps/eb/software/CUDA/11.7.0/nvvm/bin:/opt/apps/eb/software/CUDA/11.7.0/bin:/opt/apps/eb/software/GCCcore/11.3.0/bin:/opt/apps/eb/software/EasyBuild/4.9.1/bin:/users/jfg508/.local/bin:/users/jfg508/bin:/usr/local/bin:/usr/bin:/usr/local/sbin:/usr/sbin (previous value: '/tmp/eb-vh4px4um/tmp7cvsodfx/rpath_wrappers/gfortran_wrapper:/tmp/eb-vh4px4um/tmp7cvsodfx/rpath_wrappers/gxx_wrapper:/tmp/eb-vh4px4um/tmp7cvsodfx/rpath_wrappers/gcc_wrapper:/opt/apps/eb/software/numactl/2.0.14-GCCcore-11.3.0/bin:/opt/apps/eb/software/CUDA/11.7.0/nvvm/bin:/opt/apps/eb/software/CUDA/11.7.0/bin:/opt/apps/eb/software/GCCcore/11.3.0/bin:/opt/apps/eb/software/EasyBuild/4.9.1/bin:/users/jfg508/.local/bin:/users/jfg508/bin:/usr/local/bin:/usr/bin:/usr/local/sbin:/usr/sbin') | |
== 2024-05-08 16:52:12,678 filetools.py:526 INFO Command ld found at /tmp/eb-vh4px4um/tmp7cvsodfx/rpath_wrappers/ld_wrapper/ld | |
== 2024-05-08 16:52:12,678 toolchain.py:1045 INFO RPATH wrapper script for /usr/bin/ld: /tmp/eb-vh4px4um/tmp7cvsodfx/rpath_wrappers/ld_wrapper/ld (log: /dev/null) | |
== 2024-05-08 16:52:12,678 filetools.py:526 INFO Command ld.gold found at /usr/bin/ld.gold | |
== 2024-05-08 16:52:12,678 filetools.py:1912 INFO Creating directory /tmp/eb-vh4px4um/tmp7cvsodfx/rpath_wrappers/ld.gold_wrapper (parents: True, set_gid: False, sticky: False) | |
== 2024-05-08 16:52:12,679 filetools.py:1764 INFO Adjusting permissions recursively for /tmp/eb-vh4px4um/tmp7cvsodfx/rpath_wrappers/ld.gold_wrapper/ld.gold | |
== 2024-05-08 16:52:12,679 environment.py:93 INFO Environment variable PATH set to /tmp/eb-vh4px4um/tmp7cvsodfx/rpath_wrappers/ld.gold_wrapper:/tmp/eb-vh4px4um/tmp7cvsodfx/rpath_wrappers/ld_wrapper:/tmp/eb-vh4px4um/tmp7cvsodfx/rpath_wrappers/gfortran_wrapper:/tmp/eb-vh4px4um/tmp7cvsodfx/rpath_wrappers/gxx_wrapper:/tmp/eb-vh4px4um/tmp7cvsodfx/rpath_wrappers/gcc_wrapper:/opt/apps/eb/software/numactl/2.0.14-GCCcore-11.3.0/bin:/opt/apps/eb/software/CUDA/11.7.0/nvvm/bin:/opt/apps/eb/software/CUDA/11.7.0/bin:/opt/apps/eb/software/GCCcore/11.3.0/bin:/opt/apps/eb/software/EasyBuild/4.9.1/bin:/users/jfg508/.local/bin:/users/jfg508/bin:/usr/local/bin:/usr/bin:/usr/local/sbin:/usr/sbin (previous value: '/tmp/eb-vh4px4um/tmp7cvsodfx/rpath_wrappers/ld_wrapper:/tmp/eb-vh4px4um/tmp7cvsodfx/rpath_wrappers/gfortran_wrapper:/tmp/eb-vh4px4um/tmp7cvsodfx/rpath_wrappers/gxx_wrapper:/tmp/eb-vh4px4um/tmp7cvsodfx/rpath_wrappers/gcc_wrapper:/opt/apps/eb/software/numactl/2.0.14-GCCcore-11.3.0/bin:/opt/apps/eb/software/CUDA/11.7.0/nvvm/bin:/opt/apps/eb/software/CUDA/11.7.0/bin:/opt/apps/eb/software/GCCcore/11.3.0/bin:/opt/apps/eb/software/EasyBuild/4.9.1/bin:/users/jfg508/.local/bin:/users/jfg508/bin:/usr/local/bin:/usr/bin:/usr/local/sbin:/usr/sbin') | |
== 2024-05-08 16:52:12,679 filetools.py:526 INFO Command ld.gold found at /tmp/eb-vh4px4um/tmp7cvsodfx/rpath_wrappers/ld.gold_wrapper/ld.gold | |
== 2024-05-08 16:52:12,679 toolchain.py:1045 INFO RPATH wrapper script for /usr/bin/ld.gold: /tmp/eb-vh4px4um/tmp7cvsodfx/rpath_wrappers/ld.gold_wrapper/ld.gold (log: /dev/null) | |
== 2024-05-08 16:52:12,679 filetools.py:526 INFO Command ld.bfd found at /usr/bin/ld.bfd | |
== 2024-05-08 16:52:12,679 filetools.py:1912 INFO Creating directory /tmp/eb-vh4px4um/tmp7cvsodfx/rpath_wrappers/ld.bfd_wrapper (parents: True, set_gid: False, sticky: False) | |
== 2024-05-08 16:52:12,679 filetools.py:1764 INFO Adjusting permissions recursively for /tmp/eb-vh4px4um/tmp7cvsodfx/rpath_wrappers/ld.bfd_wrapper/ld.bfd | |
== 2024-05-08 16:52:12,680 environment.py:93 INFO Environment variable PATH set to /tmp/eb-vh4px4um/tmp7cvsodfx/rpath_wrappers/ld.bfd_wrapper:/tmp/eb-vh4px4um/tmp7cvsodfx/rpath_wrappers/ld.gold_wrapper:/tmp/eb-vh4px4um/tmp7cvsodfx/rpath_wrappers/ld_wrapper:/tmp/eb-vh4px4um/tmp7cvsodfx/rpath_wrappers/gfortran_wrapper:/tmp/eb-vh4px4um/tmp7cvsodfx/rpath_wrappers/gxx_wrapper:/tmp/eb-vh4px4um/tmp7cvsodfx/rpath_wrappers/gcc_wrapper:/opt/apps/eb/software/numactl/2.0.14-GCCcore-11.3.0/bin:/opt/apps/eb/software/CUDA/11.7.0/nvvm/bin:/opt/apps/eb/software/CUDA/11.7.0/bin:/opt/apps/eb/software/GCCcore/11.3.0/bin:/opt/apps/eb/software/EasyBuild/4.9.1/bin:/users/jfg508/.local/bin:/users/jfg508/bin:/usr/local/bin:/usr/bin:/usr/local/sbin:/usr/sbin (previous value: '/tmp/eb-vh4px4um/tmp7cvsodfx/rpath_wrappers/ld.gold_wrapper:/tmp/eb-vh4px4um/tmp7cvsodfx/rpath_wrappers/ld_wrapper:/tmp/eb-vh4px4um/tmp7cvsodfx/rpath_wrappers/gfortran_wrapper:/tmp/eb-vh4px4um/tmp7cvsodfx/rpath_wrappers/gxx_wrapper:/tmp/eb-vh4px4um/tmp7cvsodfx/rpath_wrappers/gcc_wrapper:/opt/apps/eb/software/numactl/2.0.14-GCCcore-11.3.0/bin:/opt/apps/eb/software/CUDA/11.7.0/nvvm/bin:/opt/apps/eb/software/CUDA/11.7.0/bin:/opt/apps/eb/software/GCCcore/11.3.0/bin:/opt/apps/eb/software/EasyBuild/4.9.1/bin:/users/jfg508/.local/bin:/users/jfg508/bin:/usr/local/bin:/usr/bin:/usr/local/sbin:/usr/sbin') | |
== 2024-05-08 16:52:12,680 filetools.py:526 INFO Command ld.bfd found at /tmp/eb-vh4px4um/tmp7cvsodfx/rpath_wrappers/ld.bfd_wrapper/ld.bfd | |
== 2024-05-08 16:52:12,680 toolchain.py:1045 INFO RPATH wrapper script for /usr/bin/ld.bfd: /tmp/eb-vh4px4um/tmp7cvsodfx/rpath_wrappers/ld.bfd_wrapper/ld.bfd (log: /dev/null) | |
== 2024-05-08 16:52:12,680 easyblock.py:1181 INFO Enabling CUDA PTX cache of size 1024 MiB at /dev/shm/jfg508/PSM2/12.0.1/GCCcore-11.3.0/eb-cuda-cache | |
== 2024-05-08 16:52:12,680 environment.py:93 INFO Environment variable CUDA_CACHE_DISABLE set to 0 (previously undefined) | |
== 2024-05-08 16:52:12,680 environment.py:93 INFO Environment variable CUDA_CACHE_PATH set to /dev/shm/jfg508/PSM2/12.0.1/GCCcore-11.3.0/eb-cuda-cache (previously undefined) | |
== 2024-05-08 16:52:12,680 environment.py:93 INFO Environment variable CUDA_CACHE_MAXSIZE set to 1073741824 (previously undefined) | |
== 2024-05-08 16:52:12,680 easyblock.py:2142 INFO Using /dev/shm/jfg508/PSM2/12.0.1/GCCcore-11.3.0/opa-psm2-PSM2_12.0.1/ as start dir | |
== 2024-05-08 16:52:12,680 build_log.py:267 INFO ... (took 6 secs) | |
== 2024-05-08 16:52:12,681 easyblock.py:3917 INFO Skipping configure step (skip: None, skipsteps: ['configure']) | |
== 2024-05-08 16:52:12,681 build_log.py:267 INFO configuring [skipped] | |
== 2024-05-08 16:52:12,681 build_log.py:267 INFO building... | |
== 2024-05-08 16:52:12,681 easyblock.py:3956 INFO Starting build step | |
== 2024-05-08 16:52:12,681 easyconfig.py:1702 INFO Generating template values... | |
== 2024-05-08 16:52:12,681 easyconfig.py:1721 INFO Template values: arch='x86_64', bitbucket_account='psm2', builddir='/dev/shm/jfg508/PSM2/12.0.1/GCCcore-11.3.0', cuda_cc_cmake='86;90', cuda_cc_semicolon_sep='8.6;9.0', cuda_cc_space_sep='8.6 9.0', cuda_compute_capabilities='8.6,9.0', cuda_sm_comma_sep='sm_86,sm_90', cuda_sm_space_sep='sm_86 sm_90', cudamajver='11', cudaminver='7', cudashortver='11.7', cudaver='11.7.0', github_account='psm2', installdir='/mnt/scratch/users/jfg508/eb/software/PSM2/12.0.1-GCCcore-11.3.0', module_name='PSM2/12.0.1-GCCcore-11.3.0', name='PSM2', nameletter='P', nameletterlower='p', namelower='psm2', parallel='16', start_dir='/dev/shm/jfg508/PSM2/12.0.1/GCCcore-11.3.0/opa-psm2-PSM2_12.0.1/', sysroot='', toolchain_name='GCCcore', toolchain_version='11.3.0', version='12.0.1', version_major='12', version_major_minor='12.0', version_minor='0', versionprefix='', versionsuffix='' | |
== 2024-05-08 16:52:12,681 easyblock.py:3964 INFO Running method build_step part of step build | |
== 2024-05-08 16:52:12,681 configuremake.py:352 INFO Building target '' | |
== 2024-05-08 16:52:12,682 run.py:247 INFO running cmd: sed -i 's|fprintf(stderr,|_HFI_DBG(|' psm_context.c && sed -i 's|/usr|/|' Makefile && make -j 16 arch=x86_64 USE_PSM_UUID=1 PSM_CUDA=1 WERROR= | |
== 2024-05-08 16:52:13,231 build_log.py:171 ERROR EasyBuild crashed with an error (at easybuild/base/exceptions.py:126 in __init__): cmd "sed -i 's|fprintf(stderr,|_HFI_DBG(|' psm_context.c && sed -i 's|/usr|/|' Makefile && make -j 16 arch=x86_64 USE_PSM_UUID=1 PSM_CUDA=1 WERROR=" exited with exit code 2 and output: | |
mkdir -p /dev/shm/jfg508/PSM2/12.0.1/GCCcore-11.3.0/opa-psm2-PSM2_12.0.1/build_release | |
# Our buildflags.mak exports all variables, all are propogated to submakes. | |
make[1]: warning: -j32 forced in submake: resetting jobserver mode. | |
make[1]: Entering directory '/dev/shm/jfg508/PSM2/12.0.1/GCCcore-11.3.0/opa-psm2-PSM2_12.0.1/ptl_self' | |
gcc -O2 -ftree-vectorize -march=native -fno-math-errno -fPIC -pthread -Wall -mavx2 -D_DEFAULT_SOURCE -D_SVID_SOURCE -D_BSD_SOURCE -O3 -g3 -DNVIDIA_GPU_DIRECT -DPSM_CUDA -fpic -fPIC -D_GNU_SOURCE -funwind-tables -Wno-strict-aliasing -Wformat-security -I/dev/shm/jfg508/PSM2/12.0.1/GCCcore-11.3.0/opa-psm2-PSM2_12.0.1/include -I/dev/shm/jfg508/PSM2/12.0.1/GCCcore-11.3.0/opa-psm2-PSM2_12.0.1/mpspawn -I/dev/shm/jfg508/PSM2/12.0.1/GCCcore-11.3.0/opa-psm2-PSM2_12.0.1/include/linux-x86_64 -I/usr/include/uapi -I/opt/apps/eb/software/CUDA/11.7.0/include -I/dev/shm/jfg508/PSM2/12.0.1/GCCcore-11.3.0/opa-psm2-PSM2_12.0.1 -I/dev/shm/jfg508/PSM2/12.0.1/GCCcore-11.3.0/opa-psm2-PSM2_12.0.1/ptl_ips -I/dev/shm/jfg508/PSM2/12.0.1/GCCcore-11.3.0/opa-psm2-PSM2_12.0.1/build_release -I/dev/shm/jfg508/PSM2/12.0.1/GCCcore-11.3.0/opa-psm2-PSM2_12.0.1/ptl_self/.. /dev/shm/jfg508/PSM2/12.0.1/GCCcore-11.3.0/opa-psm2-PSM2_12.0.1/ptl_self/ptl.c -MM -MF /dev/shm/jfg508/PSM2/12.0.1/GCCcore-11.3.0/opa-psm2-PSM2_12.0.1/build_release/ptl_self/ptl.d -MQ /dev/shm/jfg508/PSM2/12.0.1/GCCcore-11.3.0/opa-psm2-PSM2_12.0.1/build_release/ptl_self/ptl.o | |
gcc -O2 -ftree-vectorize -march=native -fno-math-errno -fPIC -pthread -Wall -mavx2 -D_DEFAULT_SOURCE -D_SVID_SOURCE -D_BSD_SOURCE -O3 -g3 -DNVIDIA_GPU_DIRECT -DPSM_CUDA -fpic -fPIC -D_GNU_SOURCE -funwind-tables -Wno-strict-aliasing -Wformat-security -I/dev/shm/jfg508/PSM2/12.0.1/GCCcore-11.3.0/opa-psm2-PSM2_12.0.1/include -I/dev/shm/jfg508/PSM2/12.0.1/GCCcore-11.3.0/opa-psm2-PSM2_12.0.1/mpspawn -I/dev/shm/jfg508/PSM2/12.0.1/GCCcore-11.3.0/opa-psm2-PSM2_12.0.1/include/linux-x86_64 -I/usr/include/uapi -I/opt/apps/eb/software/CUDA/11.7.0/include -I/dev/shm/jfg508/PSM2/12.0.1/GCCcore-11.3.0/opa-psm2-PSM2_12.0.1 -I/dev/shm/jfg508/PSM2/12.0.1/GCCcore-11.3.0/opa-psm2-PSM2_12.0.1/ptl_ips -I/dev/shm/jfg508/PSM2/12.0.1/GCCcore-11.3.0/opa-psm2-PSM2_12.0.1/build_release -I/dev/shm/jfg508/PSM2/12.0.1/GCCcore-11.3.0/opa-psm2-PSM2_12.0.1/ptl_self/.. -c /dev/shm/jfg508/PSM2/12.0.1/GCCcore-11.3.0/opa-psm2-PSM2_12.0.1/ptl_self/ptl.c -o /dev/shm/jfg508/PSM2/12.0.1/GCCcore-11.3.0/opa-psm2-PSM2_12.0.1/build_release/ptl_self/ptl.o | |
as: unrecognized option '--gdwarf-5' | |
make[1]: *** [Makefile:73: /dev/shm/jfg508/PSM2/12.0.1/GCCcore-11.3.0/opa-psm2-PSM2_12.0.1/build_release/ptl_self/ptl.o] Error 1 | |
make[1]: Leaving directory '/dev/shm/jfg508/PSM2/12.0.1/GCCcore-11.3.0/opa-psm2-PSM2_12.0.1/ptl_self' | |
make: *** [Makefile:301: all] Error 1 | |
(at easybuild/tools/run.py:682 in parse_cmd_output) | |
== 2024-05-08 16:52:13,232 build_log.py:267 INFO ... (took < 1 sec) | |
== 2024-05-08 16:52:13,233 filetools.py:2013 INFO Removing lock /mnt/scratch/users/jfg508/eb/software/.locks/_mnt_scratch_users_jfg508_eb_software_PSM2_12.0.1-GCCcore-11.3.0.lock... | |
== 2024-05-08 16:52:13,234 filetools.py:383 INFO Path /mnt/scratch/users/jfg508/eb/software/.locks/_mnt_scratch_users_jfg508_eb_software_PSM2_12.0.1-GCCcore-11.3.0.lock successfully removed. | |
== 2024-05-08 16:52:13,234 filetools.py:2017 INFO Lock removed: /mnt/scratch/users/jfg508/eb/software/.locks/_mnt_scratch_users_jfg508_eb_software_PSM2_12.0.1-GCCcore-11.3.0.lock | |
== 2024-05-08 16:52:13,234 easyblock.py:4291 WARNING build failed (first 300 chars): cmd "sed -i 's|fprintf(stderr,|_HFI_DBG(|' psm_context.c && sed -i 's|/usr|/|' Makefile && make -j 16 arch=x86_64 USE_PSM_UUID=1 PSM_CUDA=1 WERROR=" exited with exit code 2 and output: | |
mkdir -p /dev/shm/jfg508/PSM2/12.0.1/GCCcore-11.3.0/opa-psm2-PSM2_12.0.1/build_release | |
# Our buildflags.mak expor | |
== 2024-05-08 16:52:13,235 easyblock.py:328 INFO Closing log for application name PSM2 version 12.0.1 |
Sign up for free
to join this conversation on GitHub.
Already have an account?
Sign in to comment