Skip to content

Instantly share code, notes, and snippets.

@joshmoore
Created June 29, 2017 10:33
Show Gist options
  • Star 0 You must be signed in to star a gist
  • Fork 0 You must be signed in to fork a gist
  • Save joshmoore/97120daee8abb2080ab8d80a38e86825 to your computer and use it in GitHub Desktop.
Save joshmoore/97120daee8abb2080ab8d80a38e86825 to your computer and use it in GitHub Desktop.
Compound query
import omero
compounds = unwrap(q.projection(("select distinct mv1.value, mv2.value from Image i "
"join i.annotationLinks l1 join l1.child as a1 join a1.mapValue as mv1 "
"join i.annotationLinks l2 join l2.child as a2 join a2.mapValue as mv2 "
"join i.wellSamples ws join ws.well w join w.plate p "
"where p.id = 4403 and mv1.name = 'Product Use Annotation' and mv2.name = 'Compound Name'"), None))
Nalidixic acid sodium salt hydrate UseClass:8104 (anti-bacterial)
WY-14643 UseClass:8089 (cardiovascular agent)
N-LINOLEOYLGLYCINE UseClass:8071 (anti-inflammatory)
Amitryptiline hydrochloride UseClass:8119 (anti-depressant)
Tolazoline hydrochloride UseClass:8092 (vasodilator)
Mycophenolic acid UseClass:8071 (anti-inflammatory);UseClass:8066 (anti-neoplastic);UseClass:8108 (anti-protozoal);UseClass:8076 (anti-psoriatic);UseClass:8070 (immunosuppressive agent)
Nalbuphine hydrochloride UseClass:8081 (analgesic)
Astemizole UseClass:8072 (anti-histamine)
Berberine chloride UseClass:8090 (anti-arrhythmic)
Amoxapine UseClass:8119 (anti-depressant);UseClass:8072 (anti-histamine)
Tamoxifen citrate UseClass:8144 (hormone antagonist)
Ciprofloxacin hydrochloride UseClass:8104 (anti-bacterial);UseClass:8111 (antiseptic)
DL-PDMP UseClass:8066 (anti-neoplastic);UseClass:8065 (anti-proliferative)
FLUNARIZINE UseClass:8114 (neuroprotective agent);UseClass:8092 (vasodilator)
MEAD ACID (20:3 n-9) UseClass:8071 (anti-inflammatory);UseClass:8073 (immunomodulator)
Eburnamonine (-) UseClass:8092 (vasodilator)
Carbamazepine UseClass:8121 (anti-convulsant)
Pirenzepine dihydrochloride UseClass:8125 (gastrointestinal agent)
Mefloquine hydrochloride UseClass:8110 (anti-malarial)
Khellin UseClass:8100 (cardiac stimulant);UseClass:8132 (muscle relaxant (spasmolytic))
Hesperetin UseClass:8066 (anti-neoplastic);UseClass:8132 (muscle relaxant (spasmolytic))
LIDOCAINE UseClass:8082 (anesthetic);UseClass:8090 (anti-arrhythmic)
Papaverine hydrochloride UseClass:8095 (anti-anginal);UseClass:8078 (anti-asthmatic);UseClass:8106 (anti-viral);UseClass:8133 (smooth muscle relaxant);UseClass:8092 (vasodilator)
Terfenadine UseClass:8072 (anti-histamine);UseClass:8088 (bronchodilator)
GAMMA-LINOLENIC ACID (18:3 n-6) UseClass:8066 (anti-neoplastic)
BAY K-8644 UseClass:8094 (vasoconstrictor)
Cotinine (-) UseClass:8119 (anti-depressant)
Galanthamine hydrobromide UseClass:8081 (analgesic)
Harmalol hydrochloride dihydrate UseClass:8113 (cns agent)
CYCLOTHIAZIDE UseClass:8091 (anti-hypertensive);UseClass:8153 (diuretic)
Chlorpheniramine maleate UseClass:8072 (anti-histamine)
bumetanide UseClass:8153 (diuretic)
Phenacetin UseClass:8075 (anti-pyretic)
Azathioprine UseClass:8070 (immunosuppressive agent)
Todralazine hydrochloride UseClass:8091 (anti-hypertensive)
Trimethobenzamide hydrochloride UseClass:8127 (anti-emetic)
PROSTAGLANDIN A2 UseClass:8066 (anti-neoplastic)
Ticlopidine hydrochloride UseClass:8089 (cardiovascular agent)
Minaprine dihydrochloride UseClass:8114 (neuroprotective agent);UseClass:8120 (psychotropic agent)
6-Furfurylaminopurine UseClass:8147 (auxin)
Riluzole hydrochloride UseClass:8082 (anesthetic);UseClass:8123 (anti-anxiety);UseClass:8121 (anti-convulsant);UseClass:8099 (anti-ischemic);UseClass:8115 (hypnotic);UseClass:8120 (psychotropic agent)
OXYMETAZOLINE UseClass:8084 (decongestant);UseClass:8094 (vasoconstrictor)
Naloxone hydrochloride UseClass:8155 (antidote)
Nomifensine maleate UseClass:8119 (anti-depressant)
FLECAINIDE UseClass:8090 (anti-arrhythmic)
GLYBURIDE UseClass:8094 (vasoconstrictor)
Paclitaxel UseClass:8066 (anti-neoplastic)
Pargyline hydrochloride UseClass:8119 (anti-depressant)
Mefenamic acid UseClass:8071 (anti-inflammatory)
clonidine UseClass:8091 (anti-hypertensive)
Verapamyl hydrochloride UseClass:8090 (anti-arrhythmic);UseClass:8091 (anti-hypertensive);UseClass:8092 (vasodilator)
BAY 11-7082 UseClass:8071 (anti-inflammatory)
FLUFENAMIC ACID UseClass:8081 (analgesic);UseClass:8071 (anti-inflammatory);UseClass:8065 (anti-proliferative)
Tolnaftate UseClass:8105 (anti-fungal)
Cyclizine hydrochloride UseClass:8081 (analgesic);UseClass:8072 (anti-histamine)
Mepenzolate bromide UseClass:8113 (cns agent)
Mianserine hydrochloride UseClass:8119 (anti-depressant);UseClass:8072 (anti-histamine)
Chlorzoxazone UseClass:8132 (muscle relaxant (spasmolytic))
Flutamide UseClass:8144 (hormone antagonist)
Tiabendazole UseClass:8105 (anti-fungal);UseClass:8109 (anti-helminthic);UseClass:8065 (anti-proliferative);UseClass:8108 (anti-protozoal)
Diclofenac sodium UseClass:8071 (anti-inflammatory)
Cloxacillin sodium salt UseClass:8104 (anti-bacterial)
Methocarbamol UseClass:8132 (muscle relaxant (spasmolytic))
Diphenhydramine hydrochloride UseClass:8072 (anti-histamine)
Monocrotaline UseClass:8066 (anti-neoplastic)
IBMX UseClass:8092 (vasodilator)
Ethosuximide UseClass:8121 (anti-convulsant)
Alverine citrate salt UseClass:8132 (muscle relaxant (spasmolytic))
Betahistine mesylate UseClass:8092 (vasodilator)
Iproniazide phosphate UseClass:8119 (anti-depressant)
Sulfamethoxazole UseClass:8104 (anti-bacterial)
Tenoxicam UseClass:8081 (analgesic);UseClass:8071 (anti-inflammatory)
NICARDIPINE UseClass:8092 (vasodilator)
Tetracaine hydrochloride UseClass:8082 (anesthetic)
TROPISETRON UseClass:8125 (gastrointestinal agent)
Sulindac UseClass:8081 (analgesic);UseClass:8071 (anti-inflammatory);UseClass:8075 (anti-pyretic)
Suxibuzone UseClass:8081 (analgesic);UseClass:8071 (anti-inflammatory);UseClass:8075 (anti-pyretic)
PROSTAGLANDIN A1 UseClass:8066 (anti-neoplastic)
zaprinast UseClass:8077 (anti-allergy);UseClass:8078 (anti-asthmatic)
Pheniramine maleate UseClass:8072 (anti-histamine)
NIFLUMIC ACID UseClass:8081 (analgesic);UseClass:8071 (anti-inflammatory)
Ebselen UseClass:8071 (anti-inflammatory);UseClass:8137 (anti-oxidant)
Metolazone UseClass:8153 (diuretic)
Xylazine UseClass:8081 (analgesic);UseClass:8132 (muscle relaxant (spasmolytic));UseClass:8116 (sedative)
DIAZOXIDE UseClass:8092 (vasodilator)
LY-83583 UseClass:8073 (immunomodulator)
BUSPIRONE UseClass:8123 (anti-anxiety);UseClass:8118 (anti-psychotic (neuroleptic));UseClass:8117 (tranquilizer)
Lidocaine hydrochloride UseClass:8082 (anesthetic);UseClass:8090 (anti-arrhythmic)
Etofylline UseClass:8155 (antidote)
Quercetine dihydrate UseClass:8071 (anti-inflammatory);UseClass:8066 (anti-neoplastic);UseClass:8138 (flavonoid);UseClass:8136 (vitamin)
Oxethazaine UseClass:8082 (anesthetic)
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment