Skip to content

Instantly share code, notes, and snippets.

@jimallman
Created July 28, 2014 19:48
Show Gist options
  • Star 0 You must be signed in to star a gist
  • Fork 0 You must be signed in to fork a gist
  • Save jimallman/13dbd25a3d8f64df3a97 to your computer and use it in GitHub Desktop.
Save jimallman/13dbd25a3d8f64df3a97 to your computer and use it in GitHub Desktop.
// After unpacking ott2.6, ott2.7, ott2.8 into a common directory...
$ grep -r '\<83477\>' . > 83477.out
$ cat 83477.out
```tsv
./ott2.6/hidden.tsv:83477 Akashiwo sanguinea silva:AB232670,ncbi:143672,gbif:2651853 Alveolata incertae_sedis_inherited
./ott2.6/synonyms.tsv:ncbi:143672 | 83477 | | ncbi:143672 (synonym for Akashiwo sanguinea) |
./ott2.6/synonyms.tsv:Gymnodinium sanguineum | 83477 | | Gymnodinium sanguineum (synonym for Akashiwo sanguinea) |
./ott2.6/synonyms.tsv:Gymnodinium sanguinium | 83477 | | Gymnodinium sanguinium (synonym for Akashiwo sanguinea) |
./ott2.6/taxonomy.tsv:444948 | 444949 | Dibaeis | genus | if:1507,ncbi:83477,gbif:2600356,irmng:1096372 | | |
./ott2.6/taxonomy.tsv:83477 | 930231 | Akashiwo sanguinea | species | silva:AB232670,ncbi:143672,gbif:2651853 | | incertae_sedis_inherited |
./ott2.6/taxonomy.tsv:356805 | 263867 | Rhizobium sp. CCBAU 83477 | species | ncbi:568800 | | sibling_higher,sibling_lower |
./ott2.6/used-but-hidden.tsv:83477 2618 Akashiwo sanguinea silva:AB232670,ncbi:143672,gbif:2651853 Alveolata incertae_sedis_inherited
./ott2.7/hidden.tsv:83477 Akashiwo sanguinea silva:AB232670,ncbi:143672,gbif:3207653 Alveolata incertae_sedis_inherited
./ott2.7/otu_hidden.tsv:83477 2760 Akashiwo sanguinea silva:AB232670,ncbi:143672,gbif:3207653 Alveolata incertae_sedis_inherited
./ott2.7/synonyms.tsv:Gymnodinium nelsonii | 83477 | | Gymnodinium nelsonii (synonym for Akashiwo sanguinea (species in Gymnodiniphycidae)) |
./ott2.7/synonyms.tsv:ncbi:143672 | 83477 | | ncbi:143672 (synonym for Akashiwo sanguinea (species in Gymnodiniphycidae)) |
./ott2.7/synonyms.tsv:Gymnodinium splendens | 83477 | | Gymnodinium splendens (synonym for Akashiwo sanguinea (species in Gymnodiniphycidae)) |
./ott2.7/synonyms.tsv:Gymnodinium sanguineum | 83477 | | Gymnodinium sanguineum (synonym for Akashiwo sanguinea (species in Gymnodiniphycidae)) |
./ott2.7/synonyms.tsv:Gymnodinium sanguinium | 83477 | | Gymnodinium sanguinium (synonym for Akashiwo sanguinea (species in Gymnodiniphycidae)) |
./ott2.7/taxonomy.tsv:356805 | 263867 | Rhizobium sp. CCBAU 83477 | species | ncbi:568800 | | sibling_higher |
./ott2.7/taxonomy.tsv:83477 | 930231 | Akashiwo sanguinea | species | silva:AB232670,ncbi:143672,gbif:3207653 | Akashiwo sanguinea (species in Gymnodiniphycidae) | incertae_sedis_inherited |
./ott2.7/taxonomy.tsv:444948 | 444949 | Dibaeis | genus | if:1507,ncbi:83477,gbif:2600356,irmng:1096372 | | |
./ott2.8/differences.tsv:83477 exposed Akashiwo sanguinea silva:AB232670,ncbi:143672,gbif:3207653
./ott2.8/otu_differences.tsv:83477 2760 exposed Akashiwo sanguinea silva:AB232670,ncbi:143672,gbif:3207653
./ott2.8/synonyms.tsv:Gymnodinium nelsonii | 83477 | | Gymnodinium nelsonii (synonym for Akashiwo sanguinea (species in Gymnodiniphycidae)) |
./ott2.8/synonyms.tsv:ncbi:143672 | 83477 | | ncbi:143672 (synonym for Akashiwo sanguinea (species in Gymnodiniphycidae)) |
./ott2.8/synonyms.tsv:Gymnodinium splendens | 83477 | | Gymnodinium splendens (synonym for Akashiwo sanguinea (species in Gymnodiniphycidae)) |
./ott2.8/synonyms.tsv:Gymnodinium sanguineum | 83477 | | Gymnodinium sanguineum (synonym for Akashiwo sanguinea (species in Gymnodiniphycidae)) |
./ott2.8/synonyms.tsv:Gymnodinium sanguinium | 83477 | | Gymnodinium sanguinium (synonym for Akashiwo sanguinea (species in Gymnodiniphycidae)) |
./ott2.8/taxonomy.tsv:356805 | 263867 | Rhizobium sp. CCBAU 83477 | species | ncbi:568800 | | sibling_higher |
./ott2.8/taxonomy.tsv:444948 | 444949 | Dibaeis | genus | if:1507,ncbi:83477,gbif:2600356,irmng:1096372 | | |
./ott2.8/taxonomy.tsv:83477 | 930231 | Akashiwo sanguinea | species | silva:AB232670,ncbi:143672,gbif:3207653,irmng:11002200 | Akashiwo sanguinea (species in Gymnodiniphycidae) | |
```
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment