List containing a SMILE string for a closed shell molecules for each element + program that converts the list to a set of sdf files

elements.smiles

Hydrogen	HCl
Helium	He
Lithium	LiCl
Beryllium	Be
Boron	B
Carbon	C
Nitrogen	N
Oxygen	O
Fluorine	F
Neon	Ne
Sodium	NaCl
Magnesium	Mg
Aluminum	Al
Silicon	Si
Phosphorus	P
Sulfur	S
Chlorine	Cl
Argon	Ar
Potassium	KCl
Calcium	ClCaCl
Scandium	Cl[Sc](Cl)Cl
Titanium	Cl[Ti](Cl)(Cl)Cl
Zinc	ClZnCl
Gallium	Ga
Germanium	Ge
Arsenic	As
Selenium	Se
Bromine	Br
Krypton	Kr
Rubidium	[Rb]Cl
Strontium	Cl[Sr]Cl
Yttrium	Cl[Y](Cl)Cl
Zirconium	Cl[Zr](Cl)(Cl)Cl
Palladium	Pd
Cadmium	Cl[Cd]Cl
Indium	[In]
Tin	[Sn]
Antimony	[Sb]
Tellurium	[Te]
Iodine	I
Xenon	Xe
Cesium	[Cs]Cl
Barium	Cl[Ba]Cl
Lanthanum	 Cl[La](Cl)Cl
Hafnium	Cl[Hf](Cl)(Cl)Cl
Mercury	Cl[Hg]
Thallium	Tl
Lead	[Pb]
Bismuth	[Bi]
Polonium	[Po]
Astatine	[At]
Radon	[Rn]

smiles2coord.py

import subprocess,sys

filename = sys.argv[1]
file = open(filename, "r+")

for line in file:
    words = line.split()
    name = words[0]
    smiles = words[1]
    smiles = smiles.replace("#","%23")
    smiles = smiles.replace("[","%5B")
    smiles = smiles.replace("]","%5D")
    sdffile = name+".sdf"
    url="https://cactus.nci.nih.gov/chemical/structure/"+smiles+"/sdf"
    subprocess.call(['curl',url, '-o',sdffile])