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jklymak/Chaining Runs.md

Created September 24, 2021 12:07
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Chaining MITgcm model runs
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Chaining Runs.md 
#!/bin/bash -l
for todo in OneHill100lowU10N10Amp305f141B059Rough
do
    day=86400
    jobid=$(sbatch -J $todo --export=start=0,stop=$((day*6 + 180)),dt=90 runModel.sh)
    #echo $jobid
    jobid1=$(sbatch  -J $todo  --dependency=afterok:${jobid##* } --export=start=$((day*6)),stop=$((day*12 + 180)),dt=90 runModel.sh)
    jobid2=$(sbatch  -J $todo --dependency=afterok:${jobid1##* } --export=start=$((day*12)),stop=$((day*18 + 180)),dt=90 runModel.sh)
    jobid3=$(sbatch  -J $todo --dependency=afterok:${jobid2##* } --export=start=$((day*18)),stop=$((day*24 + 180)),dt=90 runModel.sh)
    #jobid4=$(sbatch  -J $todo --dependency=afterok:${jobid3##* } --export=start=$((day*24)),stop=$((day*30 + 180)),dt=180 runModelRestarts.sh)
    #jobid5=$(sbatch  -J $todo --dependency=afterok:${jobid4##* } --export=start=$((day*30)),stop=$((day*36 + 180)),dt=180 runModelRestarts.sh)
    jobidEnd=$(sbatch  -J $todo --dependency=afterok:${jobid3##* }  ../python/rungetWorkMean.sh)
done
# should add archive step in here once we get going....
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