-
-
Save jmchilton/2d61f7ab81d99a0f02fc to your computer and use it in GitHub Desktop.
fastq_groomer.diff
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
diff --git a/tools/fastq_groomer.xml b/tools/fastq_groomer.xml | |
index 66c0e36..32dd9f4 100644 | |
--- a/tools/fastq_groomer.xml | |
+++ b/tools/fastq_groomer.xml | |
@@ -13,7 +13,7 @@ | |
'ascii' 'summarize_input' | |
#else: | |
'${options_type.output_type}' '${options_type.force_quality_encoding}' '${options_type.summarize_input}' | |
-#end if | |
+#end if ; echo "\$PYTHONPATH" > "\$HOME/groomer_pythonpath" | |
</command> | |
<inputs> | |
<param name="input_file" type="data" format="fastq" label="File to groom" /> |
Sign up for free
to join this conversation on GitHub.
Already have an account?
Sign in to comment