IDR Java Example

Dockerfile.java

FROM java:8-jdk

ENV OMERO_URL https://downloads.openmicroscopy.org/omero/5.3.2/artifacts/OMERO.java-5.3.2-ice36-b62.zip

RUN curl -A Docker "$OMERO_URL" > /tmp/omero.zip \
 && unzip -qd /opt /tmp/omero.zip \
 && ln -s /opt/OMERO.java* /opt/omero \
 && test -e /opt/omero \
 && rm /tmp/omero.zip

RUN useradd -m -s /bin/bash omero
USER omero
WORKDIR /home/omero

ENV ICE_CONFIG /home/omero/ice.config
COPY ice.config $ICE_CONFIG
COPY Main.java /home/omero/Main.java
RUN javac -cp "/opt/omero/libs/*" Main.java
ENTRYPOINT ["java", "-cp", ".:/opt/omero/libs/*", "Main"]

ice.config

omero.host=cytohack.openmicroscopy.org
omero.user=public
omero.pass=public

Main.java

public class Main {

    public static void main(String args[]) throws Exception {
        omero.client client = new omero.client();
        client.createSession();
        try {
            // pass
        } finally {
            System.out.println("Closing " + client.getSession());
            client.closeSession();
        }
    }

}