getalleleseq.patch

--- a/getalleleseq.xml  Fri Jul 19 17:49:30 2013 -0400
+++ b/getalleleseq.xml  Mon Mar 17 10:09:45 2014 -0500
@@ -4,7 +4,6 @@
                                    $alleles
                                 -l $seq_length
                                 -j $major_seq
-                                -d $__new_file_path__
                                 -p $major_seq.id
 </command>
   <inputs>