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josefslerka/Image_Montage.txt

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Image_Montage.txt
// Image Montage v.2
// January 26, 2014
// Developed by Lev Manovich, Matias Giachino, and Jay Chow / softwarestudies.com
// this version:
// 1) user defines width and height of the montage
// 2) scales images vertically to the same size defined by the user - n_width (like in TiffViewer)
// 3) uses the full width of every image (after scaling), aligning them next to each other
// 4) error checking
// 5) 3 levels of label
// 6) color customization
// input; either a folder full of images or a data file containing rows of filenames or filepaths
// for the latter two options, the order of images in the file determines ther position in the montage (left to right, top to bottom)
// if 1, opens gui to edit options in
use_gui = 1;
// if 0, takes files from a folder
// if 1, takes files from a folder and its subfolders
// if 2, takes files from a data file
// if 3, takes files from a data file as full filepaths
input_flag = 3;
input_list = newArray("Folder", "Folder and Subfolders", "Data File", "Data File as Filepaths");
// if 0, make 8-bit grey scale montage
// if 1, make RGB montage
montage_RGB = 1;
montage_RGB_list = newArray("Grayscale","RGB");
// sets the width of the montage canvas
montage_width = 8000;
// sets the height of the montage canvas
montage_height = 8000;
// the height to resize each image to
height_row = 100;
// sets the horizontal space between the images - in pixels
h_interval = 10;
// sets the vertical space between the images - in pixels
v_interval = 10;
// if 1, saves each frame of the montage process into a user-specified directory
save_files_flag = 0;
// the column from which to load the filename/filepath in a data file
input_data_column = 0;
cat_list_flag = 1;
cat_list = newArray("None", "1 Level", "2 Level", "3 Level");
top_cat_data_column = 1;
sec_cat_data_column = 2;
third_cat_data_column = 3;
// Background color
var fill_bg_color = newArray(255,255,255);
var text_color = newArray(110,110,110);
// Category Text Config
top_cat_text_size = 32;
call("java.lang.System.gc");
// Open the GUI if option is active
if(use_gui == 1){
Dialog.create("Image Montage");
Dialog.setInsets(0,0,0);
Dialog.addMessage("Create a montage of images.\nImage sizes can vary.");
Dialog.addMessage(" ");
Dialog.setInsets(0,0,0);
Dialog.addChoice("Image Source ", input_list, input_list[input_flag]);
Dialog.addMessage(" ");
Dialog.setInsets(0,0,0);
Dialog.addMessage("Canvas");
Dialog.setInsets(0,0,0);
Dialog.addChoice("Color Mode",montage_RGB_list,montage_RGB_list[montage_RGB]);
Dialog.addNumber("Set Width ",montage_width,0,5,"px");
Dialog.addNumber("Set Height ",montage_height,0,5,"px");
Dialog.addMessage(" ");
Dialog.setInsets(0,0,0);
Dialog.addMessage("Images");
Dialog.addNumber("Row Height",height_row,0,5,"px");
Dialog.addNumber("X Spacing ",h_interval,0,5,"px");
Dialog.addNumber("Y Spacing ",v_interval,0,5,"px");
Dialog.addMessage(" ");
Dialog.setInsets(0,0,0);
Dialog.addChoice("Number of Labels", cat_list, cat_list[cat_list_flag]);
Dialog.addMessage(" ");
Dialog.setInsets(0,0,0);
Dialog.addMessage("Labels");
Dialog.addNumber("Set Text Size",top_cat_text_size,0,5,"pt");
Dialog.addMessage(" ");
Dialog.setInsets(0,0,0);
Dialog.addMessage("Text Color");
Dialog.addSlider ("R", 0, 255, text_color[0]);
Dialog.addSlider ("G", 0, 255, text_color[1]);
Dialog.addSlider ("B", 0, 255, text_color[2]);
Dialog.addMessage(" ");
Dialog.setInsets(0,0,0);
Dialog.addMessage("Background Color");
Dialog.addSlider ("R", 0, 255, fill_bg_color[0]);
Dialog.addSlider ("G", 0, 255, fill_bg_color[1]);
Dialog.addSlider ("B", 0, 255, fill_bg_color[2]);
Dialog.addMessage(" ");
Dialog.setInsets(0,0,0);
Dialog.addMessage("Animation");
Dialog.setInsets(0,20,0);
Dialog.addCheckbox("Save Images for Animation", save_files_flag);
Dialog.show();
// Fetch choices
input_flag_choice = Dialog.getChoice();
for(i=0; i<input_list.length; i++){
if(input_list[i] == input_flag_choice){
input_flag = i;
i = 999;
}
}
montage_RGB_choice = Dialog.getChoice();
for(i=0; i<montage_RGB_list.length; i++){
if(montage_RGB_list[i] == montage_RGB_choice){
montage_RGB = i;
i = 999;
}
}
cat_label_choice = Dialog.getChoice();
for(i=0; i<cat_list.length;i++){
if(cat_list[i] == cat_label_choice){
cat_list_flag = i;
i = 999;
}
}
montage_width = Dialog.getNumber();
montage_height = Dialog.getNumber();
height_row = Dialog.getNumber();
h_interval = Dialog.getNumber();
v_interval = Dialog.getNumber();
top_cat_text_size = Dialog.getNumber();
//get text color
text_color[0] = Dialog.getNumber();
text_color[1] = Dialog.getNumber();
text_color[2] = Dialog.getNumber();
//get background color
fill_bg_color[0] = Dialog.getNumber();
fill_bg_color[1] = Dialog.getNumber();
fill_bg_color[2] = Dialog.getNumber();
save_files_flag = Dialog.getCheckbox() & 1;
}
setBatchMode(false);
scaled_height = height_row;
var count = 0;
var path = "";
var image_dir = "";
if(input_flag != 3){
dir = getDirectory("Choose source directory - images");
image_dir = dir;
print(image_dir);
}
if(save_files_flag == 1){
dir_anim = getDirectory("Directory to save files for animation");
}
if(input_flag == 0 || input_flag == 1){
list = getFileList(dir);
countFiles(dir);
}else if(input_flag == 2 || input_flag == 3){
input_file = File.openAsString("");
dir = getDirectory("current");
list = split(input_file, "\n");
top_cat_list=split(input_file, "\n");
sec_cat_list=split(input_file, "\n");
third_cat_list=split(input_file, "\n");
labels=split(list[0],"\t");
for(i=0;i<labels.length;i++){
labels[i] = labels[i] + " (Column"+i+")";
}
if(use_gui == 1){
Dialog.create("Data File");
Dialog.setInsets(0,0,0);
if(input_flag == 2){
Dialog.addMessage ("Choose the column that contains filenames:");
}else if(input_flag == 3){
Dialog.addMessage ("Choose the column that contains filepaths:");
}
Dialog.addMessage(" ");
Dialog.setInsets(0,0,0);
if(input_flag == 2){
if(cat_list_flag == 0){
Dialog.addChoice("Image Filepaths",labels,labels[input_data_column]);
}else if(cat_list_flag == 1){
Dialog.addChoice("Image Filepaths",labels,labels[input_data_column]);
Dialog.addChoice("Top Level Category Labels",labels,labels[top_cat_data_column]);
}else if(cat_list_flag == 2){
Dialog.addChoice("Image Filepaths",labels,labels[input_data_column]);
Dialog.addChoice("Top Level Category Labels",labels,labels[top_cat_data_column]);
Dialog.addChoice("Second Level Category Labels", labels, labels[sec_cat_data_column]);
}else if(cat_list_flag == 3){
Dialog.addChoice("Image Filepaths",labels,labels[input_data_column]);
Dialog.addChoice("Top Level Category Labels",labels,labels[top_cat_data_column]);
Dialog.addChoice("Second Level Category Labels", labels, labels[sec_cat_data_column]);
Dialog.addChoice("Third Level Category Labels", labels, labels[third_cat_data_column]);
}
}else if(input_flag == 3){
if(cat_list_flag == 0){
Dialog.addChoice("Image Filepaths",labels,labels[input_data_column]);
}else if(cat_list_flag == 1){
Dialog.addChoice("Image Filepaths",labels,labels[input_data_column]);
Dialog.addChoice("Top Level Category Labels",labels,labels[top_cat_data_column]);
}else if(cat_list_flag == 2){
Dialog.addChoice("Image Filepaths",labels,labels[input_data_column]);
Dialog.addChoice("Top Level Category Labels",labels,labels[top_cat_data_column]);
Dialog.addChoice("Second Level Category Labels", labels, labels[sec_cat_data_column]);
}else if(cat_list_flag == 3){
Dialog.addChoice("Image Filepaths",labels,labels[input_data_column]);
Dialog.addChoice("Top Level Category Labels",labels,labels[top_cat_data_column]);
Dialog.addChoice("Second Level Category Labels", labels, labels[sec_cat_data_column]);
Dialog.addChoice("Third Level Category Labels", labels, labels[third_cat_data_column]);
}
}
Dialog.show();
print("cat_list_flag: " + cat_list_flag);
if(cat_list_flag == 0){
column_choice = Dialog.getChoice();
for(i=0; i<labels.length; i++){
if(labels[i] == column_choice){
input_data_column = i;
}
i = 999;
}
print("column_choice: " + column_choice);
for (i=1; i<list.length; i++) {
list[i]=replace(list[i],'"','');
columns = split(list[i],"\t");
list[i-1] = columns[input_data_column];
if (endsWith(list[i-1], ".jpg") || endsWith(list[i-1],".png")) {
count++;
}
}
}else if(cat_list_flag == 1){
column_choice = Dialog.getChoice();
top_cat_choice = Dialog.getChoice();
print(column_choice);
print(top_cat_choice);
for(i=0; i<labels.length; i++){
if(labels[i] == column_choice){
input_data_column = i;
}
if(labels[i] == top_cat_choice){
top_cat_data_column = i;
}
}
print("column_choice: " + column_choice);
print("input_column: " + input_data_column);
print("top_cat_choice: " + top_cat_choice);
print("top_cat_data_column: " + top_cat_data_column);
for (i=1; i<list.length; i++) {
list[i]=replace(list[i],'"','');
columns = split(list[i],"\t");
list[i-1] = columns[input_data_column];
top_cat_list[i-1] = columns[top_cat_data_column];
if (endsWith(list[i-1], ".jpg") || endsWith(list[i-1],".png")) {
count++;
}
}
}else if(cat_list_flag == 2){
column_choice = Dialog.getChoice();
top_cat_choice = Dialog.getChoice();
sec_cat_choice = Dialog.getChoice();
for(i=0; i<labels.length; i++){
if(labels[i] == column_choice){
input_data_column = i;
}
if(labels[i] == top_cat_choice){
top_cat_data_column = i;
}
if(labels[i] == sec_cat_choice){
sec_cat_data_column = i;
}
}
print("column_choice: " + column_choice);
print("top_cat_choice: " + top_cat_choice);
print("sec_cat_choice: " + sec_cat_choice);
for (i=1; i<list.length; i++) {
list[i]=replace(list[i],'"','');
columns = split(list[i],"\t");
list[i-1] = columns[input_data_column];
top_cat_list[i-1] = columns[top_cat_data_column];
sec_cat_list[i-1] = columns[sec_cat_data_column];
if (endsWith(list[i-1], ".jpg") || endsWith(list[i-1],".png")) {
count++;
}
}
}else if(cat_list_flag == 3){
column_choice = Dialog.getChoice();
top_cat_choice = Dialog.getChoice();
sec_cat_choice = Dialog.getChoice();
third_cat_choice = Dialog.getChoice();
for(i=0; i<labels.length; i++){
if(labels[i] == column_choice){
input_data_column = i;
}
if(labels[i] == top_cat_choice){
top_cat_data_column = i;
}
if(labels[i] == sec_cat_choice){
sec_cat_data_column = i;
}
if(labels[i] == third_cat_choice){
third_cat_data_column=i;
}
}
print("column_choice: " + column_choice);
print("top_cat_choice: " + top_cat_choice);
print("sec_cat_choice: " + sec_cat_choice);
print("third_cat_choice: " + third_cat_choice);
for (i=1; i<list.length; i++) {
list[i]=replace(list[i],'"','');
columns = split(list[i],"\t");
list[i-1] = columns[input_data_column];
top_cat_list[i-1] = columns[top_cat_data_column];
sec_cat_list[i-1] = columns[sec_cat_data_column];
third_cat_list[i-1] = columns[third_cat_data_column];
if (endsWith(list[i-1], ".jpg") || endsWith(list[i-1],".png")) {
count++;
}
}
}
}
if(input_flag == 2){
path = image_dir+list[1];
}else if(input_flag == 3){
path = list[1];
}
}
// For input_flag 0 and 1
function countFiles(dir) {
list = getFileList(dir);
for (i=0; i<list.length; i++) {
if (input_flag == 1 && endsWith(list[i], "/")){
countFiles(""+dir+list[i]);
}else if(endsWith(list[i], ".jpg") || endsWith(list[i],".png")) {
count++;
}
}
}
print("Montage width = " + montage_width);
print("Montage height = " + montage_height);
print("Number of images = " + count);
if (montage_RGB == 1){
newImage("montage", "RGB white", montage_width, montage_height, 1);
setColor(fill_bg_color[0], fill_bg_color[1], fill_bg_color[2]);
fill();
}else{
newImage("montage", "8-bit white", montage_width, montage_height, 1);
}
id_plot=getImageID;
var img_width = 0;
var img_height = 0;
var start_x = 0;
var start_y = 0;
var row = 0;
var total_x_width = 0;
var n_width=0;
var curImg = 0;
setBatchMode(true);
var temptopcat="";
var tempseccat="";
var tempthirdcat="";
// Begin parsing files
if( input_flag == 0 || input_flag == 2 || input_flag == 3){
for(j=0; j<list.length; j++){
if(endsWith(list[j],".jpg") || endsWith(list[j],".png")){
if(input_flag == 3){
if(j<1){
if(cat_list_flag == 0){
if(File.exists(list[j])){
processFile(list[j],list[j]);
}else{
print(list[j] + " File not found.");
}
}
else if(cat_list_flag == 1){
if(File.exists(list[j])){
processFile1(list[j],list[j], top_cat_list[j],top_cat_list[j]);
}else{
print(list[j] + " File not found.");
}
temptopcat = top_cat_list[j];
}
else if(cat_list_flag == 2){
if(File.exists(list[j])){
processFile2(list[j],list[j], top_cat_list[j],top_cat_list[j], sec_cat_list[j],sec_cat_list[j]);
}else{
print(list[j] + " File not found.");
}
temptopcat = top_cat_list[j];
tempseccat = sec_cat_list[j];
}
else if(cat_list_flag == 3){
if(File.exists(list[j])){
processFile3(list[j],list[j], top_cat_list[j],top_cat_list[j], sec_cat_list[j],sec_cat_list[j],third_cat_list[j],third_cat_list[j]);
}else{
print(dir+list[j] + " File not found.");
}
temptopcat = top_cat_list[j];
tempseccat = sec_cat_list[j];
tempthirdcat = third_cat_list[j];
}
}else{
if(cat_list_flag == 0){
if(File.exists(list[j])){
processFile(list[j],list[j]);
}
}
else if(cat_list_flag == 1){
if(File.exists(list[j])){
processFile1(list[j],list[j], top_cat_list[j],temptopcat);
}else{
print(list[j] + " File not found.");
}
temptopcat = top_cat_list[j];
}
else if(cat_list_flag == 2){
if(File.exists(list[j])){
processFile2(list[j],list[j], top_cat_list[j],temptopcat,sec_cat_list[j],tempseccat);
}else{
print(list[j] + " File not found.");
}
temptopcat = top_cat_list[j];
tempseccat = sec_cat_list[j];
}
else if(cat_list_flag == 3){
if(File.exists(list[j])){
processFile3(list[j],list[j], top_cat_list[j],temptopcat,sec_cat_list[j],tempseccat,third_cat_list[j],tempthirdcat);
}else{
print(list[j] + " File not found.");
}
temptopcat = top_cat_list[j];
tempseccat = sec_cat_list[j];
tempthirdcat = third_cat_list[j];
}
}
}
else if(input_flag == 2){
dir = image_dir;
if(j<1){
if(cat_list_flag == 0){
if(File.exists(dir+list[j])){
processFile(dir+list[j],dir+list[j]);
}else{
print(dir+list[j] + " File not found.");
}
}
else if(cat_list_flag == 1){
if(File.exists(dir+list[j])){
path = dir+list[j];
processFile1(path, path, top_cat_list[j],top_cat_list[j]);
}else{
print(dir+list[j] + " File not found.");
}
temptopcat = top_cat_list[j];
}
else if(cat_list_flag == 2){
path = dir+list[j];
if(File.exists(path)){
processFile2(path,path, top_cat_list[j],top_cat_list[j], sec_cat_list[j],sec_cat_list[j]);
}else{
print(path + " File not found.");
}
temptopcat = top_cat_list[j];
tempseccat = sec_cat_list[j];
}
else if(cat_list_flag == 3){
path = dir+list[j];
if(File.exists(path)){
processFile3(path,path, top_cat_list[j],top_cat_list[j], sec_cat_list[j],sec_cat_list[j],third_cat_list[j],third_cat_list[j]);
}else{
print(path + " File not found.");
}
temptopcat = top_cat_list[j];
tempseccat = sec_cat_list[j];
tempthirdcat = third_cat_list[j];
}
} else{
if(cat_list_flag == 0){
if(File.exists(dir+list[j])){
processFile(dir+list[j],dir+list[j]);
}
}
else if(cat_list_flag == 1){
if(File.exists(dir+list[j])){
path = dir+list[j];
processFile1(path, path, top_cat_list[j],top_cat_list[j]);
}else{
print(dir+list[j] + " File not found.");
}
temptopcat = top_cat_list[j];
}
else if(cat_list_flag == 2){
path = dir+list[j];
if(File.exists(path)){
processFile2(path,path, top_cat_list[j],temptopcat,sec_cat_list[j],tempseccat);
}else{
print(path + " File not found.");
}
temptopcat = top_cat_list[j];
tempseccat = sec_cat_list[j];
}
else if(cat_list_flag == 3){
path = dir+list[j];
if(File.exists(path)){
processFile3(path,path, top_cat_list[j],temptopcat,sec_cat_list[j],tempseccat,third_cat_list[j],tempthirdcat);
}else{
print(path + " File not found.");
}
temptopcat = top_cat_list[j];
tempseccat = sec_cat_list[j];
tempthirdcat = third_cat_list[j];
}
}
}
else{
processFile(""+image_dir+list[j],list[j]);
}
}
}
}else if(input_flag == 1){
processRecursiveFiles(dir);
}
function processRecursiveFiles(dir){
list = getFileList(dir);
for (i=0; i<list.length; i++) {
if (endsWith(list[i], "/")){
processRecursiveFiles(""+dir+list[i]);
}else if (endsWith(list[i], ".jpg")) {
processFile(""+dir+list[i], list[i]);
}
}
}
var processcount=0;
function processFile(path,listi){
// Check for row overflow, start new row if needed
if ((total_x_width + n_width) > montage_width) {
// increment row
row = row + 1;
// reset column
start_x = 0;
// reset total row width
total_x_width = 0;
}
open(path);
id=getImageID;
img_width = getWidth;
img_height = getHeight;
n_width = round((img_width * scaled_height)/img_height);
run("Size...", "width=" + n_width + " height=" + scaled_height + " average interpolation=Bicubic");
// get image width and height after it was scaled
n_width = getWidth;
n_height = getHeight;
start_x = total_x_width;
start_y = row * (height_row + v_interval) + v_interval;
run("Select All");
run("Copy");
selectImage(id_plot);
makeRectangle(start_x, start_y, n_width, n_height);
run("Paste");
selectImage(id);
close();
// update display
updateDisplay();
total_x_width = total_x_width + n_width + h_interval;
if (save_files_flag == 1) {
selectImage(id_plot);
path_files = dir_anim + "frame_" + curImg;
saveAs("PNG", path_files);
print("image " + curImg + " saved");
}
curImg++;
showProgress(curImg, count);
}
function processFile1(path,listi,currtopcat, oldtopcat){
setColor(text_color[0], text_color[1], text_color[2]);
//calculate text offset
top_cat_text_offset = height_row*1.05;
if(processcount<1){
//draw First category Top Level Label
// increment row
//row = row + 1;
// reset column
start_x = 0;
// reset total row width
total_x_width = 0;
setFont("Helvetica", top_cat_text_size, "bold, antiliased");
start_text_x = start_x;
start_text_y = row * (height_row + v_interval) + v_interval + top_cat_text_offset;
drawString(currtopcat+" ", start_text_x, start_text_y);
topcatwidth = getStringWidth(currtopcat+" ");
row = row + 1;
processcount++;
}
if(currtopcat != oldtopcat){
// increment row
row = row + 1;
// reset column
start_x = 0;
// reset total row width
total_x_width = 0;
setFont("Helvetica", top_cat_text_size, "bold, antiliased");
start_text_x = start_x;
start_text_y = row * (height_row + v_interval) + v_interval + top_cat_text_offset;
drawString(currtopcat+" ", start_text_x, start_text_y);
topcatwidth = getStringWidth(currtopcat+" ");
row = row + 1;
}
// Check for row overflow, start new row if needed
if ((total_x_width + n_width) > montage_width) {
// increment row
row = row + 1;
// reset column
start_x = 0;
// reset total row width
total_x_width = 0;
}
print(path);
open(path);
id=getImageID;
img_width = getWidth;
img_height = getHeight;
n_width = round((img_width * scaled_height)/img_height);
run("Size...", "width=" + n_width + " height=" + scaled_height + " average interpolation=Bicubic");
// get image width and height after it was scaled
n_width = getWidth;
n_height = getHeight;
start_x = total_x_width;
start_y = row * (height_row + v_interval) + v_interval;
run("Select All");
run("Copy");
selectImage(id_plot);
makeRectangle(start_x, start_y, n_width, n_height);
run("Paste");
selectImage(id);
close();
// update display
updateDisplay();
total_x_width = total_x_width + n_width + h_interval;
if (save_files_flag == 1) {
selectImage(id_plot);
path_files = dir_anim + "frame_" + curImg;
saveAs("PNG", path_files);
print("image " + curImg + " saved");
}
curImg++;
showProgress(curImg, count);
}
function processFile2(path,listi,currtopcat, oldtopcat, currseccat, oldseccat){
setColor(text_color[0], text_color[1], text_color[2]);
//calculate text size
sec_cat_text_size = top_cat_text_size*0.5;
//calculate text offset
top_cat_text_offset = height_row *1.2;
sec_cat_text_offset = height_row;
if(processcount<1){
//draw First category Top Level Label
// increment row
//row = row + 1;
// reset column
start_x = 0;
// reset total row width
total_x_width = 0;
setFont("Helvetica", top_cat_text_size, "bold, antiliased");
start_text_x = start_x;
start_text_y = row * (height_row + v_interval) + v_interval + top_cat_text_offset;
drawString(currtopcat, start_text_x, start_text_y);
row = row + 1;
//draw First category Second Level Label
// increment row
//row = row + 1;
// reset column
start_x = 0;
// reset total row width
total_x_width = 0;
if(currseccat == " "){
row = row - 1;
}
setFont("Helvetica", sec_cat_text_size, "bold, antiliased");
start_text_x = start_x;
start_text_y = row * (height_row + v_interval) + v_interval + sec_cat_text_offset;
drawString(currseccat, start_text_x, start_text_y);
row = row + 1;
processcount++;
}
if(currtopcat != oldtopcat){
// increment row
row = row + 1;
// reset column
start_x = 0;
// reset total row width
total_x_width = 0;
setFont("Helvetica", top_cat_text_size, "bold, antiliased");
start_text_x = start_x;
start_text_y = row * (height_row + v_interval) + v_interval + top_cat_text_offset;
drawString(currtopcat, start_text_x, start_text_y);
}
if(currseccat != oldseccat || currtopcat != oldtopcat){
if(currseccat == " "){
row = row - 1;
}
// increment row
row = row + 1;
// reset column
start_x = 0;
// reset total row width
total_x_width = 0;
setFont("Helvetica", sec_cat_text_size, "bold, antiliased");
start_text_x = start_x;
start_text_y = row * (height_row + v_interval) + v_interval + sec_cat_text_offset;
drawString(currseccat, start_text_x, start_text_y);
row = row + 1;
}
// Check for row overflow, start new row if needed
if ((total_x_width + n_width) > montage_width) {
// increment row
row = row + 1;
// reset column
start_x = 0;
// reset total row width
total_x_width = 0;
}
open(path);
id=getImageID;
img_width = getWidth;
img_height = getHeight;
n_width = round((img_width * scaled_height)/img_height);
run("Size...", "width=" + n_width + " height=" + scaled_height + " average interpolation=Bicubic");
// get image width and height after it was scaled
n_width = getWidth;
n_height = getHeight;
start_x = total_x_width;
start_y = row * (height_row + v_interval) + v_interval;
run("Select All");
run("Copy");
selectImage(id_plot);
makeRectangle(start_x, start_y, n_width, n_height);
run("Paste");
selectImage(id);
close();
// update display
updateDisplay();
total_x_width = total_x_width + n_width + h_interval;
if (save_files_flag == 1) {
selectImage(id_plot);
path_files = dir_anim + "frame_" + curImg;
saveAs("PNG", path_files);
print("image " + curImg + " saved");
}
curImg++;
showProgress(curImg, count);
}
function processFile3(path,listi,currtopcat, oldtopcat, currseccat, oldseccat, currthirdcat, oldthirdcat){
setColor(text_color[0], text_color[1], text_color[2]);
//calculate text size
sec_cat_text_size = top_cat_text_size*0.75;
third_cat_text_size = top_cat_text_size*0.50;
//calculate text offset
top_cat_text_offset = height_row*1.3;
sec_cat_text_offset = height_row*1.4;
third_cat_text_offset = height_row;
//draw First category Top Level Label
if(currseccat == " "){
top_cat_text_offset = height_row;
}
if(currthirdcat == " "){
sec_cat_text_offset = height_row*1.05;
}
if(processcount<1){
// increment row
//row = row + 1;
// reset column
start_x = 0;
// reset total row width
total_x_width = 0;
setFont("Helvetica", top_cat_text_size, "bold, antiliased");
start_text_x = start_x;
start_text_y = row * (height_row + v_interval) + v_interval + top_cat_text_offset;
drawString(currtopcat, start_text_x, start_text_y);
row = row + 1;
//draw First category Second Level Label
// increment row
//row = row + 1;
// reset column
start_x = 0;
// reset total row width
total_x_width = 0;
setFont("Helvetica", sec_cat_text_size, "bold, antiliased");
start_text_x = start_x;
start_text_y = row * (height_row + v_interval) + v_interval + sec_cat_text_offset - getValue("font.height");
if(currseccat == " "){
row = row - 1;
}
drawString(currseccat, start_text_x, start_text_y);
//draw First category Third Level Label
// increment row
row = row + 1;
// reset column
start_x = 0;
// reset total row width
total_x_width = 0;
setFont("Helvetica", third_cat_text_size, "bold, antiliased");
start_text_x = start_x;
start_text_y = row * (height_row + v_interval) + v_interval + third_cat_text_offset;
drawString(currthirdcat, start_text_x, start_text_y);
if(currthirdcat == " "){
row = row - 1;
}
row= row + 1;
processcount++;
}
if(currtopcat != oldtopcat){
// increment row
row = row + 1;
// reset column
start_x = 0;
// reset total row width
total_x_width = 0;
setFont("Helvetica", top_cat_text_size, "bold, antiliased");
start_text_x = start_x;
start_text_y = row * (height_row + v_interval) + v_interval + top_cat_text_offset;
drawString(currtopcat, start_text_x, start_text_y);
}
if(currseccat != oldseccat || currtopcat != oldtopcat){
if(currseccat == " "){
row = row - 1;
}
// increment row
row = row + 1;
// reset column
start_x = 0;
// reset total row width
total_x_width = 0;
setFont("Helvetica", sec_cat_text_size, "bold, antiliased");
start_text_x = start_x;
start_text_y = row * (height_row + v_interval) + v_interval + sec_cat_text_offset;
drawString(currseccat, start_text_x, start_text_y);
}
if(currthirdcat != oldthirdcat || currseccat != oldseccat || currtopcat != oldtopcat){
if(currthirdcat == " "){
row = row - 1;
}
// increment row
row = row + 1;
// reset column
start_x = 0;
// reset total row width
total_x_width = 0;
setFont("Helvetica", third_cat_text_size, "bold, antiliased");
start_text_x = start_x;
start_text_y = row * (height_row + v_interval) + v_interval + third_cat_text_offset;
drawString(currthirdcat, start_text_x, start_text_y);
row = row + 1;
}
// Check for row overflow, start new row if needed
if ((total_x_width + n_width) > montage_width) {
// increment row
row = row + 1;
// reset column
start_x = 0;
// reset total row width
total_x_width = 0;
}
open(path);
id=getImageID;
img_width = getWidth;
img_height = getHeight;
n_width = round((img_width * scaled_height)/img_height);
run("Size...", "width=" + n_width + " height=" + scaled_height + " average interpolation=Bicubic");
// get image width and height after it was scaled
n_width = getWidth;
n_height = getHeight;
start_x = total_x_width;
start_y = row * (height_row + v_interval) + v_interval;
run("Select All");
run("Copy");
selectImage(id_plot);
makeRectangle(start_x, start_y, n_width, n_height);
run("Paste");
selectImage(id);
close();
// update display
updateDisplay();
total_x_width = total_x_width + n_width + h_interval;
if (save_files_flag == 1) {
selectImage(id_plot);
path_files = dir_anim + "frame_" + curImg;
saveAs("PNG", path_files);
print("image " + curImg + " saved");
}
curImg++;
showProgress(curImg, count);
}
run("Select None");
setBatchMode(false);
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