Alyson Petruncio jonesa3
jonesa3
/ combine_labels.py
Created
February 7, 2023 20:02
Combine 8-bit label field tifs into single 16-bit label field tif with unique IDs
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| import tifffile | |
| import numpy as np | |
| for i in range(1,x): | |
| # load image as 16 bit (so that when we add to it, it can go past 255) | |
| # input file name expects end number | |
| # adjust range for number of input files | |
| current_image = tifffile.imread(f"input_file_name_x.tif").astype(np.uint16) | |
| if i==1: |